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ONTOLOGY REPORT - ANNOTATIONS


Term:dermatan sulfate metabolic process
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Accession:GO:0030205 term browser browse the term
Definition:The chemical reactions and pathways involving dermatan sulfate, any of a group of glycosaminoglycans with repeats consisting of beta-(1,4)-linked L-iduronyl-beta-(1,3)-N-acetyl-D-galactosamine 4-sulfate units. They are important components of ground substance or intercellular cement of skin and some connective tissues.
Synonyms:exact_synonym: chondroitin sulfate B metabolic process;   chondroitin sulfate B metabolism;   dermatan sulfate metabolism;   dermatan sulphate metabolic process;   dermatan sulphate metabolism


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dermatan sulfate metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dse dermatan sulfate epimerase involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr10:34,151,389...34,208,282
Ensembl chr10:34,151,393...34,207,715
JBrowse link
G Dsel dermatan sulfate epimerase-like involved_in
acts_upstream_of_or_within
IBA
IMP
(MGI:6201960|PMID:21873635)
(MGI:5583874|PMID:22496542)
GO_Central
MGI
PMID:21873635 PMID:22496542 MGI:5583874 MGI:6201960 NCBI chr 1:111,858,701...111,865,052
Ensembl chr 1:111,858,702...111,864,918
JBrowse link
dermatan sulfate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chst12 carbohydrate sulfotransferase 12 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 5:140,505,569...140,525,238
Ensembl chr 5:140,505,550...140,525,724
JBrowse link
G Chst14 carbohydrate sulfotransferase 14 involved_in
acts_upstream_of_or_within
ISO (PMID:11470797) MGI
MGI
PMID:11470797 GO_REF:0000008 MGI:2154458 NCBI chr 2:118,926,497...118,928,585
Ensembl chr 2:118,926,496...118,928,585
JBrowse link
G Dse dermatan sulfate epimerase involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr10:34,151,389...34,208,282
Ensembl chr10:34,151,393...34,207,715
JBrowse link
dermatan sulfate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Idua iduronidase, alpha-L acts_upstream_of_or_within
involved_in
IMP
ISO
IDA
(MGI:4397742|PMID:19834056)
(MGI:4414887|PMID:19751987)
MGI PMID:19751987 PMID:19834056 GO_REF:0000096 MGI:4397742 MGI:4414887 MGI:4834177 NCBI chr 5:108,660,331...108,685,446
Ensembl chr 5:108,660,331...108,684,557
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 23315
    cellular process 17441
      cellular metabolic process 9991
        sulfur compound metabolic process 310
          dermatan sulfate metabolic process 5
            dermatan sulfate biosynthetic process 3
            dermatan sulfate catabolic process 1
Path 2
Term Annotations click to browse term
  biological_process 23315
    metabolic process 11115
      organic substance metabolic process 10680
        macromolecule metabolic process 9183
          cellular macromolecule metabolic process 7603
            glycoprotein metabolic process 346
              proteoglycan metabolic process 76
                dermatan sulfate proteoglycan metabolic process 7
                  dermatan sulfate metabolic process 5
                    dermatan sulfate biosynthetic process 3
                    dermatan sulfate catabolic process 1
paths to the root