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ONTOLOGY REPORT - ANNOTATIONS


Term:dermatan sulfate metabolic process
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Accession:GO:0030205 term browser browse the term
Definition:The chemical reactions and pathways involving dermatan sulfate, any of a group of glycosaminoglycans with repeats consisting of beta-(1,4)-linked L-iduronyl-beta-(1,3)-N-acetyl-D-galactosamine 4-sulfate units. They are important components of ground substance or intercellular cement of skin and some connective tissues.
Synonyms:exact_synonym: chondroitin sulfate B metabolic process;   chondroitin sulfate B metabolism;   dermatan sulfate metabolism;   dermatan sulphate metabolic process;   dermatan sulphate metabolism


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dermatan sulfate metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DSEL dermatan sulfate epimerase like acts_upstream_of_or_within ISO (MGI:5583874|PMID:22496542) MGI PMID:22496542 MGI:5583874 NCBI chr18:60,880,241...60,890,372 JBrowse link
dermatan sulfate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CHST12 carbohydrate sulfotransferase 12 involved_in ISO (PMID:10781601) UniProt PMID:10781601 NCBI chr 7:2,666,062...2,697,292
Ensembl chr 7:2,792,210...2,793,454
JBrowse link
G DSE dermatan sulfate epimerase involved_in ISO (PMID:16505484) UniProt PMID:16505484 NCBI chr 6:114,173,641...114,246,129 JBrowse link
dermatan sulfate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G IDUA alpha-L-iduronidase involved_in
acts_upstream_of_or_within
ISO (PMID:24036510)
(MGI:4414887|PMID:19751987)
(MGI:4397742|PMID:19834056)
UniProt
MGI
PMID:19751987 PMID:19834056 PMID:24036510 MGI:4397742 MGI:4414887 NCBI chr 4:1,102,288...1,120,973
Ensembl chr 4:1,020,582...1,037,877
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 12543
    cellular process 11661
      cellular metabolic process 7172
        sulfur compound metabolic process 225
          dermatan sulfate metabolic process 4
            dermatan sulfate biosynthetic process 2
            dermatan sulfate catabolic process 1
Path 2
Term Annotations click to browse term
  biological_process 12543
    metabolic process 7835
      organic substance metabolic process 7550
        macromolecule metabolic process 6475
          cellular macromolecule metabolic process 5503
            glycoprotein metabolic process 257
              proteoglycan metabolic process 64
                dermatan sulfate proteoglycan metabolic process 7
                  dermatan sulfate metabolic process 4
                    dermatan sulfate biosynthetic process 2
                    dermatan sulfate catabolic process 1
paths to the root