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ONTOLOGY REPORT - ANNOTATIONS


Term:dermatan sulfate biosynthetic process
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Accession:GO:0030208 term browser browse the term
Definition:The chemical reactions and pathways resulting in the formation of dermatan sulfate, any glycosaminoglycan with repeats consisting of beta-(1,4)-linked L-iduronyl-beta-(1,3)-N-acetyl-D-galactosamine 4-sulfate units.
Synonyms:exact_synonym: chondroitin sulfate B biosynthesis;   chondroitin sulfate B biosynthetic process;   dermatan sulfate anabolism;   dermatan sulfate biosynthesis;   dermatan sulfate formation;   dermatan sulfate synthesis;   dermatan sulphate biosynthesis;   dermatan sulphate biosynthetic process


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dermatan sulfate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BCAN brevican involved_in TAS Reactome Reactome:R-HSA-2022923 NCBI chr 1:156,642,117...156,659,528
Ensembl chr 1:156,641,390...156,659,532
JBrowse link
G BGN biglycan involved_in TAS Reactome Reactome:R-HSA-2022923 NCBI chr  X:153,494,980...153,509,546
Ensembl chr  X:153,494,980...153,509,546
JBrowse link
G CHST12 carbohydrate sulfotransferase 12 involved_in IDA (PMID:10781601) UniProt PMID:10781601 NCBI chr 7:2,403,489...2,448,484
Ensembl chr 7:2,403,588...2,448,484
JBrowse link
G CHST14 carbohydrate sulfotransferase 14 involved_in IDA
TAS
(PMID:11470797) MGI
Reactome
PMID:11470797 Reactome:R-HSA-2022923 NCBI chr15:40,470,984...40,473,158
Ensembl chr15:40,470,998...40,474,571
Ensembl chr15:40,470,998...40,474,571
JBrowse link
G CSPG4 chondroitin sulfate proteoglycan 4 involved_in TAS Reactome Reactome:R-HSA-2022923 NCBI chr15:75,674,322...75,712,848
Ensembl chr15:75,674,322...75,712,848
JBrowse link
G CSPG5 chondroitin sulfate proteoglycan 5 involved_in TAS Reactome Reactome:R-HSA-2022923 NCBI chr 3:47,562,238...47,580,240
Ensembl chr 3:47,562,238...47,580,792
JBrowse link
G DCN decorin involved_in TAS Reactome Reactome:R-HSA-2022923 NCBI chr12:91,140,484...91,182,817
Ensembl chr12:91,140,484...91,183,217
Ensembl chr12:91,140,484...91,183,217
JBrowse link
G DSE dermatan sulfate epimerase involved_in TAS
IDA
(PMID:16505484) Reactome
UniProt
PMID:16505484 Reactome:R-HSA-2022923 NCBI chr 6:116,254,171...116,444,861
Ensembl chr 6:116,254,173...116,444,861
Ensembl chr 6:116,254,173...116,444,861
JBrowse link
G DSEL dermatan sulfate epimerase like involved_in TAS Reactome Reactome:R-HSA-2022923 NCBI chr18:67,506,587...67,516,720
Ensembl chr18:67,506,587...67,516,720
JBrowse link
G NCAN neurocan involved_in TAS Reactome Reactome:R-HSA-2022923 NCBI chr19:19,211,958...19,252,233
Ensembl chr19:19,211,958...19,252,233
JBrowse link
G UST uronyl 2-sulfotransferase involved_in TAS Reactome Reactome:R-HSA-2022923 NCBI chr 6:148,745,891...149,076,990
Ensembl chr 6:148,747,030...149,076,990
JBrowse link
G VCAN versican involved_in TAS Reactome Reactome:R-HSA-2022923 NCBI chr 5:83,471,744...83,582,302
Ensembl chr 5:83,471,618...83,582,303
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 18680
    metabolic process 12220
      cellular metabolic process 11248
        cellular biosynthetic process 6394
          sulfur compound biosynthetic process 198
            dermatan sulfate biosynthetic process 12
Path 2
Term Annotations click to browse term
  biological_process 18680
    metabolic process 12220
      organic substance metabolic process 11728
        macromolecule metabolic process 10153
          protein metabolic process 6080
            glycoprotein metabolic process 432
              proteoglycan metabolic process 94
                dermatan sulfate proteoglycan metabolic process 17
                  dermatan sulfate metabolic process 14
                    dermatan sulfate biosynthetic process 12
paths to the root