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ONTOLOGY REPORT - ANNOTATIONS


Term:neuron differentiation
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Accession:GO:0030182 term browser browse the term
Definition:The process in which a relatively unspecialized cell acquires specialized features of a neuron.


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neuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abl1 ABL proto-oncogene 1, non-receptor tyrosine kinase ISO (MGI:MGI:1327082|PMID:9883720) MGI PMID:9883720 MGI:MGI:1327082 NCBI chrNW_004936487:17,690,206...17,819,619 JBrowse link
G Abl2 ABL proto-oncogene 2, non-receptor tyrosine kinase ISO (MGI:MGI:1327082|PMID:9883720) MGI PMID:9883720 MGI:MGI:1327082 NCBI chrNW_004936481:9,823,790...9,847,291 JBrowse link
G Acsl4 acyl-CoA synthetase long chain family member 4 ISO (MGI:MGI:5316151|PMID:22366036) MGI PMID:22366036 MGI:MGI:5316151 NCBI chrNW_004936499:5,456,985...5,540,115 JBrowse link
G Adnp2 ADNP homeobox 2 ISO (MGI:MGI:3793419|PMID:18179478) UniProtKB PMID:18179478 MGI:MGI:3793419 NCBI chrNW_004936616:124,590...145,944 JBrowse link
G Aifm1 apoptosis inducing factor mitochondria associated 1 ISO (PMID:20111043) UniProtKB PMID:20111043 NCBI chrNW_004936479:1,441,508...1,477,133 JBrowse link
G Ak1 adenylate kinase 1 ISO RGD PMID:10101232 RGD:727267 NCBI chrNW_004936487:15,507,663...15,517,401 JBrowse link
G Aldh1a2 aldehyde dehydrogenase 1 family member A2 ISO (MGI:MGI:3530707|PMID:15652703)
(MGI:MGI:3574740|PMID:15753214)
MGI PMID:15652703, PMID:15753214 MGI:MGI:3530707, MGI:MGI:3574740 NCBI chrNW_004936471:19,175,997...19,263,335 JBrowse link
G Ascl1 achaete-scute family bHLH transcription factor 1 ISO (MGI:MGI:3778596|PMID:18184563), (MGI:MGI:5897542|PMID:24243019)
(MGI:MGI:3045910|PMID:15133515), (MGI:MGI:3639051|PMID:16469766)
(MGI:MGI:3042488|PMID:15071116)
UniProt
MGI
PMID:15071116, PMID:15133515, PMID:16469766, PMID:18184563, PMID:24243019 MGI:MGI:3042488, MGI:MGI:3045910, MGI:MGI:3639051, MGI:MGI:3778596, MGI:MGI:5897542 NCBI chrNW_004936492:11,315,929...11,317,166 JBrowse link
G Atf4 activating transcription factor 4 ISO RGD PMID:19322020 RGD:11354958 NCBI chrNW_004936492:2,114,478...2,115,969 JBrowse link
G Atoh1 atonal bHLH transcription factor 1 ISO (MGI:MGI:3042554|PMID:14999071) MGI PMID:14999071 MGI:MGI:3042554 NCBI chrNW_004936687:1,435,977...1,437,138 JBrowse link
G Atp2b2 ATPase plasma membrane Ca2+ transporting 2 ISO (PMID:11259493) UniProtKB PMID:11259493 NCBI chrNW_004936602:2,744,757...3,011,051 JBrowse link
G Bag1 BAG cochaperone 1 ISO (MGI:MGI:2389593|PMID:11965493) MGI PMID:11965493 MGI:MGI:2389593 NCBI chrNW_004936524:1,793,001...1,804,145 JBrowse link
G Baiap2 BAR/IMD domain containing adaptor protein 2 ISO RGD PMID:25586189 RGD:11576287 NCBI chrNW_004936594:4,797,068...4,863,409 JBrowse link
G Barhl2 BarH like homeobox 2 ISO (MGI:MGI:2654373|PMID:12657654)
(MGI:MGI:3039051|PMID:14998930)
MGI PMID:12657654, PMID:14998930 MGI:MGI:2654373, MGI:MGI:3039051 NCBI chrNW_004936537:8,129,213...8,134,744 JBrowse link
G Bhlhe22 basic helix-loop-helix family member e22 ISO (MGI:MGI:3703109|PMID:17092954) MGI PMID:17092954 MGI:MGI:3703109 NCBI chrNW_004936496:9,085,894...9,087,623 JBrowse link
G Brsk1 BR serine/threonine kinase 1 ISO (MGI:MGI:3528781|PMID:15705853) MGI PMID:15705853 MGI:MGI:3528781 NCBI chrNW_004936886:541,831...567,197 JBrowse link
G Brsk2 BR serine/threonine kinase 2 ISO (MGI:MGI:3528781|PMID:15705853) MGI PMID:15705853 MGI:MGI:3528781 NCBI chrNW_004936816:307,736...335,953 JBrowse link
G Btg2 BTG anti-proliferation factor 2 ISO PMID:12360398 MGI
RGD
PMID:12360398, PMID:23000394 RGD:2289077, RGD:7257594 NCBI chrNW_004936567:1,310,525...1,314,469 JBrowse link
G Casp3 caspase 3 ISO RGD PMID:15248196 RGD:1358477 NCBI chrNW_004936554:4,571,072...4,593,765 JBrowse link
G Cdk5 cyclin dependent kinase 5 ISO PMID:8846918
(MGI:MGI:3607011|PMID:16237170)
UniProt
MGI
PMID:8846918, PMID:16237170 MGI:MGI:3607011, RGD:8554279 NCBI chrNW_004936527:6,478,934...6,483,848 JBrowse link
G Cdk5r1 cyclin dependent kinase 5 regulatory subunit 1 ISO PMID:8846918 UniProt PMID:8846918 RGD:8554279 NCBI chrNW_004936538:2,411,194...2,415,106 JBrowse link
G Cend1 cell cycle exit and neuronal differentiation 1 ISO (MGI:MGI:5490923|PMID:23658157) UniProtKB PMID:23658157 MGI:MGI:5490923 NCBI chrNW_004936888:554,859...557,759 JBrowse link
G Chat choline O-acetyltransferase ISO (MGI:MGI:3045889|PMID:12441053) MGI PMID:12441053 MGI:MGI:3045889 NCBI chrNW_004936728:653,654...702,433 JBrowse link
G Chrdl1 chordin like 1 ISO RGD PMID:14684875 RGD:1299653 NCBI chrNW_004936499:4,474,899...4,587,563 JBrowse link
G Cops2 COP9 signalosome subunit 2 ISO RGD PMID:12524175 RGD:634483 NCBI chrNW_004936471:11,412,147...11,437,056 JBrowse link
G Ctnnb1 catenin beta 1 ISO (MGI:MGI:5689084|PMID:25009587) ParkinsonsUK-UCL PMID:25009587 MGI:MGI:5689084 NCBI chrNW_004936473:29,999,542...30,034,610 JBrowse link
G Dapk3 death associated protein kinase 3 ISO RGD PMID:12445468 RGD:632627 NCBI chrNW_004936588:2,246,142...2,257,733 JBrowse link
G Ddit4 DNA damage inducible transcript 4 ISO PMID:21368030 UniProt PMID:21368030 RGD:8554300 NCBI chrNW_004936521:6,646,864...6,648,982 JBrowse link
G Dmd dystrophin ISO RGD PMID:8858620 RGD:12880361 NCBI chrNW_004936553:7,157,526...7,943,703 JBrowse link
G Dnmt1 DNA methyltransferase 1 ISO RGD PMID:19660178 RGD:9588289 NCBI chrNW_004936659:520,181...565,496 JBrowse link
G Dnmt3a DNA methyltransferase 3 alpha ISO RGD PMID:19660178 RGD:9588289 NCBI chrNW_004936493:6,963,406...7,013,256 JBrowse link
G Dok5 docking protein 5 ISO (MGI:MGI:2137764|PMID:11470823) MGI PMID:11470823 MGI:MGI:2137764 NCBI chrNW_004936514:1,073,067...1,219,340 JBrowse link
G Dpysl5 dihydropyrimidinase like 5 ISO RGD PMID:11034345 RGD:632608 NCBI chrNW_004936493:5,603,069...5,686,451 JBrowse link
G Drgx dorsal root ganglia homeobox ISO (MGI:MGI:3694508|PMID:16978876) MGI PMID:16978876 MGI:MGI:3694508 NCBI chrNW_004936728:892,814...923,089 JBrowse link
G Dync2h1 dynein cytoplasmic 2 heavy chain 1 ISO (MGI:MGI:5441704|PMID:21552265) MGI PMID:21552265 MGI:MGI:5441704 NCBI chrNW_004936551:4,584,438...4,913,829 JBrowse link
G Edn3 endothelin 3 ISO (MGI:MGI:1267304|PMID:9624616) MGI PMID:9624616 MGI:MGI:1267304 NCBI chrNW_004936530:1,744,216...1,766,602 JBrowse link
G Efna1 ephrin A1 ISO (MGI:MGI:3050703|PMID:15145949) MGI PMID:15145949 MGI:MGI:3050703 NCBI chrNW_004936580:4,654,503...4,660,950 JBrowse link
G Elavl4 ELAV like RNA binding protein 4 ISO RGD PMID:9514914 RGD:9685344 NCBI chrNW_004936522:10,349,684...10,435,963 JBrowse link
G Emx1 empty spiracles homeobox 1 ISO (MGI:MGI:2451205|PMID:12561075) MGI PMID:12561075 MGI:MGI:2451205 NCBI chrNW_004936491:16,745,310...16,762,422 JBrowse link
G Emx2 empty spiracles homeobox 2 ISO (MGI:MGI:2451205|PMID:12561075) MGI PMID:12561075 MGI:MGI:2451205 NCBI chrNW_004936486:7,313,689...7,319,971 JBrowse link
G En1 engrailed homeobox 1 ISO (MGI:MGI:3522127|PMID:15340832), (MGI:MGI:3525936|PMID:15607945), (MGI:MGI:3578062|PMID:15175251) MGI PMID:15175251, PMID:15340832, PMID:15607945 MGI:MGI:3522127, MGI:MGI:3525936, MGI:MGI:3578062 NCBI chrNW_004936469:51,439,944...51,451,194 JBrowse link
G En2 engrailed homeobox 2 ISO (MGI:MGI:3522127|PMID:15340832), (MGI:MGI:3525936|PMID:15607945), (MGI:MGI:3578062|PMID:15175251) MGI PMID:15175251, PMID:15340832, PMID:15607945 MGI:MGI:3522127, MGI:MGI:3525936, MGI:MGI:3578062 NCBI chrNW_004936527:9,787,174...9,791,422 JBrowse link
G Eomes eomesodermin ISO (MGI:MGI:3806373|PMID:18794345) MGI PMID:18794345 MGI:MGI:3806373 NCBI chrNW_004936473:18,825,969...18,833,179 JBrowse link
G Epha2 EPH receptor A2 ISO (MGI:MGI:3050703|PMID:15145949) MGI PMID:15145949 MGI:MGI:3050703 NCBI chrNW_004936474:3,648,395...3,673,856 JBrowse link
G Ercc6 ERCC excision repair 6, chromatin remodeling factor ISO (PMID:24874740) UniProt PMID:24874740 NCBI chrNW_004936728:706,499...843,447 JBrowse link
G Fut9 fucosyltransferase 9 ISO (PMID:17335083) UniProt PMID:17335083 NCBI chrNW_004936699:1,428,131...1,612,294 JBrowse link
G Gas7 growth arrest specific 7 ISO (MGI:MGI:3698406|PMID:15725398) MGI PMID:15725398 MGI:MGI:3698406 NCBI chrNW_004936595:2,890,336...3,011,314 JBrowse link
G Gata2 GATA binding protein 2 ISO (MGI:MGI:3035845|PMID:14973276) MGI PMID:14973276 MGI:MGI:3035845 NCBI chrNW_004936798:406,258...414,785 JBrowse link
G Gata3 GATA binding protein 3 ISO (MGI:MGI:4836772|PMID:20818386) MGI PMID:20818386 MGI:MGI:4836772 NCBI chrNW_004936484:6,780,692...6,800,883 JBrowse link
G Gdnf glial cell derived neurotrophic factor ISO RGD PMID:15109990 RGD:1358711 NCBI chrNW_004936518:4,291,391...4,310,752 JBrowse link
G Gfra1 GDNF family receptor alpha 1 ISO RGD PMID:21865882 RGD:6218962 NCBI chrNW_004936486:6,066,108...6,262,055 JBrowse link
G Gpc2 glypican 2 ISO RGD PMID:8294498 RGD:728608 NCBI chrNW_004936543:424,244...429,903 JBrowse link
G Hdac1 histone deacetylase 1 ISO (MGI:MGI:3844761|PMID:19380719) MGI PMID:19380719 MGI:MGI:3844761 NCBI chrNW_004936474:15,320,635...15,351,418 JBrowse link
G Hdac2 histone deacetylase 2 ISO (MGI:MGI:3844761|PMID:19380719) MGI PMID:19380719 MGI:MGI:3844761 NCBI chrNW_004936679:2,448,676...2,474,641 JBrowse link
G Hdac5 histone deacetylase 5 ISO RGD PMID:12850547 RGD:704464 NCBI chrNW_004936541:561,721...598,915 JBrowse link
G Hdac6 histone deacetylase 6 ISO RGD PMID:12850547 RGD:704464 NCBI chrNW_004936721:757,500...778,416 JBrowse link
G Hdac7 histone deacetylase 7 ISO RGD PMID:12850547 RGD:704464 NCBI chrNW_004936512:5,680,564...5,701,182 JBrowse link
G Hdac9 histone deacetylase 9 ISO RGD PMID:12850547 RGD:704464 NCBI chrNW_004936546:4,398,003...5,247,649 JBrowse link
G Helt helt bHLH transcription factor ISO (MGI:MGI:3042488|PMID:15071116) MGI PMID:15071116 MGI:MGI:3042488 NCBI chrNW_004936554:4,245,684...4,247,832 JBrowse link
G Hes1 hes family bHLH transcription factor 1 ISO RGD PMID:9634594 RGD:9685379 NCBI chrNW_004936711:640,002...642,580 JBrowse link
G Hes5 hes family bHLH transcription factor 5 ISO RGD PMID:1400497 RGD:728403 NCBI chrNW_004936737:1,045,496...1,047,865 JBrowse link
G Hipk1 homeodomain interacting protein kinase 1 ISO (MGI:MGI:4818711|PMID:20579985) DFLAT PMID:20579985 MGI:MGI:4818711 NCBI chrNW_004936690:2,293,740...2,353,450 JBrowse link
G Hipk2 homeodomain interacting protein kinase 2 ISO (MGI:MGI:4818711|PMID:20579985) DFLAT PMID:20579985 MGI:MGI:4818711 NCBI chrNW_004936592:3,800,619...3,934,347 JBrowse link
G Hoxc8 homeobox C8 ISO (MGI:MGI:3574740|PMID:15753214) MGI PMID:15753214 MGI:MGI:3574740 NCBI chrNW_004936512:11,231,467...11,234,515 JBrowse link
G Hoxd1 homeobox D1 ISO (MGI:MGI:4946448|PMID:21151121) MGI PMID:21151121 MGI:MGI:4946448 NCBI chrNW_004936509:5,673,184...5,674,636 JBrowse link
G Hspa1a heat shock protein family A (Hsp70) member 1A ISO RGD PMID:23000394 RGD:7257594 NCBI chrNW_004936727:1,732,323...1,735,128 JBrowse link
G Hspa5 heat shock protein family A (Hsp70) member 5 ISO RGD PMID:19322020 RGD:11354958 NCBI chrNW_004936487:13,348,465...13,352,717 JBrowse link
G Id1 inhibitor of DNA binding 1, HLH protein ISO RGD PMID:7908517 RGD:729182 NCBI chrNW_004936485:18,610,721...18,611,889 JBrowse link
G Id2 inhibitor of DNA binding 2 ISO RGD PMID:7908517 RGD:729182 NCBI chrNW_004936532:5,236,175...5,238,689 JBrowse link
G Id3 inhibitor of DNA binding 3, HLH protein ISO RGD PMID:7908517 RGD:729182 NCBI chrNW_004936474:8,758,098...8,759,684 JBrowse link
G Ier2 immediate early response 2 ISO PMID:17156131 UniProt PMID:17156131 RGD:10054080 NCBI chrNW_004936659:2,176,962...2,179,900 JBrowse link
G Isl1 ISL LIM homeobox 1 ISO (MGI:MGI:3790180|PMID:18434416)
(MGI:MGI:78615|PMID:8565076)
(MGI:MGI:3778709|PMID:18367596)
MGI PMID:8565076, PMID:18367596, PMID:18434416 MGI:MGI:3778709, MGI:MGI:3790180, MGI:MGI:78615 NCBI chrNW_004936480:15,805,259...15,817,854 JBrowse link
G Itm2c integral membrane protein 2C ISO (PMID:18452648) UniProtKB PMID:18452648 NCBI chrNW_004936525:5,913,913...5,927,385 JBrowse link
G Kdm2a lysine demethylase 2A ISO (MGI:MGI:5615026|PMID:25463925) MGI PMID:25463925 MGI:MGI:5615026 NCBI chrNW_004936599:2,466,427...2,576,623 JBrowse link
G L1cam L1 cell adhesion molecule ISO RGD PMID:24841827 RGD:11570515 NCBI chrNW_004936809:736,385...768,822 JBrowse link
G Ldb1 LIM domain binding 1 ISO (PMID:8876198) UniProtKB PMID:8876198 NCBI chrNW_004936600:3,714,630...3,728,813 JBrowse link
G Lhx2 LIM homeobox 2 ISO (MGI:MGI:3044864|PMID:15173589) RGD
MGI
PMID:7678338, PMID:15173589 MGI:MGI:3044864, RGD:70777 NCBI chrNW_004936487:12,395,817...12,413,860 JBrowse link
G Lmx1a LIM homeobox transcription factor 1 alpha ISO (MGI:MGI:3051929|PMID:15183721) MGI PMID:15183721 MGI:MGI:3051929 NCBI chrNW_004936481:19,863,487...19,984,299 JBrowse link
G Lmx1b LIM homeobox transcription factor 1 beta ISO (MGI:MGI:2675692|PMID:12897786), (MGI:MGI:3051709|PMID:15229182) MGI PMID:12897786, PMID:15229182 MGI:MGI:2675692, MGI:MGI:3051709 NCBI chrNW_004936487:14,513,303...14,587,771 JBrowse link
G LOC101956766 interleukin-1 receptor accessory protein-like 1 ISO (MGI:MGI:5294265|PMID:21940441) BHF-UCL PMID:21940441 MGI:MGI:5294265 NCBI chrNW_004936553:6,055,190...6,099,427 JBrowse link
G LOC101964395 receptor-type tyrosine-protein phosphatase R ISO RGD PMID:7814416 RGD:729713 NCBI chrNW_004936545:8,268,227...8,377,427 JBrowse link
G LOC101977674 oligophrenin-1 ISO (PMID:27160703) ARUK-UCL PMID:27160703 NCBI chrNW_004936635:6,966...243,209 JBrowse link
G Map2k1 mitogen-activated protein kinase kinase 1 ISO (MGI:MGI:3050703|PMID:15145949) RGD
MGI
PMID:15145949, PMID:17202850 MGI:MGI:3050703, RGD:2292642 NCBI chrNW_004936471:26,589,251...26,628,302 JBrowse link
G Mbd1 methyl-CpG binding domain protein 1 ISO RGD PMID:19660178 RGD:9588289 NCBI chrNW_004936497:12,848,918...12,868,504 JBrowse link
G Mecp2 methyl-CpG binding protein 2 ISO (MGI:MGI:3629530|PMID:15345242) RGD
MGI
PMID:12605461, PMID:15345242 MGI:MGI:3629530, RGD:12790706 NCBI chrNW_004936809:902,938...967,771 JBrowse link
G Mef2c myocyte enhancer factor 2C ISO (MGI:MGI:3804505|PMID:18599437)
(PMID:8455629)
UniProtKB PMID:8455629, PMID:18599437 MGI:MGI:3804505 NCBI chrNW_004936469:7,060,480...7,225,497 JBrowse link
G Mnx1 motor neuron and pancreas homeobox 1 ISO (MGI:MGI:1935007|PMID:11395002) MGI PMID:11395002 MGI:MGI:1935007 NCBI chrNW_004936797:618,696...623,219 JBrowse link
G Myef2 myelin expression factor 2 ISO (PMID:8455629) UniProtKB PMID:8455629 NCBI chrNW_004936471:10,492,548...10,519,549 JBrowse link
G Myt1l myelin transcription factor 1 like ISO (MGI:MGI:5897487|PMID:28379941), (MGI:MGI:5897542|PMID:24243019) UniProtKB PMID:24243019, PMID:28379941 MGI:MGI:5897487, MGI:MGI:5897542 NCBI chrNW_004936532:557,680...916,082 JBrowse link
G Napa NSF attachment protein alpha ISO (MGI:MGI:3033551|PMID:14758363) MGI PMID:14758363 MGI:MGI:3033551 NCBI chrNW_004936664:1,155,557...1,178,626 JBrowse link
G Ndn necdin, MAGE family member ISO (MGI:MGI:2389520|PMID:12198120) MGI PMID:12198120 MGI:MGI:2389520 NCBI chrNW_004936805:849,218...850,894 JBrowse link
G Neurog1 neurogenin 1 ISO (MGI:MGI:5467435|PMID:23288605)
(MGI:MGI:3607238|PMID:16145671)
MGI PMID:16145671, PMID:23288605 MGI:MGI:3607238, MGI:MGI:5467435 NCBI chrNW_004936597:2,708,001...2,709,702 JBrowse link
G Neurog2 neurogenin 2 ISO (MGI:MGI:3612225|PMID:16396906) MGI PMID:16396906 MGI:MGI:3612225 NCBI chrNW_004936563:3,348,052...3,350,623 JBrowse link
G Nif3l1 NGG1 interacting factor 3 like 1 ISO (MGI:MGI:5619492|PMID:12522100) UniProtKB PMID:12522100 MGI:MGI:5619492 NCBI chrNW_004936726:194,873...212,487 JBrowse link
G Nnat neuronatin ISO RGD PMID:8949924 RGD:1358323 NCBI chrNW_004936561:3,739,664...3,744,015 JBrowse link
G Notch1 notch receptor 1 ISO (MGI:MGI:86734|PMID:9102301) MGI PMID:9102301 MGI:MGI:86734 NCBI chrNW_004936669:1,292,016...1,334,061 JBrowse link
G Nr4a2 nuclear receptor subfamily 4 group A member 2 ISO (MGI:MGI:1202150|PMID:9520484), (MGI:MGI:3041641|PMID:14622207) MGI PMID:9520484, PMID:14622207 MGI:MGI:1202150, MGI:MGI:3041641 NCBI chrNW_004936469:21,912,118...21,920,486 JBrowse link
G Nrbp2 nuclear receptor binding protein 2 ISO (PMID:18619852) UniProtKB PMID:18619852 NCBI chrNW_004936470:8,327,326...8,333,573 JBrowse link
G Ntrk2 neurotrophic receptor tyrosine kinase 2 ISO (MGI:MGI:3776308|PMID:15372074) UniProtKB PMID:15372074 MGI:MGI:3776308 NCBI chrNW_004936680:267,850...621,467 JBrowse link
G Otx2 orthodenticle homeobox 2 ISO (MGI:MGI:3578035|PMID:15888661) MGI PMID:15888661 MGI:MGI:3578035 NCBI chrNW_004936495:1,433,124...1,449,409 JBrowse link
G Parl presenilin associated rhomboid like ISO RGD PMID:14732705 RGD:12880444 NCBI chrNW_004936578:5,945,765...5,992,972 JBrowse link
G Pcsk9 proprotein convertase subtilisin/kexin type 9 ISO (MGI:MGI:2450048|PMID:12552133)
(MGI:MGI:3696588|PMID:16893422)
HGNC PMID:12552133, PMID:16893422 MGI:MGI:2450048, MGI:MGI:3696588 NCBI chrNW_004936522:6,271,339...6,300,202 JBrowse link
G Phox2b paired like homeobox 2B ISO (MGI:MGI:3797655|PMID:18506029) MGI PMID:18506029 MGI:MGI:3797655 NCBI chrNW_004936482:8,972,433...8,975,284 JBrowse link
G Pigt phosphatidylinositol glycan anchor biosynthesis class T ISO (MGI:MGI:3621592|PMID:16516892) MGI PMID:16516892 MGI:MGI:3621592 NCBI chrNW_004936514:7,471,134...7,481,183 JBrowse link
G Pin1 peptidylprolyl cis/trans isomerase, NIMA-interacting 1 ISO (MGI:MGI:5432836|PMID:22645310) ParkinsonsUK-UCL PMID:22645310 MGI:MGI:5432836 NCBI chrNW_004936659:309,530...321,294 JBrowse link
G Pitx2 paired like homeodomain 2 ISO RGD PMID:16408195 RGD:5131998 NCBI chrNW_004936563:1,713,294...1,732,431 JBrowse link
G Pou3f2 POU class 3 homeobox 2 ISO (MGI:MGI:3703099|PMID:17141158), (MGI:MGI:5897542|PMID:24243019) UniProtKB PMID:17141158, PMID:24243019 MGI:MGI:3703099, MGI:MGI:5897542 NCBI chrNW_004936651:494,182...497,109 JBrowse link
G Pou4f1 POU class 4 homeobox 1 ISO (MGI:MGI:3587126|PMID:16040009) MGI PMID:16040009 MGI:MGI:3587126 NCBI chrNW_004936511:2,857,017...2,859,705 JBrowse link
G Pou4f2 POU class 4 homeobox 2 ISO (MGI:MGI:3621691|PMID:9630743)
(MGI:MGI:80981|PMID:8637595)
(MGI:MGI:3790171|PMID:18434421)
MGI PMID:8637595, PMID:9630743, PMID:18434421 MGI:MGI:3621691, MGI:MGI:3790171, MGI:MGI:80981 NCBI chrNW_004936535:2,705,184...2,711,785 JBrowse link
G Ppia peptidylprolyl isomerase A ISO (MGI:MGI:3640624|PMID:16352598) MGI PMID:16352598 MGI:MGI:3640624 NCBI chrNW_004936478:19,669,727...19,673,355 JBrowse link
G Ppp1cc protein phosphatase 1 catalytic subunit gamma ISO PMID:17202132 MGI PMID:17202132 RGD:8553329 NCBI chrNW_004936558:3,631,794...3,651,754 JBrowse link
G Ppp2r2b protein phosphatase 2 regulatory subunit Bbeta ISO RGD PMID:12716901 RGD:2314541 NCBI chrNW_004936504:7,655,924...8,097,125 JBrowse link
G Prkcq protein kinase C theta ISO RGD PMID:10944456 RGD:1625618 NCBI chrNW_004936484:8,048,239...8,166,058 JBrowse link
G Psd pleckstrin and Sec7 domain containing ISO RGD PMID:11834294 RGD:632586 NCBI chrNW_004936600:3,449,240...3,464,938 JBrowse link
G Psen1 presenilin 1 ISO (MGI:MGI:1858528|PMID:10821758) MGI PMID:10821758 MGI:MGI:1858528 NCBI chrNW_004936488:2,464,623...2,528,807 JBrowse link
G Ptprd protein tyrosine phosphatase receptor type D ISO (MGI:MGI:5294265|PMID:21940441) BHF-UCL PMID:21940441 MGI:MGI:5294265 NCBI chrNW_004936539:2,564,815...3,369,975 JBrowse link
G Rb1 RB transcriptional corepressor 1 ISO (MGI:MGI:3664376|PMID:7958874) MGI PMID:7958874 MGI:MGI:3664376 NCBI chrNW_004936565:1,596,227...1,746,706 JBrowse link
G Rbpj recombination signal binding protein for immunoglobulin kappa J region ISO (MGI:MGI:86734|PMID:9102301) MGI PMID:9102301 MGI:MGI:86734 NCBI chrNW_004936477:3,354,336...3,445,248 JBrowse link
G Rest RE1 silencing transcription factor ISO RGD PMID:24841827 RGD:11570515 NCBI chrNW_004936482:19,018,454...19,040,438 JBrowse link
G Ret ret proto-oncogene ISO (MGI:MGI:3761419|PMID:17553423) MGI PMID:17553423 MGI:MGI:3761419 NCBI chrNW_004936617:2,927,185...2,980,594 JBrowse link
G Rnf112 ring finger protein 112 ISO (MGI:MGI:6154408|PMID:28684796)
(PMID:28684796)
UniProtKB PMID:28684796 MGI:MGI:6154408 NCBI chrNW_004936881:343,625...349,564 JBrowse link
G Rtn1 reticulon 1 ISO (PMID:9560466) UniProtKB PMID:9560466 NCBI chrNW_004936495:3,933,652...4,158,269 JBrowse link
G Rxrg retinoid X receptor gamma ISO RGD PMID:15664689 RGD:2325974 NCBI chrNW_004936481:19,789,753...19,826,665 JBrowse link
G Ryk receptor like tyrosine kinase ISO (MGI:MGI:3822212|PMID:19000841) UniProtKB PMID:19000841 MGI:MGI:3822212 NCBI chrNW_004936529:7,273,070...7,344,372 JBrowse link
G S1pr1 sphingosine-1-phosphate receptor 1 ISO RGD PMID:7959012 RGD:61573 NCBI chrNW_004936748:1,244,962...1,250,093 JBrowse link
G Shc1 SHC adaptor protein 1 ISO RGD PMID:17274988 RGD:1643181 NCBI chrNW_004936580:4,511,560...4,522,003 JBrowse link
G Smarca1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 ISO (MGI:MGI:3690152|PMID:14609955) UniProtKB PMID:14609955 MGI:MGI:3690152 NCBI chrNW_004936479:2,030,788...2,110,501 JBrowse link
G Snap25 synaptosome associated protein 25 ISO RGD PMID:24841827 RGD:11570515 NCBI chrNW_004936485:9,198,744...9,279,854 JBrowse link
G Snph syntaphilin ISO RGD PMID:12941459 RGD:2315037 NCBI chrNW_004936485:17,357,389...17,370,664 JBrowse link
G Sox11 SRY-box transcription factor 11 ISO (PMID:10574465) UniProtKB PMID:10574465 NCBI chrNW_004937107:203,120...207,185 JBrowse link
G St8sia2 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 ISO RGD PMID:8703013 RGD:27372881 NCBI chrNW_004936483:10,278,843...10,343,177 JBrowse link
G Tal1 TAL bHLH transcription factor 1, erythroid differentiation factor ISO (MGI:MGI:3768218|PMID:16292311) MGI PMID:16292311 MGI:MGI:3768218 NCBI chrNW_004936474:28,049,326...28,061,495 JBrowse link
G Tbr1 T-box brain transcription factor 1 ISO (MGI:MGI:4818701|PMID:20615956) MGI PMID:20615956 MGI:MGI:4818701 NCBI chrNW_004936469:17,481,049...17,489,535 JBrowse link
G Tent2 terminal nucleotidyltransferase 2 ISO RGD PMID:23933240 RGD:9684963 NCBI chrNW_004936549:7,401,532...7,465,264 JBrowse link
G Tlx1 T cell leukemia homeobox 1 ISO (MGI:MGI:2179900|PMID:12023301) MGI PMID:12023301 MGI:MGI:2179900 NCBI chrNW_004936600:4,564,246...4,569,774 JBrowse link
G Tlx3 T cell leukemia homeobox 3 ISO (MGI:MGI:5432415|PMID:22787056)
(MGI:MGI:2179900|PMID:12023301)
MGI PMID:12023301, PMID:22787056 MGI:MGI:2179900, MGI:MGI:5432415 NCBI chrNW_004936609:3,772,432...3,774,554 JBrowse link
G Trappc9 trafficking protein particle complex 9 ISO (MGI:MGI:5697973|PMID:24011459) MGI PMID:24011459 MGI:MGI:5697973 NCBI chrNW_004936470:10,747,343...11,243,052 JBrowse link
G Trpc5 transient receptor potential cation channel subfamily C member 5 ISO RGD PMID:21618530 RGD:7495774 NCBI chrNW_004936499:3,391,386...3,541,406 JBrowse link
G Trpc6 transient receptor potential cation channel subfamily C member 6 ISO RGD PMID:20479868 RGD:10044014 NCBI chrNW_004936551:6,173,588...6,282,971 JBrowse link
G Tubb3 tubulin beta 3 class III ISO RGD PMID:12234689 RGD:1334485 NCBI chrNW_004936641:184,736...193,835 JBrowse link
G Vhl von Hippel-Lindau tumor suppressor ISO RGD PMID:20125055 RGD:2325181 NCBI chrNW_004936602:3,135,790...3,140,622 JBrowse link
G Vxn vexin ISO (MGI:MGI:6148384|PMID:29518376) UniProtKB PMID:29518376 MGI:MGI:6148384 NCBI chrNW_004936496:7,483,685...7,529,094 JBrowse link
G Wnt5a Wnt family member 5A ISO RGD PMID:16909041 RGD:2317898 NCBI chrNW_004936473:6,031,627...6,052,211 JBrowse link
G Wnt7b Wnt family member 7B ISO (PMID:12429992) UniProtKB PMID:12429992 NCBI chrNW_004936629:3,869,976...3,907,932 JBrowse link
G Xrn2 5'-3' exoribonuclease 2 ISO RGD PMID:23933240 RGD:9684963 NCBI chrNW_004936620:4,069,956...4,145,212 JBrowse link
amacrine cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxn4 forkhead box N4 ISO (MGI:MGI:3054139|PMID:15363391) UniProtKB PMID:15363391 MGI:MGI:3054139 NCBI chrNW_004936769:1,061,907...1,081,350 JBrowse link
G Ikzf1 IKAROS family zinc finger 1 ISO (MGI:MGI:5629913|PMID:25654255) MGI PMID:25654255 MGI:MGI:5629913 NCBI chrNW_004936686:1,459,582...1,556,478 JBrowse link
G Neurod1 neuronal differentiation 1 ISO (MGI:MGI:2158684|PMID:11861467) UniProtKB PMID:11861467 MGI:MGI:2158684 NCBI chrNW_004936509:10,421,821...10,425,927 JBrowse link
G Neurod4 neuronal differentiation 4 ISO (MGI:MGI:2158684|PMID:11861467) UniProtKB PMID:11861467 MGI:MGI:2158684 NCBI chrNW_004936891:471,576...482,195 JBrowse link
G Ptf1a pancreas associated transcription factor 1a ISO (MGI:MGI:3691257|PMID:17075007) UniProtKB PMID:17075007 MGI:MGI:3691257 NCBI chrNW_004936520:4,978,896...4,980,648 JBrowse link
G Rorb RAR related orphan receptor B ISO (MGI:MGI:5546314|PMID:23652001) UniProtKB PMID:23652001 MGI:MGI:5546314 NCBI chrNW_004936503:10,294,530...10,473,070 JBrowse link
anterior commissure morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bhlhe22 basic helix-loop-helix family member e22 ISO (MGI:MGI:5315201|PMID:22284184) MGI PMID:22284184 MGI:MGI:5315201 NCBI chrNW_004936496:9,085,894...9,087,623 JBrowse link
G Fbxo45 F-box protein 45 ISO (MGI:MGI:3849342|PMID:19398581) MGI PMID:19398581 MGI:MGI:3849342 NCBI chrNW_004936784:1,162,950...1,177,407 JBrowse link
G Nfib nuclear factor I B ISO (MGI:MGI:4453290|PMID:19961580) UniProtKB PMID:19961580 MGI:MGI:4453290 NCBI chrNW_004936539:7,763,036...8,185,001 JBrowse link
G Nr2e1 nuclear receptor subfamily 2 group E member 1 ISO (MGI:MGI:2151063|PMID:11997145) MGI PMID:11997145 MGI:MGI:2151063 NCBI chrNW_004936564:4,432,556...4,453,056 JBrowse link
G Plxna4 plexin A4 ISO (MGI:MGI:3578029|PMID:15814794) MGI PMID:15814794 MGI:MGI:3578029 NCBI chrNW_004936579:3,025,251...3,449,347 JBrowse link
G Tsku tsukushi, small leucine rich proteoglycan ISO (MGI:MGI:4848234|PMID:21055390) MGI PMID:21055390 MGI:MGI:4848234 NCBI chrNW_004936498:5,434,912...5,487,354 JBrowse link
anterior/posterior axon guidance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dcc DCC netrin 1 receptor ISO (MGI:MGI:3807817|PMID:18479186) MGI PMID:18479186 MGI:MGI:3807817 NCBI chrNW_004936497:10,122,078...11,169,900 JBrowse link
G Ntn1 netrin 1 ISO (MGI:MGI:3807817|PMID:18479186) MGI PMID:18479186 MGI:MGI:3807817 NCBI chrNW_004936595:2,146,371...2,323,346 JBrowse link
G Unc5a unc-5 netrin receptor A ISO (MGI:MGI:3807817|PMID:18479186) MGI PMID:18479186 MGI:MGI:3807817 NCBI chrNW_004936597:1,060,496...1,122,832 JBrowse link
G Unc5b unc-5 netrin receptor B ISO (MGI:MGI:3807817|PMID:18479186) MGI PMID:18479186 MGI:MGI:3807817 NCBI chrNW_004936521:7,472,788...7,547,408 JBrowse link
G Unc5c unc-5 netrin receptor C ISO (MGI:MGI:3807817|PMID:18479186) MGI PMID:18479186 MGI:MGI:3807817 NCBI chrNW_004936687:2,600,635...2,951,407 JBrowse link
auditory receptor cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clrn1 clarin 1 ISO (MGI:MGI:3849925|PMID:19414487) MGI PMID:19414487 MGI:MGI:3849925 NCBI chrNW_004936758:1,250,831...1,286,016 JBrowse link
G Fgfr1 fibroblast growth factor receptor 1 ISO (MGI:MGI:3527944|PMID:15630379) MGI PMID:15630379 MGI:MGI:3527944 NCBI chrNW_004936710:1,760,365...1,815,269 JBrowse link
G Pafah1b1 platelet activating factor acetylhydrolase 1b regulatory subunit 1 ISO (MGI:MGI:5477842|PMID:23533177) CACAO PMID:23533177 MGI:MGI:5477842 NCBI chrNW_004936538:8,612,142...8,693,698 JBrowse link
G Pdzd7 PDZ domain containing 7 ISO (MGI:MGI:5565635|PMID:24334608) MGI PMID:24334608 MGI:MGI:5565635 NCBI chrNW_004936600:4,660,211...4,678,911 JBrowse link
G Slc4a7 solute carrier family 4 member 7 ISO (MGI:MGI:2680888|PMID:12808454) MGI PMID:12808454 MGI:MGI:2680888 NCBI chrNW_004936473:18,550,489...18,645,470 JBrowse link
G Tmc1 transmembrane channel like 1 ISO (MGI:MGI:5320864|PMID:22105175) MGI PMID:22105175 MGI:MGI:5320864 NCBI chrNW_004936503:8,669,465...8,826,340 JBrowse link
auditory receptor cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Jag2 jagged canonical Notch ligand 2 ISO (MGI:MGI:1332721|PMID:10080181) UniProtKB PMID:10080181 MGI:MGI:1332721 NCBI chrNW_004936621:363,489...380,616 JBrowse link
G Notch1 notch receptor 1 ISO (MGI:MGI:3833041|PMID:19154718) MGI PMID:19154718 MGI:MGI:3833041 NCBI chrNW_004936669:1,292,016...1,334,061 JBrowse link
G Rbpj recombination signal binding protein for immunoglobulin kappa J region ISO (MGI:MGI:3833041|PMID:19154718) MGI PMID:19154718 MGI:MGI:3833041 NCBI chrNW_004936477:3,354,336...3,445,248 JBrowse link
auditory receptor cell fate determination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atoh1 atonal bHLH transcription factor 1 ISO (MGI:MGI:3611666|PMID:16407553) MGI PMID:16407553 MGI:MGI:3611666 NCBI chrNW_004936687:1,435,977...1,437,138 JBrowse link
auditory receptor cell fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atoh1 atonal bHLH transcription factor 1 ISO (MGI:MGI:1339217|PMID:10364557) MGI PMID:10364557 MGI:MGI:1339217 NCBI chrNW_004936687:1,435,977...1,437,138 JBrowse link
auditory receptor cell morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rac1 Rac family small GTPase 1 ISO (MGI:MGI:4430014|PMID:20016102) MGI PMID:20016102 MGI:MGI:4430014 NCBI chrNW_004936750:107,689...122,679 JBrowse link
G Scrib scribble planar cell polarity protein ISO (MGI:MGI:4439427|PMID:20215345) MGI PMID:20215345 MGI:MGI:4439427 NCBI chrNW_004936470:8,349,175...8,370,099 JBrowse link
G Sec24b SEC24 homolog B, COPII coat complex component ISO (MGI:MGI:4439427|PMID:20215345) MGI PMID:20215345 MGI:MGI:4439427 NCBI chrNW_004936563:676,564...772,877 JBrowse link
G Slitrk6 SLIT and NTRK like family member 6 ISO (MGI:MGI:4413621|PMID:19936227) MGI PMID:19936227 MGI:MGI:4413621 NCBI chrNW_004936866:412,719...419,381 JBrowse link
G Wdpcp WD repeat containing planar cell polarity effector ISO (MGI:MGI:5544506|PMID:24302887) MGI PMID:24302887 MGI:MGI:5544506 NCBI chrNW_004936491:8,238,644...8,749,172 JBrowse link
auditory receptor cell stereocilium organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp2b2 ATPase plasma membrane Ca2+ transporting 2 ISO (MGI:MGI:3709803|PMID:11875276) MGI PMID:11875276 MGI:MGI:3709803 NCBI chrNW_004936602:2,744,757...3,011,051 JBrowse link
G Cdh23 cadherin related 23 ISO (MGI:MGI:3526751|PMID:15537665)
(MGI:MGI:75953|PMID:7610888), (MGI:MGI:81497|PMID:8790740), (MGI:MGI:86134|PMID:9039475)
(MGI:MGI:3625226|PMID:12121736)
(MGI:MGI:1933915|PMID:11322776)
(MGI:MGI:1929001|PMID:11138008), (MGI:MGI:3686545|PMID:17050716), (MGI:MGI:5468200|PMID:23217710)
MGI PMID:7610888, PMID:8790740, PMID:9039475, PMID:11138008, PMID:11322776, PMID:12121736, PMID:15537665, PMID:17050716, PMID:23217710 MGI:MGI:1929001, MGI:MGI:1933915, MGI:MGI:3526751, MGI:MGI:3625226, MGI:MGI:3686545, MGI:MGI:5468200, MGI:MGI:75953, MGI:MGI:81497, MGI:MGI:86134 NCBI chrNW_004936521:7,078,874...7,285,361 JBrowse link
G Clic5 chloride intracellular channel 5 ISO (MGI:MGI:3663248|PMID:17021174) MGI PMID:17021174 MGI:MGI:3663248 NCBI chrNW_004936476:14,234,447...14,381,582 JBrowse link
G Clrn1 clarin 1 ISO (MGI:MGI:3849925|PMID:19414487), (MGI:MGI:4353469|PMID:19423712) MGI PMID:19414487, PMID:19423712 MGI:MGI:3849925, MGI:MGI:4353469 NCBI chrNW_004936758:1,250,831...1,286,016 JBrowse link
G Grxcr2 glutaredoxin and cysteine rich domain containing 2 ISO (MGI:MGI:6278501|PMID:30380417) MGI PMID:30380417 MGI:MGI:6278501 NCBI chrNW_004936504:8,775,832...8,789,254 JBrowse link
G Lhfpl5 LHFPL tetraspan subfamily member 5 ISO (MGI:MGI:3759710|PMID:17876667), (MGI:MGI:5468200|PMID:23217710)
(MGI:MGI:3578102|PMID:15905332)
MGI PMID:15905332, PMID:17876667, PMID:23217710 MGI:MGI:3578102, MGI:MGI:3759710, MGI:MGI:5468200 NCBI chrNW_004936476:23,479,939...23,491,611 JBrowse link
G LOC101965031 protocadherin-15 ISO (MGI:MGI:1928787|PMID:10978835)
(MGI:MGI:3619110|PMID:11124469)
(MGI:MGI:5468200|PMID:23217710)
(MGI:MGI:3526751|PMID:15537665)
(MGI:MGI:3654702|PMID:16887306)
MGI PMID:10978835, PMID:11124469, PMID:15537665, PMID:16887306, PMID:23217710 MGI:MGI:1928787, MGI:MGI:3526751, MGI:MGI:3619110, MGI:MGI:3654702, MGI:MGI:5468200 NCBI chrNW_004936910:233,800...602,145 JBrowse link
G Myo3a myosin IIIA ISO (MGI:MGI:5766107|PMID:26754646) MGI PMID:26754646 MGI:MGI:5766107 NCBI chrNW_004936484:1,509,248...1,723,717 JBrowse link
G Myo3b myosin IIIB ISO (MGI:MGI:5766107|PMID:26754646) MGI PMID:26754646 MGI:MGI:5766107 NCBI chrNW_004936509:615,958...1,074,742 JBrowse link
G Myo7a myosin VIIA ISO (MGI:MGI:3686545|PMID:17050716)
(MGI:MGI:3625226|PMID:12121736)
(MGI:MGI:2156358|PMID:11753415)
MGI PMID:11753415, PMID:12121736, PMID:17050716 MGI:MGI:2156358, MGI:MGI:3625226, MGI:MGI:3686545 NCBI chrNW_004936498:5,758,572...5,824,526 JBrowse link
G Pdzd7 PDZ domain containing 7 ISO (MGI:MGI:5565635|PMID:24334608) MGI PMID:24334608 MGI:MGI:5565635 NCBI chrNW_004936600:4,660,211...4,678,911 JBrowse link
G Pls1 plastin 1 ISO (MGI:MGI:5608770|PMID:25124451) UniProt PMID:25124451 MGI:MGI:5608770 NCBI chrNW_004936540:4,205,871...4,323,121 JBrowse link
G Rest RE1 silencing transcription factor ISO (MGI:MGI:6193260|PMID:29961578) UniProt PMID:29961578 MGI:MGI:6193260 NCBI chrNW_004936482:19,018,454...19,040,438 JBrowse link
G Ripor2 RHO family interacting cell polarization regulator 2 ISO (MGI:MGI:5789047|PMID:27269051) UniProtKB PMID:27269051 MGI:MGI:5789047 NCBI chrNW_004936671:1,064,937...1,232,985 JBrowse link
G Scrib scribble planar cell polarity protein ISO (MGI:MGI:4439427|PMID:20215345) MGI PMID:20215345 MGI:MGI:4439427 NCBI chrNW_004936470:8,349,175...8,370,099 JBrowse link
G Sec24b SEC24 homolog B, COPII coat complex component ISO (MGI:MGI:4439427|PMID:20215345) MGI PMID:20215345 MGI:MGI:4439427 NCBI chrNW_004936563:676,564...772,877 JBrowse link
G Slc9a3r1 SLC9A3 regulator 1 ISO (MGI:MGI:5578076|PMID:24920589) MGI PMID:24920589 MGI:MGI:5578076 NCBI chrNW_004936594:119,808...136,620 JBrowse link
G Sod1 superoxide dismutase 1 ISO (MGI:MGI:1344578|PMID:10466888), (MGI:MGI:3700629|PMID:10464373) MGI PMID:10464373, PMID:10466888 MGI:MGI:1344578, MGI:MGI:3700629 NCBI chrNW_004936500:10,345,154...10,352,873 JBrowse link
G Strc stereocilin ISO (MGI:MGI:5430850|PMID:21165971)
(MGI:MGI:3818235|PMID:18849963)
UniProtKB
MGI
PMID:18849963, PMID:21165971 MGI:MGI:3818235, MGI:MGI:5430850 NCBI chrNW_004936471:6,760,289...6,777,425 JBrowse link
G Tprn taperin ISO (MGI:MGI:6278501|PMID:30380417) MGI PMID:30380417 MGI:MGI:6278501 NCBI chrNW_004936669:786,569...794,713 JBrowse link
G Triobp TRIO and F-actin binding protein ISO (MGI:MGI:4881391|PMID:20510926) MGI PMID:20510926 MGI:MGI:4881391 NCBI chrNW_004936492:3,337,791...3,390,420 JBrowse link
G Whrn whirlin ISO (MGI:MGI:5796227|PMID:27117407) MGI PMID:27117407 MGI:MGI:5796227 NCBI chrNW_004936487:3,668,465...3,748,234 JBrowse link
axon choice point recognition term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Efnb3 ephrin B3 ISO (MGI:MGI:3026699|PMID:11182083) MGI PMID:11182083 MGI:MGI:3026699 NCBI chrNW_004936595:954,383...960,573 JBrowse link
G Gap43 growth associated protein 43 ISO (MGI:MGI:70834|PMID:7859286) MGI PMID:7859286 MGI:MGI:70834 NCBI chrNW_004936536:2,995,654...3,091,079 JBrowse link
axon development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Camsap2 calmodulin regulated spectrin associated protein family member 2 ISO (PMID:24908486) UniProtKB
UniProt
PMID:24908486 RGD:13441206 NCBI chrNW_004936567:3,497,304...3,590,967 JBrowse link
G Ddr1 discoidin domain receptor tyrosine kinase 1 ISO (MGI:MGI:1889152|PMID:10970885) MGI PMID:10970885 MGI:MGI:1889152 NCBI chrNW_004936837:523,227...538,799 JBrowse link
G Dynlt1 dynein light chain Tctex-type 1 ISO RGD PMID:15992542 RGD:8553295 NCBI chrNW_004936489:10,329,223...10,335,758 JBrowse link
G L1cam L1 cell adhesion molecule ISO (PMID:20621658) UniProtKB PMID:20621658 NCBI chrNW_004936809:736,385...768,822 JBrowse link
G Mapk8ip3 mitogen-activated protein kinase 8 interacting protein 3 ISO PMID:23576431
PMID:25944905
(MGI:MGI:5502974|PMID:23576431), (MGI:MGI:6162406|PMID:25944905)
UniProt
UniProtKB
PMID:23576431, PMID:25944905 MGI:MGI:5502974, MGI:MGI:6162406, RGD:13673742, RGD:13673780 NCBI chrNW_004936694:2,223,020...2,263,388 JBrowse link
G Mark2 microtubule affinity regulating kinase 2 ISO PMID:16717194 ARUK-UCL PMID:16717194 RGD:13602002 NCBI chrNW_004936599:5,226,603...5,287,677 JBrowse link
G Nefh neurofilament heavy ISO (PMID:7536898)
(MGI:MGI:2183394|PMID:9763431)
BHF-UCL PMID:7536898, PMID:9763431 MGI:MGI:2183394 NCBI chrNW_004936657:3,443,406...3,453,096 JBrowse link
G Plp1 proteolipid protein 1 ISO (MGI:MGI:5511081|PMID:24038504) MGI PMID:24038504 MGI:MGI:5511081 NCBI chrNW_004936499:10,534,953...10,553,411 JBrowse link
G Pmp22 peripheral myelin protein 22 ISO (MGI:MGI:4436804|PMID:20071523) MGI PMID:20071523 MGI:MGI:4436804 NCBI chrNW_004936724:1,747,015...1,780,298 JBrowse link
G Svbp small vasohibin binding protein ISO (PMID:31324789)
(MGI:MGI:6383353|PMID:31324789)
UniProt PMID:31324789 MGI:MGI:6383353 NCBI chrNW_004936474:24,128,633...24,135,231 JBrowse link
G Tbc1d24 TBC1 domain family member 24 ISO (MGI:MGI:6279048|PMID:30335140) MGI PMID:30335140 MGI:MGI:6279048 NCBI chrNW_004936694:1,556,717...1,582,019 JBrowse link
G Trim32 tripartite motif containing 32 ISO (MGI:MGI:3836840|PMID:19155210) MGI PMID:19155210 MGI:MGI:3836840 NCBI chrNW_004936487:5,606,690...5,619,856 JBrowse link
G Tspan2 tetraspanin 2 ISO (MGI:MGI:5511081|PMID:24038504) MGI PMID:24038504 MGI:MGI:5511081 NCBI chrNW_004936627:410,280...438,922 JBrowse link
G Vash2 vasohibin 2 ISO (PMID:31324789) UniProt PMID:31324789 NCBI chrNW_004936557:622,947...661,495 JBrowse link
G Zpr1 ZPR1 zinc finger ISO (PMID:22422766)
(MGI:MGI:3575865|PMID:15767679), (MGI:MGI:3629480|PMID:16648254), (MGI:MGI:5424069|PMID:22422766)
UniProtKB PMID:15767679, PMID:16648254, PMID:22422766 MGI:MGI:3575865, MGI:MGI:3629480, MGI:MGI:5424069 NCBI chrNW_004936542:2,058,048...2,067,468 JBrowse link
axon extension term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Auts2 activator of transcription and developmental regulator AUTS2 ISO (MGI:MGI:5908783|PMID:25533347) UniProtKB PMID:25533347 MGI:MGI:5908783 NCBI chrNW_004936543:5,146,961...6,187,634 JBrowse link
G Bdnf brain derived neurotrophic factor ISO (MGI:MGI:5515840|PMID:24035762) MGI PMID:24035762 MGI:MGI:5515840 NCBI chrNW_004936540:5,530,081...5,582,765 JBrowse link
G C9orf72 C9orf72-SMCR8 complex subunit ISO (PMID:27723745)
(MGI:MGI:5818605|PMID:27723745)
UniProtKB PMID:27723745 MGI:MGI:5818605 NCBI chrNW_004936611:2,074,655...2,101,846 JBrowse link
G Cyfip1 cytoplasmic FMR1 interacting protein 1 ISO (PMID:16260607) UniProtKB PMID:16260607 NCBI chrNW_004936471:38,264,455...38,331,995 JBrowse link
G Dclk1 doublecortin like kinase 1 ISO (MGI:MGI:3614628|PMID:16387638) MGI PMID:16387638 MGI:MGI:3614628 NCBI chrNW_004936472:29,958,716...30,287,798 JBrowse link
G Dcx doublecortin ISO (MGI:MGI:3614628|PMID:16387638) MGI PMID:16387638 MGI:MGI:3614628 NCBI chrNW_004936499:3,905,262...4,004,457 JBrowse link
G Dvl1 dishevelled segment polarity protein 1 ISO (MGI:MGI:3806438|PMID:18716223) MGI PMID:18716223 MGI:MGI:3806438 NCBI chrNW_004936737:1,797,348...1,811,043 JBrowse link
G Hsp90aa1 heat shock protein 90 alpha family class A member 1 ISO (MGI:MGI:6148478|PMID:24286867) ARUK-UCL PMID:24286867 MGI:MGI:6148478 NCBI chrNW_004936835:316,767...321,999 JBrowse link
G Hsp90ab1 heat shock protein 90 alpha family class B member 1 ISO (MGI:MGI:6148478|PMID:24286867) ARUK-UCL PMID:24286867 MGI:MGI:6148478 NCBI chrNW_004936476:15,830,459...15,836,994 JBrowse link
G Itgb1 integrin subunit beta 1 ISO (MGI:MGI:2683853|PMID:12879062) MGI PMID:12879062 MGI:MGI:2683853 NCBI chrNW_004936574:1,465,981...1,495,717 JBrowse link
G Lhx2 LIM homeobox 2 ISO (MGI:MGI:5303045|PMID:21857657) MGI PMID:21857657 MGI:MGI:5303045 NCBI chrNW_004936487:12,395,817...12,413,860 JBrowse link
G Map1b microtubule associated protein 1B ISO (MGI:MGI:3694279|PMID:16536727) MGI PMID:16536727 MGI:MGI:3694279 NCBI chrNW_004936549:4,266,371...4,371,579 JBrowse link
G Mapt microtubule associated protein tau ISO (MGI:MGI:3614337|PMID:11891784)
(MGI:MGI:3694279|PMID:16536727), (MGI:MGI:4454362|PMID:20338169)
MGI PMID:11891784, PMID:16536727, PMID:20338169 MGI:MGI:3614337, MGI:MGI:3694279, MGI:MGI:4454362 NCBI chrNW_004936541:2,381,411...2,479,984 JBrowse link
G Ndn necdin, MAGE family member ISO (MGI:MGI:3582873|PMID:15972963) MGI PMID:15972963 MGI:MGI:3582873 NCBI chrNW_004936805:849,218...850,894 JBrowse link
G Nlgn3 neuroligin 3 ISO PMID:19406211 BHF-UCL PMID:19406211 RGD:8554851 NCBI chrNW_004936762:435,729...458,261 JBrowse link
G Pou4f2 POU class 4 homeobox 2 ISO (MGI:MGI:2156641|PMID:11807038) MGI PMID:11807038 MGI:MGI:2156641 NCBI chrNW_004936535:2,705,184...2,711,785 JBrowse link
G Pou4f3 POU class 4 homeobox 3 ISO (MGI:MGI:2156641|PMID:11807038) MGI PMID:11807038 MGI:MGI:2156641 NCBI chrNW_004936504:8,348,460...8,351,246 JBrowse link
G Raph1 Ras association (RalGDS/AF-6) and pleckstrin homology domains 1 ISO (MGI:MGI:4462113|PMID:20417104) MGI PMID:20417104 MGI:MGI:4462113 NCBI chrNW_004936631:100,072...196,557 JBrowse link
G Sema5a semaphorin 5A ISO (MGI:MGI:5140622|PMID:21835343) MGI PMID:21835343 MGI:MGI:5140622 NCBI chrNW_004936643:1,352,401...1,803,553 JBrowse link
G Sema5b semaphorin 5B ISO (MGI:MGI:5140622|PMID:21835343) MGI PMID:21835343 MGI:MGI:5140622 NCBI chrNW_004936725:2,229,772...2,270,458 JBrowse link
G Sema7a semaphorin 7A (John Milton Hagen blood group) ISO (MGI:MGI:2683853|PMID:12879062) MGI PMID:12879062 MGI:MGI:2683853 NCBI chrNW_004936471:33,430,589...33,454,353 JBrowse link
G Slc9a6 solute carrier family 9 member A6 ISO (PMID:24035762) MGI PMID:24035762 NCBI chrNW_004936513:11,158,609...11,215,477 JBrowse link
G Spg11 SPG11 vesicle trafficking associated, spatacsin ISO (MGI:MGI:5585364|PMID:24794856) MGI PMID:24794856 MGI:MGI:5585364 NCBI chrNW_004936471:7,540,647...7,618,783 JBrowse link
G Ulk1 unc-51 like autophagy activating kinase 1 ISO (MGI:MGI:3706258|PMID:17389358) MGI PMID:17389358 MGI:MGI:3706258 NCBI chrNW_004936660:2,160,394...2,188,848 JBrowse link
G Ulk2 unc-51 like autophagy activating kinase 2 ISO (MGI:MGI:3706258|PMID:17389358) MGI PMID:17389358 MGI:MGI:3706258 NCBI chrNW_004936821:1,051,247...1,162,500 JBrowse link
G Usp9x ubiquitin specific peptidase 9 X-linked ISO (PMID:24607389)
(MGI:MGI:5532214|PMID:23861879)
(MGI:MGI:5574428|PMID:24607389)
UniProtKB
MGI
PMID:23861879, PMID:24607389 MGI:MGI:5532214, MGI:MGI:5574428 NCBI chrNW_004936502:7,649,808...7,732,731 JBrowse link
G Vcl vinculin ISO (MGI:MGI:5568171|PMID:24623780) MGI PMID:24623780 MGI:MGI:5568171 NCBI chrNW_004936521:5,051,077...5,163,036 JBrowse link
axon extension involved in axon guidance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nrp1 neuropilin 1 ISO (MGI:MGI:5437554|PMID:22790009) BHF-UCL PMID:22790009 MGI:MGI:5437554 NCBI chrNW_004936574:1,694,433...1,834,720 JBrowse link
G Nrp2 neuropilin 2 ISO (MGI:MGI:5437554|PMID:22790009) BHF-UCL PMID:22790009 MGI:MGI:5437554 NCBI chrNW_004936631:2,106,378...2,222,082 JBrowse link
G Sema3f semaphorin 3F ISO (MGI:MGI:5437554|PMID:22790009) BHF-UCL PMID:22790009 MGI:MGI:5437554 NCBI chrNW_004936529:1,704,523...1,733,465 JBrowse link
G Slit1 slit guidance ligand 1 ISO (PMID:16840550) UniProtKB PMID:16840550 NCBI chrNW_004936636:2,427,738...2,582,565 JBrowse link
G Slit2 slit guidance ligand 2 ISO (PMID:16840550) UniProtKB PMID:16840550 NCBI chrNW_004936477:8,111,212...8,448,567 JBrowse link
G Slit3 slit guidance ligand 3 ISO (PMID:16840550) UniProtKB PMID:16840550 NCBI chrNW_004936622:191,165...756,552 JBrowse link
G Smo smoothened, frizzled class receptor ISO RGD PMID:19447091 RGD:2324988 NCBI chrNW_004936579:5,893,064...5,917,021 JBrowse link
axon extension involved in regeneration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lamb2 laminin subunit beta 2 ISO (MGI:MGI:1101275|PMID:9396756) MGI PMID:9396756 MGI:MGI:1101275 NCBI chrNW_004936529:826,178...841,304 JBrowse link
axon guidance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ablim1 actin binding LIM protein 1 ISO (MGI:MGI:1928568|PMID:11163266) MGI PMID:11163266 MGI:MGI:1928568 NCBI chrNW_004936486:4,720,643...4,906,460 JBrowse link
G Alcam activated leukocyte cell adhesion molecule ISO (MGI:MGI:3056232|PMID:15345243) MGI PMID:15345243 MGI:MGI:3056232 NCBI chrNW_004936701:895,414...1,084,155 JBrowse link
G Ank3 ankyrin 3 ISO (MGI:MGI:3510083|PMID:15479642) MGI PMID:15479642 MGI:MGI:3510083 NCBI chrNW_004936614:2,664,594...2,976,174 JBrowse link
G Apbb1 amyloid beta precursor protein binding family B member 1 ISO (MGI:MGI:3614238|PMID:16407979) MGI PMID:16407979 MGI:MGI:3614238 NCBI chrNW_004936842:452,682...476,533 JBrowse link
G Apbb2 amyloid beta precursor protein binding family B member 2 ISO (MGI:MGI:3614238|PMID:16407979) MGI PMID:16407979 MGI:MGI:3614238 NCBI chrNW_004936482:8,166,380...8,489,489 JBrowse link
G Arhgap35 Rho GTPase activating protein 35 ISO (MGI:MGI:1933687|PMID:11283609) UniProtKB PMID:11283609 MGI:MGI:1933687 NCBI chrNW_004936664:714,036...788,584 JBrowse link
G Artn artemin ISO (MGI:MGI:2183092|PMID:12160745) MGI PMID:12160745 MGI:MGI:2183092 NCBI chrNW_004936474:25,252,510...25,254,221 JBrowse link
G Arx aristaless related homeobox ISO (MGI:MGI:3574008|PMID:15677725)
(MGI:MGI:3709215|PMID:17460091)
MGI PMID:15677725, PMID:17460091 MGI:MGI:3574008, MGI:MGI:3709215 NCBI chrNW_004936836:295,090...306,756 JBrowse link
G Atoh1 atonal bHLH transcription factor 1 ISO (MGI:MGI:3607238|PMID:16145671) MGI PMID:16145671 MGI:MGI:3607238 NCBI chrNW_004936687:1,435,977...1,437,138 JBrowse link
G B3gnt2 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2 ISO (MGI:MGI:3575344|PMID:15728829), (MGI:MGI:5528450|PMID:23006775) MGI PMID:15728829, PMID:23006775 MGI:MGI:3575344, MGI:MGI:5528450 NCBI chrNW_004936491:7,482,226...7,511,419 JBrowse link
G B4gat1 beta-1,4-glucuronyltransferase 1 ISO (MGI:MGI:5470500|PMID:23217742) MGI PMID:23217742 MGI:MGI:5470500 NCBI chrNW_004936599:3,257,329...3,259,614 JBrowse link
G Bdnf brain derived neurotrophic factor ISO (MGI:MGI:3629534|PMID:15014133) MGI PMID:15014133 MGI:MGI:3629534 NCBI chrNW_004936540:5,530,081...5,582,765 JBrowse link
G Bmp7 bone morphogenetic protein 7 ISO (MGI:MGI:2662055|PMID:12741987) MGI PMID:12741987 MGI:MGI:2662055 NCBI chrNW_004936530:71,965...143,940 JBrowse link
G Boc BOC cell adhesion associated, oncogene regulated ISO (MGI:MGI:3691957|PMID:17086203) MGI PMID:17086203 MGI:MGI:3691957 NCBI chrNW_004936536:813,984...890,766 JBrowse link
G Cdh4 cadherin 4 ISO (MGI:MGI:2679739|PMID:14586016) MGI PMID:14586016 MGI:MGI:2679739 NCBI chrNW_004936514:9,284,385...9,679,036 JBrowse link
G Cdk5r1 cyclin dependent kinase 5 regulatory subunit 1 ISO (MGI:MGI:1347398|PMID:10545161) UniProtKB PMID:10545161 MGI:MGI:1347398 NCBI chrNW_004936538:2,411,194...2,415,106 JBrowse link
G Chl1 cell adhesion molecule L1 like ISO (MGI:MGI:2389546|PMID:12391163) MGI PMID:12391163 MGI:MGI:2389546 NCBI chrNW_004936577:471,766...547,769 JBrowse link
G Cntn2 contactin 2 ISO (MGI:MGI:3801368|PMID:18550718) MGI PMID:18550718 MGI:MGI:3801368 NCBI chrNW_004936557:7,297,429...7,320,666 JBrowse link
G Crppa CDP-L-ribitol pyrophosphorylase A ISO (MGI:MGI:5470500|PMID:23217742) MGI PMID:23217742 MGI:MGI:5470500 NCBI chrNW_004936546:2,658,195...2,945,542 JBrowse link
G Csf1r colony stimulating factor 1 receptor ISO (MGI:MGI:5430247|PMID:22542597) ParkinsonsUK-UCL PMID:22542597 MGI:MGI:5430247 NCBI chrNW_004936504:4,898,947...4,927,195 JBrowse link
G Dcc DCC netrin 1 receptor ISO RGD PMID:8861902 RGD:729062 NCBI chrNW_004936497:10,122,078...11,169,900 JBrowse link
G Dlx5 distal-less homeobox 5 ISO (MGI:MGI:3722740|PMID:17804636) MGI PMID:17804636 MGI:MGI:3722740 NCBI chrNW_004936585:3,462,063...3,466,641 JBrowse link
G Draxin dorsal inhibitory axon guidance protein ISO (MGI:MGI:3832346|PMID:19150847) UniProtKB PMID:19150847 MGI:MGI:3832346 NCBI chrNW_004936474:561,822...571,817 JBrowse link
G Drgx dorsal root ganglia homeobox ISO (MGI:MGI:2670488|PMID:12917357) MGI PMID:12917357 MGI:MGI:2670488 NCBI chrNW_004936728:892,814...923,089 JBrowse link
G Dscam DS cell adhesion molecule ISO (MGI:MGI:6274971|PMID:22685302) UniProt PMID:22685302 MGI:MGI:6274971 NCBI chrNW_004936500:2,686,847...3,339,110 JBrowse link
G Dvl1 dishevelled segment polarity protein 1 ISO (MGI:MGI:3806438|PMID:18716223) MGI PMID:18716223 MGI:MGI:3806438 NCBI chrNW_004936737:1,797,348...1,811,043 JBrowse link
G Efna2 ephrin A2 ISO RGD PMID:17328773 RGD:2301727 NCBI chrNW_004936588:648,336...657,768 JBrowse link
G Efna5 ephrin A5 ISO (MGI:MGI:1261388|PMID:9614241)
(MGI:MGI:1931133|PMID:11222144)
MGI PMID:9614241, PMID:11222144 MGI:MGI:1261388, MGI:MGI:1931133 NCBI chrNW_004936531:2,217,467...2,267,265 JBrowse link
G Efnb1 ephrin B1 ISO (MGI:MGI:2153438|PMID:11731465) MGI PMID:11731465 MGI:MGI:2153438 NCBI chrNW_004936777:434,729...447,778 JBrowse link
G Efnb3 ephrin B3 ISO (MGI:MGI:2153438|PMID:11731465)
(MGI:MGI:2653388|PMID:12649481)
MGI PMID:11731465, PMID:12649481 MGI:MGI:2153438, MGI:MGI:2653388 NCBI chrNW_004936595:954,383...960,573 JBrowse link
G Enah ENAH actin regulator ISO (MGI:MGI:1331576|PMID:10069337), (MGI:MGI:3054149|PMID:15371503)
(MGI:MGI:3054149|PMID:15371503)
MGI PMID:10069337, PMID:15371503 MGI:MGI:1331576, MGI:MGI:3054149 NCBI chrNW_004936526:2,332,344...2,477,827 JBrowse link
G Epha4 EPH receptor A4 ISO (MGI:MGI:5464968|PMID:23144223)
(MGI:MGI:2653388|PMID:12649481)
MGI PMID:12649481, PMID:23144223 MGI:MGI:2653388, MGI:MGI:5464968 NCBI chrNW_004936569:3,539,269...3,670,322 JBrowse link
G Epha5 EPH receptor A5 ISO (MGI:MGI:2384261|PMID:12124402) UniProtKB PMID:12124402 MGI:MGI:2384261 NCBI chrNW_004936582:2,503,546...2,832,950 JBrowse link
G Epha8 EPH receptor A8 ISO (MGI:MGI:892883|PMID:9214628) UniProtKB PMID:9214628 MGI:MGI:892883 NCBI chrNW_004936474:7,928,700...7,981,961 JBrowse link
G Ephb1 EPH receptor B1 ISO (MGI:MGI:2149059|PMID:11532925)
(MGI:MGI:2675767|PMID:12971893)
(MGI:MGI:3716012|PMID:16701205)
(MGI:MGI:5604297|PMID:24997765)
MGI PMID:11532925, PMID:12971893, PMID:16701205, PMID:24997765 MGI:MGI:2149059, MGI:MGI:2675767, MGI:MGI:3716012, MGI:MGI:5604297 NCBI chrNW_004936529:8,006,780...8,261,923 JBrowse link
G Ephb2 EPH receptor B2 ISO (MGI:MGI:1859095|PMID:10839360), (MGI:MGI:84499|PMID:8947026)
(MGI:MGI:2149059|PMID:11532925)
UniProtKB
MGI
PMID:8947026, PMID:10839360, PMID:11532925 MGI:MGI:1859095, MGI:MGI:2149059, MGI:MGI:84499 NCBI chrNW_004936474:8,109,800...8,203,106 JBrowse link
G Ephb3 EPH receptor B3 ISO (MGI:MGI:1859095|PMID:10839360), (MGI:MGI:84499|PMID:8947026)
(MGI:MGI:2149059|PMID:11532925)
UniProtKB
MGI
PMID:8947026, PMID:10839360, PMID:11532925 MGI:MGI:1859095, MGI:MGI:2149059, MGI:MGI:84499 NCBI chrNW_004936578:5,286,580...5,297,369 JBrowse link
G Etv1 ETS variant transcription factor 1 ISO (MGI:MGI:2183841|PMID:10850491) MGI PMID:10850491 MGI:MGI:2183841 NCBI chrNW_004936546:742,586...832,972 JBrowse link
G Ext1 exostosin glycosyltransferase 1 ISO (MGI:MGI:2679928|PMID:14605369)
(MGI:MGI:2679928|PMID:14605369), (MGI:MGI:5311271|PMID:21743013)
MGI PMID:14605369, PMID:21743013 MGI:MGI:2679928, MGI:MGI:5311271 NCBI chrNW_004936470:28,303,213...28,566,470 JBrowse link
G Fezf1 FEZ family zinc finger 1 ISO (MGI:MGI:3621093|PMID:16540508) MGI PMID:16540508 MGI:MGI:3621093 NCBI chrNW_004936605:3,027,138...3,030,442 JBrowse link
G Flrt2 fibronectin leucine rich transmembrane protein 2 ISO (MGI:MGI:5486433|PMID:21673655) MGI PMID:21673655 MGI:MGI:5486433 NCBI chrNW_004936488:13,372,889...13,457,586 JBrowse link
G Flrt3 fibronectin leucine rich transmembrane protein 3 ISO (MGI:MGI:5688822|PMID:24560577)
PMID:21673655
UniProtKB
MGI
PMID:21673655, PMID:24560577 MGI:MGI:5688822, RGD:8554719 NCBI chrNW_004936485:5,532,554...5,547,430 JBrowse link
G Gap43 growth associated protein 43 ISO (MGI:MGI:1353240|PMID:10662636) MGI PMID:10662636 MGI:MGI:1353240 NCBI chrNW_004936536:2,995,654...3,091,079 JBrowse link
G Gata3 GATA binding protein 3 ISO (MGI:MGI:1928163|PMID:11135239) MGI PMID:11135239 MGI:MGI:1928163 NCBI chrNW_004936484:6,780,692...6,800,883 JBrowse link
G Gbx2 gastrulation brain homeobox 2 ISO (MGI:MGI:2179161|PMID:11967891) MGI PMID:11967891 MGI:MGI:2179161 NCBI chrNW_004936525:1,870,211...1,873,536 JBrowse link
G Gdf7 growth differentiation factor 7 ISO (MGI:MGI:2662801|PMID:12639970) MGI PMID:12639970 MGI:MGI:2662801 NCBI chrNW_004936493:10,808,714...10,812,761 JBrowse link
G Gfra3 GDNF family receptor alpha 3 ISO (MGI:MGI:1344239|PMID:10482239)
(MGI:MGI:2183092|PMID:12160745)
MGI PMID:10482239, PMID:12160745 MGI:MGI:1344239, MGI:MGI:2183092 NCBI chrNW_004936531:7,443,842...7,457,518 JBrowse link
G Gli2 GLI family zinc finger 2 ISO (MGI:MGI:1340208|PMID:10409510) MGI PMID:10409510 MGI:MGI:1340208 NCBI chrNW_004936469:49,616,552...49,788,760 JBrowse link
G Gli3 GLI family zinc finger 3 ISO (MGI:MGI:4837563|PMID:20943929)
(MGI:MGI:3628676|PMID:15065125)
MGI PMID:15065125, PMID:20943929 MGI:MGI:3628676, MGI:MGI:4837563 NCBI chrNW_004936478:17,129,922...17,403,630 JBrowse link
G Klf7 Kruppel like factor 7 ISO (MGI:MGI:3581378|PMID:15964824) MGI PMID:15964824 MGI:MGI:3581378 NCBI chrNW_004936631:3,327,555...3,412,206 JBrowse link
G L1cam L1 cell adhesion molecule ISO (PMID:24155914)
(MGI:MGI:3801368|PMID:18550718)
(MGI:MGI:2449891|PMID:12533613), (MGI:MGI:3801368|PMID:18550718)
(MGI:MGI:3804601|PMID:18650339)
UniProtKB
MGI
PMID:12533613, PMID:18550718, PMID:18650339, PMID:24155914 MGI:MGI:2449891, MGI:MGI:3801368, MGI:MGI:3804601 NCBI chrNW_004936809:736,385...768,822 JBrowse link
G Lama2 laminin subunit alpha 2 ISO (MGI:MGI:3850905|PMID:19295126) MGI PMID:19295126 MGI:MGI:3850905 NCBI chrNW_004936639:259,662...825,170 JBrowse link
G Lamb2 laminin subunit beta 2 ISO (MGI:MGI:3850905|PMID:19295126) MGI PMID:19295126 MGI:MGI:3850905 NCBI chrNW_004936529:826,178...841,304 JBrowse link
G Lgi1 leucine rich glioma inactivated 1 ISO (PMID:20463223) DFLAT PMID:20463223 NCBI chrNW_004936601:1,242,022...1,275,842 JBrowse link
G Lhx2 LIM homeobox 2 ISO (MGI:MGI:5319439|PMID:22457488)
(MGI:MGI:3714686|PMID:17493606)
CACAO
MGI
PMID:17493606, PMID:22457488 MGI:MGI:3714686, MGI:MGI:5319439 NCBI chrNW_004936487:12,395,817...12,413,860 JBrowse link
G Lmx1a LIM homeobox transcription factor 1 alpha ISO (MGI:MGI:3051929|PMID:15183721) MGI PMID:15183721 MGI:MGI:3051929 NCBI chrNW_004936481:19,863,487...19,984,299 JBrowse link
G LOC101960864 group 10 secretory phospholipase A2 ISO (PMID:15927955) MGI PMID:15927955 NCBI chrNW_004936501:2,841,209...2,857,570 JBrowse link
G LOC101971775 netrin receptor UNC5D ISO (MGI:MGI:5486433|PMID:21673655) MGI PMID:21673655 MGI:MGI:5486433 NCBI chrNW_004936973:28,551...71,710 JBrowse link
G LOC101973767 vasodilator stimulated phosphoprotein ISO (MGI:MGI:3054149|PMID:15371503) MGI PMID:15371503 MGI:MGI:3054149 NCBI chrNW_004936706:1,923,172...1,945,046 JBrowse link
G LOC101976516 olfactory receptor 10A4 ISO (MGI:MGI:5014119|PMID:21646512) MGI PMID:21646512 MGI:MGI:5014119 NCBI chrNW_004936841:254,035...255,004 JBrowse link
G Mapk8ip3 mitogen-activated protein kinase 8 interacting protein 3 ISO (MGI:MGI:3527288|PMID:15572149) MGI PMID:15572149 MGI:MGI:3527288 NCBI chrNW_004936694:2,223,020...2,263,388 JBrowse link
G Matn2 matrilin 2 ISO (MGI:MGI:3850905|PMID:19295126) MGI PMID:19295126 MGI:MGI:3850905 NCBI chrNW_004936470:44,768,048...44,905,204 JBrowse link
G Myh10 myosin heavy chain 10 ISO (MGI:MGI:3581503|PMID:15880105) MGI PMID:15880105 MGI:MGI:3581503 NCBI chrNW_004936595:1,697,283...1,832,571 JBrowse link
G Nectin1 nectin cell adhesion molecule 1 ISO RGD PMID:15328010 RGD:1599806 NCBI chrNW_004936542:4,501,081...4,602,338 JBrowse link
G Neurog2 neurogenin 2 ISO (MGI:MGI:2670323|PMID:12895419), (MGI:MGI:3056020|PMID:15328020) MGI PMID:12895419, PMID:15328020 MGI:MGI:2670323, MGI:MGI:3056020 NCBI chrNW_004936563:3,348,052...3,350,623 JBrowse link
G Nfasc neurofascin ISO (MGI:MGI:3510083|PMID:15479642) MGI PMID:15479642 MGI:MGI:3510083 NCBI chrNW_004936557:7,345,813...7,437,654 JBrowse link
G Ngfr nerve growth factor receptor ISO (MGI:MGI:2178912|PMID:11978834) MGI PMID:11978834 MGI:MGI:2178912 NCBI chrNW_004936490:12,038,500...12,057,257 JBrowse link
G Nkx2-1 NK2 homeobox 1 ISO (MGI:MGI:2157787|PMID:11830575) MGI PMID:11830575 MGI:MGI:2157787 NCBI chrNW_004936494:10,517,488...10,520,567 JBrowse link
G Nog noggin ISO (MGI:MGI:3653290|PMID:12435358) MGI PMID:12435358 MGI:MGI:3653290 NCBI chrNW_004936490:6,262,651...6,264,069 JBrowse link
G Nr4a3 nuclear receptor subfamily 4 group A member 3 ISO (MGI:MGI:3056852|PMID:15456880) MGI PMID:15456880 MGI:MGI:3056852 NCBI chrNW_004936524:8,252,321...8,290,747 JBrowse link
G Nrcam neuronal cell adhesion molecule ISO (MGI:MGI:2447374|PMID:12182881) UniProtKB PMID:12182881 MGI:MGI:2447374 NCBI chrNW_004936653:1,167,055...1,238,241 JBrowse link
G Nrp1 neuropilin 1 ISO (MGI:MGI:3578029|PMID:15814794)
(MGI:MGI:3505728|PMID:12852851)
(MGI:MGI:3525900|PMID:15604101), (MGI:MGI:3578029|PMID:15814794)
MGI PMID:12852851, PMID:15604101, PMID:15814794 MGI:MGI:3505728, MGI:MGI:3525900, MGI:MGI:3578029 NCBI chrNW_004936574:1,694,433...1,834,720 JBrowse link
G Nrp2 neuropilin 2 ISO (MGI:MGI:3578029|PMID:15814794) MGI
RGD
PMID:9288754, PMID:15814794 MGI:MGI:3578029, RGD:633436 NCBI chrNW_004936631:2,106,378...2,222,082 JBrowse link
G Ntf3 neurotrophin 3 ISO (MGI:MGI:3576404|PMID:15550985)
(MGI:MGI:80051|PMID:8861722)
MGI PMID:8861722, PMID:15550985 MGI:MGI:3576404, MGI:MGI:80051 NCBI chrNW_004936709:2,163,510...2,223,429 JBrowse link
G Ntn1 netrin 1 ISO (MGI:MGI:2181259|PMID:12051827), (MGI:MGI:2654974|PMID:12679031), (MGI:MGI:3691957|PMID:17086203)
(MGI:MGI:1861288|PMID:10908620), (MGI:MGI:3616408|PMID:16481423), (MGI:MGI:3758130|PMID:17898206)
MGI PMID:10908620, PMID:12051827, PMID:12679031, PMID:16481423, PMID:17086203, PMID:17898206 MGI:MGI:1861288, MGI:MGI:2181259, MGI:MGI:2654974, MGI:MGI:3616408, MGI:MGI:3691957, MGI:MGI:3758130 NCBI chrNW_004936595:2,146,371...2,323,346 JBrowse link
G Ntrk1 neurotrophic receptor tyrosine kinase 1 ISO RGD PMID:18344912 RGD:5684394 NCBI chrNW_004936580:6,002,168...6,021,690 JBrowse link
G Otx2 orthodenticle homeobox 2 ISO (PMID:16267555) UniProtKB PMID:16267555 NCBI chrNW_004936495:1,433,124...1,449,409 JBrowse link
G Pax6 paired box 6 ISO (MGI:MGI:2179161|PMID:11967891), (MGI:MGI:2679739|PMID:14586016) MGI PMID:11967891, PMID:14586016 MGI:MGI:2179161, MGI:MGI:2679739 NCBI chrNW_004936533:5,952,529...5,980,889 JBrowse link
G Pgrmc1 progesterone receptor membrane component 1 ISO RGD PMID:10656251 RGD:727289 NCBI chrNW_004936479:10,625,989...10,634,058 JBrowse link
G Plxna3 plexin A3 ISO (MGI:MGI:2152659|PMID:11683995) MGI PMID:11683995 MGI:MGI:2152659 NCBI chrNW_004936809:1,209,787...1,226,726 JBrowse link
G Plxna4 plexin A4 ISO (MGI:MGI:3578029|PMID:15814794) MGI PMID:15814794 MGI:MGI:3578029 NCBI chrNW_004936579:3,025,251...3,449,347 JBrowse link
G Pou4f2 POU class 4 homeobox 2 ISO (MGI:MGI:1928568|PMID:11163266) MGI PMID:11163266 MGI:MGI:1928568 NCBI chrNW_004936535:2,705,184...2,711,785 JBrowse link
G Ptpro protein tyrosine phosphatase receptor type O ISO (MGI:MGI:5306568|PMID:19800005) UniProtKB PMID:19800005 MGI:MGI:5306568 NCBI chrNW_004936587:1,967,079...2,188,651 JBrowse link
G Rac1 Rac family small GTPase 1 ISO (MGI:MGI:3709518|PMID:17409253) MGI PMID:17409253 MGI:MGI:3709518 NCBI chrNW_004936750:107,689...122,679 JBrowse link
G Reln reelin ISO (MGI:MGI:3611655|PMID:16324103) MGI PMID:16324103 MGI:MGI:3611655 NCBI chrNW_004936479:19,628,488...20,088,278 JBrowse link
G Robo1 roundabout guidance receptor 1 ISO (MGI:MGI:3041390|PMID:15091338)
(MGI:MGI:3040153|PMID:15084255)
RGD
MGI
PMID:9458045, PMID:15084255, PMID:15091338 MGI:MGI:3040153, MGI:MGI:3041390, RGD:61733 NCBI chrNW_004936505:4,329,428...4,711,310 JBrowse link
G Robo2 roundabout guidance receptor 2 ISO (MGI:MGI:3041390|PMID:15091338) RGD
MGI
PMID:10102268, PMID:15091338 MGI:MGI:3041390, RGD:68763 NCBI chrNW_004936505:5,544,011...6,747,417 JBrowse link
G Robo3 roundabout guidance receptor 3 ISO (MGI:MGI:3040153|PMID:15084255), (MGI:MGI:6316558|PMID:30843071)
(MGI:MGI:3040153|PMID:15084255), (MGI:MGI:3047174|PMID:15233918)
MGI PMID:15084255, PMID:15233918, PMID:30843071 MGI:MGI:3040153, MGI:MGI:3047174, MGI:MGI:6316558 NCBI chrNW_004936743:1,305,108...1,321,819 JBrowse link
G Runx3 RUNX family transcription factor 3 ISO (MGI:MGI:2387717|PMID:12352981) MGI PMID:12352981 MGI:MGI:2387717 NCBI chrNW_004936474:9,751,946...9,802,910 JBrowse link
G Ryk receptor like tyrosine kinase ISO (MGI:MGI:4887339|PMID:16116452)
(MGI:MGI:3625635|PMID:16723543)
UniProtKB PMID:16116452, PMID:16723543 MGI:MGI:3625635, MGI:MGI:4887339 NCBI chrNW_004936529:7,273,070...7,344,372 JBrowse link
G Scn1b sodium voltage-gated channel beta subunit 1 ISO (MGI:MGI:3778100|PMID:18354028) MGI PMID:18354028 MGI:MGI:3778100 NCBI chrNW_004936570:1,187,916...1,195,423 JBrowse link
G Sema3c semaphorin 3C ISO (MGI:MGI:5315341|PMID:17021275) UniProtKB PMID:17021275 MGI:MGI:5315341 NCBI chrNW_004936810:903,306...1,063,024 JBrowse link
G Sema3f semaphorin 3F ISO (PMID:15814794)
(MGI:MGI:3653290|PMID:12435358)
MGI PMID:12435358, PMID:15814794 MGI:MGI:3653290 NCBI chrNW_004936529:1,704,523...1,733,465 JBrowse link
G Sema4f ssemaphorin 4F ISO RGD PMID:10051670 RGD:69991 NCBI chrNW_004936556:873,669...899,400 JBrowse link
G Sema5a semaphorin 5A ISO (MGI:MGI:2447390|PMID:12506007) MGI PMID:12506007 MGI:MGI:2447390 NCBI chrNW_004936643:1,352,401...1,803,553 JBrowse link
G Sema6a semaphorin 6A ISO (MGI:MGI:3607683|PMID:16205717) UniProtKB PMID:16205717 MGI:MGI:3607683 NCBI chrNW_004936742:1,599,725...1,726,084 JBrowse link
G Sema6c semaphorin 6C ISO RGD PMID:10049528 RGD:69992 NCBI chrNW_004936580:1,331,950...1,347,327 JBrowse link
G Shh sonic hedgehog signaling molecule ISO (MGI:MGI:2654974|PMID:12679031)
(MGI:MGI:2662556|PMID:12756179), (MGI:MGI:3628676|PMID:15065125)
MGI PMID:12679031, PMID:12756179, PMID:15065125 MGI:MGI:2654974, MGI:MGI:2662556, MGI:MGI:3628676 NCBI chrNW_004936527:10,033,095...10,042,713 JBrowse link
G Slit1 slit guidance ligand 1 ISO (PMID:11748139)
(MGI:MGI:3041390|PMID:15091338)
(MGI:MGI:2181259|PMID:12051827)
(MGI:MGI:3621682|PMID:11804571)
(MGI:MGI:2678272|PMID:12954717)
UniProtKB
MGI
PMID:11748139, PMID:11804571, PMID:12051827, PMID:12954717, PMID:15091338 MGI:MGI:2181259, MGI:MGI:2678272, MGI:MGI:3041390, MGI:MGI:3621682 NCBI chrNW_004936636:2,427,738...2,582,565 JBrowse link
G Slit2 slit guidance ligand 2 ISO (MGI:MGI:2678272|PMID:12954717), (MGI:MGI:2683853|PMID:12879062)
(MGI:MGI:2679928|PMID:14605369)
(MGI:MGI:3041390|PMID:15091338)
(MGI:MGI:3621682|PMID:11804571)
(PMID:11748139)
MGI
UniProtKB
PMID:11748139, PMID:11804571, PMID:12879062, PMID:12954717, PMID:14605369, PMID:15091338 MGI:MGI:2678272, MGI:MGI:2679928, MGI:MGI:2683853, MGI:MGI:3041390, MGI:MGI:3621682 NCBI chrNW_004936477:8,111,212...8,448,567 JBrowse link
G Slit3 slit guidance ligand 3 ISO (PMID:11748139)
(MGI:MGI:2678272|PMID:12954717)
UniProtKB
MGI
PMID:11748139, PMID:12954717 MGI:MGI:2678272 NCBI chrNW_004936622:191,165...756,552 JBrowse link
G Smad4 SMAD family member 4 ISO (MGI:MGI:4940418|PMID:21300867) MGI PMID:21300867 MGI:MGI:4940418 NCBI chrNW_004936497:12,242,869...12,278,012 JBrowse link
G Tenm2 teneurin transmembrane protein 2 ISO (PMID:21724987) UniProtKB PMID:21724987 NCBI chrNW_004936622:1,101,587...1,983,816 JBrowse link
G Tgfb2 transforming growth factor beta 2 ISO (MGI:MGI:3522686|PMID:15528466) MGI PMID:15528466 MGI:MGI:3522686 NCBI chrNW_004936628:310,720...394,002 JBrowse link
G Ttc8 tetratricopeptide repeat domain 8 ISO (MGI:MGI:5014119|PMID:21646512) MGI PMID:21646512 MGI:MGI:5014119 NCBI chrNW_004936488:16,258,247...16,306,077 JBrowse link
G Tubb3 tubulin beta 3 class III ISO (MGI:MGI:4441021|PMID:20074521), (MGI:MGI:5906064|PMID:28483977)
(PMID:20074521)
UniProt
UniProtKB
PMID:20074521, PMID:28483977 MGI:MGI:4441021, MGI:MGI:5906064 NCBI chrNW_004936641:184,736...193,835 JBrowse link
G Unc5a unc-5 netrin receptor A ISO RGD PMID:9126742 RGD:634450 NCBI chrNW_004936597:1,060,496...1,122,832 JBrowse link
G Unc5b unc-5 netrin receptor B ISO PMID:21673655 RGD
MGI
PMID:9126742, PMID:21673655 RGD:634450, RGD:8554719 NCBI chrNW_004936521:7,472,788...7,547,408 JBrowse link
G Unc5c unc-5 netrin receptor C ISO (MGI:MGI:6274971|PMID:22685302)
(MGI:MGI:5464968|PMID:23144223)
UniProt
MGI
PMID:22685302, PMID:23144223 MGI:MGI:5464968, MGI:MGI:6274971 NCBI chrNW_004936687:2,600,635...2,951,407 JBrowse link
G Usp33 ubiquitin specific peptidase 33 ISO (MGI:MGI:4418596|PMID:19706539) UniProtKB PMID:19706539 MGI:MGI:4418596 NCBI chrNW_004936571:4,537,461...4,600,238 JBrowse link
G Vax1 ventral anterior homeobox 1 ISO (MGI:MGI:1350761|PMID:10601035) MGI PMID:10601035 MGI:MGI:1350761 NCBI chrNW_004936486:6,972,972...6,978,544 JBrowse link
G Wnt3a Wnt family member 3A ISO (MGI:MGI:3806438|PMID:18716223) MGI PMID:18716223 MGI:MGI:3806438 NCBI chrNW_004936864:150,742...179,205 JBrowse link
G Wnt5a Wnt family member 5A ISO (MGI:MGI:4949958|PMID:21483795) UniProtKB PMID:21483795 MGI:MGI:4949958 NCBI chrNW_004936473:6,031,627...6,052,211 JBrowse link
axon midline choice point recognition term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G App amyloid beta precursor protein ISO (MGI:MGI:69837|PMID:8001115) MGI PMID:8001115 MGI:MGI:69837 NCBI chrNW_004936640:1,549,977...1,787,436 JBrowse link
G Foxg1 forkhead box G1 ISO (MGI:MGI:3051707|PMID:15240555) MGI PMID:15240555 MGI:MGI:3051707 NCBI chrNW_004936494:3,738,419...3,740,419 JBrowse link
G Robo1 roundabout guidance receptor 1 ISO PMID:18986510
(MGI:MGI:3823169|PMID:18986510)
UniProt
UniProtKB
PMID:18986510 MGI:MGI:3823169, RGD:2314842 NCBI chrNW_004936505:4,329,428...4,711,310 JBrowse link
G Robo2 roundabout guidance receptor 2 ISO (MGI:MGI:3823169|PMID:18986510) UniProtKB PMID:18986510 MGI:MGI:3823169 NCBI chrNW_004936505:5,544,011...6,747,417 JBrowse link
G Robo3 roundabout guidance receptor 3 ISO (MGI:MGI:3823169|PMID:18986510), (MGI:MGI:3834283|PMID:18466743) UniProtKB PMID:18466743, PMID:18986510 MGI:MGI:3823169, MGI:MGI:3834283 NCBI chrNW_004936743:1,305,108...1,321,819 JBrowse link
axon regeneration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoa1 apolipoprotein A1 NOT ISO (MGI:MGI:70238|PMID:7798939) MGI PMID:7798939 MGI:MGI:70238 NCBI chrNW_004936542:2,111,055...2,112,626 JBrowse link
G Apoe apolipoprotein E NOT ISO (MGI:MGI:70238|PMID:7798939) MGI PMID:7798939 MGI:MGI:70238 NCBI chrNW_004936706:1,512,438...1,516,805 JBrowse link
G Bcl2 BCL2 apoptosis regulator ISO (MGI:MGI:85682|PMID:9009190) MGI PMID:9009190 MGI:MGI:85682 NCBI chrNW_004936497:2,209,136...2,373,580 JBrowse link
G Chl1 cell adhesion molecule L1 like ISO RGD PMID:14707551 RGD:1303346 NCBI chrNW_004936577:471,766...547,769 JBrowse link
G Cspg5 chondroitin sulfate proteoglycan 5 ISO RGD PMID:11069908 RGD:1298825 NCBI chrNW_004936596:1,235,550...1,251,100 JBrowse link
G Ctnna1 catenin alpha 1 ISO RGD PMID:12387456 RGD:632464 NCBI chrNW_004936531:7,865,907...8,036,020 JBrowse link
G Dag1 dystroglycan 1 ISO RGD PMID:16228655 RGD:11537480 NCBI chrNW_004936529:1,099,510...1,171,587 JBrowse link
G Dhfr dihydrofolate reductase ISO PMID:20424322 BHF-UCL PMID:20424322 RGD:10054082 NCBI chrNW_004936469:67,962...83,116 JBrowse link
G Folr1 folate receptor alpha ISO (MGI:MGI:4460071|PMID:20424322) BHF-UCL PMID:20424322 MGI:MGI:4460071 NCBI chrNW_004936498:1,489,916...1,497,200 JBrowse link
G Isl1 ISL LIM homeobox 1 ISO RGD PMID:10363827 RGD:2311122 NCBI chrNW_004936480:15,805,259...15,817,854 JBrowse link
G Jak2 Janus kinase 2 ISO RGD PMID:15716400 RGD:1641846 NCBI chrNW_004936503:111,722...243,627 JBrowse link
G Jam3 junctional adhesion molecule 3 ISO RGD PMID:22950044 RGD:7488944 NCBI chrNW_004936684:1,689,594...1,762,066 JBrowse link
G Jun Jun proto-oncogene, AP-1 transcription factor subunit ISO (MGI:MGI:3772001|PMID:15233917) MGI PMID:15233917 MGI:MGI:3772001 NCBI chrNW_004936522:3,034,364...3,037,632 JBrowse link
G Mag myelin associated glycoprotein ISO (MGI:MGI:4845807|PMID:20731761) MGI PMID:20731761 MGI:MGI:4845807 NCBI chrNW_004936570:989,743...1,004,820 JBrowse link
G Mapk8ip3 mitogen-activated protein kinase 8 interacting protein 3 ISO PMID:25944905 UniProt PMID:25944905 RGD:13673780 NCBI chrNW_004936694:2,223,020...2,263,388 JBrowse link
G Mtr 5-methyltetrahydrofolate-homocysteine methyltransferase ISO PMID:20424322 BHF-UCL PMID:20424322 RGD:10054082 NCBI chrNW_004936484:16,087,924...16,180,089 JBrowse link
G Nefh neurofilament heavy ISO RGD PMID:10646539 RGD:9698439 NCBI chrNW_004936657:3,443,406...3,453,096 JBrowse link
G Nefm neurofilament medium ISO RGD PMID:15206821 RGD:9698447 NCBI chrNW_004936757:1,662,905...1,668,707 JBrowse link
G Nrep neuronal regeneration related protein ISO RGD PMID:15485502 RGD:1540387 NCBI chrNW_004936531:6,077,691...6,105,517 JBrowse link
G Rxra retinoid X receptor alpha ISO RGD PMID:16782282 RGD:1643108 NCBI chrNW_004936669:2,735,111...2,763,060 JBrowse link
G Vcan versican ISO RGD PMID:12526031 RGD:632591 NCBI chrNW_004936469:2,585,142...2,688,029 JBrowse link
axon target recognition term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bdnf brain derived neurotrophic factor ISO (MGI:MGI:3511733|PMID:15464571) MGI PMID:15464571 MGI:MGI:3511733 NCBI chrNW_004936540:5,530,081...5,582,765 JBrowse link
G Foxb1 forkhead box B1 ISO (MGI:MGI:1352733|PMID:10662642), (MGI:MGI:1931655|PMID:11170346) UniProtKB PMID:10662642, PMID:11170346 MGI:MGI:1352733, MGI:MGI:1931655 NCBI chrNW_004936471:20,934,524...20,935,584 JBrowse link
G Stxbp1 syntaxin binding protein 1 ISO (MGI:MGI:3046454|PMID:15182301) MGI PMID:15182301 MGI:MGI:3046454 NCBI chrNW_004936487:15,300,758...15,367,475 JBrowse link
G Uchl1 ubiquitin C-terminal hydrolase L1 ISO (MGI:MGI:66533|PMID:8474599) MGI PMID:8474599 MGI:MGI:66533 NCBI chrNW_004936482:8,551,749...8,563,586 JBrowse link
axonal fasciculation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Amigo1 adhesion molecule with Ig like domain 1 ISO PMID:12629050 UniProt PMID:12629050 RGD:634626 NCBI chrNW_004936704:992,858...998,200 JBrowse link
G Arhgap35 Rho GTPase activating protein 35 ISO (MGI:MGI:1933687|PMID:11283609) UniProtKB PMID:11283609 MGI:MGI:1933687 NCBI chrNW_004936664:714,036...788,584 JBrowse link
G Casp3 caspase 3 ISO RGD PMID:25898930 RGD:13781947 NCBI chrNW_004936554:4,571,072...4,593,765 JBrowse link
G Casp6 caspase 6 ISO RGD PMID:25898930 RGD:13781947 NCBI chrNW_004936563:912,502...920,025 JBrowse link
G Cdk5r1 cyclin dependent kinase 5 regulatory subunit 1 ISO (MGI:MGI:1347398|PMID:10545161) UniProtKB PMID:10545161 MGI:MGI:1347398 NCBI chrNW_004936538:2,411,194...2,415,106 JBrowse link
G Celsr3 cadherin EGF LAG seven-pass G-type receptor 3 ISO (MGI:MGI:3578066|PMID:15778712) MGI PMID:15778712 MGI:MGI:3578066 NCBI chrNW_004936529:437,476...464,012 JBrowse link
G Cnr1 cannabinoid receptor 1 ISO (MGI:MGI:4837552|PMID:20962221) MGI PMID:20962221 MGI:MGI:4837552 NCBI chrNW_004936510:3,779,930...3,806,615 JBrowse link
G Cntn2 contactin 2 ISO (MGI:MGI:3804601|PMID:18650339) MGI PMID:18650339 MGI:MGI:3804601 NCBI chrNW_004936557:7,297,429...7,320,666 JBrowse link
G Crtac1 cartilage acidic protein 1 ISO (MGI:MGI:5086019|PMID:21817055) MGI PMID:21817055 MGI:MGI:5086019 NCBI chrNW_004936636:1,748,883...1,883,958 JBrowse link
G Ephb2 EPH receptor B2 ISO (MGI:MGI:84499|PMID:8947026) UniProtKB PMID:8947026 MGI:MGI:84499 NCBI chrNW_004936474:8,109,800...8,203,106 JBrowse link
G Ephb3 EPH receptor B3 ISO (MGI:MGI:84499|PMID:8947026) UniProtKB PMID:8947026 MGI:MGI:84499 NCBI chrNW_004936578:5,286,580...5,297,369 JBrowse link
G Fezf2 FEZ family zinc finger 2 ISO (MGI:MGI:3610776|PMID:16284245) MGI PMID:16284245 MGI:MGI:3610776 NCBI chrNW_004936637:4,045,224...4,051,058 JBrowse link
G L1cam L1 cell adhesion molecule ISO RGD PMID:3856258 RGD:11570517 NCBI chrNW_004936809:736,385...768,822 JBrowse link
G Ncam1 neural cell adhesion molecule 1 ISO RGD PMID:3856258 RGD:11570517 NCBI chrNW_004936612:1,262,557...1,556,281 JBrowse link
G Ncam2 neural cell adhesion molecule 2 ISO RGD PMID:15174086 RGD:1303997 NCBI chrNW_004936505:13,045,931...13,077,672 JBrowse link
G Ndn necdin, MAGE family member ISO (MGI:MGI:3582873|PMID:15972963) MGI PMID:15972963 MGI:MGI:3582873 NCBI chrNW_004936805:849,218...850,894 JBrowse link
G Nrp1 neuropilin 1 ISO (MGI:MGI:3710026|PMID:17428830) MGI PMID:17428830 MGI:MGI:3710026 NCBI chrNW_004936574:1,694,433...1,834,720 JBrowse link
G Ptprz1 protein tyrosine phosphatase receptor type Z1 ISO RGD PMID:16150606 RGD:9590115 NCBI chrNW_004936605:3,195,893...3,368,102 JBrowse link
G Rtn4 reticulon 4 ISO PMID:20573699
(MGI:MGI:4830045|PMID:20573699)
UniProt
UniProtKB
PMID:20573699 MGI:MGI:4830045, RGD:8554113 NCBI chrNW_004936491:1,407,414...1,474,031 JBrowse link
G Sema5a semaphorin 5A ISO PMID:15603739 UniProt PMID:15603739 RGD:8553809 NCBI chrNW_004936643:1,352,401...1,803,553 JBrowse link
G Tnfrsf21 TNF receptor superfamily member 21 ISO RGD PMID:25898930 RGD:13781947 NCBI chrNW_004936476:13,125,269...13,194,205 JBrowse link
axonogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actb actin beta ISO RGD PMID:12504890 RGD:728124 NCBI chrNW_004936765:667,107...670,627 JBrowse link
G Adcy1 adenylate cyclase 1 ISO (MGI:MGI:3699973|PMID:17229090) MGI PMID:17229090 MGI:MGI:3699973 NCBI chrNW_004936478:20,310,509...20,477,506 JBrowse link
G Afg3l2 AFG3 like matrix AAA peptidase subunit 2 ISO (PMID:27642048)
(MGI:MGI:3618456|PMID:2917690)
UniProtKB
MGI
PMID:2917690, PMID:27642048 MGI:MGI:3618456 NCBI chrNW_004936626:150,953...189,980 JBrowse link
G Als2 alsin Rho guanine nucleotide exchange factor ALS2 ISO RGD PMID:16802292 RGD:1599082 NCBI chrNW_004936726:940,696...1,015,771 JBrowse link
G Amigo1 adhesion molecule with Ig like domain 1 ISO RGD PMID:12629050 RGD:634626 NCBI chrNW_004936704:992,858...998,200 JBrowse link
G Ank3 ankyrin 3 ISO (MGI:MGI:5426783|PMID:11724816) BHF-UCL PMID:11724816 MGI:MGI:5426783 NCBI chrNW_004936614:2,664,594...2,976,174 JBrowse link
G Apc APC regulator of WNT signaling pathway ISO (MGI:MGI:3047466|PMID:15207235), (MGI:MGI:3806438|PMID:18716223)
(MGI:MGI:3806438|PMID:18716223)
MGI PMID:15207235, PMID:18716223 MGI:MGI:3047466, MGI:MGI:3806438 NCBI chrNW_004936531:6,899,580...7,019,016 JBrowse link
G App amyloid beta precursor protein ISO (MGI:MGI:3606204|PMID:9390996) MGI PMID:9390996 MGI:MGI:3606204 NCBI chrNW_004936640:1,549,977...1,787,436 JBrowse link
G Atl1 atlastin GTPase 1 ISO PMID:16537571 UniProt PMID:16537571 RGD:8553504 NCBI chrNW_004936495:14,984,761...15,053,188 JBrowse link
G Bcl11b BAF chromatin remodeling complex subunit BCL11B ISO (MGI:MGI:3578473|PMID:15664173) MGI PMID:15664173 MGI:MGI:3578473 NCBI chrNW_004936604:3,023,781...3,110,104 JBrowse link
G Bcl2 BCL2 apoptosis regulator ISO (MGI:MGI:85682|PMID:9009190) MGI PMID:9009190 MGI:MGI:85682 NCBI chrNW_004936497:2,209,136...2,373,580 JBrowse link
G Brsk1 BR serine/threonine kinase 1 ISO (MGI:MGI:4462353|PMID:17482548) UniProtKB PMID:17482548 MGI:MGI:4462353 NCBI chrNW_004936886:541,831...567,197 JBrowse link
G Brsk2 BR serine/threonine kinase 2 ISO (MGI:MGI:4462353|PMID:17482548) UniProtKB PMID:17482548 MGI:MGI:4462353 NCBI chrNW_004936816:307,736...335,953 JBrowse link
G Cacna1f calcium voltage-gated channel subunit alpha1 F ISO (MGI:MGI:3608035|PMID:16155113) MGI PMID:16155113 MGI:MGI:3608035 NCBI chrNW_004936721:1,078,570...1,106,153 JBrowse link
G Cck cholecystokinin ISO (MGI:MGI:3573824|PMID:15152034) MGI PMID:15152034 MGI:MGI:3573824 NCBI chrNW_004936695:2,776,705...2,782,280 JBrowse link
G Cckar cholecystokinin A receptor ISO (MGI:MGI:3573824|PMID:15152034) MGI PMID:15152034 MGI:MGI:3573824 NCBI chrNW_004936477:3,306,898...3,314,659 JBrowse link
G Cdk5 cyclin dependent kinase 5 ISO (MGI:MGI:1928548|PMID:11163260) MGI PMID:11163260 MGI:MGI:1928548 NCBI chrNW_004936527:6,478,934...6,483,848 JBrowse link
G Cnp 2',3'-cyclic nucleotide 3' phosphodiesterase ISO (MGI:MGI:3050897|PMID:12590258) MGI PMID:12590258 MGI:MGI:3050897 NCBI chrNW_004936490:16,834,570...16,841,734 JBrowse link
G Cntn2 contactin 2 ISO RGD PMID:2317872 RGD:727707 NCBI chrNW_004936557:7,297,429...7,320,666 JBrowse link
G Creb1 cAMP responsive element binding protein 1 ISO (MGI:MGI:2179186|PMID:11988169) MGI PMID:11988169 MGI:MGI:2179186 NCBI chrNW_004936631:3,721,307...3,785,346 JBrowse link
G Ctnna2 catenin alpha 2 ISO (MGI:MGI:3654578|PMID:16691566) UniProtKB PMID:16691566 MGI:MGI:3654578 NCBI chrNW_004936556:5,205,481...6,271,304 JBrowse link
G Dclk1 doublecortin like kinase 1 ISO (MGI:MGI:3614627|PMID:16387639) MGI PMID:16387639 MGI:MGI:3614627 NCBI chrNW_004936472:29,958,716...30,287,798 JBrowse link
G Dlx5 distal-less homeobox 5 ISO (MGI:MGI:2449888|PMID:12533617) MGI PMID:12533617 MGI:MGI:2449888 NCBI chrNW_004936585:3,462,063...3,466,641 JBrowse link
G Dock7 dedicator of cytokinesis 7 ISO (PMID:16982419) BHF-UCL PMID:16982419 NCBI chrNW_004936692:161,979...354,028 JBrowse link
G Drd2 dopamine receptor D2 ISO (MGI:MGI:2136539|PMID:11438590) MGI PMID:11438590 MGI:MGI:2136539 NCBI chrNW_004936612:1,094,686...1,154,149 JBrowse link
G Drgx dorsal root ganglia homeobox ISO (MGI:MGI:2137781|PMID:11498051) MGI PMID:11498051 MGI:MGI:2137781 NCBI chrNW_004936728:892,814...923,089 JBrowse link
G Dst dystonin ISO (MGI:MGI:60062|PMID:1634998) MGI PMID:1634998 MGI:MGI:60062 NCBI chrNW_004936476:4,344,673...4,772,892 JBrowse link
G Dvl1 dishevelled segment polarity protein 1 ISO (MGI:MGI:3028427|PMID:14734535) MGI PMID:14734535 MGI:MGI:3028427 NCBI chrNW_004936737:1,797,348...1,811,043 JBrowse link
G Erbb3 erb-b2 receptor tyrosine kinase 3 ISO RGD PMID:9030624 RGD:68774 NCBI chrNW_004936646:497,783...515,247 JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 ISO (MGI:MGI:3763776|PMID:17951031) MGI PMID:17951031 MGI:MGI:3763776 NCBI chrNW_004936486:10,506,680...10,606,272 JBrowse link
G Flot1 flotillin 1 ISO (MGI:MGI:3847013|PMID:19458231) MGI PMID:19458231 MGI:MGI:3847013 NCBI chrNW_004936837:387,012...401,076 JBrowse link
G Gsk3b glycogen synthase kinase 3 beta ISO (MGI:MGI:3806438|PMID:18716223) MGI PMID:18716223 MGI:MGI:3806438 NCBI chrNW_004936536:6,730,070...6,893,818 JBrowse link
G Igf1r insulin like growth factor 1 receptor ISO RGD PMID:16845384 RGD:1624300 NCBI chrNW_004936483:4,563,995...4,860,231 JBrowse link
G Kalrn kalirin RhoGEF kinase ISO RGD PMID:12177196 RGD:628431 NCBI chrNW_004936725:566,560...774,208 JBrowse link
G Klf7 Kruppel like factor 7 ISO (MGI:MGI:3581378|PMID:15964824) MGI PMID:15964824 MGI:MGI:3581378 NCBI chrNW_004936631:3,327,555...3,412,206 JBrowse link
G Llgl1 LLGL scribble cell polarity complex component 1 ISO PMID:21856246 UniProt PMID:21856246 RGD:8553614 NCBI chrNW_004936741:1,770,797...1,784,716 JBrowse link
G Map1b microtubule associated protein 1B ISO (MGI:MGI:3614337|PMID:11891784) MGI PMID:11891784 MGI:MGI:3614337 NCBI chrNW_004936549:4,266,371...4,371,579 JBrowse link
G Map2 microtubule associated protein 2 ISO (MGI:MGI:3614337|PMID:11891784), (MGI:MGI:4836447|PMID:20600662) MGI PMID:11891784, PMID:20600662 MGI:MGI:3614337, MGI:MGI:4836447 NCBI chrNW_004936845:475,406...752,600 JBrowse link
G Mapt microtubule associated protein tau ISO (MGI:MGI:3614337|PMID:11891784) MGI PMID:11891784 MGI:MGI:3614337 NCBI chrNW_004936541:2,381,411...2,479,984 JBrowse link
G Myh10 myosin heavy chain 10 ISO (MGI:MGI:1933038|PMID:11283949) MGI PMID:11283949 MGI:MGI:1933038 NCBI chrNW_004936595:1,697,283...1,832,571 JBrowse link
G Ndn necdin, MAGE family member ISO (MGI:MGI:3530392|PMID:15649943), (MGI:MGI:3582873|PMID:15972963) MGI PMID:15649943, PMID:15972963 MGI:MGI:3530392, MGI:MGI:3582873 NCBI chrNW_004936805:849,218...850,894 JBrowse link
G Nkx2-8 NK2 homeobox 8 ISO (MGI:MGI:3607408|PMID:16267219) MGI PMID:16267219 MGI:MGI:3607408 NCBI chrNW_004936494:10,580,445...10,581,798 JBrowse link
G Notch1 notch receptor 1 ISO (MGI:MGI:3526784|PMID:15598981)
(MGI:MGI:3604921|PMID:16120638)
MGI PMID:15598981, PMID:16120638 MGI:MGI:3526784, MGI:MGI:3604921 NCBI chrNW_004936669:1,292,016...1,334,061 JBrowse link
G Ntn1 netrin 1 ISO (MGI:MGI:1861288|PMID:10908620) MGI PMID:10908620 MGI:MGI:1861288 NCBI chrNW_004936595:2,146,371...2,323,346 JBrowse link
G Ntng1 netrin G1 ISO (MGI:MGI:2158548|PMID:11804778) MGI PMID:11804778 MGI:MGI:2158548 NCBI chrNW_004936731:844,718...1,184,179 JBrowse link
G Ntng2 netrin G2 ISO (MGI:MGI:2158548|PMID:11804778) MGI PMID:11804778 MGI:MGI:2158548 NCBI chrNW_004936487:18,779,470...18,838,245 JBrowse link
G Numb NUMB endocytic adaptor protein ISO (MGI:MGI:3526784|PMID:15598981) MGI PMID:15598981 MGI:MGI:3526784 NCBI chrNW_004936488:2,579,017...2,742,961 JBrowse link
G Numbl NUMB like endocytic adaptor protein ISO (MGI:MGI:3526784|PMID:15598981) MGI PMID:15598981 MGI:MGI:3526784 NCBI chrNW_004936661:2,962,741...2,984,763 JBrowse link
G Pak3 p21 (RAC1) activated kinase 3 ISO (MGI:MGI:4940954|PMID:21115725) UniProtKB PMID:21115725 MGI:MGI:4940954 NCBI chrNW_004936499:4,079,127...4,328,580 JBrowse link
G Pax6 paired box 6 ISO (MGI:MGI:3513567|PMID:15514979) MGI PMID:15514979 MGI:MGI:3513567 NCBI chrNW_004936533:5,952,529...5,980,889 JBrowse link
G Picalm phosphatidylinositol binding clathrin assembly protein ISO (MGI:MGI:4418607|PMID:18842885) BHF-UCL PMID:18842885 MGI:MGI:4418607, RGD:8554167 NCBI chrNW_004936498:13,785,638...13,885,931 JBrowse link
G Pip5k1c phosphatidylinositol-4-phosphate 5-kinase type 1 gamma ISO (MGI:MGI:3037391|PMID:14741049) MGI PMID:14741049 MGI:MGI:3037391 NCBI chrNW_004936588:2,070,873...2,088,144 JBrowse link
G Pitpna phosphatidylinositol transfer protein alpha ISO (MGI:MGI:4839451|PMID:16244667) BHF-UCL PMID:16244667 MGI:MGI:4839451 NCBI chrNW_004936538:7,663,457...7,704,484 JBrowse link
G Plppr4 phospholipid phosphatase related 4 ISO RGD PMID:12730698 RGD:1299556 NCBI chrNW_004936537:462,595...503,770 JBrowse link
G Pou4f2 POU class 4 homeobox 2 ISO (MGI:MGI:2429619|PMID:10357904) MGI PMID:10357904 MGI:MGI:2429619 NCBI chrNW_004936535:2,705,184...2,711,785 JBrowse link
G Ptpn11 protein tyrosine phosphatase non-receptor type 11 ISO (MGI:MGI:2447085|PMID:12482708) MGI PMID:12482708 MGI:MGI:2447085 NCBI chrNW_004936668:2,602,261...2,687,903 JBrowse link
G Ptprz1 protein tyrosine phosphatase receptor type Z1 ISO (MGI:MGI:1336768|PMID:10234020), (MGI:MGI:2665215|PMID:12700241) MGI PMID:10234020, PMID:12700241 MGI:MGI:1336768, MGI:MGI:2665215 NCBI chrNW_004936605:3,195,893...3,368,102 JBrowse link
G Rab10 RAB10, member RAS oncogene family ISO PMID:21856246 UniProt PMID:21856246 RGD:8553614 NCBI chrNW_004936493:6,263,870...6,351,327 JBrowse link
G Rab3a RAB3A, member RAS oncogene family ISO (MGI:MGI:3762126|PMID:11359932) MGI PMID:11359932 MGI:MGI:3762126 NCBI chrNW_004936596:2,990,367...2,995,935 JBrowse link
G Rab8a RAB8A, member RAS oncogene family ISO PMID:21856246 UniProt PMID:21856246 RGD:8553614 NCBI chrNW_004936596:4,385,788...4,403,393 JBrowse link
G Rnf165 ring finger protein 165 ISO (MGI:MGI:5499270|PMID:23610558) MGI PMID:23610558 MGI:MGI:5499270 NCBI chrNW_004936517:428,689...531,360 JBrowse link
G Rtn4r reticulon 4 receptor ISO (MGI:MGI:1933685|PMID:11201742) MGI PMID:11201742 MGI:MGI:1933685 NCBI chrNW_004936619:4,130,757...4,155,885 JBrowse link
G Ryk receptor like tyrosine kinase ISO (MGI:MGI:3510085|PMID:15454084) MGI PMID:15454084 MGI:MGI:3510085 NCBI chrNW_004936529:7,273,070...7,344,372 JBrowse link
G Sema4a semaphorin 4A ISO (MGI:MGI:5315684|PMID:20043131) UniProtKB PMID:20043131 MGI:MGI:5315684 NCBI chrNW_004936580:5,404,380...5,431,183 JBrowse link
G Shtn1 shootin 1 ISO PMID:17439943
PMID:17030985
HGNC
MGI
PMID:17030985, PMID:17439943 RGD:8554246, RGD:8554472 NCBI chrNW_004936486:6,786,037...6,867,221 JBrowse link
G Slit1 slit guidance ligand 1 ISO (MGI:MGI:3626138|PMID:12097499) MGI PMID:12097499 MGI:MGI:3626138 NCBI chrNW_004936636:2,427,738...2,582,565 JBrowse link
G Slit2 slit guidance ligand 2 ISO (MGI:MGI:3626138|PMID:12097499) MGI PMID:12097499 MGI:MGI:3626138 NCBI chrNW_004936477:8,111,212...8,448,567 JBrowse link
G Slitrk1 SLIT and NTRK like family member 1 ISO (MGI:MGI:2677606|PMID:14550773) MGI PMID:14550773 MGI:MGI:2677606 NCBI chrNW_004936696:1,447,644...1,452,612 JBrowse link
G Slitrk2 SLIT and NTRK like family member 2 ISO (MGI:MGI:2677606|PMID:14550773) MGI PMID:14550773 MGI:MGI:2677606 NCBI chrNW_004936513:2,961,842...2,969,938 JBrowse link
G Slitrk3 SLIT and NTRK like family member 3 ISO (MGI:MGI:2677606|PMID:14550773) MGI PMID:14550773 MGI:MGI:2677606 NCBI chrNW_004936707:1,315,267...1,324,793 JBrowse link
G Slitrk4 SLIT and NTRK like family member 4 ISO (MGI:MGI:2677606|PMID:14550773) MGI PMID:14550773 MGI:MGI:2677606 NCBI chrNW_004936513:4,742,743...4,750,633 JBrowse link
G Slitrk5 SLIT and NTRK like family member 5 ISO (MGI:MGI:2677606|PMID:14550773) MGI PMID:14550773 MGI:MGI:2677606 NCBI chrNW_004936472:20,698,334...20,706,161 JBrowse link
G Slitrk6 SLIT and NTRK like family member 6 ISO (MGI:MGI:2677606|PMID:14550773) MGI PMID:14550773 MGI:MGI:2677606 NCBI chrNW_004936866:412,719...419,381 JBrowse link
G Snap25 synaptosome associated protein 25 ISO RGD PMID:15478103 RGD:1581079 NCBI chrNW_004936485:9,198,744...9,279,854 JBrowse link
G Snap91 synaptosome associated protein 91 ISO PMID:18842885 BHF-UCL PMID:18842885 RGD:8554167 NCBI chrNW_004936510:7,222,200...7,345,138 JBrowse link
G Sptbn4 spectrin beta, non-erythrocytic 4 ISO (MGI:MGI:60062|PMID:1634998) MGI PMID:1634998 MGI:MGI:60062 NCBI chrNW_004936661:2,831,132...2,903,619 JBrowse link
G Stk11 serine/threonine kinase 11 ISO (MGI:MGI:4462353|PMID:17482548) RGD
UniProtKB
PMID:12114407, PMID:17482548 MGI:MGI:4462353, RGD:2291948 NCBI chrNW_004936588:579,816...601,033 JBrowse link
G Stmn1 stathmin 1 ISO (MGI:MGI:2158550|PMID:11839567) MGI PMID:11839567 MGI:MGI:2158550 NCBI chrNW_004936474:10,470,006...10,475,557 JBrowse link
G Taok2 TAO kinase 2 ISO (MGI:MGI:5462161|PMID:22683681)
(PMID:22683681)
ARUK-UCL PMID:22683681 MGI:MGI:5462161 NCBI chrNW_004936501:12,477,032...12,495,298 JBrowse link
G Tbce tubulin folding cofactor E ISO (MGI:MGI:2446402|PMID:12446740) MGI PMID:12446740 MGI:MGI:2446402 NCBI chrNW_004936484:17,048,187...17,097,414 JBrowse link
G Tnn tenascin N ISO (MGI:MGI:2664472|PMID:12812753) MGI PMID:12812753 MGI:MGI:2664472 NCBI chrNW_004936481:13,085,325...13,149,840 JBrowse link
G Top2b DNA topoisomerase II beta ISO (MGI:MGI:2178151|PMID:10615047) MGI PMID:10615047 MGI:MGI:2178151 NCBI chrNW_004936473:17,146,576...17,189,589 JBrowse link
G Trim46 tripartite motif containing 46 ISO (MGI:MGI:5708763|PMID:26671463) MGI PMID:26671463 MGI:MGI:5708763 NCBI chrNW_004936580:4,678,855...4,690,222 JBrowse link
G Uchl1 ubiquitin C-terminal hydrolase L1 ISO (MGI:MGI:50250|PMID:1630580) MGI PMID:1630580 MGI:MGI:50250 NCBI chrNW_004936482:8,551,749...8,563,586 JBrowse link
G Ulk1 unc-51 like autophagy activating kinase 1 ISO (MGI:MGI:3037621|PMID:15014045) MGI PMID:15014045 MGI:MGI:3037621 NCBI chrNW_004936660:2,160,394...2,188,848 JBrowse link
G Vax2 ventral anterior homeobox 2 ISO (MGI:MGI:2157790|PMID:11830579) MGI PMID:11830579 MGI:MGI:2157790 NCBI chrNW_004936491:15,079,446...15,110,238 JBrowse link
G Wnt3a Wnt family member 3A ISO (MGI:MGI:3510085|PMID:15454084) MGI PMID:15454084 MGI:MGI:3510085 NCBI chrNW_004936864:150,742...179,205 JBrowse link
G Wnt5a Wnt family member 5A ISO (MGI:MGI:5707582|PMID:23517308) ParkinsonsUK-UCL PMID:23517308 MGI:MGI:5707582 NCBI chrNW_004936473:6,031,627...6,052,211 JBrowse link
G Zdhhc17 zinc finger DHHC-type palmitoyltransferase 17 ISO (MGI:MGI:5775247|PMID:26232532) UniProt PMID:26232532 MGI:MGI:5775247 NCBI chrNW_004936568:4,959,796...5,052,254 JBrowse link
axonogenesis involved in innervation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Col25a1 collagen type XXV alpha 1 chain ISO (MGI:MGI:5553181|PMID:24453327) MGI PMID:24453327 MGI:MGI:5553181 NCBI chrNW_004936563:105,551...557,682 JBrowse link
G Fgfr3 fibroblast growth factor receptor 3 ISO (MGI:MGI:3714212|PMID:17557302) MGI PMID:17557302 MGI:MGI:3714212 NCBI chrNW_004936477:21,591,772...21,606,289 JBrowse link
G Itga4 integrin subunit alpha 4 ISO RGD PMID:16181811 RGD:13593536 NCBI chrNW_004936509:10,215,283...10,293,653 JBrowse link
G Nptx1 neuronal pentraxin 1 ISO (MGI:MGI:3626127|PMID:16763034) MGI PMID:16763034 MGI:MGI:3626127 NCBI chrNW_004936594:4,373,500...4,384,394 JBrowse link
G Nrp1 neuropilin 1 ISO (MGI:MGI:5437554|PMID:22790009) BHF-UCL PMID:22790009 MGI:MGI:5437554 NCBI chrNW_004936574:1,694,433...1,834,720 JBrowse link
G Ntrk1 neurotrophic receptor tyrosine kinase 1 ISO (MGI:MGI:83009|PMID:8815902) UniProtKB PMID:8815902 MGI:MGI:83009 NCBI chrNW_004936580:6,002,168...6,021,690 JBrowse link
basal dendrite arborization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nrp1 neuropilin 1 ISO (MGI:MGI:5462161|PMID:22683681) ARUK-UCL PMID:22683681 MGI:MGI:5462161 NCBI chrNW_004936574:1,694,433...1,834,720 JBrowse link
G Taok2 TAO kinase 2 ISO (MGI:MGI:5462161|PMID:22683681) ARUK-UCL PMID:22683681 MGI:MGI:5462161, RGD:13461760 NCBI chrNW_004936501:12,477,032...12,495,298 JBrowse link
basal dendrite development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nrp1 neuropilin 1 ISO (MGI:MGI:5462161|PMID:22683681) ARUK-UCL PMID:22683681 MGI:MGI:5462161 NCBI chrNW_004936574:1,694,433...1,834,720 JBrowse link
basal dendrite morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Taok2 TAO kinase 2 ISO PMID:22683681
(MGI:MGI:5462161|PMID:22683681)
ARUK-UCL PMID:22683681 MGI:MGI:5462161, RGD:13461760 NCBI chrNW_004936501:12,477,032...12,495,298 JBrowse link
branchiomotor neuron axon guidance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mycbp2 MYC binding protein 2 ISO (MGI:MGI:3776727|PMID:18031680) MGI PMID:18031680 MGI:MGI:3776727 NCBI chrNW_004936511:3,977,950...4,248,959 JBrowse link
G Nrp1 neuropilin 1 ISO (MGI:MGI:3822054|PMID:18804103) ParkinsonsUK-UCL PMID:18804103 MGI:MGI:3822054 NCBI chrNW_004936574:1,694,433...1,834,720 JBrowse link
G Plxna3 plexin A3 ISO (MGI:MGI:3822054|PMID:18804103) ParkinsonsUK-UCL PMID:18804103 MGI:MGI:3822054 NCBI chrNW_004936809:1,209,787...1,226,726 JBrowse link
G Plxna4 plexin A4 ISO (MGI:MGI:3822054|PMID:18804103) ParkinsonsUK-UCL PMID:18804103 MGI:MGI:3822054 NCBI chrNW_004936579:3,025,251...3,449,347 JBrowse link
G Sema3f semaphorin 3F ISO (MGI:MGI:3822054|PMID:18804103) ParkinsonsUK-UCL PMID:18804103 MGI:MGI:3822054 NCBI chrNW_004936529:1,704,523...1,733,465 JBrowse link
Cajal-Retzius cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Psen1 presenilin 1 ISO (MGI:MGI:3603707|PMID:15548218) MGI PMID:15548218 MGI:MGI:3603707 NCBI chrNW_004936488:2,464,623...2,528,807 JBrowse link
camera-type eye photoreceptor cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Prom1 prominin 1 ISO (MGI:MGI:3838023|PMID:19228982)
(PMID:18654668)
UniProtKB
BHF-UCL
PMID:18654668, PMID:19228982 MGI:MGI:3838023 NCBI chrNW_004936477:11,878,261...12,017,228 JBrowse link
G Rom1 retinal outer segment membrane protein 1 ISO (MGI:MGI:4437581|PMID:20300562) MGI PMID:20300562 MGI:MGI:4437581 NCBI chrNW_004936581:642,322...644,286 JBrowse link
G Sdk2 sidekick cell adhesion molecule 2 ISO (MGI:MGI:5693671|PMID:26287463) UniProtKB PMID:26287463 MGI:MGI:5693671 NCBI chrNW_004936655:682,132...928,886 JBrowse link
G Slc4a7 solute carrier family 4 member 7 ISO (MGI:MGI:2680888|PMID:12808454) MGI PMID:12808454 MGI:MGI:2680888 NCBI chrNW_004936473:18,550,489...18,645,470 JBrowse link
G Ttc8 tetratricopeptide repeat domain 8 ISO (MGI:MGI:5014119|PMID:21646512) MGI PMID:21646512 MGI:MGI:5014119 NCBI chrNW_004936488:16,258,247...16,306,077 JBrowse link
camera-type eye photoreceptor cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ihh Indian hedgehog signaling molecule ISO (MGI:MGI:3807419|PMID:18582859) MGI PMID:18582859 MGI:MGI:3807419 NCBI chrNW_004936569:1,474,693...1,480,562 JBrowse link
canonical Wnt signaling pathway involved in midbrain dopaminergic neuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Wnt1 Wnt family member 1 ISO (MGI:MGI:5705221|PMID:19951692) ParkinsonsUK-UCL PMID:19951692 MGI:MGI:5705221 NCBI chrNW_004936512:6,781,001...6,785,358 JBrowse link
G Wnt2 Wnt family member 2 ISO (PMID:20018874) ParkinsonsUK-UCL PMID:20018874 NCBI chrNW_004936589:1,825,209...1,866,898 JBrowse link
cardiac neuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Vcam1 vascular cell adhesion molecule 1 ISO RGD PMID:12486170 RGD:628409 NCBI chrNW_004936748:785,491...802,791 JBrowse link
cell morphogenesis involved in neuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxg1 forkhead box G1 ISO (MGI:MGI:3654570|PMID:16691564) MGI PMID:16691564 MGI:MGI:3654570 NCBI chrNW_004936494:3,738,419...3,740,419 JBrowse link
G Hes1 hes family bHLH transcription factor 1 ISO (MGI:MGI:2149154|PMID:11500373) MGI PMID:11500373 MGI:MGI:2149154 NCBI chrNW_004936711:640,002...642,580 JBrowse link
G Hexa hexosaminidase subunit alpha ISO (MGI:MGI:3033296|PMID:14972652) MGI PMID:14972652 MGI:MGI:3033296 NCBI chrNW_004936471:31,712,485...31,738,273 JBrowse link
G Id2 inhibitor of DNA binding 2 ISO (MGI:MGI:5487734|PMID:23264561) MGI PMID:23264561 MGI:MGI:5487734 NCBI chrNW_004936532:5,236,175...5,238,689 JBrowse link
G LOC101977674 oligophrenin-1 ISO (PMID:27160703) ARUK-UCL PMID:27160703 NCBI chrNW_004936635:6,966...243,209 JBrowse link
G Mef2c myocyte enhancer factor 2C ISO (MGI:MGI:3804505|PMID:18599437) Alzheimers_University_of_Toronto PMID:18599437 MGI:MGI:3804505 NCBI chrNW_004936469:7,060,480...7,225,497 JBrowse link
G Mnx1 motor neuron and pancreas homeobox 1 ISO (MGI:MGI:1344237|PMID:10482234) MGI PMID:10482234 MGI:MGI:1344237 NCBI chrNW_004936797:618,696...623,219 JBrowse link
G Mycbp2 MYC binding protein 2 ISO (MGI:MGI:3776727|PMID:18031680) MGI PMID:18031680 MGI:MGI:3776727 NCBI chrNW_004936511:3,977,950...4,248,959 JBrowse link
G Rb1 RB transcriptional corepressor 1 ISO (MGI:MGI:3664376|PMID:7958874) MGI PMID:7958874 MGI:MGI:3664376 NCBI chrNW_004936565:1,596,227...1,746,706 JBrowse link
G Slc1a3 solute carrier family 1 member 3 ISO (MGI:MGI:1202024|PMID:9753165) MGI PMID:9753165 MGI:MGI:1202024 NCBI chrNW_004936518:5,216,343...5,291,107 JBrowse link
G Spr sepiapterin reductase ISO (MGI:MGI:3722569|PMID:16532389) MGI PMID:16532389 MGI:MGI:3722569 NCBI chrNW_004936491:16,693,940...16,699,040 JBrowse link
G Tbcd tubulin folding cofactor D ISO (PMID:27666374) UniProtKB PMID:27666374 NCBI chrNW_004936923:239,029...366,503 JBrowse link
G Unk unk zinc finger ISO (MGI:MGI:5630004|PMID:25737280)
(PMID:25737280)
MGI
UniProtKB
PMID:25737280 MGI:MGI:5630004 NCBI chrNW_004936594:967,386...1,005,085 JBrowse link
central nervous system interneuron axonogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tctn1 tectonic family member 1 ISO (MGI:MGI:3610767|PMID:16357211) MGI PMID:16357211 MGI:MGI:3610767 NCBI chrNW_004936558:3,552,909...3,581,212 JBrowse link
central nervous system neuron axonogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arhgap35 Rho GTPase activating protein 35 ISO (MGI:MGI:1933687|PMID:11283609) UniProtKB PMID:11283609 MGI:MGI:1933687 NCBI chrNW_004936664:714,036...788,584 JBrowse link
G Arhgef28 Rho guanine nucleotide exchange factor 28 ISO (MGI:MGI:3056242|PMID:15378065) MGI PMID:15378065 MGI:MGI:3056242 NCBI chrNW_004936549:2,685,953...2,977,754 JBrowse link
G Atg7 autophagy related 7 ISO (MGI:MGI:4829568|PMID:20577052) MGI PMID:20577052 MGI:MGI:4829568 NCBI chrNW_004936602:1,938,720...2,179,239 JBrowse link
G B4galt5 beta-1,4-galactosyltransferase 5 ISO (MGI:MGI:6196231|PMID:30114188) UniProt PMID:30114188 MGI:MGI:6196231 NCBI chrNW_004936514:4,719,198...4,736,638 JBrowse link
G B4galt6 beta-1,4-galactosyltransferase 6 ISO (MGI:MGI:6196231|PMID:30114188) UniProt PMID:30114188 MGI:MGI:6196231 NCBI chrNW_004936682:1,535,617...1,590,723 JBrowse link
G Chrnb2 cholinergic receptor nicotinic beta 2 subunit ISO (MGI:MGI:3721829|PMID:12097474) MGI PMID:12097474 MGI:MGI:3721829 NCBI chrNW_004936580:4,165,255...4,179,285 JBrowse link
G Hsp90aa1 heat shock protein 90 alpha family class A member 1 ISO (MGI:MGI:6148478|PMID:24286867) ARUK-UCL PMID:24286867 MGI:MGI:6148478 NCBI chrNW_004936835:316,767...321,999 JBrowse link
G Hsp90ab1 heat shock protein 90 alpha family class B member 1 ISO (MGI:MGI:6148478|PMID:24286867) ARUK-UCL PMID:24286867 MGI:MGI:6148478 NCBI chrNW_004936476:15,830,459...15,836,994 JBrowse link
G Ndel1 nudE neurodevelopment protein 1 like 1 ISO (MGI:MGI:3047464|PMID:15208636) MGI PMID:15208636 MGI:MGI:3047464 NCBI chrNW_004936595:1,656,956...1,692,775 JBrowse link
G Prkca protein kinase C alpha ISO RGD PMID:18062921 RGD:2293300 NCBI chrNW_004936541:6,231,604...6,488,201 JBrowse link
G Pten phosphatase and tensin homolog ISO (MGI:MGI:3629385|PMID:16675393) BHF-UCL PMID:16675393 MGI:MGI:3629385 NCBI chrNW_004936735:1,252,414...1,338,318 JBrowse link
G Ptk2 protein tyrosine kinase 2 ISO (MGI:MGI:3056242|PMID:15378065) MGI PMID:15378065 MGI:MGI:3056242 NCBI chrNW_004936470:10,379,855...10,578,531 JBrowse link
central nervous system neuron development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ascl1 achaete-scute family bHLH transcription factor 1 ISO (MGI:MGI:3639051|PMID:16469766)
(MGI:MGI:3615742|PMID:15169849)
MGI PMID:15169849, PMID:16469766 MGI:MGI:3615742, MGI:MGI:3639051 NCBI chrNW_004936492:11,315,929...11,317,166 JBrowse link
G Atp7a ATPase copper transporting alpha ISO (MGI:MGI:65000|PMID:8174230) MGI PMID:8174230 MGI:MGI:65000 NCBI chrNW_004936683:2,874,022...2,936,214 JBrowse link
G Btg2 BTG anti-proliferation factor 2 ISO (MGI:MGI:4418391|PMID:20020054) MGI PMID:20020054 MGI:MGI:4418391 NCBI chrNW_004936567:1,310,525...1,314,469 JBrowse link
G Cdk5 cyclin dependent kinase 5 ISO (MGI:MGI:1889058|PMID:8855328) MGI PMID:8855328 MGI:MGI:1889058 NCBI chrNW_004936527:6,478,934...6,483,848 JBrowse link
G Fgf8 fibroblast growth factor 8 ISO development of dopaminergic neurons in the midbrain and serotonergic neurons in the rostral hindbrain RGD PMID:9630220 RGD:2289424 NCBI chrNW_004936600:4,004,847...4,010,626 JBrowse link
G Fgfr1 fibroblast growth factor receptor 1 ISO RGD PMID:17314281 RGD:2325182 NCBI chrNW_004936710:1,760,365...1,815,269 JBrowse link
G Foxg1 forkhead box G1 ISO (MGI:MGI:3639840|PMID:16680166) MGI PMID:16680166 MGI:MGI:3639840 NCBI chrNW_004936494:3,738,419...3,740,419 JBrowse link
G Gabrb1 gamma-aminobutyric acid type A receptor subunit beta1 ISO RGD PMID:15158077 RGD:6480239 NCBI chrNW_004936482:13,219,962...13,593,868 JBrowse link
G Gata2 GATA binding protein 2 ISO (MGI:MGI:1339230|PMID:10357893) MGI PMID:10357893 MGI:MGI:1339230 NCBI chrNW_004936798:406,258...414,785 JBrowse link
G Gba2 glucosylceramidase beta 2 ISO (PMID:23332916) UniProtKB PMID:23332916 NCBI chrNW_004936524:3,730,833...3,742,526 JBrowse link
G Hprt1 hypoxanthine phosphoribosyltransferase 1 ISO (MGI:MGI:1321418|PMID:9886073) MGI PMID:9886073 MGI:MGI:1321418 NCBI chrNW_004936691:650,753...694,362 JBrowse link
G Lep leptin ISO (MGI:MGI:1351081|PMID:10592285) MGI PMID:10592285 MGI:MGI:1351081 NCBI chrNW_004936479:15,394,966...15,411,334 JBrowse link
G Lingo1 leucine rich repeat and Ig domain containing 1 ISO (MGI:MGI:3722980|PMID:17726113) MGI PMID:17726113 MGI:MGI:3722980 NCBI chrNW_004936471:34,657,073...34,729,662 JBrowse link
G Lmx1b LIM homeobox transcription factor 1 beta ISO (MGI:MGI:3694852|PMID:17151281) MGI PMID:17151281 MGI:MGI:3694852 NCBI chrNW_004936487:14,513,303...14,587,771 JBrowse link
G LOC101958440 cytosolic carboxypeptidase 6 ISO (MGI:MGI:6269036|PMID:30420556) MGI PMID:30420556 MGI:MGI:6269036 NCBI chrNW_004936474:29,407,786...29,533,981 JBrowse link
G Map2 microtubule associated protein 2 ISO (PMID:20846339) DFLAT PMID:20846339 NCBI chrNW_004936845:475,406...752,600 JBrowse link
G Neurog2 neurogenin 2 ISO (MGI:MGI:3612224|PMID:16410412) MGI PMID:16410412 MGI:MGI:3612224 NCBI chrNW_004936563:3,348,052...3,350,623 JBrowse link
G Npy neuropeptide Y ISO (PMID:20846339) DFLAT PMID:20846339 NCBI chrNW_004936478:1,289,437...1,296,819 JBrowse link
G Ntrk2 neurotrophic receptor tyrosine kinase 2 ISO (MGI:MGI:1343962|PMID:8402890) UniProtKB PMID:8402890 MGI:MGI:1343962 NCBI chrNW_004936680:267,850...621,467 JBrowse link
G Ttc36 tetratricopeptide repeat domain 36 ISO (MGI:MGI:6362140|PMID:31537781) MGI PMID:31537781 MGI:MGI:6362140 NCBI chrNW_004936542:3,567,469...3,571,393 JBrowse link
central nervous system neuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl11b BAF chromatin remodeling complex subunit BCL11B ISO (MGI:MGI:3790890|PMID:18215621) MGI PMID:18215621 MGI:MGI:3790890 NCBI chrNW_004936604:3,023,781...3,110,104 JBrowse link
G Cacna1a calcium voltage-gated channel subunit alpha1 A ISO (MGI:MGI:55090|PMID:6945603) MGI PMID:6945603 MGI:MGI:55090 NCBI chrNW_004936659:2,201,606...2,269,625 JBrowse link
G Hoxa1 homeobox A1 ISO (MGI:MGI:1306866|PMID:9806922) MGI PMID:9806922 MGI:MGI:1306866 NCBI chrNW_004936478:3,721,662...3,724,471 JBrowse link
G Lmx1a LIM homeobox transcription factor 1 alpha ISO (MGI:MGI:3721195|PMID:17670789) MGI PMID:17670789 MGI:MGI:3721195 NCBI chrNW_004936481:19,863,487...19,984,299 JBrowse link
G Met MET proto-oncogene, receptor tyrosine kinase ISO RGD PMID:18262389 RGD:2317458 NCBI chrNW_004936589:2,280,803...2,390,179 JBrowse link
G Mnx1 motor neuron and pancreas homeobox 1 ISO (MGI:MGI:1344237|PMID:10482234) MGI PMID:10482234 MGI:MGI:1344237 NCBI chrNW_004936797:618,696...623,219 JBrowse link
G Nkx6-1 NK6 homeobox 1 ISO (MGI:MGI:4360136|PMID:19592574) MGI PMID:19592574 MGI:MGI:4360136 NCBI chrNW_004936738:318,020...322,869 JBrowse link
G Nr4a2 nuclear receptor subfamily 4 group A member 2 ISO (MGI:MGI:1928583|PMID:11113533) MGI PMID:11113533 MGI:MGI:1928583 NCBI chrNW_004936469:21,912,118...21,920,486 JBrowse link
G Pou4f1 POU class 4 homeobox 1 ISO (MGI:MGI:83320|PMID:8876243)
(MGI:MGI:84546|PMID:8955272)
MGI PMID:8876243, PMID:8955272 MGI:MGI:83320, MGI:MGI:84546 NCBI chrNW_004936511:2,857,017...2,859,705 JBrowse link
G Smo smoothened, frizzled class receptor ISO (MGI:MGI:3624182|PMID:16571630) MGI PMID:16571630 MGI:MGI:3624182 NCBI chrNW_004936579:5,893,064...5,917,021 JBrowse link
G Sox5 SRY-box transcription factor 5 ISO (MGI:MGI:3790890|PMID:18215621) MGI PMID:18215621 MGI:MGI:3790890 NCBI chrNW_004936548:3,213,305...3,599,876 JBrowse link
G Spock1 SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1 ISO (PMID:10640720) UniProtKB PMID:10640720 NCBI chrNW_004936597:4,000,433...4,493,920 JBrowse link
G Tulp3 TUB like protein 3 ISO (MGI:MGI:3841503|PMID:19286674) MGI PMID:19286674 MGI:MGI:3841503 NCBI chrNW_004936606:3,209,170...3,278,809 JBrowse link
central nervous system projection neuron axonogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bhlhe22 basic helix-loop-helix family member e22 ISO (MGI:MGI:5315201|PMID:22284184) MGI PMID:22284184 MGI:MGI:5315201 NCBI chrNW_004936496:9,085,894...9,087,623 JBrowse link
G Chrnb2 cholinergic receptor nicotinic beta 2 subunit ISO (MGI:MGI:3527366|PMID:15608630)
(MGI:MGI:2181503|PMID:11344259), (MGI:MGI:2683795|PMID:14687550)
MGI PMID:11344259, PMID:14687550, PMID:15608630 MGI:MGI:2181503, MGI:MGI:2683795, MGI:MGI:3527366 NCBI chrNW_004936580:4,165,255...4,179,285 JBrowse link
G Dclk1 doublecortin like kinase 1 ISO (MGI:MGI:3614628|PMID:16387638) MGI PMID:16387638 MGI:MGI:3614628 NCBI chrNW_004936472:29,958,716...30,287,798 JBrowse link
G Dcx doublecortin ISO (MGI:MGI:3614628|PMID:16387638) MGI PMID:16387638 MGI:MGI:3614628 NCBI chrNW_004936499:3,905,262...4,004,457 JBrowse link
G Ephb1 EPH receptor B1 ISO (MGI:MGI:2675767|PMID:12971893) MGI PMID:12971893 MGI:MGI:2675767 NCBI chrNW_004936529:8,006,780...8,261,923 JBrowse link
G Ephb2 EPH receptor B2 ISO (MGI:MGI:2675767|PMID:12971893) MGI PMID:12971893 MGI:MGI:2675767 NCBI chrNW_004936474:8,109,800...8,203,106 JBrowse link
G Ephb3 EPH receptor B3 ISO (MGI:MGI:2675767|PMID:12971893) MGI PMID:12971893 MGI:MGI:2675767 NCBI chrNW_004936578:5,286,580...5,297,369 JBrowse link
G Mycbp2 MYC binding protein 2 ISO (MGI:MGI:3759703|PMID:17901218)
(MGI:MGI:3776727|PMID:18031680)
UniProtKB
MGI
PMID:17901218, PMID:18031680 MGI:MGI:3759703, MGI:MGI:3776727 NCBI chrNW_004936511:3,977,950...4,248,959 JBrowse link
G Nr4a2 nuclear receptor subfamily 4 group A member 2 ISO (MGI:MGI:1350702|PMID:10585298) MGI PMID:10585298 MGI:MGI:1350702 NCBI chrNW_004936469:21,912,118...21,920,486 JBrowse link
G Prdm8 PR/SET domain 8 ISO (MGI:MGI:5315201|PMID:22284184) MGI PMID:22284184 MGI:MGI:5315201 NCBI chrNW_004936749:1,819,491...1,827,440 JBrowse link
G Sptbn4 spectrin beta, non-erythrocytic 4 ISO (MGI:MGI:3708238|PMID:17197442) MGI PMID:17197442 MGI:MGI:3708238 NCBI chrNW_004936661:2,831,132...2,903,619 JBrowse link
cerebellar granule cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp2b2 ATPase plasma membrane Ca2+ transporting 2 ISO (MGI:MGI:1275896|PMID:9668038) MGI PMID:9668038 MGI:MGI:1275896 NCBI chrNW_004936602:2,744,757...3,011,051 JBrowse link
G Cbln1 cerebellin 1 precursor ISO (MGI:MGI:4839424|PMID:20537373) BHF-UCL PMID:20537373 MGI:MGI:4839424 NCBI chrNW_004936475:2,493,280...2,496,738 JBrowse link
G Grid2 glutamate ionotropic receptor delta type subunit 2 ISO (MGI:MGI:4839424|PMID:20537373) BHF-UCL PMID:20537373 MGI:MGI:4839424 NCBI chrNW_004936687:20,126...1,421,075 JBrowse link
G Kndc1 kinase non-catalytic C-lobe domain containing 1 ISO (MGI:MGI:3769586|PMID:17984326) MGI PMID:17984326 MGI:MGI:3769586 NCBI chrNW_004936486:19,287,468...19,341,127 JBrowse link
G LOC101977674 oligophrenin-1 ISO (PMID:27160703) ARUK-UCL PMID:27160703 NCBI chrNW_004936635:6,966...243,209 JBrowse link
G Mtpn myotrophin ISO RGD PMID:8144589 RGD:632797 NCBI chrNW_004936592:644,618...679,615 JBrowse link
G Nfix nuclear factor I X ISO (MGI:MGI:5436217|PMID:21800304) MGI PMID:21800304 MGI:MGI:5436217 NCBI chrNW_004936659:2,065,410...2,136,898 JBrowse link
G Nrxn1 neurexin 1 ISO (MGI:MGI:4839424|PMID:20537373) BHF-UCL PMID:20537373 MGI:MGI:4839424 NCBI chrNW_004936508:1,889,640...2,954,039 JBrowse link
G Prox1 prospero homeobox 1 ISO (MGI:MGI:4849596|PMID:20808958) BHF-UCL PMID:20808958 MGI:MGI:4849596 NCBI chrNW_004936628:4,185,712...4,240,680 JBrowse link
G Top2a DNA topoisomerase II alpha ISO RGD PMID:11170002 RGD:8693630 NCBI chrNW_004936490:15,441,463...15,465,692 JBrowse link
G Ulk1 unc-51 like autophagy activating kinase 1 ISO (MGI:MGI:1351063|PMID:10624947) MGI PMID:10624947 MGI:MGI:1351063 NCBI chrNW_004936660:2,160,394...2,188,848 JBrowse link
G Wnt7a Wnt family member 7A ISO (MGI:MGI:1195230|PMID:9405095) MGI PMID:9405095 MGI:MGI:1195230 NCBI chrNW_004936898:45,903...70,313 JBrowse link
cerebellar neuron development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Crk CRK proto-oncogene, adaptor protein ISO (MGI:MGI:3822695|PMID:19074029) MGI PMID:19074029 MGI:MGI:3822695 NCBI chrNW_004936538:7,581,453...7,609,543 JBrowse link
G Crkl CRK like proto-oncogene, adaptor protein ISO (MGI:MGI:3822695|PMID:19074029) MGI PMID:19074029 MGI:MGI:3822695 NCBI chrNW_004936619:2,447,686...2,479,589 JBrowse link
G Samd4b sterile alpha motif domain containing 4B ISO (MGI:MGI:5703669|PMID:26609159) MGI PMID:26609159 MGI:MGI:5703669 NCBI chrNW_004936661:2,208,852...2,234,660 JBrowse link
cerebellar Purkinje cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp2b2 ATPase plasma membrane Ca2+ transporting 2 ISO (MGI:MGI:1275896|PMID:9668038) MGI PMID:9668038 MGI:MGI:1275896 NCBI chrNW_004936602:2,744,757...3,011,051 JBrowse link
G Atp7a ATPase copper transporting alpha ISO (MGI:MGI:71790|PMID:2473662) MGI PMID:2473662 MGI:MGI:71790 NCBI chrNW_004936683:2,874,022...2,936,214 JBrowse link
G Atxn2 ataxin 2 ISO (MGI:MGI:3510013|PMID:10973246) MGI PMID:10973246 MGI:MGI:3510013 NCBI chrNW_004936558:4,127,477...4,188,307 JBrowse link
G Cacna1a calcium voltage-gated channel subunit alpha1 A ISO (MGI:MGI:1347769|PMID:10630211)
(MGI:MGI:68980|PMID:7834360)
(MGI:MGI:62667|PMID:1306163)
MGI PMID:1306163, PMID:7834360, PMID:10630211 MGI:MGI:1347769, MGI:MGI:62667, MGI:MGI:68980 NCBI chrNW_004936659:2,201,606...2,269,625 JBrowse link
G Cend1 cell cycle exit and neuronal differentiation 1 ISO (MGI:MGI:4830814|PMID:20153830) MGI PMID:20153830 MGI:MGI:4830814 NCBI chrNW_004936888:554,859...557,759 JBrowse link
G Faim2 Fas apoptotic inhibitory molecule 2 ISO (MGI:MGI:5295128|PMID:21957071) UniProtKB PMID:21957071 MGI:MGI:5295128 NCBI chrNW_004936512:7,544,047...7,575,922 JBrowse link
G Herc1 HECT and RLD domain containing E3 ubiquitin protein ligase family member 1 ISO (MGI:MGI:4461108|PMID:20041218) MGI PMID:20041218 MGI:MGI:4461108 NCBI chrNW_004936471:24,142,227...24,330,966 JBrowse link
G Ldb1 LIM domain binding 1 ISO (MGI:MGI:3718715|PMID:17664423) MGI PMID:17664423 MGI:MGI:3718715 NCBI chrNW_004936600:3,714,630...3,728,813 JBrowse link
G Lhx1 LIM homeobox 1 ISO (MGI:MGI:3718715|PMID:17664423) MGI PMID:17664423 MGI:MGI:3718715 NCBI chrNW_004936490:1,324,378...1,332,177 JBrowse link
G Lhx5 LIM homeobox 5 ISO (MGI:MGI:3718715|PMID:17664423) MGI PMID:17664423 MGI:MGI:3718715 NCBI chrNW_004936668:3,246,456...3,255,353 JBrowse link
G Psap prosaposin ISO (MGI:MGI:3512714|PMID:15345707) MGI PMID:15345707 MGI:MGI:3512714 NCBI chrNW_004936521:6,975,844...7,009,460 JBrowse link
G Rora RAR related orphan receptor A ISO (MGI:MGI:86446|PMID:8996814) MGI PMID:8996814 MGI:MGI:86446 NCBI chrNW_004936471:21,402,056...21,567,908 JBrowse link
G Skor2 SKI family transcriptional corepressor 2 ISO (MGI:MGI:5565016|PMID:24491816)
(MGI:MGI:5300220|PMID:21937600)
MGI PMID:21937600, PMID:24491816 MGI:MGI:5300220, MGI:MGI:5565016 NCBI chrNW_004936983:156,466...197,281 JBrowse link
G Slc25a46 solute carrier family 25 member 46 ISO (MGI:MGI:5921109|PMID:28934388) MGI PMID:28934388 MGI:MGI:5921109 NCBI chrNW_004936531:5,177,750...5,201,362 JBrowse link
G Top2a DNA topoisomerase II alpha ISO RGD PMID:11170002 RGD:8693630 NCBI chrNW_004936490:15,441,463...15,465,692 JBrowse link
G Ttc21b tetratricopeptide repeat domain 21B ISO (MGI:MGI:6152587|PMID:29615573) MGI PMID:29615573 MGI:MGI:6152587 NCBI chrNW_004936469:13,365,168...13,454,340 JBrowse link
G Ttll1 tubulin tyrosine ligase like 1 ISO (MGI:MGI:6269036|PMID:30420556) MGI PMID:30420556 MGI:MGI:6269036 NCBI chrNW_004936718:869,901...884,708 JBrowse link
cerebral cortex GABAergic interneuron development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rac1 Rac family small GTPase 1 ISO (MGI:MGI:5569596|PMID:23258346) MGI PMID:23258346 MGI:MGI:5569596 NCBI chrNW_004936750:107,689...122,679 JBrowse link
G Rac3 Rac family small GTPase 3 ISO (MGI:MGI:5569596|PMID:23258346) MGI PMID:23258346 MGI:MGI:5569596 NCBI chrNW_004936594:5,527,788...5,530,694 JBrowse link
cerebral cortex GABAergic interneuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ascl1 achaete-scute family bHLH transcription factor 1 ISO (PMID:12050665) UniProtKB PMID:12050665 NCBI chrNW_004936492:11,315,929...11,317,166 JBrowse link
G Dlx1 distal-less homeobox 1 ISO (MGI:MGI:3574146|PMID:15028753) MGI PMID:15028753 MGI:MGI:3574146 NCBI chrNW_004936509:2,248,181...2,250,991 JBrowse link
G Dlx2 distal-less homeobox 2 ISO (MGI:MGI:3574146|PMID:15028753) MGI PMID:15028753 MGI:MGI:3574146 NCBI chrNW_004936509:2,262,873...2,265,391 JBrowse link
G Nkx2-1 NK2 homeobox 1 ISO (MGI:MGI:3834782|PMID:18786356)
(MGI:MGI:3574146|PMID:15028753)
MGI PMID:15028753, PMID:18786356 MGI:MGI:3574146, MGI:MGI:3834782 NCBI chrNW_004936494:10,517,488...10,520,567 JBrowse link
cerebral cortex GABAergic interneuron fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dlx1 distal-less homeobox 1 ISO (MGI:MGI:3775335|PMID:17678855) MGI PMID:17678855 MGI:MGI:3775335 NCBI chrNW_004936509:2,248,181...2,250,991 JBrowse link
G Dlx2 distal-less homeobox 2 ISO (MGI:MGI:3775335|PMID:17678855) MGI PMID:17678855 MGI:MGI:3775335 NCBI chrNW_004936509:2,262,873...2,265,391 JBrowse link
cerebral cortex GABAergic interneuron migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arx aristaless related homeobox ISO (MGI:MGI:3709215|PMID:17460091) MGI PMID:17460091 MGI:MGI:3709215 NCBI chrNW_004936836:295,090...306,756 JBrowse link
G Cntn2 contactin 2 ISO (MGI:MGI:2155629|PMID:11714688) MGI PMID:11714688 MGI:MGI:2155629 NCBI chrNW_004936557:7,297,429...7,320,666 JBrowse link
G Drd1 dopamine receptor D1 ISO (MGI:MGI:3709536|PMID:17409246) MGI PMID:17409246 MGI:MGI:3709536 NCBI chrNW_004936609:790,647...795,187 JBrowse link
G Drd2 dopamine receptor D2 ISO (MGI:MGI:3709536|PMID:17409246) MGI PMID:17409246 MGI:MGI:3709536 NCBI chrNW_004936612:1,094,686...1,154,149 JBrowse link
G Fezf2 FEZ family zinc finger 2 ISO (MGI:MGI:5140686|PMID:21338885) MGI PMID:21338885 MGI:MGI:5140686 NCBI chrNW_004936637:4,045,224...4,051,058 JBrowse link
G Lhx6 LIM homeobox 6 ISO (MGI:MGI:3702257|PMID:17376969) MGI PMID:17376969 MGI:MGI:3702257 NCBI chrNW_004936487:10,591,532...10,616,017 JBrowse link
cerebral cortex neuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Celf1 CUGBP Elav-like family member 1 ISO (MGI:MGI:6405956|PMID:32245946) MGI PMID:32245946 MGI:MGI:6405956 NCBI chrNW_004936562:1,699,774...1,785,285 JBrowse link
G Chd5 chromodomain helicase DNA binding protein 5 ISO (MGI:MGI:5532595|PMID:23948251) UniProtKB PMID:23948251 MGI:MGI:5532595 NCBI chrNW_004936623:988,423...1,046,969 JBrowse link
G CUNH21orf91 chromosome unknown C21orf91 homolog ISO (MGI:MGI:5908509|PMID:27404227) UniProtKB PMID:27404227 MGI:MGI:5908509 NCBI chrNW_004936505:10,190,248...10,219,502 JBrowse link
G Elavl4 ELAV like RNA binding protein 4 ISO (MGI:MGI:6405956|PMID:32245946) MGI PMID:32245946 MGI:MGI:6405956 NCBI chrNW_004936522:10,349,684...10,435,963 JBrowse link
G Emx1 empty spiracles homeobox 1 ISO (MGI:MGI:5468205|PMID:23178126) MGI PMID:23178126 MGI:MGI:5468205 NCBI chrNW_004936491:16,745,310...16,762,422 JBrowse link
G Eomes eomesodermin ISO (MGI:MGI:3831469|PMID:18940588) UniProtKB PMID:18940588 MGI:MGI:3831469 NCBI chrNW_004936473:18,825,969...18,833,179 JBrowse link
G Fezf2 FEZ family zinc finger 2 ISO (MGI:MGI:5140686|PMID:21338885) MGI PMID:21338885 MGI:MGI:5140686 NCBI chrNW_004936637:4,045,224...4,051,058 JBrowse link
G Gdpd5 glycerophosphodiester phosphodiesterase domain containing 5 ISO (MGI:MGI:5437785|PMID:22951639) MGI PMID:22951639 MGI:MGI:5437785 NCBI chrNW_004936498:4,225,855...4,288,082 JBrowse link
G Hprt1 hypoxanthine phosphoribosyltransferase 1 ISO (MGI:MGI:3622601|PMID:11297820) MGI PMID:11297820 MGI:MGI:3622601 NCBI chrNW_004936691:650,753...694,362 JBrowse link
G Lhx6 LIM homeobox 6 ISO (MGI:MGI:3794908|PMID:18339674) MGI PMID:18339674 MGI:MGI:3794908 NCBI chrNW_004936487:10,591,532...10,616,017 JBrowse link
G LOC101977674 oligophrenin-1 ISO (PMID:27160703) ARUK-UCL PMID:27160703 NCBI chrNW_004936635:6,966...243,209 JBrowse link
G Nkx2-1 NK2 homeobox 1 ISO (MGI:MGI:3794908|PMID:18339674) MGI PMID:18339674 MGI:MGI:3794908 NCBI chrNW_004936494:10,517,488...10,520,567 JBrowse link
G Nr2e1 nuclear receptor subfamily 2 group E member 1 ISO (MGI:MGI:3588942|PMID:15950290), (MGI:MGI:3607388|PMID:12902391) MGI PMID:12902391, PMID:15950290 MGI:MGI:3588942, MGI:MGI:3607388 NCBI chrNW_004936564:4,432,556...4,453,056 JBrowse link
G Pafah1b1 platelet activating factor acetylhydrolase 1b regulatory subunit 1 ISO RGD PMID:16144905 RGD:1601501 NCBI chrNW_004936538:8,612,142...8,693,698 JBrowse link
G Pex5 peroxisomal biogenesis factor 5 ISO (MGI:MGI:1096198|PMID:9288097) MGI PMID:9288097 MGI:MGI:1096198 NCBI chrNW_004936709:587,296...606,085 JBrowse link
G Sin3a SIN3 transcription regulator family member A ISO (MGI:MGI:6152283|PMID:27399968) UniProt PMID:27399968 MGI:MGI:6152283 NCBI chrNW_004936471:34,206,084...34,260,538 JBrowse link
G Tox thymocyte selection associated high mobility group box ISO (MGI:MGI:5632052|PMID:25527292) UniProt PMID:25527292 MGI:MGI:5632052 NCBI chrNW_004936496:13,847,210...14,146,110 JBrowse link
G Znf335 zinc finger protein 335 ISO (MGI:MGI:5468205|PMID:23178126) MGI PMID:23178126 MGI:MGI:5468205 NCBI chrNW_004936514:7,070,030...7,090,466 JBrowse link
chemoattraction of axon term browser