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ONTOLOGY REPORT - ANNOTATIONS


Term:heparan sulfate proteoglycan catabolic process
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Accession:GO:0030200 term browser browse the term
Definition:The chemical reactions and pathways resulting in the breakdown of proteoglycan containing heparan sulfate, any member of a group of glycosaminoglycans that have repeat units consisting of alternating alpha-(1->4) linked hexuronic acid and glucosamine residues, the former being a mixture of sulfated and nonsulfated D-glucuronic and L-iduronic acids, and the latter being either sulfated or acetylated on its amino group as well as sulfated on one of its hydroxyl groups.
Synonyms:exact_synonym: heparan sulfate proteoglycan breakdown;   heparan sulfate proteoglycan catabolism;   heparan sulfate proteoglycan degradation;   heparan sulphate proteoglycan catabolic process;   heparan sulphate proteoglycan catabolism
 related_synonym: heparin proteoglycan catabolic process


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heparan sulfate proteoglycan catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07030903.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr10:108,469,856...108,473,377 JBrowse link
G Gpc1 glypican 1 involved_in ISO
ISS
IEA
(PMID:12732622)
GO_REF:0000024
GO_REF:0000107
RGD
UniProt
Ensembl
PMID:12732622 GO_REF:0000024 GO_REF:0000107 NCBI chr 9:99,998,275...100,026,818
Ensembl chr 9:99,998,275...100,026,818
JBrowse link
G Hpse heparanase involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:12213822)
UniProt
Ensembl
RGD
PMID:12213822 GO_REF:0000024 GO_REF:0000107 NCBI chr14:10,534,358...10,576,686
Ensembl chr14:10,534,423...10,575,224
JBrowse link
G Sgsh N-sulfoglucosamine sulfohydrolase involved_in ISO (PMID:15146460) RGD PMID:15146460 NCBI chr10:108,469,312...108,479,094 JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19610
    metabolic process 11878
      primary metabolic process 10634
        protein metabolic process 5967
          glycoprotein metabolic process 362
            proteoglycan metabolic process 78
              proteoglycan catabolic process 5
                heparan sulfate proteoglycan catabolic process 4
Path 2
Term Annotations click to browse term
  biological_process 19610
    metabolic process 11878
      organic substance metabolic process 11408
        macromolecule metabolic process 9863
          protein metabolic process 5967
            protein catabolic process 1006
              glycoprotein catabolic process 25
                proteoglycan catabolic process 5
                  heparan sulfate proteoglycan catabolic process 4
paths to the root