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ONTOLOGY REPORT - ANNOTATIONS


Term:dermatan sulfate metabolic process
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Accession:GO:0030205 term browser browse the term
Definition:The chemical reactions and pathways involving dermatan sulfate, any of a group of glycosaminoglycans with repeats consisting of beta-(1,4)-linked L-iduronyl-beta-(1,3)-N-acetyl-D-galactosamine 4-sulfate units. They are important components of ground substance or intercellular cement of skin and some connective tissues.
Synonyms:exact_synonym: chondroitin sulfate B metabolic process;   chondroitin sulfate B metabolism;   dermatan sulfate metabolism;   dermatan sulphate metabolic process;   dermatan sulphate metabolism


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dermatan sulfate metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DSE dermatan sulfate epimerase involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:116,254,171...116,444,861
Ensembl chr 6:116,254,173...116,444,861
Ensembl chr 6:116,254,173...116,444,861
JBrowse link
G DSEL dermatan sulfate epimerase like involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:21873635)
(MGI:5583874|PMID:22496542)
GO_Central
MGI
PMID:21873635 PMID:22496542 MGI:5583874 NCBI chr18:67,506,587...67,516,720
Ensembl chr18:67,506,587...67,516,720
JBrowse link
G Z84488.1 novel protein involved_in IBA (PMID:21873635) GO_Central PMID:21873635 Ensembl chr 6:116,399,395...116,463,696 JBrowse link
dermatan sulfate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BCAN brevican involved_in TAS Reactome Reactome:R-HSA-2022923 NCBI chr 1:156,642,117...156,659,528
Ensembl chr 1:156,641,390...156,659,532
JBrowse link
G BGN biglycan involved_in TAS Reactome Reactome:R-HSA-2022923 NCBI chr  X:153,494,980...153,509,546
Ensembl chr  X:153,494,980...153,509,546
JBrowse link
G CHST12 carbohydrate sulfotransferase 12 involved_in IDA (PMID:10781601) UniProt PMID:10781601 NCBI chr 7:2,403,489...2,448,484
Ensembl chr 7:2,403,588...2,448,484
JBrowse link
G CHST14 carbohydrate sulfotransferase 14 involved_in TAS Reactome Reactome:R-HSA-2022923 NCBI chr15:40,470,984...40,473,158
Ensembl chr15:40,470,998...40,474,571
Ensembl chr15:40,470,998...40,474,571
JBrowse link
G CSPG4 chondroitin sulfate proteoglycan 4 involved_in TAS Reactome Reactome:R-HSA-2022923 NCBI chr15:75,674,322...75,712,848
Ensembl chr15:75,674,322...75,712,848
JBrowse link
G CSPG5 chondroitin sulfate proteoglycan 5 involved_in TAS Reactome Reactome:R-HSA-2022923 NCBI chr 3:47,562,238...47,580,240
Ensembl chr 3:47,562,238...47,580,792
JBrowse link
G DCN decorin involved_in TAS Reactome Reactome:R-HSA-2022923 NCBI chr12:91,140,484...91,182,817
Ensembl chr12:91,140,484...91,183,217
Ensembl chr12:91,140,484...91,183,217
JBrowse link
G DSE dermatan sulfate epimerase involved_in TAS
IDA
(PMID:16505484) Reactome
UniProt
PMID:16505484 Reactome:R-HSA-2022923 NCBI chr 6:116,254,171...116,444,861
Ensembl chr 6:116,254,173...116,444,861
Ensembl chr 6:116,254,173...116,444,861
JBrowse link
G DSEL dermatan sulfate epimerase like involved_in TAS Reactome Reactome:R-HSA-2022923 NCBI chr18:67,506,587...67,516,720
Ensembl chr18:67,506,587...67,516,720
JBrowse link
G NCAN neurocan involved_in TAS Reactome Reactome:R-HSA-2022923 NCBI chr19:19,211,958...19,252,233
Ensembl chr19:19,211,958...19,252,233
JBrowse link
G UST uronyl 2-sulfotransferase involved_in TAS Reactome Reactome:R-HSA-2022923 NCBI chr 6:148,745,891...149,076,990
Ensembl chr 6:148,747,030...149,076,990
JBrowse link
G VCAN versican involved_in TAS Reactome Reactome:R-HSA-2022923 NCBI chr 5:83,471,744...83,582,302
Ensembl chr 5:83,471,618...83,582,303
JBrowse link
dermatan sulfate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G IDUA alpha-L-iduronidase involved_in
acts_upstream_of_or_within
IDA
ISO
(PMID:24036510)
(MGI:4397742|PMID:19834056)
(MGI:4414887|PMID:19751987)
UniProt
MGI
PMID:19751987 PMID:19834056 PMID:24036510 MGI:4397742 MGI:4414887 NCBI chr 4:986,997...1,004,564
Ensembl chr 4:986,997...1,004,564
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 18670
    cellular process 17720
      cellular metabolic process 11203
        sulfur compound metabolic process 411
          dermatan sulfate metabolic process 14
            dermatan sulfate biosynthetic process 12
            dermatan sulfate catabolic process 1
Path 2
Term Annotations click to browse term
  biological_process 18670
    metabolic process 12177
      organic substance metabolic process 11697
        macromolecule metabolic process 10120
          cellular macromolecule metabolic process 8644
            glycoprotein metabolic process 432
              proteoglycan metabolic process 94
                dermatan sulfate proteoglycan metabolic process 17
                  dermatan sulfate metabolic process 14
                    dermatan sulfate biosynthetic process 12
                    dermatan sulfate catabolic process 1
paths to the root