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ONTOLOGY REPORT - ANNOTATIONS

Term:chondroitin sulfate biosynthetic process
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Accession:GO:0030206 term browser browse the term
Definition:The chemical reactions and pathways resulting in the formation of chondroitin sulfate, any member of a group of 10-60 kDa glycosaminoglycans, widely distributed in cartilage and other mammalian connective tissues, the repeat units of which consist of beta-(1,4)-linked D-glucuronyl beta-(1,3)-N-acetyl-D-galactosamine sulfate.
Synonyms:exact_synonym: chondroitin sulfate anabolism;   chondroitin sulfate biosynthesis;   chondroitin sulfate formation;   chondroitin sulfate synthesis;   chondroitin sulphate biosynthesis;   chondroitin sulphate biosynthetic process

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chondroitin sulfate biosynthetic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07032202.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr18:54,206,651...54,207,523 JBrowse link
G Chpf chondroitin polymerizing factor ISO
IBA		 (PMID:12761225)
PMID:21873635
MGI:2681120|MGI:5464019 (MGI:5462280|PMID:22952873), (MGI:5462286|PMID:22952769)		 RGD PMID:12761225 PMID:22952769 PMID:22952873, PMID:21873635 MGI:5462280 MGI:5462286, RGD:13792537 NCBI chr 9:82,669,199...82,673,898
Ensembl chr 9:82,669,204...82,673,898 		JBrowse link
G Chpf2 chondroitin polymerizing factor 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:7,108,461...7,113,940
Ensembl chr 4:7,108,462...7,113,919 		JBrowse link
G Chst11 carbohydrate sulfotransferase 11 ISO (PMID:11056388)
MGI:1926002 (MGI:1354846|PMID:10722746), (MGI:4941099|PMID:21138417)		 RGD PMID:10722746 PMID:11056388 PMID:21138417 MGI:1354846 MGI:4941099 NCBI chr 7:26,641,856...26,890,503
Ensembl chr 7:26,645,422...26,859,716 		JBrowse link
G Chst12 carbohydrate sulfotransferase 12 ISO (PMID:10781601) RGD PMID:10781601 NCBI chr12:16,199,975...16,218,404
Ensembl chr12:16,200,019...16,201,632 		JBrowse link
G Chst13 carbohydrate sulfotransferase 13 ISO (PMID:12080076) RGD PMID:12080076 NCBI chr 4:122,223,846...122,244,848
Ensembl chr 4:122,224,535...122,237,754 		JBrowse link
G Chst3 carbohydrate sulfotransferase 3 IEA
IBA
ISO		 GO_REF:0000107
PMID:21873635
MGI:2176247 (MGI:1206144|PMID:9597547), (MGI:2156294|PMID:11696535)
(PMID:9883891)		 Ensembl
RGD		 PMID:9597547 PMID:9883891 PMID:11696535, PMID:21873635 GO_REF:0000107 MGI:1206144 MGI:2156294, RGD:13792537 NCBI chr20:29,731,828...29,768,656
Ensembl chr20:29,731,816...29,738,506 		JBrowse link
G Chst7 carbohydrate sulfotransferase 7 ISO
IBA		 (PMID:10781596)
PMID:21873635		 RGD PMID:10781596, PMID:21873635 RGD:13792537 NCBI chr  X:2,623,018...2,657,155
Ensembl chr  X:2,623,024...2,657,155 		JBrowse link
G Chsy1 chondroitin sulfate synthase 1 ISO
IBA		 (PMID:11514575)
PMID:21873635
MGI:106576 (MGI:5462286|PMID:22952769)		 RGD PMID:11514575 PMID:22952769, PMID:21873635 MGI:5462286, RGD:13792537 NCBI chr 1:127,010,587...127,071,570
Ensembl chr 1:127,010,588...127,071,570 		JBrowse link
G Chsy3 chondroitin sulfate synthase 3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr18:54,243,626...54,497,475
Ensembl chr18:54,243,949...54,496,585 		JBrowse link
G Csgalnact1 chondroitin sulfate N-acetylgalactosaminyltransferase 1 ISO
IBA		 (PMID:11514575), (PMID:12163485)
PMID:21873635		 RGD PMID:11514575 PMID:12163485, PMID:21873635 RGD:13792537 NCBI chr16:22,704,318...23,075,071
Ensembl chr16:22,979,444...23,074,798 		JBrowse link
G Csgalnact2 chondroitin sulfate N-acetylgalactosaminyltransferase 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:150,148,626...150,185,062
Ensembl chr 4:150,153,844...150,185,044 		JBrowse link
G Slc35d1 solute carrier family 35 member D1 ISO MGI:3774133 (MGI:3771453|PMID:17952091) RGD PMID:17952091 MGI:3771453 NCBI chr 5:122,700,396...122,746,815
Ensembl chr 5:122,699,587...122,746,839 		JBrowse link
G Ugdh UDP-glucose 6-dehydrogenase ISS
ISO
IEA		 GO_REF:0000024
(MGI:2675908|PMID:14505572)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:14505572 GO_REF:0000024 GO_REF:0000107 MGI:2675908 NCBI chr14:44,479,614...44,502,845
Ensembl chr14:44,479,614...44,502,845 		JBrowse link
G Xylt1 xylosyltransferase 1 IEA
ISO		 GO_REF:0000041
(MGI:5544658|PMID:24161523)		 UniProt
RGD		 PMID:24161523 GO_REF:0000041 MGI:5544658 NCBI chr 1:186,939,698...187,264,758
Ensembl chr 1:187,149,453...187,261,632 		JBrowse link
G Xylt2 xylosyltransferase 2 IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr10:82,386,003...82,399,485
Ensembl chr10:82,386,005...82,399,485 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20044
    metabolic process 12101
      cellular metabolic process 11040
        cellular biosynthetic process 6083
          sulfur compound biosynthetic process 111
            chondroitin sulfate biosynthetic process 16
Path 2
Term Annotations click to browse term
  biological_process 20044
    metabolic process 12101
      organic substance metabolic process 11622
        macromolecule metabolic process 10033
          protein metabolic process 6073
            glycoprotein metabolic process 364
              proteoglycan metabolic process 79
                chondroitin sulfate proteoglycan metabolic process 36
                  chondroitin sulfate metabolic process 30
                    chondroitin sulfate biosynthetic process 16
paths to the root