ONTOLOGY REPORT - ANNOTATIONS
Term: chondroitin sulfate biosynthetic process
Accession: GO:0030206
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Definition: The chemical reactions and pathways resulting in the formation of chondroitin sulfate, any member of a group of 10-60 kDa glycosaminoglycans, widely distributed in cartilage and other mammalian connective tissues, the repeat units of which consist of beta-(1,4)-linked D-glucuronyl beta-(1,3)-N-acetyl-D-galactosamine sulfate.
Synonyms: exact_synonym: chondroitin sulfate anabolism; chondroitin sulfate biosynthesis; chondroitin sulfate formation; chondroitin sulfate synthesis; chondroitin sulphate biosynthesis; chondroitin sulphate biosynthetic process
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AABR07047835.1
involved_in
IEA
GO_REF:0000117
UniProt
GO_REF:0000117
Ensembl chr 5:48,925,362...48,927,475
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B4galnt3
beta-1,4-N-acetyl-galactosaminyl transferase 3
involved_in
IEA
GO_REF:0000117
UniProt
GO_REF:0000117
NCBI chr 4:153,410,907...153,509,019
Ensembl chr 4:153,409,004...153,509,321
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B4galnt4
beta-1,4-N-acetyl-galactosaminyl transferase 4
involved_in
IEA
GO_REF:0000117
UniProt
GO_REF:0000117
NCBI chr 1:196,171,394...196,182,294
Ensembl chr 1:196,171,394...196,182,294
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Chpf
chondroitin polymerizing factor
involved_in acts_upstream_of_or_within
IBA ISO
PMID:21873635 MGI:1926173|MGI:2681120 (MGI:5462286|PMID:22952769), (MGI:7266375|PMID:17253960) MGI:2681120|MGI:5464019 (MGI:5462280|PMID:22952873), (MGI:5462286|PMID:22952769) (PMID:12761225)
RGD
PMID:12761225 PMID:17253960 PMID:22952769 PMID:22952873 PMID:21873635
MGI:5462280 MGI:5462286 MGI:7266375 , RGD:13792537
NCBI chr 9:76,963,178...76,967,878
Ensembl chr 9:76,963,184...76,967,878
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Chpf2
chondroitin polymerizing factor 2
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr 4:10,578,470...10,585,940
Ensembl chr 4:10,580,462...10,585,916
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Chst11
carbohydrate sulfotransferase 11
involved_in acts_upstream_of_or_within
ISO
(PMID:11056388) MGI:1926002 (MGI:1354846|PMID:10722746), (MGI:4941099|PMID:21138417)
RGD
PMID:10722746 PMID:11056388 PMID:21138417
MGI:1354846 MGI:4941099
NCBI chr 7:20,524,535...20,743,008
Ensembl chr 7:20,528,100...20,743,111
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Chst12
carbohydrate sulfotransferase 12
involved_in
ISO
(PMID:10781601)
RGD
PMID:10781601
NCBI chr12:14,110,631...14,129,099
Ensembl chr12:14,110,393...14,129,057
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Chst13
carbohydrate sulfotransferase 13
involved_in
ISO
(PMID:12080076)
RGD
PMID:12080076
NCBI chr 4:122,824,712...122,837,935
Ensembl chr 4:122,824,022...122,838,019
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Chst3
carbohydrate sulfotransferase 3
involved_in acts_upstream_of_or_within
IDA IEA IBA ISO ISS
GO_REF:0000107 PMID:21873635 (MGI:1206144|PMID:9597547) GO_REF:0000024 (PMID:15215498), (PMID:9883891) MGI:2176247 (MGI:1206144|PMID:9597547), (MGI:2156294|PMID:11696535)
Ensembl RGD UniProt
PMID:9597547 PMID:9883891 PMID:11696535 PMID:15215498 PMID:16495484 PMID:21873635 More...
GO_REF:0000024 GO_REF:0000107 MGI:1206144 MGI:2156294 , RGD:1600854 , RGD:13792537
NCBI chr20:28,114,387...28,152,046
Ensembl chr20:28,114,404...28,121,807
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Chst7
carbohydrate sulfotransferase 7
involved_in
IBA ISO
PMID:21873635 (PMID:10781596)
RGD
PMID:10781596 PMID:21873635
RGD:13792537
NCBI chr X:2,396,260...2,432,828
Ensembl chr X:2,393,874...2,432,840
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Chsy1
chondroitin sulfate synthase 1
acts_upstream_of_or_within involved_in
ISO IBA
MGI:106576 (MGI:5462286|PMID:22952769) PMID:21873635 (PMID:11514575)
RGD
PMID:11514575 PMID:22952769 PMID:21873635
MGI:5462286 , RGD:13792537
NCBI chr 1:119,689,626...119,750,711
Ensembl chr 1:119,686,350...119,750,601
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Chsy3
chondroitin sulfate synthase 3
involved_in
ISO IBA
MGI:106576 (MGI:7266375|PMID:17253960) PMID:21873635
RGD
PMID:17253960 PMID:21873635
MGI:7266375 , RGD:13792537
NCBI chr18:52,644,356...52,901,257
Ensembl chr18:52,644,461...52,898,098
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Csgalnact1
chondroitin sulfate N-acetylgalactosaminyltransferase 1
involved_in
ISO IBA
(PMID:11514575), (PMID:12163485) PMID:21873635 MGI:1926002|MGI:4868209 (MGI:3708435|PMID:17145758), (MGI:5620532|PMID:25568321), (MGI:6112811|PMID:29287114)
RGD
PMID:11514575 PMID:12163485 PMID:17145758 PMID:25568321 PMID:29287114 PMID:21873635 More...
MGI:3708435 MGI:5620532 MGI:6112811 , RGD:13792537
NCBI chr16:20,995,210...21,330,586
Ensembl chr16:21,235,784...21,330,319
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Csgalnact2
chondroitin sulfate N-acetylgalactosaminyltransferase 2
involved_in
ISO IBA
(MGI:5620532|PMID:25568321) PMID:21873635
RGD
PMID:25568321 PMID:21873635
MGI:5620532 , RGD:13792537
NCBI chr 4:151,271,774...151,308,856
Ensembl chr 4:151,277,645...151,308,839
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Slc35d1
solute carrier family 35 member D1
acts_upstream_of_or_within
ISO
MGI:3774133 (MGI:3771453|PMID:17952091)
RGD
PMID:17952091
MGI:3771453
NCBI chr 5:117,928,628...117,981,289
Ensembl chr 5:117,934,352...117,981,311
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Ugdh
UDP-glucose 6-dehydrogenase
involved_in
IEA ISO ISS
GO_REF:0000107 (MGI:2675908|PMID:14505572) GO_REF:0000024
Ensembl RGD UniProt
PMID:14505572
GO_REF:0000024 GO_REF:0000107 MGI:2675908
NCBI chr14:42,848,704...42,872,351
Ensembl chr14:42,848,854...42,872,354
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Xylt1
xylosyltransferase 1
involved_in
IEA ISO
GO_REF:0000041 (MGI:5544658|PMID:24161523)
UniProt RGD
PMID:24161523
GO_REF:0000041 MGI:5544658
NCBI chr 1:171,643,925...171,929,774
Ensembl chr 1:171,643,925...171,926,783
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Xylt2
xylosyltransferase 2
involved_in
IEA
GO_REF:0000041
UniProt
GO_REF:0000041
NCBI chr10:79,605,910...79,619,482
Ensembl chr10:79,606,007...79,619,391
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