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ONTOLOGY REPORT - ANNOTATIONS


Term:glycosaminoglycan metabolic process
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Accession:GO:0030203 term browser browse the term
Definition:The chemical reactions and pathways involving glycosaminoglycans, any of a group of polysaccharides that contain amino sugars.
Synonyms:exact_synonym: glycosaminoglycan metabolism



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glycosaminoglycan metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CLN6 CLN6 transmembrane ER protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:47,156,583...47,215,805
Ensembl chr15:65,425,472...65,985,242
JBrowse link
G FOXC1 forkhead box C1 acts_upstream_of_or_within ISO (PMID:4269479) MGI PMID:4269479 NCBI chr 6:1,429,051...1,433,180 JBrowse link
G GNS glucosamine (N-acetyl)-6-sulfatase involved_in IEA UniProt
InterPro
GO_REF:0000002 GO_REF:0000104 NCBI chr12:24,164,127...24,209,963
Ensembl chr12:24,667,603...24,712,939
JBrowse link
G HEXA hexosaminidase subunit alpha involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:8896570) Ensembl
MGI
TreeGrafter
PMID:8896570 GO_REF:0000107 GO_REF:0000118 NCBI chr15:51,235,123...51,326,832
Ensembl chr15:70,057,943...70,090,688
Ensembl chr15:70,057,943...70,090,688
JBrowse link
G HEXB hexosaminidase subunit beta involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:8896570) Ensembl
MGI
TreeGrafter
PMID:8896570 GO_REF:0000107 GO_REF:0000118 NCBI chr 5:40,589,448...40,625,176
Ensembl chr 5:41,199,681...41,232,693
JBrowse link
G NAGLU N-acetyl-alpha-glucosaminidase involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:19632871), (PMID:25524704), (PMID:29180785) Ensembl
MGI
PMID:19632871 PMID:25524704 PMID:29180785 GO_REF:0000107 NCBI chr17:14,772,054...14,780,398
Ensembl chr17:14,996,420...15,004,242
JBrowse link
G NDST1 N-deacetylase and N-sulfotransferase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16020517) Ensembl
MGI
PMID:16020517 GO_REF:0000107 NCBI chr 5:145,910,993...145,982,933
Ensembl chr 5:151,936,357...151,986,668
JBrowse link
chondroitin sulfate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CHPF chondroitin polymerizing factor involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:22952769)
(PMID:22952873)
Ensembl
MGI
TreeGrafter
PMID:22952769 PMID:22952873 GO_REF:0000107 GO_REF:0000118 NCBI chr2B:106,796,215...106,801,081
Ensembl chr2B:225,386,262...225,390,886
JBrowse link
G CHPF2 chondroitin polymerizing factor 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 7:142,818,243...142,825,718
Ensembl chr 7:154,971,194...154,977,557
JBrowse link
G CHST11 carbohydrate sulfotransferase 11 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:10722746)
(PMID:21138417)
Ensembl
MGI
PMID:10722746 PMID:21138417 GO_REF:0000107 NCBI chr12:102,035,480...102,340,084
Ensembl chr12:105,431,075...105,731,172
JBrowse link
G CHST12 carbohydrate sulfotransferase 12 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:2,666,062...2,697,292
Ensembl chr 7:2,792,210...2,793,454
JBrowse link
G CHST13 carbohydrate sulfotransferase 13 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:123,569,493...123,592,816
Ensembl chr 3:130,889,157...130,907,762
JBrowse link
G CHST3 carbohydrate sulfotransferase 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:11696535)
(PMID:9597547)
RGD
MGI
TreeGrafter
Ensembl
PMID:9597547 PMID:11696535 PMID:16495484 GO_REF:0000107 GO_REF:0000118 RGD:1600854 NCBI chr10:68,427,305...68,476,512
Ensembl chr10:70,951,190...70,994,936
JBrowse link
G CHST7 carbohydrate sulfotransferase 7 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr  X:39,012,011...39,036,655
Ensembl chr  X:46,873,942...46,875,436
JBrowse link
G CHSY1 chondroitin sulfate synthase 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:11514575)
(PMID:22952769)
MGI
TreeGrafter
Ensembl
PMID:11514575 PMID:22952769 GO_REF:0000107 GO_REF:0000118 NCBI chr15:79,901,340...79,976,067
Ensembl chr15:99,186,705...99,260,591
JBrowse link
G CHSY3 chondroitin sulfate synthase 3 involved_in ISO (PMID:17253960) MGI PMID:17253960 NCBI chr 5:125,319,738...125,601,102 JBrowse link
G CSGALNACT1 chondroitin sulfate N-acetylgalactosaminyltransferase 1 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr 8:18,626,998...18,980,416
Ensembl chr 8:15,576,416...15,904,123
JBrowse link
G CSGALNACT2 chondroitin sulfate N-acetylgalactosaminyltransferase 2 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr10:40,111,714...40,159,683
Ensembl chr10:43,311,054...43,342,855
JBrowse link
G SLC35B2 solute carrier family 35 member B2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:43,849,849...43,853,328
Ensembl chr 6:45,133,186...45,136,629
JBrowse link
G SLC35D1 solute carrier family 35 member D1 acts_upstream_of_or_within ISO (PMID:17952091) MGI PMID:17952091 NCBI chr 1:66,248,462...66,303,630
Ensembl chr 1:68,134,617...68,188,694
JBrowse link
G UGDH UDP-glucose 6-dehydrogenase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:33,827,532...33,856,204
Ensembl chr 4:39,681,300...39,708,215
JBrowse link
G XYLT1 xylosyltransferase 1 involved_in IEA UniProt GO_REF:0000041 NCBI chr16:20,078,904...20,447,268
Ensembl chr16:17,222,447...17,470,818
JBrowse link
G XYLT2 xylosyltransferase 2 involved_in IEA UniProt GO_REF:0000041 NCBI chr17:44,440,428...44,455,530
Ensembl chr17:49,315,250...49,331,654
JBrowse link
chondroitin sulfate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GUSB glucuronidase beta involved_in ISO (PMID:23897660) MGI PMID:23897660 NCBI chr 7:60,087,130...60,109,289
Ensembl chr 7:64,724,841...64,744,909
JBrowse link
G HEXB hexosaminidase subunit beta involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:40,589,448...40,625,176
Ensembl chr 5:41,199,681...41,232,693
JBrowse link
G HYAL1 hyaluronidase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:50,228,491...50,238,798
Ensembl chr 3:51,463,239...51,467,286
JBrowse link
G LOC100979818 hyaluronidase-4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:115,836,641...115,868,915
Ensembl chr 7:128,521,818...128,551,186
JBrowse link
chondroitin sulfate metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BPNT2 3'(2'), 5'-bisphosphate nucleotidase 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:18695242)
(PMID:18539921)
Ensembl
MGI
PMID:18539921 PMID:18695242 GO_REF:0000107 NCBI chr 8:53,385,837...53,417,019
Ensembl chr 8:50,753,792...50,785,055
JBrowse link
G CHST11 carbohydrate sulfotransferase 11 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16079159) Ensembl
MGI
PMID:16079159 GO_REF:0000107 NCBI chr12:102,035,480...102,340,084
Ensembl chr12:105,431,075...105,731,172
JBrowse link
G CSGALNACT1 chondroitin sulfate N-acetylgalactosaminyltransferase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:21148564)
(PMID:20812917)
Ensembl
MGI
PMID:20812917 PMID:21148564 GO_REF:0000107 NCBI chr 8:18,626,998...18,980,416
Ensembl chr 8:15,576,416...15,904,123
JBrowse link
G DSE dermatan sulfate epimerase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:114,173,641...114,246,129
Ensembl chr 6:118,347,786...118,386,193
JBrowse link
G DSEL dermatan sulfate epimerase like acts_upstream_of_or_within ISO (PMID:22496542) MGI PMID:22496542 NCBI chr18:60,880,241...60,890,372 JBrowse link
G EXT1 exostosin glycosyltransferase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:32201365) Ensembl
MGI
PMID:32201365 GO_REF:0000107 NCBI chr 8:114,489,325...114,803,763
Ensembl chr 8:117,011,919...117,324,851
JBrowse link
dermatan sulfate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CHST12 carbohydrate sulfotransferase 12 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:2,666,062...2,697,292
Ensembl chr 7:2,792,210...2,793,454
JBrowse link
G CHST14 carbohydrate sulfotransferase 14 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:11470797) MGI
Ensembl
PMID:11470797 GO_REF:0000107 NCBI chr15:19,407,477...19,409,645
Ensembl chr15:37,660,621...37,661,622
JBrowse link
G DSE dermatan sulfate epimerase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:114,173,641...114,246,129
Ensembl chr 6:118,347,786...118,386,193
JBrowse link
dermatan sulfate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARSB arylsulfatase B involved_in ISO (PMID:24240681) MGI PMID:24240681 NCBI chr 5:36,325,581...36,534,371
Ensembl chr 5:36,804,874...37,023,739
JBrowse link
G HEXA hexosaminidase subunit alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:51,235,123...51,326,832
Ensembl chr15:70,057,943...70,090,688
Ensembl chr15:70,057,943...70,090,688
JBrowse link
G HEXB hexosaminidase subunit beta involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:40,589,448...40,625,176
Ensembl chr 5:41,199,681...41,232,693
JBrowse link
G IDS iduronate 2-sulfatase involved_in ISO (PMID:30064964) MGI PMID:30064964 NCBI chr  X:138,493,117...138,520,017
Ensembl chr  X:148,912,475...148,946,441
JBrowse link
G IDUA alpha-L-iduronidase involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:19751987)
(PMID:19834056)
Ensembl
MGI
PMID:19751987 PMID:19834056 GO_REF:0000107 NCBI chr 4:1,102,288...1,120,973
Ensembl chr 4:1,020,582...1,037,877
JBrowse link
dermatan sulfate metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DSE dermatan sulfate epimerase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:114,173,641...114,246,129
Ensembl chr 6:118,347,786...118,386,193
JBrowse link
G DSEL dermatan sulfate epimerase like acts_upstream_of_or_within ISO (PMID:22496542) MGI PMID:22496542 NCBI chr18:60,880,241...60,890,372 JBrowse link
glycosaminoglycan biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACCS 1-aminocyclopropane-1-carboxylate synthase homolog (inactive) involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:44,026,501...44,044,928
Ensembl chr11:44,522,797...44,699,447
JBrowse link
G B3GALT6 beta-1,3-galactosyltransferase 6 involved_in
acts_upstream_of_or_within
ISO (PMID:11551958) UniProt
MGI
PMID:11551958
G B3GAT1 beta-1,3-glucuronyltransferase 1 involved_in ISO (PMID:12032138), (PMID:26659409) MGI PMID:12032138 PMID:26659409 NCBI chr11:129,200,676...129,269,650
Ensembl chr11:133,089,603...133,117,492
JBrowse link
G B3GAT3 beta-1,3-glucuronyltransferase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:57,972,509...57,979,702
Ensembl chr11:61,327,454...61,332,323
JBrowse link
G B4GALT7 beta-1,4-galactosyltransferase 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:172,905,749...172,915,970
Ensembl chr 5:179,965,928...179,976,158
JBrowse link
G EXT1 exostosin glycosyltransferase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:114,489,325...114,803,763
Ensembl chr 8:117,011,919...117,324,851
JBrowse link
G EXT2 exostosin glycosyltransferase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:44,055,670...44,204,055
Ensembl chr11:44,522,797...44,699,447
JBrowse link
G HAS1 hyaluronan synthase 1 involved_in IEA UniProt GO_REF:0000117 NCBI chr19:48,657,165...48,668,130
Ensembl chr19:57,537,049...57,547,804
JBrowse link
G HAS2 hyaluronan synthase 2 involved_in IEA UniProt GO_REF:0000117 NCBI chr 8:118,313,186...118,342,160
Ensembl chr 8:121,072,154...121,089,365
JBrowse link
G HAS3 hyaluronan synthase 3 involved_in IEA UniProt GO_REF:0000117 NCBI chr16:49,476,561...49,488,820
Ensembl chr16:68,868,416...68,877,476
JBrowse link
G HEXA hexosaminidase subunit alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:51,235,123...51,326,832
Ensembl chr15:70,057,943...70,090,688
Ensembl chr15:70,057,943...70,090,688
JBrowse link
G HS3ST1 heparan sulfate-glucosamine 3-sulfotransferase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:5,797,803...5,829,976
Ensembl chr 4:11,108,374...11,109,297
JBrowse link
G HS3ST2 heparan sulfate-glucosamine 3-sulfotransferase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:15,195,577...15,297,155
Ensembl chr16:23,067,554...23,168,609
JBrowse link
G HS3ST3A1 heparan sulfate-glucosamine 3-sulfotransferase 3A1 involved_in ISO (PMID:15304505), (PMID:9988768) UniProt PMID:9988768 PMID:15304505 NCBI chr17:38,047,573...38,155,543 JBrowse link
G HS3ST3B1 heparan sulfate-glucosamine 3-sulfotransferase 3B1 involved_in ISO (PMID:9988768) UniProt PMID:9988768 NCBI chr17:37,302,663...37,351,099 JBrowse link
G LOC103785234 hyaluronan synthase 2-like involved_in IEA UniProt GO_REF:0000117 NCBI chr 7:121,341,839...121,344,439 JBrowse link
G PDGFRB platelet derived growth factor receptor beta ISO RGD PMID:11903042 RGD:1581762 NCBI chr 5:145,538,330...145,580,312
Ensembl chr 5:151,543,891...151,585,530
JBrowse link
G PXYLP1 2-phosphoxylose phosphatase 1 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr 3:138,264,529...138,327,615
Ensembl chr 3:145,864,356...145,925,073
JBrowse link
G UGDH UDP-glucose 6-dehydrogenase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 4:33,827,532...33,856,204
Ensembl chr 4:39,681,300...39,708,215
JBrowse link
G XYLT1 xylosyltransferase 1 involved_in ISO (PMID:24161523) MGI PMID:24161523 NCBI chr16:20,078,904...20,447,268
Ensembl chr16:17,222,447...17,470,818
JBrowse link
G XYLT2 xylosyltransferase 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17517600) Ensembl
MGI
PMID:17517600 GO_REF:0000107 NCBI chr17:44,440,428...44,455,530
Ensembl chr17:49,315,250...49,331,654
JBrowse link
glycosaminoglycan catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HYAL2 hyaluronidase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:50,243,926...50,248,972
Ensembl chr 3:51,479,020...51,482,551
JBrowse link
G IDS iduronate 2-sulfatase involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:138,493,117...138,520,017
Ensembl chr  X:148,912,475...148,946,441
JBrowse link
G IDUA alpha-L-iduronidase acts_upstream_of_or_within ISO (PMID:16979922), (PMID:22580166)
(PMID:19834056)
(PMID:21873421)
(PMID:19751987)
RGD
MGI
PMID:6138357 PMID:16979922 PMID:19751987 PMID:19834056 PMID:21873421 More... RGD:1599427 NCBI chr 4:1,102,288...1,120,973
Ensembl chr 4:1,020,582...1,037,877
JBrowse link
G LYVE1 lymphatic vessel endothelial hyaluronan receptor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:11278811) Ensembl
MGI
PMID:11278811 GO_REF:0000107 NCBI chr11:10,690,086...10,702,785
Ensembl chr11:10,417,223...10,428,170
JBrowse link
G SGSH N-sulfoglucosamine sulfohydrolase involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr17:74,636,854...74,647,958
Ensembl chr17:80,371,790...80,381,703
JBrowse link
heparin biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACCS 1-aminocyclopropane-1-carboxylate synthase homolog (inactive) involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:44,026,501...44,044,928
Ensembl chr11:44,522,797...44,699,447
JBrowse link
G ANGPT1 angiopoietin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:103,893,234...104,137,661
Ensembl chr 8:106,042,041...106,286,783
JBrowse link
G EXT1 exostosin glycosyltransferase 1 involved_in
acts_upstream_of_or_within
acts_upstream_of_or_within_positive_effect
IEA
ISO
(PMID:21148566)
(PMID:21310272)
(PMID:10926768), (PMID:15161920), (PMID:15177029), (PMID:18480751)
Ensembl
MGI
PMID:10926768 PMID:15161920 PMID:15177029 PMID:18480751 PMID:21148566 More... GO_REF:0000107 NCBI chr 8:114,489,325...114,803,763
Ensembl chr 8:117,011,919...117,324,851
JBrowse link
G EXT2 exostosin glycosyltransferase 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:21310272) Ensembl
MGI
PMID:21310272 GO_REF:0000107 NCBI chr11:44,055,670...44,204,055
Ensembl chr11:44,522,797...44,699,447
JBrowse link
G GLCE glucuronic acid epimerase involved_in IEA Ensembl
UniProt
GO_REF:0000041 GO_REF:0000107 NCBI chr15:48,110,725...48,222,251
Ensembl chr15:66,979,271...66,995,646
JBrowse link
G LOC100986527 N-deacetylase and N-sulfotransferase 4 involved_in IEA UniProt GO_REF:0000041 NCBI chr 4:107,345,741...107,636,362
Ensembl chr 4:117,911,985...118,198,128
JBrowse link
G NDST1 N-deacetylase and N-sulfotransferase 1 involved_in IEA UniProt GO_REF:0000041 NCBI chr 5:145,910,993...145,982,933
Ensembl chr 5:151,936,357...151,986,668
JBrowse link
G NDST2 N-deacetylase and N-sulfotransferase 2 involved_in IEA UniProt GO_REF:0000041 NCBI chr10:70,324,842...70,335,169
Ensembl chr10:72,997,798...73,004,114
JBrowse link
G NDST3 N-deacetylase and N-sulfotransferase 3 involved_in IEA UniProt GO_REF:0000041 NCBI chr 4:110,476,743...110,705,030
Ensembl chr 4:121,031,051...121,259,594
JBrowse link
G SLC10A7 solute carrier family 10 member 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:138,592,266...138,857,833
Ensembl chr 4:150,251,966...150,510,812
JBrowse link
G XYLT2 xylosyltransferase 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17517600) Ensembl
MGI
PMID:17517600 GO_REF:0000107 NCBI chr17:44,440,428...44,455,530
Ensembl chr17:49,315,250...49,331,654
JBrowse link
heparin catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G IDUA alpha-L-iduronidase acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:21873421)
(PMID:19834056)
(PMID:19751987)
MGI
Ensembl
PMID:19751987 PMID:19834056 PMID:21873421 GO_REF:0000107 NCBI chr 4:1,102,288...1,120,973
Ensembl chr 4:1,020,582...1,037,877
JBrowse link
heparin metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EDNRA endothelin receptor type A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:139,815,336...139,879,600
Ensembl chr 4:151,476,356...151,536,497
JBrowse link
G EDNRB endothelin receptor type B involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:59,112,349...59,136,615
Ensembl chr13:78,153,020...78,177,286
JBrowse link
G EXT1 exostosin glycosyltransferase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:26491162), (PMID:32201365) Ensembl
MGI
PMID:26491162 PMID:32201365 GO_REF:0000107 NCBI chr 8:114,489,325...114,803,763
Ensembl chr 8:117,011,919...117,324,851
JBrowse link
G HPSE heparanase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:40,863,491...40,905,693
Ensembl chr 4:46,709,621...46,755,157
JBrowse link
G HS2ST1 heparan sulfate 2-O-sulfotransferase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:11457822) Ensembl
MGI
PMID:11457822 GO_REF:0000107 NCBI chr 1:119,432,583...119,630,472
Ensembl chr 1:88,283,872...88,475,198
JBrowse link
G NAGLU N-acetyl-alpha-glucosaminidase involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:12111813), (PMID:25267636), (PMID:29624734) Ensembl
MGI
PMID:12111813 PMID:25267636 PMID:29624734 GO_REF:0000107 NCBI chr17:14,772,054...14,780,398
Ensembl chr17:14,996,420...15,004,242
JBrowse link
hyaluronan biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCC5 ATP binding cassette subfamily C member 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:180,956,139...181,054,112
Ensembl chr 3:189,122,590...189,219,492
JBrowse link
G CCND3 cyclin D3 ISO RGD PMID:19276076 RGD:2316018 NCBI chr 6:41,518,421...41,630,103
Ensembl chr 6:42,820,569...42,827,498
JBrowse link
G HAS1 hyaluronan synthase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:10617644) TreeGrafter
MGI
PMID:10617644 GO_REF:0000118 NCBI chr19:48,657,165...48,668,130
Ensembl chr19:57,537,049...57,547,804
JBrowse link
G HAS2 hyaluronan synthase 2 involved_in IEA Ensembl
TreeGrafter
UniProt
GO_REF:0000041 GO_REF:0000107 GO_REF:0000118 NCBI chr 8:118,313,186...118,342,160
Ensembl chr 8:121,072,154...121,089,365
JBrowse link
G HAS3 hyaluronan synthase 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:9060470) Ensembl
MGI
TreeGrafter
PMID:9060470 GO_REF:0000107 GO_REF:0000118 NCBI chr16:49,476,561...49,488,820
Ensembl chr16:68,868,416...68,877,476
JBrowse link
G HYAL1 hyaluronidase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:50,228,491...50,238,798
Ensembl chr 3:51,463,239...51,467,286
JBrowse link
G IL1B interleukin 1 beta involved_in IEA Ensembl GO_REF:0000107 NCBI chr2A:89,216,313...89,223,358
Ensembl chr2A:113,846,306...113,853,424
JBrowse link
G LOC103785234 hyaluronan synthase 2-like involved_in IEA Ensembl
TreeGrafter
UniProt
GO_REF:0000041 GO_REF:0000107 GO_REF:0000118 NCBI chr 7:121,341,839...121,344,439 JBrowse link
hyaluronan catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CD44 CD44 molecule (IN blood group) involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:35,110,732...35,258,238
Ensembl chr11:34,985,634...35,079,009
JBrowse link
G CEMIP cell migration inducing hyaluronidase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:59,760,481...59,932,698
Ensembl chr15:78,810,600...78,888,723
JBrowse link
G CEMIP2 cell migration inducing hyaluronidase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:53,044,517...53,129,875
Ensembl chr 9:70,428,899...70,493,952
JBrowse link
G FGF2 fibroblast growth factor 2 involved_in ISO (PMID:19577615) UniProt PMID:19577615 NCBI chr 4:115,005,136...115,076,369
Ensembl chr 4:126,149,813...126,214,942
JBrowse link
G GUSB glucuronidase beta involved_in ISO (PMID:20385825) MGI PMID:20385825 NCBI chr 7:60,087,130...60,109,289
Ensembl chr 7:64,724,841...64,744,909
JBrowse link
G HEXA hexosaminidase subunit alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:51,235,123...51,326,832
Ensembl chr15:70,057,943...70,090,688
Ensembl chr15:70,057,943...70,090,688
JBrowse link
G HEXB hexosaminidase subunit beta involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:40,589,448...40,625,176
Ensembl chr 5:41,199,681...41,232,693
JBrowse link
G HMMR hyaluronan mediated motility receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:158,837,511...158,868,800
Ensembl chr 5:165,614,127...165,645,478
JBrowse link
G HYAL1 hyaluronidase 1 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr 3:50,228,491...50,238,798
Ensembl chr 3:51,463,239...51,467,286
JBrowse link
G HYAL2 hyaluronidase 2 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr 3:50,243,926...50,248,972
Ensembl chr 3:51,479,020...51,482,551
JBrowse link
G HYAL3 hyaluronidase 3 involved_in IEA Ensembl
TreeGrafter
InterPro
GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr 3:50,221,428...50,228,062
Ensembl chr 3:51,456,173...51,462,815
JBrowse link
G LOC100979818 hyaluronidase-4 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 7:115,836,641...115,868,915
Ensembl chr 7:128,521,818...128,551,186
JBrowse link
G LYVE1 lymphatic vessel endothelial hyaluronan receptor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:10,690,086...10,702,785
Ensembl chr11:10,417,223...10,428,170
JBrowse link
G SPAM1 sperm adhesion molecule 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 7:115,916,304...115,951,103
Ensembl chr 7:128,623,193...128,643,550
JBrowse link
G STAB2 stabilin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:101,165,854...101,343,144
Ensembl chr12:104,561,264...104,738,599
JBrowse link
G TGFB1 transforming growth factor beta 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:38,324,009...38,347,003
Ensembl chr19:46,831,659...46,852,973
JBrowse link
hyaluronan metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CEMIP cell migration inducing hyaluronidase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:59,760,481...59,932,698
Ensembl chr15:78,810,600...78,888,723
JBrowse link
G HAS2 hyaluronan synthase 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:21246657) Ensembl
MGI
PMID:21246657 GO_REF:0000107 NCBI chr 8:118,313,186...118,342,160
Ensembl chr 8:121,072,154...121,089,365
JBrowse link
G HYAL1 hyaluronidase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:50,228,491...50,238,798
Ensembl chr 3:51,463,239...51,467,286
JBrowse link
G IL15 interleukin 15 ISO RGD PMID:17667861 RGD:5013835 NCBI chr 4:133,693,995...134,115,470
Ensembl chr 4:145,402,111...145,416,622
JBrowse link
G ITIH1 inter-alpha-trypsin inhibitor heavy chain 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr 3:52,719,065...52,733,507
Ensembl chr 3:53,945,141...53,959,378
JBrowse link
G ITIH2 inter-alpha-trypsin inhibitor heavy chain 2 involved_in IEA InterPro GO_REF:0000002 NCBI chr10:7,732,931...7,782,362
Ensembl chr10:7,713,454...7,762,756
JBrowse link
G ITIH3 inter-alpha-trypsin inhibitor heavy chain 3 involved_in IEA InterPro GO_REF:0000002 NCBI chr 3:52,733,966...52,750,198
Ensembl chr 3:53,961,451...53,976,065
JBrowse link
G ITIH4 inter-alpha-trypsin inhibitor heavy chain 4 involved_in IEA InterPro GO_REF:0000002 NCBI chr 3:52,754,664...52,774,867
Ensembl chr 3:53,980,668...53,998,038
JBrowse link
G ITIH5 inter-alpha-trypsin inhibitor heavy chain 5 involved_in IEA InterPro GO_REF:0000002 NCBI chr10:7,589,897...7,697,190
Ensembl chr10:7,570,497...7,677,254
JBrowse link
G ITIH6 inter-alpha-trypsin inhibitor heavy chain family member 6 involved_in IEA InterPro GO_REF:0000002 NCBI chr  X:46,957,480...47,000,642
Ensembl chr  X:55,188,633...55,231,778
JBrowse link
G LOC103785234 hyaluronan synthase 2-like involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:121,341,839...121,344,439 JBrowse link
G TNFAIP6 TNF alpha induced protein 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2B:38,669,652...38,692,037
Ensembl chr2B:155,933,842...155,956,382
JBrowse link
keratan sulfate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B3GNT7 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2B:118,644,899...118,650,463 JBrowse link
G B4GALT4 beta-1,4-galactosyltransferase 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:116,329,595...116,358,779
Ensembl chr 3:123,241,676...123,270,806
JBrowse link
G CHST1 carbohydrate sulfotransferase 1 involved_in ISO (PMID:17690104) UniProt PMID:17690104 NCBI chr11:45,604,605...45,621,332 JBrowse link
G CHST4 carbohydrate sulfotransferase 4 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr16:53,472,432...53,485,605
Ensembl chr16:71,373,703...71,374,863
JBrowse link
G CHST5 carbohydrate sulfotransferase 5 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr16:56,097,770...56,105,546
Ensembl chr16:75,446,349...75,447,584
JBrowse link
G CHST6 carbohydrate sulfotransferase 6 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr16:56,041,518...56,062,463
Ensembl chr16:75,394,187...75,395,374
JBrowse link
keratan sulfate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GNS glucosamine (N-acetyl)-6-sulfatase ISO RGD PMID:3161730 RGD:1600571 NCBI chr12:24,164,127...24,209,963
Ensembl chr12:24,667,603...24,712,939
JBrowse link
keratan sulfate metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CHST1 carbohydrate sulfotransferase 1 involved_in ISO (PMID:9405439) UniProt PMID:9405439 NCBI chr11:45,604,605...45,621,332 JBrowse link
negative regulation of hyaluronan biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AP2A1 adaptor related protein complex 2 subunit alpha 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:46,779,196...46,820,055
Ensembl chr19:55,694,070...55,736,570
JBrowse link
G CLTC clathrin heavy chain involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:53,685,865...53,761,008
Ensembl chr17:58,529,750...58,603,636
JBrowse link
G SMPD3 sphingomyelin phosphodiesterase 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:22383528) Ensembl
MGI
PMID:22383528 GO_REF:0000107 NCBI chr16:48,734,664...48,825,241
Ensembl chr16:68,131,905...68,142,871
JBrowse link
G TGFB1 transforming growth factor beta 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:38,324,009...38,347,003
Ensembl chr19:46,831,659...46,852,973
JBrowse link
peptidoglycan catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LYG1 lysozyme g1 involved_in IEA InterPro GO_REF:0000002 NCBI chr2A:99,993,738...100,014,140
Ensembl chr2A:100,214,192...100,234,941
JBrowse link
G LYG2 lysozyme g2 involved_in IEA InterPro GO_REF:0000002 NCBI chr2A:100,042,412...100,056,633
Ensembl chr2A:100,172,021...100,186,309
JBrowse link
G PGLYRP1 peptidoglycan recognition protein 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr19:43,033,080...43,037,726
Ensembl chr19:51,569,275...51,573,764
JBrowse link
G PGLYRP2 peptidoglycan recognition protein 2 involved_in IEA InterPro GO_REF:0000002 NCBI chr19:14,999,893...15,012,376
Ensembl chr19:15,986,090...15,997,726
JBrowse link
G PGLYRP3 peptidoglycan recognition protein 3 involved_in IEA InterPro GO_REF:0000002 NCBI chr 1:128,642,034...128,656,082
Ensembl chr 1:132,270,957...132,283,860
JBrowse link
G PGLYRP4 peptidoglycan recognition protein 4 involved_in IEA InterPro GO_REF:0000002 NCBI chr 1:128,681,726...128,700,275
Ensembl chr 1:132,310,256...132,329,013
JBrowse link
peptidoglycan turnover term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GCKR glucokinase regulator involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr2A:27,497,938...27,530,650
Ensembl chr2A:27,587,077...27,613,927
JBrowse link
positive regulation of hyaluronan biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EGF epidermal growth factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:102,410,724...102,509,691
Ensembl chr 4:112,977,565...113,076,460
JBrowse link
G HAS2 hyaluronan synthase 2 ISO RGD PMID:12186949 PMID:17080198 RGD:9588629 RGD:9588632 NCBI chr 8:118,313,186...118,342,160
Ensembl chr 8:121,072,154...121,089,365
JBrowse link
G NFKB1 nuclear factor kappa B subunit 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:94,925,048...95,040,849
Ensembl chr 4:105,589,062...105,704,098
JBrowse link
G PDGFB platelet derived growth factor subunit B involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:20,127,223...20,148,407
Ensembl chr22:37,944,018...37,964,883
JBrowse link
G PTGER4 prostaglandin E receptor 4 ISO RGD PMID:17080198 RGD:9588632 NCBI chr 5:69,686,906...69,700,739
Ensembl chr 5:74,731,470...74,745,148
JBrowse link
regulation of hyaluronan biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SMPD3 sphingomyelin phosphodiesterase 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:22383528) Ensembl
MGI
PMID:22383528 GO_REF:0000107 NCBI chr16:48,734,664...48,825,241
Ensembl chr16:68,131,905...68,142,871
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 16313
    metabolic process 10179
      organic substance metabolic process 9739
        macromolecule metabolic process 8210
          aminoglycan metabolic process 116
            glycosaminoglycan metabolic process 103
              galactosaminoglycan metabolic process + 0
              glycosaminoglycan biosynthetic process + 61
              glycosaminoglycan catabolic process + 27
              mucopolysaccharide metabolic process + 83
              peptidoglycan metabolic process + 7
paths to the root