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ONTOLOGY REPORT - ANNOTATIONS


Term:dermatan sulfate metabolic process
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Accession:GO:0030205 term browser browse the term
Definition:The chemical reactions and pathways involving dermatan sulfate, any of a group of glycosaminoglycans with repeats consisting of beta-(1,4)-linked L-iduronyl-beta-(1,3)-N-acetyl-D-galactosamine 4-sulfate units. They are important components of ground substance or intercellular cement of skin and some connective tissues.
Synonyms:exact_synonym: chondroitin sulfate B metabolic process;   chondroitin sulfate B metabolism;   dermatan sulfate metabolism;   dermatan sulphate metabolic process;   dermatan sulphate metabolism


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dermatan sulfate metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dsel dermatan sulfate epimerase like acts_upstream_of_or_within ISO (MGI:5583874|PMID:22496542) MGI PMID:22496542 MGI:5583874 NCBI chrNW_004955402:51,017,963...51,023,508
Ensembl chrNW_004955402:51,017,963...51,023,508
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dermatan sulfate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chst12 carbohydrate sulfotransferase 12 involved_in ISO (PMID:10781601) UniProt PMID:10781601 NCBI chrNW_004955460:12,847,440...12,875,614
Ensembl chrNW_004955460:12,847,440...12,875,614
JBrowse link
G Chst14 carbohydrate sulfotransferase 14 involved_in ISO (PMID:11470797) MGI PMID:11470797 NCBI chrNW_004955416:7,391,281...7,393,137
Ensembl chrNW_004955416:7,391,282...7,392,355
JBrowse link
G Dse dermatan sulfate epimerase involved_in ISO (PMID:16505484) UniProt PMID:16505484 NCBI chrNW_004955526:348,673...393,328 JBrowse link
dermatan sulfate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Idua alpha-L-iduronidase involved_in
acts_upstream_of_or_within
ISO (PMID:24036510)
(MGI:4414887|PMID:19751987)
(MGI:4397742|PMID:19834056)
UniProt
MGI
PMID:19751987 PMID:19834056 PMID:24036510 MGI:4397742 MGI:4414887 NCBI chrNW_004955514:474,830...488,007
Ensembl chrNW_004955514:475,731...488,007
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 11952
    cellular process 11169
      cellular metabolic process 6965
        sulfur compound metabolic process 208
          dermatan sulfate metabolic process 5
            dermatan sulfate biosynthetic process 3
            dermatan sulfate catabolic process 1
Path 2
Term Annotations click to browse term
  biological_process 11952
    metabolic process 7564
      organic substance metabolic process 7266
        macromolecule metabolic process 6267
          cellular macromolecule metabolic process 5374
            glycoprotein metabolic process 257
              proteoglycan metabolic process 64
                dermatan sulfate proteoglycan metabolic process 7
                  dermatan sulfate metabolic process 5
                    dermatan sulfate biosynthetic process 3
                    dermatan sulfate catabolic process 1
paths to the root