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ONTOLOGY REPORT - ANNOTATIONS


Term:neuron differentiation
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Accession:GO:0030182 term browser browse the term
Definition:The process in which a relatively unspecialized cell acquires specialized features of a neuron.


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neuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abl1 ABL proto-oncogene 1, non-receptor tyrosine kinase ISO (MGI:MGI:1327082|PMID:9883720) MGI PMID:9883720 MGI:MGI:1327082 NCBI chrNW_004955513:652,048...799,182
Ensembl chrNW_004955513:653,252...799,239
JBrowse link
G Abl2 ABL proto-oncogene 2, non-receptor tyrosine kinase ISO (MGI:MGI:1327082|PMID:9883720) MGI PMID:9883720 MGI:MGI:1327082 NCBI chrNW_004955406:18,435,984...18,527,967
Ensembl chrNW_004955406:18,437,672...18,527,698
JBrowse link
G Acsl4 acyl-CoA synthetase long chain family member 4 ISO (MGI:MGI:5316151|PMID:22366036) MGI PMID:22366036 MGI:MGI:5316151 NCBI chrNW_004955490:6,143,833...6,228,395
Ensembl chrNW_004955490:6,143,833...6,228,452
JBrowse link
G Adnp2 ADNP homeobox 2 ISO (MGI:MGI:3793419|PMID:18179478) UniProtKB PMID:18179478 MGI:MGI:3793419 NCBI chrNW_004955402:63,312,588...63,346,307
Ensembl chrNW_004955402:63,311,741...63,347,641
JBrowse link
G Aifm1 apoptosis inducing factor mitochondria associated 1 ISO (PMID:20111043) UniProtKB PMID:20111043 NCBI chrNW_004955473:4,891,955...4,925,705
Ensembl chrNW_004955473:4,891,955...4,926,428
JBrowse link
G Ak1 adenylate kinase 1 ISO RGD PMID:10101232 RGD:727267 NCBI chrNW_004955419:799,415...807,138
Ensembl chrNW_004955419:799,410...811,029
JBrowse link
G Aldh1a2 aldehyde dehydrogenase 1 family member A2 ISO (MGI:MGI:3574740|PMID:15753214)
(MGI:MGI:3530707|PMID:15652703)
MGI PMID:15652703, PMID:15753214 MGI:MGI:3530707, MGI:MGI:3574740 NCBI chrNW_004955450:16,406,578...16,453,048
Ensembl chrNW_004955450:16,406,436...16,453,180
JBrowse link
G Ascl1 achaete-scute family bHLH transcription factor 1 ISO (MGI:MGI:3778596|PMID:18184563), (MGI:MGI:5897542|PMID:24243019)
(MGI:MGI:3042488|PMID:15071116)
(MGI:MGI:3045910|PMID:15133515), (MGI:MGI:3639051|PMID:16469766)
UniProt
MGI
PMID:15071116, PMID:15133515, PMID:16469766, PMID:18184563, PMID:24243019 MGI:MGI:3042488, MGI:MGI:3045910, MGI:MGI:3639051, MGI:MGI:3778596, MGI:MGI:5897542 NCBI chrNW_004955405:37,941,243...37,943,641
Ensembl chrNW_004955405:37,941,243...37,943,641
JBrowse link
G Atf4 activating transcription factor 4 ISO RGD PMID:19322020 RGD:11354958 NCBI chrNW_004955413:25,406,589...25,408,727
Ensembl chrNW_004955413:25,406,589...25,412,218
JBrowse link
G Atoh1 atonal bHLH transcription factor 1 ISO (MGI:MGI:3042554|PMID:14999071) MGI PMID:14999071 MGI:MGI:3042554 NCBI chrNW_004955405:4,461,704...4,462,756
Ensembl chrNW_004955405:4,461,704...4,462,756
JBrowse link
G Atp2b2 ATPase plasma membrane Ca2+ transporting 2 ISO (PMID:11259493) UniProtKB PMID:11259493 NCBI chrNW_004955561:1,727,935...1,851,907
Ensembl chrNW_004955561:1,727,935...1,851,907
JBrowse link
G Bag1 BAG cochaperone 1 ISO (MGI:MGI:2389593|PMID:11965493) MGI PMID:11965493 MGI:MGI:2389593 NCBI chrNW_004955472:2,394,317...2,405,199 JBrowse link
G Baiap2 BAR/IMD domain containing adaptor protein 2 ISO RGD PMID:25586189 RGD:11576287 NCBI chrNW_004955506:1,868,624...1,936,786
Ensembl chrNW_004955506:1,868,624...1,936,786
JBrowse link
G Barhl2 BarH like homeobox 2 ISO (MGI:MGI:3039051|PMID:14998930)
(MGI:MGI:2654373|PMID:12657654)
MGI PMID:12657654, PMID:14998930 MGI:MGI:2654373, MGI:MGI:3039051 NCBI chrNW_004955423:3,516,973...3,522,459
Ensembl chrNW_004955423:3,516,660...3,522,536
JBrowse link
G Bhlhe22 basic helix-loop-helix family member e22 ISO (MGI:MGI:3703109|PMID:17092954) MGI PMID:17092954 MGI:MGI:3703109 NCBI chrNW_004955444:14,458,307...14,460,441 JBrowse link
G Brsk1 BR serine/threonine kinase 1 ISO (MGI:MGI:3528781|PMID:15705853) MGI PMID:15705853 MGI:MGI:3528781 NCBI chrNW_004955567:924,728...943,092
Ensembl chrNW_004955567:924,734...943,701
JBrowse link
G Brsk2 BR serine/threonine kinase 2 ISO (MGI:MGI:3528781|PMID:15705853) MGI PMID:15705853 MGI:MGI:3528781 NCBI chrNW_004955476:10,911,515...10,951,544
Ensembl chrNW_004955476:10,911,515...10,929,183
JBrowse link
G Btg2 BTG anti-proliferation factor 2 ISO PMID:12360398 MGI
RGD
PMID:12360398, PMID:23000394 RGD:2289077, RGD:7257594 NCBI chrNW_004955406:39,303,221...39,307,308
Ensembl chrNW_004955406:39,303,175...39,308,778
JBrowse link
G Casp3 caspase 3 ISO RGD PMID:15248196 RGD:1358477 NCBI chrNW_004955403:24,315,712...24,326,271 JBrowse link
G Cdk5 cyclin dependent kinase 5 ISO PMID:8846918
(MGI:MGI:3607011|PMID:16237170)
UniProt
MGI
PMID:8846918, PMID:16237170 MGI:MGI:3607011, RGD:8554279 NCBI chrNW_004955491:5,491,744...5,497,280
Ensembl chrNW_004955491:5,491,744...5,497,280
JBrowse link
G Cdk5r1 cyclin dependent kinase 5 regulatory subunit 1 ISO PMID:8846918 UniProt PMID:8846918 RGD:8554279 NCBI chrNW_004955481:7,408,089...7,411,813
Ensembl chrNW_004955481:7,408,205...7,409,128
JBrowse link
G Cebpb CCAAT enhancer binding protein beta ISO (MGI:MGI:2158848|PMID:11733516) MGI PMID:11733516 MGI:MGI:2158848 NCBI chrNW_004955445:8,060,432...8,061,289 JBrowse link
G Cend1 cell cycle exit and neuronal differentiation 1 ISO (MGI:MGI:5490923|PMID:23658157) UniProtKB PMID:23658157 MGI:MGI:5490923 NCBI chrNW_004955476:11,339,586...11,341,996
Ensembl chrNW_004955476:11,339,586...11,341,996
JBrowse link
G Chat choline O-acetyltransferase ISO (MGI:MGI:3045889|PMID:12441053) MGI PMID:12441053 MGI:MGI:3045889 NCBI chrNW_004955556:650,290...695,135
Ensembl chrNW_004955556:650,279...693,276
JBrowse link
G Chrdl1 chordin like 1 ISO RGD PMID:14684875 RGD:1299653 NCBI chrNW_004955490:5,108,308...5,218,679
Ensembl chrNW_004955490:5,108,308...5,257,445
JBrowse link
G Cops2 COP9 signalosome subunit 2 ISO RGD PMID:12524175 RGD:634483 NCBI chrNW_004955409:4,859,971...4,888,487
Ensembl chrNW_004955409:4,859,972...4,891,575
JBrowse link
G Ctnnb1 catenin beta 1 ISO (MGI:MGI:5689084|PMID:25009587) ParkinsonsUK-UCL PMID:25009587 MGI:MGI:5689084 NCBI chrNW_004955420:29,030,716...29,047,447
Ensembl chrNW_004955420:29,030,716...29,047,449
JBrowse link
G Dapk3 death associated protein kinase 3 ISO RGD PMID:12445468 RGD:632627 NCBI chrNW_004955495:4,809,475...4,822,210
Ensembl chrNW_004955495:4,810,474...4,823,259
JBrowse link
G Ddit4 DNA damage inducible transcript 4 ISO PMID:21368030 UniProt PMID:21368030 RGD:8554300 NCBI chrNW_004955437:19,322,407...19,324,562
Ensembl chrNW_004955437:19,322,407...19,324,562
JBrowse link
G Dmd dystrophin ISO RGD PMID:8858620 RGD:12880361 NCBI chrNW_004955535:1,283,084...3,297,015
Ensembl chrNW_004955535:1,283,523...3,299,542
JBrowse link
G Dnmt1 DNA methyltransferase 1 ISO RGD PMID:19660178 RGD:9588289 NCBI chrNW_004955495:1,465,529...1,505,379
Ensembl chrNW_004955495:1,465,480...1,505,462
JBrowse link
G Dnmt3a DNA methyltransferase 3 alpha ISO RGD PMID:19660178 RGD:9588289 NCBI chrNW_004955469:7,264,431...7,367,059
Ensembl chrNW_004955469:7,269,952...7,367,059
JBrowse link
G Dok5 docking protein 5 ISO (MGI:MGI:2137764|PMID:11470823) MGI PMID:11470823 MGI:MGI:2137764 NCBI chrNW_004955445:4,439,299...4,601,618
Ensembl chrNW_004955445:4,438,673...4,601,618
JBrowse link
G Dpysl5 dihydropyrimidinase like 5 ISO RGD PMID:11034345 RGD:632608 NCBI chrNW_004955469:8,838,167...8,920,991
Ensembl chrNW_004955469:8,838,888...8,922,388
JBrowse link
G Drgx dorsal root ganglia homeobox ISO (MGI:MGI:3694508|PMID:16978876) MGI PMID:16978876 MGI:MGI:3694508 NCBI chrNW_004955556:842,714...870,248
Ensembl chrNW_004955556:842,714...870,248
JBrowse link
G Dync2h1 dynein cytoplasmic 2 heavy chain 1 ISO (MGI:MGI:5441704|PMID:21552265) MGI PMID:21552265 MGI:MGI:5441704 NCBI chrNW_004955412:6,267,726...6,518,888
Ensembl chrNW_004955412:6,268,214...6,518,468
JBrowse link
G Edn3 endothelin 3 ISO (MGI:MGI:1267304|PMID:9624616) MGI PMID:9624616 MGI:MGI:1267304 NCBI chrNW_004955445:215,910...238,153
Ensembl chrNW_004955445:215,859...237,760
JBrowse link
G Efna1 ephrin A1 ISO (MGI:MGI:3050703|PMID:15145949) MGI PMID:15145949 MGI:MGI:3050703 NCBI chrNW_004955545:1,610,929...1,617,217
Ensembl chrNW_004955545:1,610,929...1,617,460
JBrowse link
G Elavl4 ELAV like RNA binding protein 4 ISO RGD PMID:9514914 RGD:9685344 NCBI chrNW_004955464:8,699,142...8,847,289
Ensembl chrNW_004955464:8,699,088...8,788,878
JBrowse link
G Emx1 empty spiracles homeobox 1 ISO (MGI:MGI:2451205|PMID:12561075) MGI PMID:12561075 MGI:MGI:2451205 NCBI chrNW_004955424:12,666,280...12,683,023
Ensembl chrNW_004955424:12,664,104...12,683,023
JBrowse link
G Emx2 empty spiracles homeobox 2 ISO (MGI:MGI:2451205|PMID:12561075) MGI PMID:12561075 MGI:MGI:2451205 NCBI chrNW_004955431:22,192,446...22,199,141
Ensembl chrNW_004955431:22,192,446...22,199,279
JBrowse link
G En1 engrailed homeobox 1 ISO (MGI:MGI:3522127|PMID:15340832), (MGI:MGI:3525936|PMID:15607945), (MGI:MGI:3578062|PMID:15175251) MGI PMID:15175251, PMID:15340832, PMID:15607945 MGI:MGI:3522127, MGI:MGI:3525936, MGI:MGI:3578062 NCBI chrNW_004955459:10,839,581...10,844,198 JBrowse link
G En2 engrailed homeobox 2 ISO (MGI:MGI:3522127|PMID:15340832), (MGI:MGI:3525936|PMID:15607945), (MGI:MGI:3578062|PMID:15175251) MGI PMID:15175251, PMID:15340832, PMID:15607945 MGI:MGI:3522127, MGI:MGI:3525936, MGI:MGI:3578062 NCBI chrNW_004955491:8,422,295...8,427,038 JBrowse link
G Eomes eomesodermin ISO (MGI:MGI:3806373|PMID:18794345) MGI PMID:18794345 MGI:MGI:3806373 NCBI chrNW_004955430:19,280,460...19,287,060
Ensembl chrNW_004955430:19,281,602...19,286,867
JBrowse link
G Epha2 EPH receptor A2 ISO (MGI:MGI:3050703|PMID:15145949) MGI PMID:15145949 MGI:MGI:3050703 NCBI chrNW_004955527:2,120,447...2,151,932
Ensembl chrNW_004955527:2,120,266...2,152,781
JBrowse link
G Ercc6 ERCC excision repair 6, chromatin remodeling factor ISO (PMID:24874740) UniProt PMID:24874740 NCBI chrNW_004955556:745,175...812,215
Ensembl chrNW_004955556:748,231...813,133
JBrowse link
G Fut9 fucosyltransferase 9 ISO (PMID:17335083) UniProt PMID:17335083 NCBI chrNW_004955411:22,112,230...22,318,518
Ensembl chrNW_004955411:22,203,809...22,318,518
JBrowse link
G Gas7 growth arrest specific 7 ISO (MGI:MGI:3698406|PMID:15725398) MGI PMID:15725398 MGI:MGI:3698406 NCBI chrNW_004955467:6,979,718...7,223,948
Ensembl chrNW_004955467:7,112,123...7,217,591
JBrowse link
G Gata2 GATA binding protein 2 ISO (MGI:MGI:3035845|PMID:14973276) MGI PMID:14973276 MGI:MGI:3035845 NCBI chrNW_004955429:15,326,551...15,334,774
Ensembl chrNW_004955429:15,327,113...15,336,460
JBrowse link
G Gata3 GATA binding protein 3 ISO (MGI:MGI:4836772|PMID:20818386) MGI PMID:20818386 MGI:MGI:4836772 NCBI chrNW_004955421:24,448,446...24,477,885
Ensembl chrNW_004955421:24,457,496...24,478,744
JBrowse link
G Gdnf glial cell derived neurotrophic factor ISO RGD PMID:15109990 RGD:1358711 NCBI chrNW_004955426:22,386,613...22,412,324
Ensembl chrNW_004955426:22,386,450...22,412,324
JBrowse link
G Gfra1 GDNF family receptor alpha 1 ISO RGD PMID:21865882 RGD:6218962 NCBI chrNW_004955431:20,859,152...21,070,886
Ensembl chrNW_004955431:20,866,685...21,070,853
JBrowse link
G Gpc2 glypican 2 ISO RGD PMID:8294498 RGD:728608 NCBI chrNW_004955573:630,859...637,296
Ensembl chrNW_004955573:630,859...637,296
JBrowse link
G Hdac1 histone deacetylase 1 ISO (MGI:MGI:3844761|PMID:19380719) MGI PMID:19380719 MGI:MGI:3844761 NCBI chrNW_004955452:10,636,366...10,668,873
Ensembl chrNW_004955452:10,636,366...10,670,864
JBrowse link
G Hdac2 histone deacetylase 2 ISO (MGI:MGI:3844761|PMID:19380719) MGI PMID:19380719 MGI:MGI:3844761 NCBI chrNW_004955526:2,739,099...2,759,640
Ensembl chrNW_004955526:2,728,377...2,759,707
JBrowse link
G Hdac5 histone deacetylase 5 ISO RGD PMID:12850547 RGD:704464 NCBI chrNW_004955451:17,223,217...17,246,451
Ensembl chrNW_004955451:17,223,287...17,244,051
JBrowse link
G Hdac6 histone deacetylase 6 ISO RGD PMID:12850547 RGD:704464 NCBI chrNW_004955543:348,314...378,391
Ensembl chrNW_004955543:348,019...378,071
JBrowse link
G Hdac7 histone deacetylase 7 ISO RGD PMID:12850547 RGD:704464 NCBI chrNW_004955500:6,692,656...6,707,453
Ensembl chrNW_004955500:6,693,668...6,709,864
JBrowse link
G Hdac9 histone deacetylase 9 ISO RGD PMID:12850547 RGD:704464 NCBI chrNW_004955410:21,046,312...21,932,029
Ensembl chrNW_004955410:21,245,562...21,932,023
JBrowse link
G Helt helt bHLH transcription factor ISO (MGI:MGI:3042488|PMID:15071116) MGI PMID:15071116 MGI:MGI:3042488 NCBI chrNW_004955403:23,996,488...23,998,290
Ensembl chrNW_004955403:23,996,488...23,998,290
JBrowse link
G Hes1 hes family bHLH transcription factor 1 ISO RGD PMID:9634594 RGD:9685379 NCBI chrNW_004955420:14,565,921...14,568,447
Ensembl chrNW_004955420:14,564,283...14,568,447
JBrowse link
G Hes5 hes family bHLH transcription factor 5 ISO RGD PMID:1400497 RGD:728403 NCBI chrNW_004955486:8,700,212...8,701,581
Ensembl chrNW_004955486:8,700,162...8,701,748
JBrowse link
G Hipk1 homeodomain interacting protein kinase 1 ISO (MGI:MGI:4818711|PMID:20579985) DFLAT PMID:20579985 MGI:MGI:4818711 NCBI chrNW_004955435:17,201,866...17,257,371
Ensembl chrNW_004955435:17,172,651...17,257,371
JBrowse link
G Hipk2 homeodomain interacting protein kinase 2 ISO (MGI:MGI:4818711|PMID:20579985) DFLAT PMID:20579985 MGI:MGI:4818711 NCBI chrNW_004955494:3,365,826...3,554,735
Ensembl chrNW_004955494:3,393,049...3,554,844
JBrowse link
G Hoxc8 homeobox C8 ISO (MGI:MGI:3574740|PMID:15753214) MGI PMID:15753214 MGI:MGI:3574740 NCBI chrNW_004955458:1,267,247...1,271,354
Ensembl chrNW_004955458:1,267,247...1,272,690
JBrowse link
G Hoxd1 homeobox D1 ISO (MGI:MGI:4946448|PMID:21151121) MGI PMID:21151121 MGI:MGI:4946448 NCBI chrNW_004955403:20,476,813...20,478,604
Ensembl chrNW_004955403:20,476,645...20,478,604
JBrowse link
G Hspa5 heat shock protein family A (Hsp70) member 5 ISO RGD PMID:19322020 RGD:11354958 NCBI chrNW_004955419:3,055,420...3,060,208
Ensembl chrNW_004955419:3,055,420...3,062,131
JBrowse link
G Id1 inhibitor of DNA binding 1, HLH protein ISO RGD PMID:7908517 RGD:729182 NCBI chrNW_004955422:29,337,969...29,339,178
Ensembl chrNW_004955422:29,337,757...29,339,178
JBrowse link
G Id2 inhibitor of DNA binding 2 ISO RGD PMID:7908517 RGD:729182 NCBI chrNW_004955487:878,326...880,783
Ensembl chrNW_004955487:878,326...880,783
JBrowse link
G Id3 inhibitor of DNA binding 3, HLH protein ISO RGD PMID:7908517 RGD:729182 NCBI chrNW_004955452:3,537,352...3,538,921
Ensembl chrNW_004955452:3,537,021...3,560,954
JBrowse link
G Ier2 immediate early response 2 ISO PMID:17156131 UniProt PMID:17156131 RGD:10054080 NCBI chrNW_004955415:32,159,762...32,161,530
Ensembl chrNW_004955415:32,159,935...32,160,624
JBrowse link
G Isl1 ISL LIM homeobox 1 ISO (MGI:MGI:3778709|PMID:18367596)
(MGI:MGI:78615|PMID:8565076)
(MGI:MGI:3790180|PMID:18434416)
MGI PMID:8565076, PMID:18367596, PMID:18434416 MGI:MGI:3778709, MGI:MGI:3790180, MGI:MGI:78615 NCBI chrNW_004955446:15,824,956...15,835,000
Ensembl chrNW_004955446:15,824,035...15,835,046
JBrowse link
G Itm2c integral membrane protein 2C ISO (PMID:18452648) UniProtKB PMID:18452648 NCBI chrNW_004955453:4,546,736...4,557,649
Ensembl chrNW_004955453:4,543,476...4,557,757
JBrowse link
G Kdm2a lysine demethylase 2A ISO (MGI:MGI:5615026|PMID:25463925) MGI PMID:25463925 MGI:MGI:5615026 NCBI chrNW_004955422:18,201,243...18,308,163
Ensembl chrNW_004955422:18,200,758...18,308,163
JBrowse link
G L1cam L1 cell adhesion molecule ISO RGD PMID:24841827 RGD:11570515 NCBI chrNW_004955580:548,442...561,580
Ensembl chrNW_004955580:549,368...561,486
JBrowse link
G Ldb1 LIM domain binding 1 ISO (PMID:8876198) UniProtKB PMID:8876198 NCBI chrNW_004955485:8,229,517...8,242,003
Ensembl chrNW_004955485:8,229,517...8,241,142
JBrowse link
G Lhx2 LIM homeobox 2 ISO (MGI:MGI:3044864|PMID:15173589) RGD
MGI
PMID:7678338, PMID:15173589 MGI:MGI:3044864, RGD:70777 NCBI chrNW_004955419:3,999,364...4,019,543
Ensembl chrNW_004955419:3,998,242...4,018,875
JBrowse link
G Lmx1a LIM homeobox transcription factor 1 alpha ISO (MGI:MGI:3051929|PMID:15183721) MGI PMID:15183721 MGI:MGI:3051929 NCBI chrNW_004955462:11,328,583...11,484,438
Ensembl chrNW_004955462:11,329,676...11,477,770
JBrowse link
G Lmx1b LIM homeobox transcription factor 1 beta ISO (MGI:MGI:2675692|PMID:12897786), (MGI:MGI:3051709|PMID:15229182) MGI PMID:12897786, PMID:15229182 MGI:MGI:2675692, MGI:MGI:3051709 NCBI chrNW_004955419:1,782,566...1,857,375
Ensembl chrNW_004955419:1,782,566...1,857,375
JBrowse link
G Map2k1 mitogen-activated protein kinase kinase 1 ISO (MGI:MGI:3050703|PMID:15145949) RGD
MGI
PMID:15145949, PMID:17202850 MGI:MGI:3050703, RGD:2292642 NCBI chrNW_004955450:9,181,851...9,205,277
Ensembl chrNW_004955450:9,181,851...9,239,648
JBrowse link
G Mbd1 methyl-CpG binding domain protein 1 ISO RGD PMID:19660178 RGD:9588289 NCBI chrNW_004955402:35,320,755...35,334,751
Ensembl chrNW_004955402:35,319,810...35,334,678
JBrowse link
G Mecp2 methyl-CpG binding protein 2 ISO (MGI:MGI:3629530|PMID:15345242) RGD
MGI
PMID:12605461, PMID:15345242 MGI:MGI:3629530, RGD:12790706 NCBI chrNW_004955580:674,014...737,586
Ensembl chrNW_004955580:679,109...735,288
JBrowse link
G Mef2c myocyte enhancer factor 2C ISO (PMID:8455629)
(MGI:MGI:3804505|PMID:18599437)
UniProtKB PMID:8455629, PMID:18599437 MGI:MGI:3804505 NCBI chrNW_004955418:22,537,388...22,701,434
Ensembl chrNW_004955418:22,537,285...22,701,434
JBrowse link
G Mnx1 motor neuron and pancreas homeobox 1 ISO (MGI:MGI:1935007|PMID:11395002) MGI PMID:11395002 MGI:MGI:1935007 NCBI chrNW_004955579:51,862...74,985 JBrowse link
G Myef2 myelin expression factor 2 ISO (PMID:8455629) UniProtKB PMID:8455629 NCBI chrNW_004955409:5,713,495...5,747,528
Ensembl chrNW_004955409:5,714,124...5,747,140
JBrowse link
G Myt1l myelin transcription factor 1 like ISO (MGI:MGI:5897487|PMID:28379941), (MGI:MGI:5897542|PMID:24243019) UniProtKB PMID:24243019, PMID:28379941 MGI:MGI:5897487, MGI:MGI:5897542 NCBI chrNW_004955487:4,457,145...4,855,369
Ensembl chrNW_004955487:4,725,889...4,855,369
JBrowse link
G Napa NSF attachment protein alpha ISO (MGI:MGI:3033551|PMID:14758363) MGI PMID:14758363 MGI:MGI:3033551 NCBI chrNW_004955574:1,330,911...1,353,392
Ensembl chrNW_004955574:1,330,300...1,353,576
JBrowse link
G Ndn necdin, MAGE family member ISO (MGI:MGI:2389520|PMID:12198120) MGI PMID:12198120 MGI:MGI:2389520 NCBI chrNW_004955416:31,125,354...31,127,010
Ensembl chrNW_004955416:31,125,924...31,126,889
JBrowse link
G Neurog1 neurogenin 1 ISO (MGI:MGI:5467435|PMID:23288605)
(MGI:MGI:3607238|PMID:16145671)
MGI PMID:16145671, PMID:23288605 MGI:MGI:3607238, MGI:MGI:5467435 NCBI chrNW_004955408:30,693,893...30,695,453
Ensembl chrNW_004955408:30,694,496...30,695,221
JBrowse link
G Neurog2 neurogenin 2 ISO (MGI:MGI:3612225|PMID:16396906) MGI PMID:16396906 MGI:MGI:3612225 NCBI chrNW_004955457:14,268,078...14,287,050 JBrowse link
G Nif3l1 NGG1 interacting factor 3 like 1 ISO (MGI:MGI:5619492|PMID:12522100) UniProtKB PMID:12522100 MGI:MGI:5619492 NCBI chrNW_004955403:628,069...640,703
Ensembl chrNW_004955403:628,924...640,703
JBrowse link
G Nnat neuronatin ISO RGD PMID:8949924 RGD:1358323 NCBI chrNW_004955445:19,121,164...19,125,514 JBrowse link
G Notch1 notch receptor 1 ISO (MGI:MGI:86734|PMID:9102301) MGI PMID:9102301 MGI:MGI:86734 NCBI chrNW_004955513:4,225,939...4,264,875
Ensembl chrNW_004955513:4,225,956...4,263,259
JBrowse link
G Nr4a2 nuclear receptor subfamily 4 group A member 2 ISO (MGI:MGI:1202150|PMID:9520484), (MGI:MGI:3041641|PMID:14622207) MGI PMID:9520484, PMID:14622207 MGI:MGI:1202150, MGI:MGI:3041641 NCBI chrNW_004955449:16,928,780...16,944,536
Ensembl chrNW_004955449:16,937,794...16,945,731
JBrowse link
G Nrbp2 nuclear receptor binding protein 2 ISO (PMID:18619852) UniProtKB PMID:18619852 NCBI chrNW_004955454:2,500,360...2,507,372 JBrowse link
G Ntrk2 neurotrophic receptor tyrosine kinase 2 ISO (MGI:MGI:3776308|PMID:15372074) UniProtKB PMID:15372074 MGI:MGI:3776308 NCBI chrNW_004955432:2,284,283...2,629,631
Ensembl chrNW_004955432:2,288,898...2,630,878
JBrowse link
G Ophn1 oligophrenin 1 ISO (PMID:27160703) ARUK-UCL PMID:27160703 NCBI chrNW_004955475:7,576,629...8,019,132
Ensembl chrNW_004955475:7,581,675...8,018,139
JBrowse link
G Otx2 orthodenticle homeobox 2 ISO (MGI:MGI:3578035|PMID:15888661) MGI PMID:15888661 MGI:MGI:3578035 NCBI chrNW_004955466:10,755,143...10,764,957
Ensembl chrNW_004955466:10,755,012...10,765,095
JBrowse link
G Parl presenilin associated rhomboid like ISO RGD PMID:14732705 RGD:12880444 NCBI chrNW_004955420:23,549,125...23,581,782 JBrowse link
G Pcsk9 proprotein convertase subtilisin/kexin type 9 ISO (MGI:MGI:3696588|PMID:16893422)
(MGI:MGI:2450048|PMID:12552133)
HGNC PMID:12552133, PMID:16893422 MGI:MGI:2450048, MGI:MGI:3696588 NCBI chrNW_004955464:4,424,583...4,439,805
Ensembl chrNW_004955464:4,425,435...4,439,842
JBrowse link
G Phox2b paired like homeobox 2B ISO (MGI:MGI:3797655|PMID:18506029) MGI PMID:18506029 MGI:MGI:3797655 NCBI chrNW_004955443:5,935,975...5,938,747
Ensembl chrNW_004955443:5,935,975...5,938,747
JBrowse link
G Pigt phosphatidylinositol glycan anchor biosynthesis class T ISO (MGI:MGI:3621592|PMID:16516892) MGI PMID:16516892 MGI:MGI:3621592 NCBI chrNW_004955445:11,916,898...11,925,578
Ensembl chrNW_004955445:11,915,225...11,925,820
JBrowse link
G Pin1 peptidylprolyl cis/trans isomerase, NIMA-interacting 1 ISO (MGI:MGI:5432836|PMID:22645310) ParkinsonsUK-UCL PMID:22645310 MGI:MGI:5432836 NCBI chrNW_004955495:1,250,557...1,261,617
Ensembl chrNW_004955495:1,250,453...1,266,235
JBrowse link
G Pitx2 paired like homeodomain 2 ISO RGD PMID:16408195 RGD:5131998 NCBI chrNW_004955457:15,803,493...15,823,193
Ensembl chrNW_004955457:15,803,219...15,823,310
JBrowse link
G Pou3f2 POU class 3 homeobox 2 ISO (MGI:MGI:3703099|PMID:17141158), (MGI:MGI:5897542|PMID:24243019) UniProtKB PMID:17141158, PMID:24243019 MGI:MGI:3703099, MGI:MGI:5897542 NCBI chrNW_004955411:24,714,899...24,722,048
Ensembl chrNW_004955411:24,715,088...24,716,695
JBrowse link
G Pou4f1 POU class 4 homeobox 1 ISO (MGI:MGI:3587126|PMID:16040009) MGI PMID:16040009 MGI:MGI:3587126 NCBI chrNW_004955404:28,812,762...28,818,024 JBrowse link
G Pou4f2 POU class 4 homeobox 2 ISO (MGI:MGI:3790171|PMID:18434421)
(MGI:MGI:3621691|PMID:9630743)
(MGI:MGI:80981|PMID:8637595)
MGI PMID:8637595, PMID:9630743, PMID:18434421 MGI:MGI:3621691, MGI:MGI:3790171, MGI:MGI:80981 NCBI chrNW_004955428:2,325,775...2,329,122
Ensembl chrNW_004955428:2,324,834...2,329,205
JBrowse link
G Ppia peptidylprolyl isomerase A ISO (MGI:MGI:3640624|PMID:16352598) MGI PMID:16352598 MGI:MGI:3640624 NCBI chrNW_004955456:7,381,923...7,383,203 JBrowse link
G Ppp1cc protein phosphatase 1 catalytic subunit gamma ISO PMID:17202132 MGI PMID:17202132 RGD:8553329 NCBI chrNW_004955482:7,582,605...7,605,340
Ensembl chrNW_004955482:7,578,782...7,606,132
JBrowse link
G Ppp2r2b protein phosphatase 2 regulatory subunit Bbeta ISO RGD PMID:12716901 RGD:2314541 NCBI chrNW_004955415:7,054,296...7,510,179
Ensembl chrNW_004955415:7,090,671...7,511,995
JBrowse link
G Prkcq protein kinase C theta ISO RGD PMID:10944456 RGD:1625618 NCBI chrNW_004955421:23,072,607...23,151,591
Ensembl chrNW_004955421:23,070,955...23,175,699
JBrowse link
G Psd pleckstrin and Sec7 domain containing ISO RGD PMID:11834294 RGD:632586 NCBI chrNW_004955485:7,979,654...7,994,662
Ensembl chrNW_004955485:7,979,654...7,994,662
JBrowse link
G Psen1 presenilin 1 ISO (MGI:MGI:1858528|PMID:10821758) MGI PMID:10821758 MGI:MGI:1858528 NCBI chrNW_004955523:2,128,529...2,210,737
Ensembl chrNW_004955523:2,128,529...2,210,737
JBrowse link
G Ptprd protein tyrosine phosphatase receptor type D ISO (MGI:MGI:5294265|PMID:21940441) BHF-UCL PMID:21940441 MGI:MGI:5294265 NCBI chrNW_004955434:12,033,825...14,132,636
Ensembl chrNW_004955434:12,031,420...12,428,774
JBrowse link
G Ptprr protein tyrosine phosphatase receptor type R ISO RGD PMID:7814416 RGD:729713 NCBI chrNW_004955405:10,767,548...11,133,695
Ensembl chrNW_004955405:10,767,507...11,026,914
JBrowse link
G Rb1 RB transcriptional corepressor 1 ISO (MGI:MGI:3664376|PMID:7958874) MGI PMID:7958874 MGI:MGI:3664376 NCBI chrNW_004955431:1,960,765...2,124,576
Ensembl chrNW_004955431:1,960,661...2,124,576
JBrowse link
G Rbpj recombination signal binding protein for immunoglobulin kappa J region ISO (MGI:MGI:86734|PMID:9102301) MGI PMID:9102301 MGI:MGI:86734 NCBI chrNW_004955443:18,783,061...19,029,441
Ensembl chrNW_004955443:18,783,061...18,910,228
JBrowse link
G Ret ret proto-oncogene ISO (MGI:MGI:3761419|PMID:17553423) MGI PMID:17553423 MGI:MGI:3761419 NCBI chrNW_004955546:1,221,995...1,252,147
Ensembl chrNW_004955546:1,221,995...1,253,946
JBrowse link
G Rnf112 ring finger protein 112 ISO (MGI:MGI:6154408|PMID:28684796)
(PMID:28684796)
UniProtKB PMID:28684796 MGI:MGI:6154408 NCBI chrNW_004955467:349,703...355,922
Ensembl chrNW_004955467:349,256...355,922
JBrowse link
G Rtn1 reticulon 1 ISO (PMID:9560466) UniProtKB PMID:9560466 NCBI chrNW_004955466:13,290,419...13,454,387 JBrowse link
G Rxrg retinoid X receptor gamma ISO RGD PMID:15664689 RGD:2325974 NCBI chrNW_004955462:11,238,963...11,281,905
Ensembl chrNW_004955462:11,238,794...11,281,956
JBrowse link
G Ryk receptor like tyrosine kinase ISO (MGI:MGI:3822212|PMID:19000841) UniProtKB PMID:19000841 MGI:MGI:3822212 NCBI chrNW_004955501:4,360,051...4,419,083
Ensembl chrNW_004955501:4,328,682...4,419,307
JBrowse link
G S1pr1 sphingosine-1-phosphate receptor 1 ISO RGD PMID:7959012 RGD:61573 NCBI chrNW_004955435:5,880,266...5,882,823
Ensembl chrNW_004955435:5,880,288...5,881,436
JBrowse link
G Shc1 SHC adaptor protein 1 ISO RGD PMID:17274988 RGD:1643181 NCBI chrNW_004955545:1,468,391...1,479,209
Ensembl chrNW_004955545:1,468,391...1,476,814
JBrowse link
G Smarca1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 ISO (MGI:MGI:3690152|PMID:14609955) UniProtKB PMID:14609955 MGI:MGI:3690152 NCBI chrNW_004955473:5,498,738...5,572,863
Ensembl chrNW_004955473:5,498,674...5,573,169
JBrowse link
G Snap25 synaptosome associated protein 25 ISO RGD PMID:24841827 RGD:11570515 NCBI chrNW_004955415:20,133,361...20,218,840
Ensembl chrNW_004955415:20,133,201...20,219,023
JBrowse link
G Snph syntaphilin ISO RGD PMID:12941459 RGD:2315037 NCBI chrNW_004955596:489,174...531,226
Ensembl chrNW_004955596:488,934...532,436
JBrowse link
G Sox11 SRY-box transcription factor 11 ISO (PMID:10574465) UniProtKB PMID:10574465 NCBI chrNW_004955487:2,678,961...2,680,869
Ensembl chrNW_004955487:2,679,145...2,680,521
JBrowse link
G St8sia2 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 ISO RGD PMID:8703013 RGD:27372881 NCBI chrNW_004955416:20,697,651...20,763,975
Ensembl chrNW_004955416:20,697,651...20,767,112
JBrowse link
G Tal1 TAL bHLH transcription factor 1, erythroid differentiation factor ISO (MGI:MGI:3768218|PMID:16292311) MGI PMID:16292311 MGI:MGI:3768218 NCBI chrNW_004955464:11,304,611...11,317,420
Ensembl chrNW_004955464:11,310,628...11,315,924
JBrowse link
G Tbr1 T-box brain transcription factor 1 ISO (MGI:MGI:4818701|PMID:20615956) MGI PMID:20615956 MGI:MGI:4818701 NCBI chrNW_004955449:12,293,534...12,301,440
Ensembl chrNW_004955449:12,293,601...12,301,272
JBrowse link
G Tent2 terminal nucleotidyltransferase 2 ISO RGD PMID:23933240 RGD:9684963 NCBI chrNW_004955425:21,518,154...21,576,068
Ensembl chrNW_004955425:21,517,755...21,576,068
JBrowse link
G Tlx1 T cell leukemia homeobox 1 ISO (MGI:MGI:2179900|PMID:12023301) MGI PMID:12023301 MGI:MGI:2179900 NCBI chrNW_004955485:9,070,601...9,076,063 JBrowse link
G Tlx3 T cell leukemia homeobox 3 ISO (MGI:MGI:2179900|PMID:12023301)
(MGI:MGI:5432415|PMID:22787056)
MGI PMID:12023301, PMID:22787056 MGI:MGI:2179900, MGI:MGI:5432415 NCBI chrNW_004955408:24,103,123...24,105,292
Ensembl chrNW_004955408:24,102,996...24,105,292
JBrowse link
G Trappc9 trafficking protein particle complex 9 ISO (MGI:MGI:5697973|PMID:24011459) MGI PMID:24011459 MGI:MGI:5697973 NCBI chrNW_004955461:13,498,088...14,130,159
Ensembl chrNW_004955461:13,498,671...14,124,227
JBrowse link
G Trpc5 transient receptor potential cation channel subfamily C member 5 ISO RGD PMID:21618530 RGD:7495774 NCBI chrNW_004955490:3,777,756...4,057,275
Ensembl chrNW_004955490:3,860,909...4,057,275
JBrowse link
G Trpc6 transient receptor potential cation channel subfamily C member 6 ISO RGD PMID:20479868 RGD:10044014 NCBI chrNW_004955412:4,905,039...5,019,678
Ensembl chrNW_004955412:4,906,650...4,950,525
JBrowse link
G Vhl von Hippel-Lindau tumor suppressor ISO RGD PMID:20125055 RGD:2325181 NCBI chrNW_004955561:1,573,525...1,578,295 JBrowse link
G Vxn vexin ISO (MGI:MGI:6148384|PMID:29518376) UniProtKB PMID:29518376 MGI:MGI:6148384 NCBI chrNW_004955444:12,659,894...12,684,919
Ensembl chrNW_004955444:12,659,776...12,685,055
JBrowse link
G Wnt5a Wnt family member 5A ISO RGD PMID:16909041 RGD:2317898 NCBI chrNW_004955430:5,304,817...5,325,684
Ensembl chrNW_004955430:5,304,745...5,325,684
JBrowse link
G Wnt7b Wnt family member 7B ISO (PMID:12429992) UniProtKB PMID:12429992 NCBI chrNW_004955413:30,146,185...30,185,693
Ensembl chrNW_004955413:30,144,869...30,181,791
JBrowse link
G Xrn2 5'-3' exoribonuclease 2 ISO RGD PMID:23933240 RGD:9684963 NCBI chrNW_004955415:29,107,060...29,175,374
Ensembl chrNW_004955415:29,107,034...29,175,538
JBrowse link
amacrine cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxn4 forkhead box N4 ISO (MGI:MGI:3054139|PMID:15363391) UniProtKB PMID:15363391 MGI:MGI:3054139 NCBI chrNW_004955455:9,182,405...9,210,365
Ensembl chrNW_004955455:9,183,475...9,210,506
JBrowse link
G Ikzf1 IKAROS family zinc finger 1 ISO (MGI:MGI:5629913|PMID:25654255) MGI PMID:25654255 MGI:MGI:5629913 NCBI chrNW_004955456:3,617,988...3,721,791
Ensembl chrNW_004955456:3,635,380...3,721,791
JBrowse link
G Neurod1 neuronal differentiation 1 ISO (MGI:MGI:2158684|PMID:11861467) UniProtKB PMID:11861467 MGI:MGI:2158684 NCBI chrNW_004955403:15,595,888...15,600,040
Ensembl chrNW_004955403:15,595,888...15,600,040
JBrowse link
G Neurod4 neuronal differentiation 4 ISO (MGI:MGI:2158684|PMID:11861467) UniProtKB PMID:11861467 MGI:MGI:2158684 NCBI chrNW_004955458:2,138,849...2,146,636
Ensembl chrNW_004955458:2,138,849...2,146,636
JBrowse link
G Ptf1a pancreas associated transcription factor 1a ISO (MGI:MGI:3691257|PMID:17075007) UniProtKB PMID:17075007 MGI:MGI:3691257 NCBI chrNW_004955429:5,807,804...5,809,522
Ensembl chrNW_004955429:5,808,124...5,809,522
JBrowse link
G Rorb RAR related orphan receptor B ISO (MGI:MGI:5546314|PMID:23652001) UniProtKB PMID:23652001 MGI:MGI:5546314 NCBI chrNW_004955512:4,362,287...4,541,432
Ensembl chrNW_004955512:4,362,287...4,541,445
JBrowse link
anterior commissure morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bhlhe22 basic helix-loop-helix family member e22 ISO (MGI:MGI:5315201|PMID:22284184) MGI PMID:22284184 MGI:MGI:5315201 NCBI chrNW_004955444:14,458,307...14,460,441 JBrowse link
G Fbxo45 F-box protein 45 ISO (MGI:MGI:3849342|PMID:19398581) MGI PMID:19398581 MGI:MGI:3849342 NCBI chrNW_004955420:12,714,749...12,727,600
Ensembl chrNW_004955420:12,714,608...12,726,113
JBrowse link
G Nfib nuclear factor I B ISO (MGI:MGI:4453290|PMID:19961580) UniProtKB PMID:19961580 MGI:MGI:4453290 NCBI chrNW_004955434:17,192,188...17,603,503
Ensembl chrNW_004955434:17,198,571...17,415,084
JBrowse link
G Nr2e1 nuclear receptor subfamily 2 group E member 1 ISO (MGI:MGI:2151063|PMID:11997145) MGI PMID:11997145 MGI:MGI:2151063 NCBI chrNW_004955411:33,303,765...33,325,221
Ensembl chrNW_004955411:33,303,655...33,325,376
JBrowse link
G Plxna4 plexin A4 ISO (MGI:MGI:3578029|PMID:15814794) MGI PMID:15814794 MGI:MGI:3578029 NCBI chrNW_004955410:35,281,042...35,714,094
Ensembl chrNW_004955410:35,281,648...35,713,453
JBrowse link
G Tsku tsukushi, small leucine rich proteoglycan ISO (MGI:MGI:4848234|PMID:21055390) MGI PMID:21055390 MGI:MGI:4848234 NCBI chrNW_004955414:15,166,349...15,178,284
Ensembl chrNW_004955414:15,166,349...15,178,284
JBrowse link
anterior/posterior axon guidance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dcc DCC netrin 1 receptor ISO (MGI:MGI:3807817|PMID:18479186) MGI PMID:18479186 MGI:MGI:3807817 NCBI chrNW_004955402:37,123,112...38,218,876
Ensembl chrNW_004955402:37,123,795...38,218,472
JBrowse link
G Ntn1 netrin 1 ISO (MGI:MGI:3807817|PMID:18479186) MGI PMID:18479186 MGI:MGI:3807817 NCBI chrNW_004955467:7,795,175...7,991,597
Ensembl chrNW_004955467:7,794,735...7,991,695
JBrowse link
G Unc5a unc-5 netrin receptor A ISO (MGI:MGI:3807817|PMID:18479186) MGI PMID:18479186 MGI:MGI:3807817 NCBI chrNW_004955408:29,071,812...29,132,744
Ensembl chrNW_004955408:29,071,792...29,132,037
JBrowse link
G Unc5b unc-5 netrin receptor B ISO (MGI:MGI:3807817|PMID:18479186) MGI PMID:18479186 MGI:MGI:3807817 NCBI chrNW_004955437:20,120,996...20,199,877
Ensembl chrNW_004955437:20,120,946...20,199,877
JBrowse link
G Unc5c unc-5 netrin receptor C ISO (MGI:MGI:3807817|PMID:18479186) MGI PMID:18479186 MGI:MGI:3807817 NCBI chrNW_004955405:5,791,286...6,049,952
Ensembl chrNW_004955405:5,797,590...5,950,544
JBrowse link
auditory receptor cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clrn1 clarin 1 ISO (MGI:MGI:3849925|PMID:19414487) MGI PMID:19414487 MGI:MGI:3849925 NCBI chrNW_004955448:2,062,647...2,106,548
Ensembl chrNW_004955448:2,062,647...2,106,548
JBrowse link
G Fgfr1 fibroblast growth factor receptor 1 ISO (MGI:MGI:3527944|PMID:15630379) MGI PMID:15630379 MGI:MGI:3527944 NCBI chrNW_004955463:14,013,247...14,064,354
Ensembl chrNW_004955463:14,013,247...14,064,111
JBrowse link
G Pafah1b1 platelet activating factor acetylhydrolase 1b regulatory subunit 1 ISO (MGI:MGI:5477842|PMID:23533177) CACAO PMID:23533177 MGI:MGI:5477842 NCBI chrNW_004955481:608,897...686,454
Ensembl chrNW_004955481:608,897...686,452
JBrowse link
G Pdzd7 PDZ domain containing 7 ISO (MGI:MGI:5565635|PMID:24334608) MGI PMID:24334608 MGI:MGI:5565635 NCBI chrNW_004955485:9,166,721...9,183,129
Ensembl chrNW_004955485:9,166,745...9,182,427
JBrowse link
G Slc4a7 solute carrier family 4 member 7 ISO (MGI:MGI:2680888|PMID:12808454) MGI PMID:12808454 MGI:MGI:2680888 NCBI chrNW_004955430:18,991,615...19,059,590
Ensembl chrNW_004955430:18,991,301...19,067,754
JBrowse link
G Tmc1 transmembrane channel like 1 ISO (MGI:MGI:5320864|PMID:22105175) MGI PMID:22105175 MGI:MGI:5320864 NCBI chrNW_004955434:398,734...500,378
Ensembl chrNW_004955434:398,829...529,810
JBrowse link
auditory receptor cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Jag2 jagged canonical Notch ligand 2 ISO (MGI:MGI:1332721|PMID:10080181) UniProtKB PMID:10080181 MGI:MGI:1332721 NCBI chrNW_004955538:3,421,685...3,433,829
Ensembl chrNW_004955538:3,421,685...3,433,842
JBrowse link
G Notch1 notch receptor 1 ISO (MGI:MGI:3833041|PMID:19154718) MGI PMID:19154718 MGI:MGI:3833041 NCBI chrNW_004955513:4,225,939...4,264,875
Ensembl chrNW_004955513:4,225,956...4,263,259
JBrowse link
G Rbpj recombination signal binding protein for immunoglobulin kappa J region ISO (MGI:MGI:3833041|PMID:19154718) MGI PMID:19154718 MGI:MGI:3833041 NCBI chrNW_004955443:18,783,061...19,029,441
Ensembl chrNW_004955443:18,783,061...18,910,228
JBrowse link
auditory receptor cell fate determination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atoh1 atonal bHLH transcription factor 1 ISO (MGI:MGI:3611666|PMID:16407553) MGI PMID:16407553 MGI:MGI:3611666 NCBI chrNW_004955405:4,461,704...4,462,756
Ensembl chrNW_004955405:4,461,704...4,462,756
JBrowse link
auditory receptor cell fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atoh1 atonal bHLH transcription factor 1 ISO (MGI:MGI:1339217|PMID:10364557) MGI PMID:10364557 MGI:MGI:1339217 NCBI chrNW_004955405:4,461,704...4,462,756
Ensembl chrNW_004955405:4,461,704...4,462,756
JBrowse link
auditory receptor cell morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rac1 Rac family small GTPase 1 ISO (MGI:MGI:4430014|PMID:20016102) MGI PMID:20016102 MGI:MGI:4430014 NCBI chrNW_004955460:13,270,159...13,295,562
Ensembl chrNW_004955460:13,270,159...13,311,351
JBrowse link
G Scrib scribble planar cell polarity protein ISO (MGI:MGI:4439427|PMID:20215345) MGI PMID:20215345 MGI:MGI:4439427 NCBI chrNW_004955454:2,461,526...2,482,734
Ensembl chrNW_004955454:2,461,760...2,482,098
JBrowse link
G Sec24b SEC24 homolog B, COPII coat complex component ISO (MGI:MGI:4439427|PMID:20215345) MGI PMID:20215345 MGI:MGI:4439427 NCBI chrNW_004955496:666,728...732,829
Ensembl chrNW_004955496:666,404...717,862
JBrowse link
G Slitrk6 SLIT and NTRK like family member 6 ISO (MGI:MGI:4413621|PMID:19936227) MGI PMID:19936227 MGI:MGI:4413621 NCBI chrNW_004955404:22,738,080...22,744,601
Ensembl chrNW_004955404:22,737,974...22,745,046
JBrowse link
G Wdpcp WD repeat containing planar cell polarity effector ISO (MGI:MGI:5544506|PMID:24302887) MGI PMID:24302887 MGI:MGI:5544506 NCBI chrNW_004955424:20,723,592...21,114,801 JBrowse link
auditory receptor cell stereocilium organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp2b2 ATPase plasma membrane Ca2+ transporting 2 ISO (MGI:MGI:3709803|PMID:11875276) MGI PMID:11875276 MGI:MGI:3709803 NCBI chrNW_004955561:1,727,935...1,851,907
Ensembl chrNW_004955561:1,727,935...1,851,907
JBrowse link
G Cdh23 cadherin related 23 ISO (MGI:MGI:1933915|PMID:11322776)
(MGI:MGI:75953|PMID:7610888), (MGI:MGI:81497|PMID:8790740), (MGI:MGI:86134|PMID:9039475)
(MGI:MGI:3526751|PMID:15537665)
(MGI:MGI:1929001|PMID:11138008), (MGI:MGI:3686545|PMID:17050716), (MGI:MGI:5468200|PMID:23217710)
(MGI:MGI:3625226|PMID:12121736)
MGI PMID:7610888, PMID:8790740, PMID:9039475, PMID:11138008, PMID:11322776, PMID:12121736, PMID:15537665, PMID:17050716, PMID:23217710 MGI:MGI:1929001, MGI:MGI:1933915, MGI:MGI:3526751, MGI:MGI:3625226, MGI:MGI:3686545, MGI:MGI:5468200, MGI:MGI:75953, MGI:MGI:81497, MGI:MGI:86134 NCBI chrNW_004955437:19,683,792...20,044,718
Ensembl chrNW_004955437:19,684,473...20,003,819
JBrowse link
G Clic5 chloride intracellular channel 5 ISO (MGI:MGI:3663248|PMID:17021174) MGI PMID:17021174 MGI:MGI:3663248 NCBI chrNW_004955437:11,053,885...11,118,150
Ensembl chrNW_004955437:11,053,885...11,118,255
JBrowse link
G Clrn1 clarin 1 ISO (MGI:MGI:3849925|PMID:19414487), (MGI:MGI:4353469|PMID:19423712) MGI PMID:19414487, PMID:19423712 MGI:MGI:3849925, MGI:MGI:4353469 NCBI chrNW_004955448:2,062,647...2,106,548
Ensembl chrNW_004955448:2,062,647...2,106,548
JBrowse link
G Grxcr2 glutaredoxin and cysteine rich domain containing 2 ISO (MGI:MGI:6278501|PMID:30380417) MGI PMID:30380417 MGI:MGI:6278501 NCBI chrNW_004955415:8,203,968...8,220,148
Ensembl chrNW_004955415:8,203,968...8,220,148
JBrowse link
G Lhfpl5 LHFPL tetraspan subfamily member 5 ISO (MGI:MGI:3578102|PMID:15905332)
(MGI:MGI:3759710|PMID:17876667), (MGI:MGI:5468200|PMID:23217710)
MGI PMID:15905332, PMID:17876667, PMID:23217710 MGI:MGI:3578102, MGI:MGI:3759710, MGI:MGI:5468200 NCBI chrNW_004955437:3,644,448...3,650,688 JBrowse link
G Myo3a myosin IIIA ISO (MGI:MGI:5766107|PMID:26754646) MGI PMID:26754646 MGI:MGI:5766107 NCBI chrNW_004955429:3,172,457...3,358,688
Ensembl chrNW_004955429:3,172,996...3,358,688
JBrowse link
G Myo3b myosin IIIB ISO (MGI:MGI:5766107|PMID:26754646) MGI PMID:26754646 MGI:MGI:5766107 NCBI chrNW_004955449:4,128,816...4,546,651
Ensembl chrNW_004955449:4,129,823...4,546,296
JBrowse link
G Myo7a myosin VIIA ISO (MGI:MGI:3686545|PMID:17050716)
(MGI:MGI:2156358|PMID:11753415)
(MGI:MGI:3625226|PMID:12121736)
MGI PMID:11753415, PMID:12121736, PMID:17050716 MGI:MGI:2156358, MGI:MGI:3625226, MGI:MGI:3686545 NCBI chrNW_004955414:14,576,356...14,647,500
Ensembl chrNW_004955414:14,576,356...14,647,500
JBrowse link
G Pcdh15 protocadherin related 15 ISO (MGI:MGI:3526751|PMID:15537665)
(MGI:MGI:3619110|PMID:11124469)
(MGI:MGI:3654702|PMID:16887306)
(MGI:MGI:5468200|PMID:23217710)
(MGI:MGI:1928787|PMID:10978835)
MGI PMID:10978835, PMID:11124469, PMID:15537665, PMID:16887306, PMID:23217710 MGI:MGI:1928787, MGI:MGI:3526751, MGI:MGI:3619110, MGI:MGI:3654702, MGI:MGI:5468200 NCBI chrNW_004955425:8,443,523...9,203,177
Ensembl chrNW_004955425:8,428,680...8,899,028
JBrowse link
G Pdzd7 PDZ domain containing 7 ISO (MGI:MGI:5565635|PMID:24334608) MGI PMID:24334608 MGI:MGI:5565635 NCBI chrNW_004955485:9,166,721...9,183,129
Ensembl chrNW_004955485:9,166,745...9,182,427
JBrowse link
G Pls1 plastin 1 ISO (MGI:MGI:5608770|PMID:25124451) UniProt PMID:25124451 MGI:MGI:5608770 NCBI chrNW_004955508:3,215,304...3,324,240
Ensembl chrNW_004955508:3,213,646...3,260,554
JBrowse link
G Ripor2 RHO family interacting cell polarization regulator 2 ISO (MGI:MGI:5789047|PMID:27269051) UniProtKB PMID:27269051 MGI:MGI:5789047 NCBI chrNW_004955483:2,048,236...2,257,078
Ensembl chrNW_004955483:2,048,324...2,256,589
JBrowse link
G Scrib scribble planar cell polarity protein ISO (MGI:MGI:4439427|PMID:20215345) MGI PMID:20215345 MGI:MGI:4439427 NCBI chrNW_004955454:2,461,526...2,482,734
Ensembl chrNW_004955454:2,461,760...2,482,098
JBrowse link
G Sec24b SEC24 homolog B, COPII coat complex component ISO (MGI:MGI:4439427|PMID:20215345) MGI PMID:20215345 MGI:MGI:4439427 NCBI chrNW_004955496:666,728...732,829
Ensembl chrNW_004955496:666,404...717,862
JBrowse link
G Slc9a3r1 SLC9A3 regulator 1 ISO (MGI:MGI:5578076|PMID:24920589) MGI PMID:24920589 MGI:MGI:5578076 NCBI chrNW_004955553:1,639,267...1,656,850
Ensembl chrNW_004955553:1,639,267...1,656,850
JBrowse link
G Sod1 superoxide dismutase 1 ISO (MGI:MGI:1344578|PMID:10466888), (MGI:MGI:3700629|PMID:10464373) MGI PMID:10464373, PMID:10466888 MGI:MGI:1344578, MGI:MGI:3700629 NCBI chrNW_004955407:31,261,451...31,267,657
Ensembl chrNW_004955407:31,263,863...31,267,727
JBrowse link
G Strc stereocilin ISO (MGI:MGI:5430850|PMID:21165971)
(MGI:MGI:3818235|PMID:18849963)
UniProtKB
MGI
PMID:18849963, PMID:21165971 MGI:MGI:3818235, MGI:MGI:5430850 NCBI chrNW_004955416:10,139,420...10,141,906 JBrowse link
G Tprn taperin ISO (MGI:MGI:6278501|PMID:30380417) MGI PMID:30380417 MGI:MGI:6278501 NCBI chrNW_004955513:5,196,871...5,205,945
Ensembl chrNW_004955513:5,197,280...5,203,445
JBrowse link
G Whrn whirlin ISO (MGI:MGI:5796227|PMID:27117407) MGI PMID:27117407 MGI:MGI:5796227 NCBI chrNW_004955419:13,116,001...13,207,266
Ensembl chrNW_004955419:13,116,001...13,207,266
JBrowse link
axon choice point recognition term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Efnb3 ephrin B3 ISO (MGI:MGI:3026699|PMID:11182083) MGI PMID:11182083 MGI:MGI:3026699 NCBI chrNW_004955467:9,217,796...9,225,223
Ensembl chrNW_004955467:9,217,796...9,224,940
JBrowse link
G Gap43 growth associated protein 43 ISO (MGI:MGI:70834|PMID:7859286) MGI PMID:7859286 MGI:MGI:70834 NCBI chrNW_004955427:15,696,549...15,791,279
Ensembl chrNW_004955427:15,695,963...15,791,327
JBrowse link
axon development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Camsap2 calmodulin regulated spectrin associated protein family member 2 ISO PMID:24908486
(PMID:24908486)
UniProt
UniProtKB
PMID:24908486 RGD:13441206 NCBI chrNW_004955406:36,958,337...37,055,748
Ensembl chrNW_004955406:36,957,523...37,055,748
JBrowse link
G Ddr1 discoidin domain receptor tyrosine kinase 1 ISO (MGI:MGI:1889152|PMID:10970885) MGI PMID:10970885 MGI:MGI:1889152 NCBI chrNW_004955583:820,893...838,515
Ensembl chrNW_004955583:820,931...841,654
JBrowse link
G Dynlt1 dynein light chain Tctex-type 1 ISO RGD PMID:15992542 RGD:8553295 NCBI chrNW_004955439:3,833,525...3,842,393
Ensembl chrNW_004955439:3,833,525...3,842,393
JBrowse link
G L1cam L1 cell adhesion molecule ISO (PMID:20621658) UniProtKB PMID:20621658 NCBI chrNW_004955580:548,442...561,580
Ensembl chrNW_004955580:549,368...561,486
JBrowse link
G Mapk8ip3 mitogen-activated protein kinase 8 interacting protein 3 ISO (MGI:MGI:5502974|PMID:23576431), (MGI:MGI:6162406|PMID:25944905) UniProtKB
UniProt
PMID:23576431, PMID:25944905 MGI:MGI:5502974, MGI:MGI:6162406, RGD:13673742, RGD:13673780 NCBI chrNW_004955442:15,498,909...15,545,298
Ensembl chrNW_004955442:15,498,909...15,545,298
JBrowse link
G Mark2 microtubule affinity regulating kinase 2 ISO PMID:16717194 ARUK-UCL PMID:16717194 RGD:13602002 NCBI chrNW_004955422:21,112,162...21,176,506
Ensembl chrNW_004955422:21,109,940...21,176,500
JBrowse link
G Nefh neurofilament heavy ISO (PMID:7536898)
(MGI:MGI:2183394|PMID:9763431)
BHF-UCL PMID:7536898, PMID:9763431 MGI:MGI:2183394 NCBI chrNW_004955455:3,735,330...3,744,714
Ensembl chrNW_004955455:3,735,410...3,744,107
JBrowse link
G Plp1 proteolipid protein 1 ISO (MGI:MGI:5511081|PMID:24038504) MGI PMID:24038504 MGI:MGI:5511081 NCBI chrNW_004955548:781,522...797,246
Ensembl chrNW_004955548:781,015...797,935
JBrowse link
G Pmp22 peripheral myelin protein 22 ISO (MGI:MGI:4436804|PMID:20071523) MGI PMID:20071523 MGI:MGI:4436804 NCBI chrNW_004955467:2,422,181...2,456,925
Ensembl chrNW_004955467:2,423,659...2,457,307
JBrowse link
G Svbp small vasohibin binding protein ISO (MGI:MGI:6383353|PMID:31324789)
(PMID:31324789)
UniProt PMID:31324789 MGI:MGI:6383353 NCBI chrNW_004955537:2,333,657...2,337,012
Ensembl chrNW_004955537:2,333,657...2,337,037
JBrowse link
G Tbc1d24 TBC1 domain family member 24 ISO (MGI:MGI:6279048|PMID:30335140) MGI PMID:30335140 MGI:MGI:6279048 NCBI chrNW_004955442:14,816,213...14,823,132 JBrowse link
G Trim32 tripartite motif containing 32 ISO (MGI:MGI:3836840|PMID:19155210) MGI PMID:19155210 MGI:MGI:3836840 NCBI chrNW_004955419:11,151,751...11,168,046
Ensembl chrNW_004955419:11,151,751...11,168,041
JBrowse link
G Tspan2 tetraspanin 2 ISO (MGI:MGI:5511081|PMID:24038504) MGI PMID:24038504 MGI:MGI:5511081 NCBI chrNW_004955435:18,344,320...18,371,248
Ensembl chrNW_004955435:18,344,320...18,372,534
JBrowse link
G Vash2 vasohibin 2 ISO (PMID:31324789) UniProt PMID:31324789 NCBI chrNW_004955406:4,607,924...4,639,949
Ensembl chrNW_004955406:4,607,924...4,640,002
JBrowse link
G Zpr1 ZPR1 zinc finger ISO (MGI:MGI:3575865|PMID:15767679), (MGI:MGI:3629480|PMID:16648254), (MGI:MGI:5424069|PMID:22422766)
(PMID:22422766)
UniProtKB PMID:15767679, PMID:16648254, PMID:22422766 MGI:MGI:3575865, MGI:MGI:3629480, MGI:MGI:5424069 NCBI chrNW_004955412:18,117,957...18,127,552
Ensembl chrNW_004955412:18,116,531...18,127,552
JBrowse link
axon extension term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Auts2 activator of transcription and developmental regulator AUTS2 ISO (MGI:MGI:5908783|PMID:25533347) UniProtKB PMID:25533347 MGI:MGI:5908783 NCBI chrNW_004955456:10,294,525...11,417,761 JBrowse link
G Bdnf brain derived neurotrophic factor ISO (MGI:MGI:5515840|PMID:24035762) MGI PMID:24035762 MGI:MGI:5515840 NCBI chrNW_004955476:6,773,244...6,822,201
Ensembl chrNW_004955476:6,772,088...6,822,588
JBrowse link
G C9orf72 C9orf72-SMCR8 complex subunit ISO (PMID:27723745)
(MGI:MGI:5818605|PMID:27723745)
UniProtKB PMID:27723745 MGI:MGI:5818605 NCBI chrNW_004955472:7,299,092...7,337,591
Ensembl chrNW_004955472:7,310,788...7,337,735
JBrowse link
G Dclk1 doublecortin like kinase 1 ISO (MGI:MGI:3614628|PMID:16387638) MGI PMID:16387638 MGI:MGI:3614628 NCBI chrNW_004955431:9,975,629...10,302,605
Ensembl chrNW_004955431:9,975,262...10,297,010
JBrowse link
G Dcx doublecortin ISO (MGI:MGI:3614628|PMID:16387638) MGI PMID:16387638 MGI:MGI:3614628 NCBI chrNW_004955490:4,354,307...4,469,055
Ensembl chrNW_004955490:4,354,307...4,469,055
JBrowse link
G Dvl1 dishevelled segment polarity protein 1 ISO (MGI:MGI:3806438|PMID:18716223) MGI PMID:18716223 MGI:MGI:3806438 NCBI chrNW_004955486:9,464,390...9,469,984
Ensembl chrNW_004955486:9,464,313...9,469,984
JBrowse link
G Hsp90aa1 heat shock protein 90 alpha family class A member 1 ISO (MGI:MGI:6148478|PMID:24286867) ARUK-UCL PMID:24286867 MGI:MGI:6148478 NCBI chrNW_004955538:1,469,544...1,475,010 JBrowse link
G Hsp90ab1 heat shock protein 90 alpha family class B member 1 ISO (MGI:MGI:6148478|PMID:24286867) ARUK-UCL PMID:24286867 MGI:MGI:6148478 NCBI chrNW_004955437:9,872,649...9,878,459
Ensembl chrNW_004955437:9,873,908...9,878,459
JBrowse link
G Itgb1 integrin subunit beta 1 ISO (MGI:MGI:2683853|PMID:12879062) MGI PMID:12879062 MGI:MGI:2683853 NCBI chrNW_004955462:4,454,809...4,483,227
Ensembl chrNW_004955462:4,454,809...4,484,842
JBrowse link
G Lhx2 LIM homeobox 2 ISO (MGI:MGI:5303045|PMID:21857657) MGI PMID:21857657 MGI:MGI:5303045 NCBI chrNW_004955419:3,999,364...4,019,543
Ensembl chrNW_004955419:3,998,242...4,018,875
JBrowse link
G Map1b microtubule associated protein 1B ISO (MGI:MGI:3694279|PMID:16536727) MGI PMID:16536727 MGI:MGI:3694279 NCBI chrNW_004955575:914,607...1,020,971
Ensembl chrNW_004955575:913,723...1,021,028
JBrowse link
G Mapt microtubule associated protein tau ISO (MGI:MGI:3614337|PMID:11891784)
(MGI:MGI:3694279|PMID:16536727), (MGI:MGI:4454362|PMID:20338169)
MGI PMID:11891784, PMID:16536727, PMID:20338169 MGI:MGI:3614337, MGI:MGI:3694279, MGI:MGI:4454362 NCBI chrNW_004955478:10,222,439...10,271,439
Ensembl chrNW_004955478:10,225,823...10,271,442
JBrowse link
G Ndn necdin, MAGE family member ISO (MGI:MGI:3582873|PMID:15972963) MGI PMID:15972963 MGI:MGI:3582873 NCBI chrNW_004955416:31,125,354...31,127,010
Ensembl chrNW_004955416:31,125,924...31,126,889
JBrowse link
G Nlgn3 neuroligin 3 ISO PMID:19406211 BHF-UCL PMID:19406211 RGD:8554851 NCBI chrNW_004955475:10,712,170...10,735,857
Ensembl chrNW_004955475:10,712,170...10,735,857
JBrowse link
G Pou4f2 POU class 4 homeobox 2 ISO (MGI:MGI:2156641|PMID:11807038) MGI PMID:11807038 MGI:MGI:2156641 NCBI chrNW_004955428:2,325,775...2,329,122
Ensembl chrNW_004955428:2,324,834...2,329,205
JBrowse link
G Pou4f3 POU class 4 homeobox 3 ISO (MGI:MGI:2156641|PMID:11807038) MGI PMID:11807038 MGI:MGI:2156641 NCBI chrNW_004955415:7,777,296...7,778,622
Ensembl chrNW_004955415:7,777,114...7,778,622
JBrowse link
G Raph1 Ras association (RalGDS/AF-6) and pleckstrin homology domains 1 ISO (MGI:MGI:4462113|PMID:20417104) MGI PMID:20417104 MGI:MGI:4462113 NCBI chrNW_004955457:11,394,572...11,462,617 JBrowse link
G Sema5a semaphorin 5A ISO (MGI:MGI:5140622|PMID:21835343) MGI PMID:21835343 MGI:MGI:5140622 NCBI chrNW_004955504:6,343,747...6,691,945
Ensembl chrNW_004955504:6,350,866...6,762,104
JBrowse link
G Sema5b semaphorin 5B ISO (MGI:MGI:5140622|PMID:21835343) MGI PMID:21835343 MGI:MGI:5140622 NCBI chrNW_004955427:22,109,946...22,219,497
Ensembl chrNW_004955427:22,109,607...22,180,602
JBrowse link
G Sema7a semaphorin 7A (John Milton Hagen blood group) ISO (MGI:MGI:2683853|PMID:12879062) MGI PMID:12879062 MGI:MGI:2683853 NCBI chrNW_004955450:3,401,732...3,424,547
Ensembl chrNW_004955450:3,401,777...3,423,363
JBrowse link
G Slc9a6 solute carrier family 9 member A6 ISO (PMID:24035762) MGI PMID:24035762 NCBI chrNW_004955489:9,020,719...9,078,375
Ensembl chrNW_004955489:9,019,425...9,078,705
JBrowse link
G Spg11 SPG11 vesicle trafficking associated, spatacsin ISO (MGI:MGI:5585364|PMID:24794856) MGI PMID:24794856 MGI:MGI:5585364 NCBI chrNW_004955416:11,084,448...11,168,478
Ensembl chrNW_004955416:11,086,176...11,168,332
JBrowse link
G Ulk1 unc-51 like autophagy activating kinase 1 ISO (MGI:MGI:3706258|PMID:17389358) MGI PMID:17389358 MGI:MGI:3706258 NCBI chrNW_004955482:760,200...777,133
Ensembl chrNW_004955482:761,811...777,133
JBrowse link
G Ulk2 unc-51 like autophagy activating kinase 2 ISO (MGI:MGI:3706258|PMID:17389358) MGI PMID:17389358 MGI:MGI:3706258 NCBI chrNW_004955467:818,975...894,103
Ensembl chrNW_004955467:818,076...894,106
JBrowse link
G Usp9x ubiquitin specific peptidase 9 X-linked ISO (PMID:24607389)
(MGI:MGI:5532214|PMID:23861879)
(MGI:MGI:5574428|PMID:24607389)
UniProtKB
MGI
PMID:23861879, PMID:24607389 MGI:MGI:5532214, MGI:MGI:5574428 NCBI chrNW_004955565:1,479,040...1,602,070
Ensembl chrNW_004955565:1,479,040...1,602,070
JBrowse link
G Vcl vinculin ISO (MGI:MGI:5568171|PMID:24623780) MGI PMID:24623780 MGI:MGI:5568171 NCBI chrNW_004955437:17,812,998...17,920,253
Ensembl chrNW_004955437:17,813,007...17,920,253
JBrowse link
axon extension involved in axon guidance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nrp1 neuropilin 1 ISO (MGI:MGI:5437554|PMID:22790009) BHF-UCL PMID:22790009 MGI:MGI:5437554 NCBI chrNW_004955462:4,101,997...4,241,012
Ensembl chrNW_004955462:4,101,999...4,241,012
JBrowse link
G Nrp2 neuropilin 2 ISO (MGI:MGI:5437554|PMID:22790009) BHF-UCL PMID:22790009 MGI:MGI:5437554 NCBI chrNW_004955457:9,197,621...9,316,789
Ensembl chrNW_004955457:9,197,405...9,316,787
JBrowse link
G Sema3a semaphorin 3A ISO (MGI:MGI:5437554|PMID:22790009) BHF-UCL PMID:22790009 MGI:MGI:5437554 NCBI chrNW_004955410:2,146,088...2,344,342
Ensembl chrNW_004955410:2,144,388...2,338,973
JBrowse link
G Sema3f semaphorin 3F ISO (MGI:MGI:5437554|PMID:22790009) BHF-UCL PMID:22790009 MGI:MGI:5437554 NCBI chrNW_004955532:1,992,417...2,015,879
Ensembl chrNW_004955532:1,988,486...2,017,170
JBrowse link
G Slit1 slit guidance ligand 1 ISO (PMID:16840550) UniProtKB PMID:16840550 NCBI chrNW_004955507:3,204,135...3,365,319
Ensembl chrNW_004955507:3,201,556...3,365,471
JBrowse link
G Slit2 slit guidance ligand 2 ISO (PMID:16840550) UniProtKB PMID:16840550 NCBI chrNW_004955480:3,982,977...4,314,160
Ensembl chrNW_004955480:3,984,586...4,313,908
JBrowse link
G Slit3 slit guidance ligand 3 ISO (PMID:16840550) UniProtKB PMID:16840550 NCBI chrNW_004955408:21,719,487...22,322,958
Ensembl chrNW_004955408:21,722,632...22,322,917
JBrowse link
G Smo smoothened, frizzled class receptor ISO RGD PMID:19447091 RGD:2324988 NCBI chrNW_004955479:9,963,377...9,991,670
Ensembl chrNW_004955479:9,964,170...9,993,165
JBrowse link
axon extension involved in regeneration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lamb2 laminin subunit beta 2 ISO (MGI:MGI:1101275|PMID:9396756) MGI PMID:9396756 MGI:MGI:1101275 NCBI chrNW_004955532:1,115,412...1,127,264
Ensembl chrNW_004955532:1,115,087...1,127,455
JBrowse link
axon guidance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ablim1 actin binding LIM protein 1 ISO (MGI:MGI:1928568|PMID:11163266) MGI PMID:11163266 MGI:MGI:1928568 NCBI chrNW_004955431:19,397,136...19,684,574
Ensembl chrNW_004955431:19,402,023...19,683,589
JBrowse link
G Alcam activated leukocyte cell adhesion molecule ISO (MGI:MGI:3056232|PMID:15345243) MGI PMID:15345243 MGI:MGI:3056232 NCBI chrNW_004955427:6,494,657...6,544,668
Ensembl chrNW_004955427:6,494,124...6,545,963
JBrowse link
G Ank3 ankyrin 3 ISO (MGI:MGI:3510083|PMID:15479642) MGI PMID:15479642 MGI:MGI:3510083 NCBI chrNW_004955425:13,522,233...13,851,286 JBrowse link
G Apbb1 amyloid beta precursor protein binding family B member 1 ISO (MGI:MGI:3614238|PMID:16407979) MGI PMID:16407979 MGI:MGI:3614238 NCBI chrNW_004955414:22,121,867...22,137,849
Ensembl chrNW_004955414:22,117,470...22,137,849
JBrowse link
G Apbb2 amyloid beta precursor protein binding family B member 2 ISO (MGI:MGI:3614238|PMID:16407979) MGI PMID:16407979 MGI:MGI:3614238 NCBI chrNW_004955443:6,513,762...6,786,247
Ensembl chrNW_004955443:6,513,980...6,783,014
JBrowse link
G Arhgap35 Rho GTPase activating protein 35 ISO (MGI:MGI:1933687|PMID:11283609) UniProtKB PMID:11283609 MGI:MGI:1933687 NCBI chrNW_004955574:915,604...984,744
Ensembl chrNW_004955574:915,325...984,744
JBrowse link
G Artn artemin ISO (MGI:MGI:2183092|PMID:12160745) MGI PMID:12160745 MGI:MGI:2183092 NCBI chrNW_004955537:3,460,176...3,464,335
Ensembl chrNW_004955537:3,460,176...3,464,335
JBrowse link
G Arx aristaless related homeobox ISO (MGI:MGI:3574008|PMID:15677725)
(MGI:MGI:3709215|PMID:17460091)
MGI PMID:15677725, PMID:17460091 MGI:MGI:3574008, MGI:MGI:3709215 NCBI chrNW_004955509:5,326,145...5,338,250 JBrowse link
G Atoh1 atonal bHLH transcription factor 1 ISO (MGI:MGI:3607238|PMID:16145671) MGI PMID:16145671 MGI:MGI:3607238 NCBI chrNW_004955405:4,461,704...4,462,756
Ensembl chrNW_004955405:4,461,704...4,462,756
JBrowse link
G B3gnt2 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2 ISO (MGI:MGI:3575344|PMID:15728829), (MGI:MGI:5528450|PMID:23006775) MGI PMID:15728829, PMID:23006775 MGI:MGI:3575344, MGI:MGI:5528450 NCBI chrNW_004955424:21,859,901...21,888,722
Ensembl chrNW_004955424:21,859,901...21,888,722
JBrowse link
G B4gat1 beta-1,4-glucuronyltransferase 1 ISO (MGI:MGI:5470500|PMID:23217742) MGI PMID:23217742 MGI:MGI:5470500 NCBI chrNW_004955422:18,979,545...18,981,889
Ensembl chrNW_004955422:18,979,545...18,981,889
JBrowse link
G Bdnf brain derived neurotrophic factor ISO (MGI:MGI:3629534|PMID:15014133) MGI PMID:15014133 MGI:MGI:3629534 NCBI chrNW_004955476:6,773,244...6,822,201
Ensembl chrNW_004955476:6,772,088...6,822,588
JBrowse link
G Bmp7 bone morphogenetic protein 7 ISO (MGI:MGI:2662055|PMID:12741987) MGI PMID:12741987 MGI:MGI:2662055 NCBI chrNW_004955445:2,154,057...2,235,594
Ensembl chrNW_004955445:2,153,170...2,235,795
JBrowse link
G Boc BOC cell adhesion associated, oncogene regulated ISO (MGI:MGI:3691957|PMID:17086203) MGI PMID:17086203 MGI:MGI:3691957 NCBI chrNW_004955427:13,424,478...13,492,527
Ensembl chrNW_004955427:13,424,478...13,493,952
JBrowse link
G Cdh4 cadherin 4 ISO (MGI:MGI:2679739|PMID:14586016) MGI PMID:14586016 MGI:MGI:2679739 NCBI chrNW_004955528:2,040,373...2,594,602
Ensembl chrNW_004955528:2,043,648...2,220,640
JBrowse link
G Cdk5r1 cyclin dependent kinase 5 regulatory subunit 1 ISO (MGI:MGI:1347398|PMID:10545161) UniProtKB PMID:10545161 MGI:MGI:1347398 NCBI chrNW_004955481:7,408,089...7,411,813
Ensembl chrNW_004955481:7,408,205...7,409,128
JBrowse link
G Chl1 cell adhesion molecule L1 like ISO (MGI:MGI:2389546|PMID:12391163) MGI PMID:12391163 MGI:MGI:2389546 NCBI chrNW_004955421:12,763,432...12,957,852
Ensembl chrNW_004955421:12,763,287...12,958,065
JBrowse link
G Cntn2 contactin 2 ISO (MGI:MGI:3801368|PMID:18550718) MGI PMID:18550718 MGI:MGI:3801368 NCBI chrNW_004955406:40,831,897...40,862,445
Ensembl chrNW_004955406:40,831,850...40,858,569
JBrowse link
G Crppa CDP-L-ribitol pyrophosphorylase A ISO (MGI:MGI:5470500|PMID:23217742) MGI PMID:23217742 MGI:MGI:5470500 NCBI chrNW_004955410:19,359,495...19,614,283
Ensembl chrNW_004955410:19,359,868...19,614,344
JBrowse link
G Csf1r colony stimulating factor 1 receptor ISO (MGI:MGI:5430247|PMID:22542597) ParkinsonsUK-UCL PMID:22542597 MGI:MGI:5430247 NCBI chrNW_004955415:4,434,486...4,462,505
Ensembl chrNW_004955415:4,434,453...4,461,751
JBrowse link
G Dcc DCC netrin 1 receptor ISO RGD PMID:8861902 RGD:729062 NCBI chrNW_004955402:37,123,112...38,218,876
Ensembl chrNW_004955402:37,123,795...38,218,472
JBrowse link
G Dlx5 distal-less homeobox 5 ISO (MGI:MGI:3722740|PMID:17804636) MGI PMID:17804636 MGI:MGI:3722740 NCBI chrNW_004955432:13,429,832...13,434,160
Ensembl chrNW_004955432:13,429,415...13,434,258
JBrowse link
G Draxin dorsal inhibitory axon guidance protein ISO (MGI:MGI:3832346|PMID:19150847) UniProtKB PMID:19150847 MGI:MGI:3832346 NCBI chrNW_004955486:2,161,927...2,185,230
Ensembl chrNW_004955486:2,161,913...2,174,013
JBrowse link
G Drgx dorsal root ganglia homeobox ISO (MGI:MGI:2670488|PMID:12917357) MGI PMID:12917357 MGI:MGI:2670488 NCBI chrNW_004955556:842,714...870,248
Ensembl chrNW_004955556:842,714...870,248
JBrowse link
G Dscam DS cell adhesion molecule ISO (MGI:MGI:6274971|PMID:22685302) UniProt PMID:22685302 MGI:MGI:6274971 NCBI chrNW_004955407:39,985,501...40,473,330
Ensembl chrNW_004955407:39,986,108...40,473,200
JBrowse link
G Dvl1 dishevelled segment polarity protein 1 ISO (MGI:MGI:3806438|PMID:18716223) MGI PMID:18716223 MGI:MGI:3806438 NCBI chrNW_004955486:9,464,390...9,469,984
Ensembl chrNW_004955486:9,464,313...9,469,984
JBrowse link
G Efna2 ephrin A2 ISO RGD PMID:17328773 RGD:2301727 NCBI chrNW_004955495:6,614,828...6,627,287
Ensembl chrNW_004955495:6,614,791...6,627,287
JBrowse link
G Efna5 ephrin A5 ISO (MGI:MGI:1261388|PMID:9614241)
(MGI:MGI:1931133|PMID:11222144)
MGI PMID:9614241, PMID:11222144 MGI:MGI:1261388, MGI:MGI:1931133 NCBI chrNW_004955418:6,919,270...7,188,561
Ensembl chrNW_004955418:6,920,919...7,185,478
JBrowse link
G Efnb1 ephrin B1 ISO (MGI:MGI:2153438|PMID:11731465) MGI PMID:11731465 MGI:MGI:2153438 NCBI chrNW_004955475:8,360,504...8,372,431
Ensembl chrNW_004955475:8,360,465...8,373,578
JBrowse link
G Efnb3 ephrin B3 ISO (MGI:MGI:2153438|PMID:11731465)
(MGI:MGI:2653388|PMID:12649481)
MGI PMID:11731465, PMID:12649481 MGI:MGI:2153438, MGI:MGI:2653388 NCBI chrNW_004955467:9,217,796...9,225,223
Ensembl chrNW_004955467:9,217,796...9,224,940
JBrowse link
G Enah ENAH actin regulator ISO (MGI:MGI:1331576|PMID:10069337), (MGI:MGI:3054149|PMID:15371503)
(MGI:MGI:3054149|PMID:15371503)
MGI PMID:10069337, PMID:15371503 MGI:MGI:1331576, MGI:MGI:3054149 NCBI chrNW_004955520:310,482...374,800
Ensembl chrNW_004955520:308,070...371,922
JBrowse link
G Epha4 EPH receptor A4 ISO (MGI:MGI:5464968|PMID:23144223)
(MGI:MGI:2653388|PMID:12649481)
MGI PMID:12649481, PMID:23144223 MGI:MGI:2653388, MGI:MGI:5464968 NCBI chrNW_004955453:12,099,800...12,240,199
Ensembl chrNW_004955453:12,099,757...12,240,199
JBrowse link
G Epha5 EPH receptor A5 ISO (MGI:MGI:2384261|PMID:12124402) UniProtKB PMID:12124402 MGI:MGI:2384261 NCBI chrNW_004955447:7,066,111...7,382,046
Ensembl chrNW_004955447:7,066,111...7,382,046
JBrowse link
G Epha8 EPH receptor A8 ISO (MGI:MGI:892883|PMID:9214628) UniProtKB PMID:9214628 MGI:MGI:892883 NCBI chrNW_004955452:2,702,277...2,729,161
Ensembl chrNW_004955452:2,701,803...2,729,277
JBrowse link
G Ephb1 EPH receptor B1 ISO (MGI:MGI:2149059|PMID:11532925)
(MGI:MGI:2675767|PMID:12971893)
(MGI:MGI:3716012|PMID:16701205)
(MGI:MGI:5604297|PMID:24997765)
MGI PMID:11532925, PMID:12971893, PMID:16701205, PMID:24997765 MGI:MGI:2149059, MGI:MGI:2675767, MGI:MGI:3716012, MGI:MGI:5604297 NCBI chrNW_004955501:3,424,112...3,821,727
Ensembl chrNW_004955501:3,423,977...3,821,890
JBrowse link
G Ephb2 EPH receptor B2 ISO (MGI:MGI:1859095|PMID:10839360), (MGI:MGI:84499|PMID:8947026)
(MGI:MGI:2149059|PMID:11532925)
UniProtKB
MGI
PMID:8947026, PMID:10839360, PMID:11532925 MGI:MGI:1859095, MGI:MGI:2149059, MGI:MGI:84499 NCBI chrNW_004955452:2,844,713...2,986,790
Ensembl chrNW_004955452:2,844,713...2,980,445
JBrowse link
G Ephb3 EPH receptor B3 ISO (MGI:MGI:2149059|PMID:11532925)
(MGI:MGI:1859095|PMID:10839360), (MGI:MGI:84499|PMID:8947026)
MGI
UniProtKB
PMID:8947026, PMID:10839360, PMID:11532925 MGI:MGI:1859095, MGI:MGI:2149059, MGI:MGI:84499 NCBI chrNW_004955420:22,900,588...22,919,924
Ensembl chrNW_004955420:22,901,337...22,920,712
JBrowse link
G Etv1 ETS variant transcription factor 1 ISO (MGI:MGI:2183841|PMID:10850491) MGI PMID:10850491 MGI:MGI:2183841 NCBI chrNW_004955410:17,445,496...17,535,856
Ensembl chrNW_004955410:17,445,496...17,535,856
JBrowse link
G Ext1 exostosin glycosyltransferase 1 ISO (MGI:MGI:2679928|PMID:14605369)
(MGI:MGI:2679928|PMID:14605369), (MGI:MGI:5311271|PMID:21743013)
MGI PMID:14605369, PMID:21743013 MGI:MGI:2679928, MGI:MGI:5311271 NCBI chrNW_004955417:23,798,044...24,067,759
Ensembl chrNW_004955417:23,798,393...24,067,100
JBrowse link
G Fezf1 FEZ family zinc finger 1 ISO (MGI:MGI:3621093|PMID:16540508) MGI PMID:16540508 MGI:MGI:3621093 NCBI chrNW_004955479:3,945,358...3,953,924
Ensembl chrNW_004955479:3,945,292...3,951,847
JBrowse link
G Flrt2 fibronectin leucine rich transmembrane protein 2 ISO (MGI:MGI:5486433|PMID:21673655) MGI PMID:21673655 MGI:MGI:5486433 NCBI chrNW_004955438:8,565,319...8,656,195
Ensembl chrNW_004955438:8,565,319...8,656,186
JBrowse link
G Flrt3 fibronectin leucine rich transmembrane protein 3 ISO (MGI:MGI:5688822|PMID:24560577)
PMID:21673655
UniProtKB
MGI
PMID:21673655, PMID:24560577 MGI:MGI:5688822, RGD:8554719 NCBI chrNW_004955415:23,669,749...23,683,235
Ensembl chrNW_004955415:23,669,749...23,683,235
JBrowse link
G Foxd1 forkhead box D1 ISO (MGI:MGI:3512698|PMID:15509772) MGI PMID:15509772 MGI:MGI:3512698 NCBI chrNW_004955425:27,158,601...27,159,447 JBrowse link
G Gap43 growth associated protein 43 ISO (MGI:MGI:1353240|PMID:10662636) MGI PMID:10662636 MGI:MGI:1353240 NCBI chrNW_004955427:15,696,549...15,791,279
Ensembl chrNW_004955427:15,695,963...15,791,327
JBrowse link
G Gas1 growth arrest specific 1 ISO (MGI:MGI:3710451|PMID:17504941) MGI PMID:17504941 MGI:MGI:3710451 NCBI chrNW_004955432:727,784...729,096 JBrowse link
G Gata3 GATA binding protein 3 ISO (MGI:MGI:1928163|PMID:11135239) MGI PMID:11135239 MGI:MGI:1928163 NCBI chrNW_004955421:24,448,446...24,477,885
Ensembl chrNW_004955421:24,457,496...24,478,744
JBrowse link
G Gbx2 gastrulation brain homeobox 2 ISO (MGI:MGI:2179161|PMID:11967891) MGI PMID:11967891 MGI:MGI:2179161 NCBI chrNW_004955453:538,066...541,415
Ensembl chrNW_004955453:538,280...540,306
JBrowse link
G Gdf7 growth differentiation factor 7 ISO (MGI:MGI:2662801|PMID:12639970) MGI PMID:12639970 MGI:MGI:2662801 NCBI chrNW_004955469:3,134,355...3,149,177 JBrowse link
G Gfra3 GDNF family receptor alpha 3 ISO (MGI:MGI:1344239|PMID:10482239)
(MGI:MGI:2183092|PMID:12160745)
MGI PMID:10482239, PMID:12160745 MGI:MGI:1344239, MGI:MGI:2183092 NCBI chrNW_004955418:2,152,887...2,162,883
Ensembl chrNW_004955418:2,143,169...2,163,286
JBrowse link
G Gli2 GLI family zinc finger 2 ISO (MGI:MGI:1340208|PMID:10409510) MGI PMID:10409510 MGI:MGI:1340208 NCBI chrNW_004955459:8,892,917...9,124,672
Ensembl chrNW_004955459:8,892,869...9,118,499
JBrowse link
G Gli3 GLI family zinc finger 3 ISO (MGI:MGI:4837563|PMID:20943929)
(MGI:MGI:3628676|PMID:15065125)
MGI PMID:15065125, PMID:20943929 MGI:MGI:3628676, MGI:MGI:4837563 NCBI chrNW_004955460:1,528,457...1,805,584
Ensembl chrNW_004955460:1,528,412...1,805,918
JBrowse link
G Klf7 Kruppel like factor 7 ISO (MGI:MGI:3581378|PMID:15964824) MGI PMID:15964824 MGI:MGI:3581378 NCBI chrNW_004955457:7,833,711...7,918,754
Ensembl chrNW_004955457:7,833,218...7,918,754
JBrowse link
G L1cam L1 cell adhesion molecule ISO (MGI:MGI:3804601|PMID:18650339)
(MGI:MGI:3801368|PMID:18550718)
(MGI:MGI:2449891|PMID:12533613), (MGI:MGI:3801368|PMID:18550718)
(PMID:24155914)
MGI
UniProtKB
PMID:12533613, PMID:18550718, PMID:18650339, PMID:24155914 MGI:MGI:2449891, MGI:MGI:3801368, MGI:MGI:3804601 NCBI chrNW_004955580:548,442...561,580
Ensembl chrNW_004955580:549,368...561,486
JBrowse link
G Lama2 laminin subunit alpha 2 ISO (MGI:MGI:3850905|PMID:19295126) MGI PMID:19295126 MGI:MGI:3850905 NCBI chrNW_004955436:9,829,777...10,400,101
Ensembl chrNW_004955436:9,830,030...10,399,891
JBrowse link
G Lamb2 laminin subunit beta 2 ISO (MGI:MGI:3850905|PMID:19295126) MGI PMID:19295126 MGI:MGI:3850905 NCBI chrNW_004955532:1,115,412...1,127,264
Ensembl chrNW_004955532:1,115,087...1,127,455
JBrowse link
G Lgi1 leucine rich glioma inactivated 1 ISO (PMID:20463223) DFLAT PMID:20463223 NCBI chrNW_004955507:268,032...304,949
Ensembl chrNW_004955507:267,892...305,026
JBrowse link
G Lhx2 LIM homeobox 2 ISO (MGI:MGI:5319439|PMID:22457488)
(MGI:MGI:3714686|PMID:17493606)
CACAO
MGI
PMID:17493606, PMID:22457488 MGI:MGI:3714686, MGI:MGI:5319439 NCBI chrNW_004955419:3,999,364...4,019,543
Ensembl chrNW_004955419:3,998,242...4,018,875
JBrowse link
G Lmx1a LIM homeobox transcription factor 1 alpha ISO (MGI:MGI:3051929|PMID:15183721) MGI PMID:15183721 MGI:MGI:3051929 NCBI chrNW_004955462:11,328,583...11,484,438
Ensembl chrNW_004955462:11,329,676...11,477,770
JBrowse link
G Mapk8ip3 mitogen-activated protein kinase 8 interacting protein 3 ISO (MGI:MGI:3527288|PMID:15572149) MGI PMID:15572149 MGI:MGI:3527288 NCBI chrNW_004955442:15,498,909...15,545,298
Ensembl chrNW_004955442:15,498,909...15,545,298
JBrowse link
G Matn2 matrilin 2 ISO (MGI:MGI:3850905|PMID:19295126) MGI PMID:19295126 MGI:MGI:3850905 NCBI chrNW_004955417:13,646,379...13,760,050
Ensembl chrNW_004955417:13,646,405...13,759,520
JBrowse link
G Myh10 myosin heavy chain 10 ISO (MGI:MGI:3581503|PMID:15880105) MGI PMID:15880105 MGI:MGI:3581503 NCBI chrNW_004955467:8,298,514...8,427,459
Ensembl chrNW_004955467:8,298,527...8,427,459
JBrowse link
G Nectin1 nectin cell adhesion molecule 1 ISO RGD PMID:15328010 RGD:1599806 NCBI chrNW_004955412:20,683,007...20,745,069
Ensembl chrNW_004955412:20,682,861...20,745,069
JBrowse link
G Neurog2 neurogenin 2 ISO (MGI:MGI:2670323|PMID:12895419), (MGI:MGI:3056020|PMID:15328020) MGI PMID:12895419, PMID:15328020 MGI:MGI:2670323, MGI:MGI:3056020 NCBI chrNW_004955457:14,268,078...14,287,050 JBrowse link
G Nfasc neurofascin ISO (MGI:MGI:3510083|PMID:15479642) MGI PMID:15479642 MGI:MGI:3510083 NCBI chrNW_004955406:40,632,971...40,814,930
Ensembl chrNW_004955406:40,743,872...40,808,962
JBrowse link
G Ngfr nerve growth factor receptor ISO (MGI:MGI:2178912|PMID:11978834) MGI PMID:11978834 MGI:MGI:2178912 NCBI chrNW_004955451:12,030,303...12,047,305
Ensembl chrNW_004955451:12,030,252...12,047,305
JBrowse link
G Nkx2-1 NK2 homeobox 1 ISO (MGI:MGI:2157787|PMID:11830575) MGI PMID:11830575 MGI:MGI:2157787 NCBI chrNW_004955409:24,612,490...24,616,360
Ensembl chrNW_004955409:24,612,635...24,616,430
JBrowse link
G Nog noggin ISO (MGI:MGI:3653290|PMID:12435358) MGI PMID:12435358 MGI:MGI:3653290 NCBI chrNW_004955451:6,192,368...6,193,766
Ensembl chrNW_004955451:6,193,042...6,193,740
JBrowse link
G Nr4a3 nuclear receptor subfamily 4 group A member 3 ISO (MGI:MGI:3056852|PMID:15456880) MGI PMID:15456880 MGI:MGI:3056852 NCBI chrNW_004955419:25,779,368...25,817,445
Ensembl chrNW_004955419:25,779,178...25,818,706
JBrowse link
G Nrcam neuronal cell adhesion molecule ISO (MGI:MGI:2447374|PMID:12182881) UniProtKB PMID:12182881 MGI:MGI:2447374 NCBI chrNW_004955410:12,437,248...12,518,083
Ensembl chrNW_004955410:12,437,248...12,518,075
JBrowse link
G Nrp1 neuropilin 1 ISO (MGI:MGI:3578029|PMID:15814794)
(MGI:MGI:3505728|PMID:12852851)
(MGI:MGI:3525900|PMID:15604101), (MGI:MGI:3578029|PMID:15814794)
MGI PMID:12852851, PMID:15604101, PMID:15814794 MGI:MGI:3505728, MGI:MGI:3525900, MGI:MGI:3578029 NCBI chrNW_004955462:4,101,997...4,241,012
Ensembl chrNW_004955462:4,101,999...4,241,012
JBrowse link
G Nrp2 neuropilin 2 ISO (MGI:MGI:3578029|PMID:15814794) MGI
RGD
PMID:9288754, PMID:15814794 MGI:MGI:3578029, RGD:633436 NCBI chrNW_004955457:9,197,621...9,316,789
Ensembl chrNW_004955457:9,197,405...9,316,787
JBrowse link
G Ntf3 neurotrophin 3 ISO (MGI:MGI:80051|PMID:8861722)
(MGI:MGI:3576404|PMID:15550985)
MGI PMID:8861722, PMID:15550985 MGI:MGI:3576404, MGI:MGI:80051 NCBI chrNW_004955413:3,207,669...3,273,371
Ensembl chrNW_004955413:3,207,123...3,273,491
JBrowse link
G Ntn1 netrin 1 ISO (MGI:MGI:2181259|PMID:12051827), (MGI:MGI:2654974|PMID:12679031), (MGI:MGI:3691957|PMID:17086203)
(MGI:MGI:1861288|PMID:10908620), (MGI:MGI:3616408|PMID:16481423), (MGI:MGI:3758130|PMID:17898206)
MGI PMID:10908620, PMID:12051827, PMID:12679031, PMID:16481423, PMID:17086203, PMID:17898206 MGI:MGI:1861288, MGI:MGI:2181259, MGI:MGI:2654974, MGI:MGI:3616408, MGI:MGI:3691957, MGI:MGI:3758130 NCBI chrNW_004955467:7,795,175...7,991,597
Ensembl chrNW_004955467:7,794,735...7,991,695
JBrowse link
G Ntrk1 neurotrophic receptor tyrosine kinase 1 ISO RGD PMID:18344912 RGD:5684394 NCBI chrNW_004955545:2,929,704...2,947,579
Ensembl chrNW_004955545:2,929,704...2,947,579
JBrowse link
G Otx2 orthodenticle homeobox 2 ISO (PMID:16267555) UniProtKB PMID:16267555 NCBI chrNW_004955466:10,755,143...10,764,957
Ensembl chrNW_004955466:10,755,012...10,765,095
JBrowse link
G Pax6 paired box 6 ISO (MGI:MGI:2179161|PMID:11967891), (MGI:MGI:2679739|PMID:14586016) MGI PMID:11967891, PMID:14586016 MGI:MGI:2179161, MGI:MGI:2679739 NCBI chrNW_004955476:10,058,979...10,074,668
Ensembl chrNW_004955476:10,058,961...10,074,162
JBrowse link
G Pgrmc1 progesterone receptor membrane component 1 ISO RGD PMID:10656251 RGD:727289 NCBI chrNW_004955534:698,895...706,586
Ensembl chrNW_004955534:698,734...706,946
JBrowse link
G Pla2g10 phospholipase A2 group X ISO (PMID:15927955) MGI PMID:15927955 NCBI chrNW_004955442:4,208,497...4,225,893
Ensembl chrNW_004955442:4,208,575...4,225,834
JBrowse link
G Plxna3 plexin A3 ISO (MGI:MGI:2152659|PMID:11683995) MGI PMID:11683995 MGI:MGI:2152659 NCBI chrNW_004955580:958,033...972,123
Ensembl chrNW_004955580:957,860...972,772
JBrowse link
G Plxna4 plexin A4 ISO (MGI:MGI:3578029|PMID:15814794) MGI PMID:15814794 MGI:MGI:3578029 NCBI chrNW_004955410:35,281,042...35,714,094
Ensembl chrNW_004955410:35,281,648...35,713,453
JBrowse link
G Pou4f2 POU class 4 homeobox 2 ISO (MGI:MGI:1928568|PMID:11163266) MGI PMID:11163266 MGI:MGI:1928568 NCBI chrNW_004955428:2,325,775...2,329,122
Ensembl chrNW_004955428:2,324,834...2,329,205
JBrowse link
G Ptpro protein tyrosine phosphatase receptor type O ISO (MGI:MGI:5306568|PMID:19800005) UniProtKB PMID:19800005 MGI:MGI:5306568 NCBI chrNW_004955413:12,019,026...12,248,026
Ensembl chrNW_004955413:12,018,888...12,248,807
JBrowse link
G Rac1 Rac family small GTPase 1 ISO (MGI:MGI:3709518|PMID:17409253) MGI PMID:17409253 MGI:MGI:3709518 NCBI chrNW_004955460:13,270,159...13,295,562
Ensembl chrNW_004955460:13,270,159...13,311,351
JBrowse link
G Reln reelin ISO (MGI:MGI:3611655|PMID:16324103) MGI PMID:16324103 MGI:MGI:3611655 NCBI chrNW_004955410:8,424,439...8,863,966
Ensembl chrNW_004955410:8,424,394...8,863,969
JBrowse link
G Robo1 roundabout guidance receptor 1 ISO (MGI:MGI:3040153|PMID:15084255)
(MGI:MGI:3041390|PMID:15091338)
MGI
RGD
PMID:9458045, PMID:15084255, PMID:15091338 MGI:MGI:3040153, MGI:MGI:3041390, RGD:61733 NCBI chrNW_004955407:12,593,911...13,485,723
Ensembl chrNW_004955407:13,107,235...13,487,053
JBrowse link
G Robo2 roundabout guidance receptor 2 ISO (MGI:MGI:3041390|PMID:15091338) RGD
MGI
PMID:10102268, PMID:15091338 MGI:MGI:3041390, RGD:68763 NCBI chrNW_004955407:14,301,689...15,549,561
Ensembl chrNW_004955407:14,305,498...14,842,790
JBrowse link
G Robo3 roundabout guidance receptor 3 ISO (MGI:MGI:3040153|PMID:15084255), (MGI:MGI:6316558|PMID:30843071)
(MGI:MGI:3040153|PMID:15084255), (MGI:MGI:3047174|PMID:15233918)
MGI PMID:15084255, PMID:15233918, PMID:30843071 MGI:MGI:3040153, MGI:MGI:3047174, MGI:MGI:6316558 NCBI chrNW_004955412:25,937,624...25,953,458
Ensembl chrNW_004955412:25,937,624...25,953,189
JBrowse link
G Runx3 RUNX family transcription factor 3 ISO (MGI:MGI:2387717|PMID:12352981) MGI PMID:12352981 MGI:MGI:2387717 NCBI chrNW_004955452:4,580,444...4,606,820
Ensembl chrNW_004955452:4,579,331...4,636,884
JBrowse link
G Ryk receptor like tyrosine kinase ISO (MGI:MGI:3625635|PMID:16723543)
(MGI:MGI:4887339|PMID:16116452)
UniProtKB PMID:16116452, PMID:16723543 MGI:MGI:3625635, MGI:MGI:4887339 NCBI chrNW_004955501:4,360,051...4,419,083
Ensembl chrNW_004955501:4,328,682...4,419,307
JBrowse link
G Scn1b sodium voltage-gated channel beta subunit 1 ISO (MGI:MGI:3778100|PMID:18354028) MGI PMID:18354028 MGI:MGI:3778100 NCBI chrNW_004955468:4,375,517...4,383,383
Ensembl chrNW_004955468:4,375,157...4,383,502
JBrowse link
G Sema3a semaphorin 3A ISO (MGI:MGI:3578029|PMID:15814794), (MGI:MGI:3588545|PMID:15869472), (MGI:MGI:3653290|PMID:12435358)
(MGI:MGI:3710026|PMID:17428830), (MGI:MGI:3711619|PMID:17417650)
PMID:21068336
(MGI:MGI:3525900|PMID:15604101)
MGI PMID:12435358, PMID:15604101, PMID:15814794, PMID:15869472, PMID:17417650, PMID:17428830, PMID:21068336 MGI:MGI:3525900, MGI:MGI:3578029, MGI:MGI:3588545, MGI:MGI:3653290, MGI:MGI:3710026, MGI:MGI:3711619, RGD:8554551 NCBI chrNW_004955410:2,146,088...2,344,342
Ensembl chrNW_004955410:2,144,388...2,338,973
JBrowse link
G Sema3c semaphorin 3C ISO (MGI:MGI:5315341|PMID:17021275) UniProtKB PMID:17021275 MGI:MGI:5315341 NCBI chrNW_004955410:4,795,658...4,953,460
Ensembl chrNW_004955410:4,794,477...4,954,906
JBrowse link
G Sema3f semaphorin 3F ISO (MGI:MGI:3653290|PMID:12435358)
(PMID:15814794)
MGI PMID:12435358, PMID:15814794 MGI:MGI:3653290 NCBI chrNW_004955532:1,992,417...2,015,879
Ensembl chrNW_004955532:1,988,486...2,017,170
JBrowse link
G Sema4f ssemaphorin 4F ISO RGD PMID:10051670 RGD:69991 NCBI chrNW_004955424:11,123,326...11,152,909
Ensembl chrNW_004955424:11,123,263...11,152,907
JBrowse link
G Sema5a semaphorin 5A ISO (MGI:MGI:2447390|PMID:12506007) MGI PMID:12506007 MGI:MGI:2447390 NCBI chrNW_004955504:6,343,747...6,691,945
Ensembl chrNW_004955504:6,350,866...6,762,104
JBrowse link
G Sema6a semaphorin 6A ISO (MGI:MGI:3607683|PMID:16205717) UniProtKB PMID:16205717 MGI:MGI:3607683 NCBI chrNW_004955408:36,219,814...36,344,131
Ensembl chrNW_004955408:36,217,588...36,307,284
JBrowse link
G Sema6c semaphorin 6C ISO RGD PMID:10049528 RGD:69992 NCBI chrNW_004955588:490,581...504,436
Ensembl chrNW_004955588:490,615...500,189
JBrowse link
G Shh sonic hedgehog signaling molecule ISO (MGI:MGI:2654974|PMID:12679031)
(MGI:MGI:2662556|PMID:12756179), (MGI:MGI:3628676|PMID:15065125)
MGI PMID:12679031, PMID:12756179, PMID:15065125 MGI:MGI:2654974, MGI:MGI:2662556, MGI:MGI:3628676 NCBI chrNW_004955491:8,647,133...8,657,381 JBrowse link
G Slit1 slit guidance ligand 1 ISO (PMID:11748139)
(MGI:MGI:2181259|PMID:12051827)
(MGI:MGI:3621682|PMID:11804571)
(MGI:MGI:3041390|PMID:15091338)
(MGI:MGI:2678272|PMID:12954717)
UniProtKB
MGI
PMID:11748139, PMID:11804571, PMID:12051827, PMID:12954717, PMID:15091338 MGI:MGI:2181259, MGI:MGI:2678272, MGI:MGI:3041390, MGI:MGI:3621682 NCBI chrNW_004955507:3,204,135...3,365,319
Ensembl chrNW_004955507:3,201,556...3,365,471
JBrowse link
G Slit2 slit guidance ligand 2 ISO (PMID:11748139)
(MGI:MGI:3041390|PMID:15091338)
(MGI:MGI:2679928|PMID:14605369)
(MGI:MGI:3621682|PMID:11804571)
(MGI:MGI:2678272|PMID:12954717), (MGI:MGI:2683853|PMID:12879062)
UniProtKB
MGI
PMID:11748139, PMID:11804571, PMID:12879062, PMID:12954717, PMID:14605369, PMID:15091338 MGI:MGI:2678272, MGI:MGI:2679928, MGI:MGI:2683853, MGI:MGI:3041390, MGI:MGI:3621682 NCBI chrNW_004955480:3,982,977...4,314,160
Ensembl chrNW_004955480:3,984,586...4,313,908
JBrowse link
G Slit3 slit guidance ligand 3 ISO (PMID:11748139)
(MGI:MGI:2678272|PMID:12954717)
UniProtKB
MGI
PMID:11748139, PMID:12954717 MGI:MGI:2678272 NCBI chrNW_004955408:21,719,487...22,322,958
Ensembl chrNW_004955408:21,722,632...22,322,917
JBrowse link
G Smad4 SMAD family member 4 ISO (MGI:MGI:4940418|PMID:21300867) MGI PMID:21300867 MGI:MGI:4940418 NCBI chrNW_004955402:35,956,080...36,001,746
Ensembl chrNW_004955402:35,961,165...35,994,538
JBrowse link
G Tenm2 teneurin transmembrane protein 2 ISO (PMID:21724987) UniProtKB PMID:21724987 NCBI chrNW_004955408:20,150,223...21,340,276
Ensembl chrNW_004955408:20,437,067...21,338,897
JBrowse link
G Tgfb2 transforming growth factor beta 2 ISO (MGI:MGI:3522686|PMID:15528466) MGI PMID:15528466 MGI:MGI:3522686 NCBI chrNW_004955406:174,949...249,248
Ensembl chrNW_004955406:172,814...249,248
JBrowse link
G Ttc8 tetratricopeptide repeat domain 8 ISO (MGI:MGI:5014119|PMID:21646512) MGI PMID:21646512 MGI:MGI:5014119 NCBI chrNW_004955438:11,410,196...11,466,044
Ensembl chrNW_004955438:11,409,982...11,466,523
JBrowse link
G Unc5a unc-5 netrin receptor A ISO RGD PMID:9126742 RGD:634450 NCBI chrNW_004955408:29,071,812...29,132,744
Ensembl chrNW_004955408:29,071,792...29,132,037
JBrowse link
G Unc5b unc-5 netrin receptor B ISO PMID:21673655 RGD
MGI
PMID:9126742, PMID:21673655 RGD:634450, RGD:8554719 NCBI chrNW_004955437:20,120,996...20,199,877
Ensembl chrNW_004955437:20,120,946...20,199,877
JBrowse link
G Unc5c unc-5 netrin receptor C ISO (MGI:MGI:6274971|PMID:22685302)
(MGI:MGI:5464968|PMID:23144223)
UniProt
MGI
PMID:22685302, PMID:23144223 MGI:MGI:5464968, MGI:MGI:6274971 NCBI chrNW_004955405:5,791,286...6,049,952
Ensembl chrNW_004955405:5,797,590...5,950,544
JBrowse link
G Unc5d unc-5 netrin receptor D ISO (MGI:MGI:5486433|PMID:21673655) MGI PMID:21673655 MGI:MGI:5486433 NCBI chrNW_004955463:11,404,164...11,785,100
Ensembl chrNW_004955463:11,532,711...11,779,202
JBrowse link
G Usp33 ubiquitin specific peptidase 33 ISO (MGI:MGI:4418596|PMID:19706539) UniProtKB PMID:19706539 MGI:MGI:4418596 NCBI chrNW_004955423:15,424,349...15,469,344
Ensembl chrNW_004955423:15,423,932...15,469,344
JBrowse link
G Vasp vasodilator stimulated phosphoprotein ISO (MGI:MGI:3054149|PMID:15371503) MGI PMID:15371503 MGI:MGI:3054149 NCBI chrNW_004955574:21,569...33,705
Ensembl chrNW_004955574:21,911...34,197
JBrowse link
G Vax1 ventral anterior homeobox 1 ISO (MGI:MGI:1350761|PMID:10601035) MGI PMID:10601035 MGI:MGI:1350761 NCBI chrNW_004955431:21,853,636...21,857,547
Ensembl chrNW_004955431:21,853,636...21,857,547
JBrowse link
G Wnt3a Wnt family member 3A ISO (MGI:MGI:3806438|PMID:18716223) MGI PMID:18716223 MGI:MGI:3806438 NCBI chrNW_004955581:351,375...382,541
Ensembl chrNW_004955581:350,889...382,541
JBrowse link
G Wnt5a Wnt family member 5A ISO (MGI:MGI:4949958|PMID:21483795) UniProtKB PMID:21483795 MGI:MGI:4949958 NCBI chrNW_004955430:5,304,817...5,325,684
Ensembl chrNW_004955430:5,304,745...5,325,684
JBrowse link
axon midline choice point recognition term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G App amyloid beta precursor protein ISO (MGI:MGI:69837|PMID:8001115) MGI PMID:8001115 MGI:MGI:69837 NCBI chrNW_004955407:25,725,259...25,973,582
Ensembl chrNW_004955407:25,722,849...25,974,268
JBrowse link
G Foxg1 forkhead box G1 ISO (MGI:MGI:3051707|PMID:15240555) MGI PMID:15240555 MGI:MGI:3051707 NCBI chrNW_004955409:31,672,960...31,674,970 JBrowse link
G Robo1 roundabout guidance receptor 1 ISO PMID:18986510
(MGI:MGI:3823169|PMID:18986510)
UniProt
UniProtKB
PMID:18986510 MGI:MGI:3823169, RGD:2314842 NCBI chrNW_004955407:12,593,911...13,485,723
Ensembl chrNW_004955407:13,107,235...13,487,053
JBrowse link
G Robo2 roundabout guidance receptor 2 ISO (MGI:MGI:3823169|PMID:18986510) UniProtKB PMID:18986510 MGI:MGI:3823169 NCBI chrNW_004955407:14,301,689...15,549,561
Ensembl chrNW_004955407:14,305,498...14,842,790
JBrowse link
G Robo3 roundabout guidance receptor 3 ISO (MGI:MGI:3823169|PMID:18986510), (MGI:MGI:3834283|PMID:18466743) UniProtKB PMID:18466743, PMID:18986510 MGI:MGI:3823169, MGI:MGI:3834283 NCBI chrNW_004955412:25,937,624...25,953,458
Ensembl chrNW_004955412:25,937,624...25,953,189
JBrowse link
axon regeneration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoa1 apolipoprotein A1 NOT ISO (MGI:MGI:70238|PMID:7798939) MGI PMID:7798939 MGI:MGI:70238 NCBI chrNW_004955412:18,170,331...18,172,298
Ensembl chrNW_004955412:18,170,331...18,172,298
JBrowse link
G Apoe apolipoprotein E NOT ISO (MGI:MGI:70238|PMID:7798939) MGI PMID:7798939 MGI:MGI:70238 NCBI chrNW_004955555:1,998,170...2,002,003
Ensembl chrNW_004955555:1,999,711...2,001,888
JBrowse link
G Bcl2 BCL2 apoptosis regulator ISO (MGI:MGI:85682|PMID:9009190) MGI PMID:9009190 MGI:MGI:85682 NCBI chrNW_004955402:46,911,125...47,084,214
Ensembl chrNW_004955402:46,916,266...47,084,485
JBrowse link
G Chl1 cell adhesion molecule L1 like ISO RGD PMID:14707551 RGD:1303346 NCBI chrNW_004955421:12,763,432...12,957,852
Ensembl chrNW_004955421:12,763,287...12,958,065
JBrowse link
G Cspg5 chondroitin sulfate proteoglycan 5 ISO RGD PMID:11069908 RGD:1298825 NCBI chrNW_004955420:24,735,155...24,746,580
Ensembl chrNW_004955420:24,734,561...24,747,414
JBrowse link
G Ctnna1 catenin alpha 1 ISO RGD PMID:12387456 RGD:632464 NCBI chrNW_004955418:1,592,555...1,754,423
Ensembl chrNW_004955418:1,592,229...1,754,689
JBrowse link
G Dag1 dystroglycan 1 ISO RGD PMID:16228655 RGD:11537480 NCBI chrNW_004955532:1,446,553...1,465,310
Ensembl chrNW_004955532:1,397,900...1,466,312
JBrowse link
G Dhfr dihydrofolate reductase ISO PMID:20424322 BHF-UCL PMID:20424322 RGD:10054082 NCBI chrNW_004955418:29,274,170...29,283,028 JBrowse link
G Folr1 folate receptor alpha ISO (MGI:MGI:4460071|PMID:20424322) BHF-UCL PMID:20424322 MGI:MGI:4460071 NCBI chrNW_004955414:19,188,830...19,197,728
Ensembl chrNW_004955414:19,187,388...19,197,728
JBrowse link
G Isl1 ISL LIM homeobox 1 ISO RGD PMID:10363827 RGD:2311122 NCBI chrNW_004955446:15,824,956...15,835,000
Ensembl chrNW_004955446:15,824,035...15,835,046
JBrowse link
G Jak2 Janus kinase 2 ISO RGD PMID:15716400 RGD:1641846 NCBI chrNW_004955434:9,227,897...9,341,208
Ensembl chrNW_004955434:9,227,595...9,341,208
JBrowse link
G Jam3 junctional adhesion molecule 3 ISO RGD PMID:22950044 RGD:7488944 NCBI chrNW_004955412:34,901,850...34,967,394
Ensembl chrNW_004955412:34,901,681...34,967,394
JBrowse link
G Jun Jun proto-oncogene, AP-1 transcription factor subunit ISO (MGI:MGI:3772001|PMID:15233917) MGI PMID:15233917 MGI:MGI:3772001 NCBI chrNW_004955464:1,107,598...1,110,326 JBrowse link
G Mag myelin associated glycoprotein ISO (MGI:MGI:4845807|PMID:20731761) MGI PMID:20731761 MGI:MGI:4845807 NCBI chrNW_004955468:4,584,068...4,598,772
Ensembl chrNW_004955468:4,584,162...4,598,914
JBrowse link
G Mapk8ip3 mitogen-activated protein kinase 8 interacting protein 3 ISO PMID:25944905 UniProt PMID:25944905 RGD:13673780 NCBI chrNW_004955442:15,498,909...15,545,298
Ensembl chrNW_004955442:15,498,909...15,545,298
JBrowse link
G Mtr 5-methyltetrahydrofolate-homocysteine methyltransferase ISO PMID:20424322 BHF-UCL PMID:20424322 RGD:10054082 NCBI chrNW_004955492:3,372,915...3,474,173
Ensembl chrNW_004955492:3,376,512...3,474,180
JBrowse link
G Nefh neurofilament heavy ISO RGD PMID:10646539 RGD:9698439 NCBI chrNW_004955455:3,735,330...3,744,714
Ensembl chrNW_004955455:3,735,410...3,744,107
JBrowse link
G Nefm neurofilament medium ISO RGD PMID:15206821 RGD:9698447 NCBI chrNW_004955403:47,920,408...47,926,922 JBrowse link
G Nrep neuronal regeneration related protein ISO RGD PMID:15485502 RGD:1540387 NCBI chrNW_004955418:3,435,784...3,464,667 JBrowse link
G Rxra retinoid X receptor alpha ISO RGD PMID:16782282 RGD:1643108 NCBI chrNW_004955513:3,313,544...3,386,544
Ensembl chrNW_004955513:3,335,897...3,386,994
JBrowse link
G Vcan versican ISO RGD PMID:12526031 RGD:632591 NCBI chrNW_004955418:26,967,595...27,078,430 JBrowse link
axon target recognition term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bdnf brain derived neurotrophic factor ISO (MGI:MGI:3511733|PMID:15464571) MGI PMID:15464571 MGI:MGI:3511733 NCBI chrNW_004955476:6,773,244...6,822,201
Ensembl chrNW_004955476:6,772,088...6,822,588
JBrowse link
G Foxb1 forkhead box B1 ISO (MGI:MGI:1352733|PMID:10662642), (MGI:MGI:1931655|PMID:11170346) UniProtKB PMID:10662642, PMID:11170346 MGI:MGI:1352733, MGI:MGI:1931655 NCBI chrNW_004955450:14,867,941...14,902,990 JBrowse link
G Stxbp1 syntaxin binding protein 1 ISO (MGI:MGI:3046454|PMID:15182301) MGI PMID:15182301 MGI:MGI:3046454 NCBI chrNW_004955419:963,829...1,000,759
Ensembl chrNW_004955419:963,829...1,000,759
JBrowse link
G Uchl1 ubiquitin C-terminal hydrolase L1 ISO (MGI:MGI:66533|PMID:8474599) MGI PMID:8474599 MGI:MGI:66533 NCBI chrNW_004955443:6,367,519...6,379,638
Ensembl chrNW_004955443:6,367,460...6,380,462
JBrowse link
axonal fasciculation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Amigo1 adhesion molecule with Ig like domain 1 ISO PMID:12629050 UniProt PMID:12629050 RGD:634626 NCBI chrNW_004955435:12,918,270...12,930,362
Ensembl chrNW_004955435:12,924,240...12,930,362
JBrowse link
G Arhgap35 Rho GTPase activating protein 35 ISO (MGI:MGI:1933687|PMID:11283609) UniProtKB PMID:11283609 MGI:MGI:1933687 NCBI chrNW_004955574:915,604...984,744
Ensembl chrNW_004955574:915,325...984,744
JBrowse link
G Casp3 caspase 3 ISO RGD PMID:25898930 RGD:13781947 NCBI chrNW_004955403:24,315,712...24,326,271 JBrowse link
G Casp6 caspase 6 ISO RGD PMID:25898930 RGD:13781947 NCBI chrNW_004955496:575,839...584,287
Ensembl chrNW_004955496:577,832...584,287
JBrowse link
G Cdk5r1 cyclin dependent kinase 5 regulatory subunit 1 ISO (MGI:MGI:1347398|PMID:10545161) UniProtKB PMID:10545161 MGI:MGI:1347398 NCBI chrNW_004955481:7,408,089...7,411,813
Ensembl chrNW_004955481:7,408,205...7,409,128
JBrowse link
G Celsr3 cadherin EGF LAG seven-pass G-type receptor 3 ISO (MGI:MGI:3578066|PMID:15778712) MGI PMID:15778712 MGI:MGI:3578066 NCBI chrNW_004955532:724,306...749,192
Ensembl chrNW_004955532:725,243...749,173
JBrowse link
G Cnr1 cannabinoid receptor 1 ISO (MGI:MGI:4837552|PMID:20962221) MGI PMID:20962221 MGI:MGI:4837552 NCBI chrNW_004955411:15,052,151...15,077,320
Ensembl chrNW_004955411:15,052,163...15,077,320
JBrowse link
G Cntn2 contactin 2 ISO (MGI:MGI:3804601|PMID:18650339) MGI PMID:18650339 MGI:MGI:3804601 NCBI chrNW_004955406:40,831,897...40,862,445
Ensembl chrNW_004955406:40,831,850...40,858,569
JBrowse link
G Crtac1 cartilage acidic protein 1 ISO (MGI:MGI:5086019|PMID:21817055) MGI PMID:21817055 MGI:MGI:5086019 NCBI chrNW_004955507:3,916,803...4,062,118
Ensembl chrNW_004955507:3,916,625...4,062,118
JBrowse link
G Ephb2 EPH receptor B2 ISO (MGI:MGI:84499|PMID:8947026) UniProtKB PMID:8947026 MGI:MGI:84499 NCBI chrNW_004955452:2,844,713...2,986,790
Ensembl chrNW_004955452:2,844,713...2,980,445
JBrowse link
G Ephb3 EPH receptor B3 ISO (MGI:MGI:84499|PMID:8947026) UniProtKB PMID:8947026 MGI:MGI:84499 NCBI chrNW_004955420:22,900,588...22,919,924
Ensembl chrNW_004955420:22,901,337...22,920,712
JBrowse link
G Fezf2 FEZ family zinc finger 2 ISO (MGI:MGI:3610776|PMID:16284245) MGI PMID:16284245 MGI:MGI:3610776 NCBI chrNW_004955517:3,439,999...3,443,477
Ensembl chrNW_004955517:3,439,999...3,443,846
JBrowse link
G L1cam L1 cell adhesion molecule ISO RGD PMID:3856258 RGD:11570517 NCBI chrNW_004955580:548,442...561,580
Ensembl chrNW_004955580:549,368...561,486
JBrowse link
G Ncam1 neural cell adhesion molecule 1 ISO RGD PMID:3856258 RGD:11570517 NCBI chrNW_004955412:14,630,109...14,923,847
Ensembl chrNW_004955412:14,630,443...14,923,926
JBrowse link
G Ncam2 neural cell adhesion molecule 2 ISO RGD PMID:15174086 RGD:1303997 NCBI chrNW_004955407:21,730,331...22,220,664
Ensembl chrNW_004955407:21,730,434...22,215,377
JBrowse link
G Ndn necdin, MAGE family member ISO (MGI:MGI:3582873|PMID:15972963) MGI PMID:15972963 MGI:MGI:3582873 NCBI chrNW_004955416:31,125,354...31,127,010
Ensembl chrNW_004955416:31,125,924...31,126,889
JBrowse link
G Nrp1 neuropilin 1 ISO (MGI:MGI:3710026|PMID:17428830) MGI PMID:17428830 MGI:MGI:3710026 NCBI chrNW_004955462:4,101,997...4,241,012
Ensembl chrNW_004955462:4,101,999...4,241,012
JBrowse link
G Ptprz1 protein tyrosine phosphatase receptor type Z1 ISO RGD PMID:16150606 RGD:9590115 NCBI chrNW_004955479:3,611,658...3,734,225
Ensembl chrNW_004955479:3,624,993...3,733,183
JBrowse link
G Rtn4 reticulon 4 ISO (MGI:MGI:4830045|PMID:20573699) UniProtKB
UniProt
PMID:20573699 MGI:MGI:4830045, RGD:8554113 NCBI chrNW_004955424:28,061,346...28,125,838 JBrowse link
G Sema3a semaphorin 3A ISO (MGI:MGI:3710026|PMID:17428830) MGI PMID:17428830 MGI:MGI:3710026 NCBI chrNW_004955410:2,146,088...2,344,342
Ensembl chrNW_004955410:2,144,388...2,338,973
JBrowse link
G Sema5a semaphorin 5A ISO PMID:15603739 UniProt PMID:15603739 RGD:8553809 NCBI chrNW_004955504:6,343,747...6,691,945
Ensembl chrNW_004955504:6,350,866...6,762,104
JBrowse link
G Tnfrsf21 TNF receptor superfamily member 21 ISO RGD PMID:25898930 RGD:13781947 NCBI chrNW_004955437:11,877,051...11,915,220
Ensembl chrNW_004955437:11,876,895...11,915,460
JBrowse link
axonogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actb actin beta ISO RGD PMID:12504890 RGD:728124 NCBI chrNW_004955460:10,358,100...10,361,585
Ensembl chrNW_004955460:10,356,699...10,361,585
JBrowse link
G Adcy1 adenylate cyclase 1 ISO (MGI:MGI:3699973|PMID:17229090) MGI PMID:17229090 MGI:MGI:3699973 NCBI chrNW_004955456:6,833,992...6,930,990
Ensembl chrNW_004955456:6,841,637...6,930,990
JBrowse link
G Afg3l2 AFG3 like matrix AAA peptidase subunit 2 ISO (PMID:27642048)
(MGI:MGI:3618456|PMID:2917690)
UniProtKB
MGI
PMID:2917690, PMID:27642048 MGI:MGI:3618456 NCBI chrNW_004955402:1,037,414...1,069,165
Ensembl chrNW_004955402:1,037,402...1,069,165
JBrowse link
G Als2 alsin Rho guanine nucleotide exchange factor ALS2 ISO RGD PMID:16802292 RGD:1599082 NCBI chrNW_004955403:22,449...104,577
Ensembl chrNW_004955403:22,449...104,948
JBrowse link
G Amigo1 adhesion molecule with Ig like domain 1 ISO RGD PMID:12629050 RGD:634626 NCBI chrNW_004955435:12,918,270...12,930,362
Ensembl chrNW_004955435:12,924,240...12,930,362
JBrowse link
G Ank3 ankyrin 3 ISO (MGI:MGI:5426783|PMID:11724816) BHF-UCL PMID:11724816 MGI:MGI:5426783 NCBI chrNW_004955425:13,522,233...13,851,286 JBrowse link
G Apc APC regulator of WNT signaling pathway ISO (MGI:MGI:3047466|PMID:15207235), (MGI:MGI:3806438|PMID:18716223)
(MGI:MGI:3806438|PMID:18716223)
MGI PMID:15207235, PMID:18716223 MGI:MGI:3047466, MGI:MGI:3806438 NCBI chrNW_004955418:2,567,804...2,675,062
Ensembl chrNW_004955418:2,566,975...2,674,832
JBrowse link
G App amyloid beta precursor protein ISO (MGI:MGI:3606204|PMID:9390996) MGI PMID:9390996 MGI:MGI:3606204 NCBI chrNW_004955407:25,725,259...25,973,582
Ensembl chrNW_004955407:25,722,849...25,974,268
JBrowse link
G Atl1 atlastin GTPase 1 ISO PMID:16537571 UniProt PMID:16537571 RGD:8553504 NCBI chrNW_004955409:12,222,591...12,301,990
Ensembl chrNW_004955409:12,222,591...12,301,990
JBrowse link
G Bcl11b BAF chromatin remodeling complex subunit BCL11B ISO (MGI:MGI:3578473|PMID:15664173) MGI PMID:15664173 MGI:MGI:3578473 NCBI chrNW_004955438:20,562,345...20,637,662
Ensembl chrNW_004955438:20,564,449...20,637,103
JBrowse link
G Bcl2 BCL2 apoptosis regulator ISO (MGI:MGI:85682|PMID:9009190) MGI PMID:9009190 MGI:MGI:85682 NCBI chrNW_004955402:46,911,125...47,084,214
Ensembl chrNW_004955402:46,916,266...47,084,485
JBrowse link
G Brsk1 BR serine/threonine kinase 1 ISO (MGI:MGI:4462353|PMID:17482548) UniProtKB PMID:17482548 MGI:MGI:4462353 NCBI chrNW_004955567:924,728...943,092
Ensembl chrNW_004955567:924,734...943,701
JBrowse link
G Brsk2 BR serine/threonine kinase 2 ISO (MGI:MGI:4462353|PMID:17482548) UniProtKB PMID:17482548 MGI:MGI:4462353 NCBI chrNW_004955476:10,911,515...10,951,544
Ensembl chrNW_004955476:10,911,515...10,929,183
JBrowse link
G Cacna1f calcium voltage-gated channel subunit alpha1 F ISO (MGI:MGI:3608035|PMID:16155113) MGI PMID:16155113 MGI:MGI:3608035 NCBI chrNW_004955543:692,035...717,364
Ensembl chrNW_004955543:692,035...717,364
JBrowse link
G Cck cholecystokinin ISO (MGI:MGI:3573824|PMID:15152034) MGI PMID:15152034 MGI:MGI:3573824 NCBI chrNW_004955420:28,438,806...28,443,458
Ensembl chrNW_004955420:28,438,806...28,443,458
JBrowse link
G Cckar cholecystokinin A receptor ISO (MGI:MGI:3573824|PMID:15152034) MGI PMID:15152034 MGI:MGI:3573824 NCBI chrNW_004955443:18,738,029...18,748,684
Ensembl chrNW_004955443:18,737,974...18,748,727
JBrowse link
G Cdk5 cyclin dependent kinase 5 ISO (MGI:MGI:1928548|PMID:11163260) MGI PMID:11163260 MGI:MGI:1928548 NCBI chrNW_004955491:5,491,744...5,497,280
Ensembl chrNW_004955491:5,491,744...5,497,280
JBrowse link
G Cnp 2',3'-cyclic nucleotide 3' phosphodiesterase ISO (MGI:MGI:3050897|PMID:12590258) MGI PMID:12590258 MGI:MGI:3050897 NCBI chrNW_004955451:16,115,137...16,119,261
Ensembl chrNW_004955451:16,114,454...16,118,622
JBrowse link
G Cntn2 contactin 2 ISO RGD PMID:2317872 RGD:727707 NCBI chrNW_004955406:40,831,897...40,862,445
Ensembl chrNW_004955406:40,831,850...40,858,569
JBrowse link
G Creb1 cAMP responsive element binding protein 1 ISO (MGI:MGI:2179186|PMID:11988169) MGI PMID:11988169 MGI:MGI:2179186 NCBI chrNW_004955457:7,424,403...7,490,630
Ensembl chrNW_004955457:7,431,736...7,491,149
JBrowse link
G Ctnna2 catenin alpha 2 ISO (MGI:MGI:3654578|PMID:16691566) UniProtKB PMID:16691566 MGI:MGI:3654578 NCBI chrNW_004955424:5,985,170...7,055,830
Ensembl chrNW_004955424:5,986,073...6,911,826
JBrowse link
G Dclk1 doublecortin like kinase 1 ISO (MGI:MGI:3614627|PMID:16387639) MGI PMID:16387639 MGI:MGI:3614627 NCBI chrNW_004955431:9,975,629...10,302,605
Ensembl chrNW_004955431:9,975,262...10,297,010
JBrowse link
G Dlx5 distal-less homeobox 5 ISO (MGI:MGI:2449888|PMID:12533617) MGI PMID:12533617 MGI:MGI:2449888 NCBI chrNW_004955432:13,429,832...13,434,160
Ensembl chrNW_004955432:13,429,415...13,434,258
JBrowse link
G Dock7 dedicator of cytokinesis 7 ISO (PMID:16982419) BHF-UCL PMID:16982419 NCBI chrNW_004955423:27,043,621...27,233,710
Ensembl chrNW_004955423:27,044,341...27,233,710
JBrowse link
G Drd2 dopamine receptor D2 ISO (MGI:MGI:2136539|PMID:11438590) MGI PMID:11438590 MGI:MGI:2136539 NCBI chrNW_004955412:15,054,255...15,114,558
Ensembl chrNW_004955412:15,054,038...15,114,573
JBrowse link
G Drgx dorsal root ganglia homeobox ISO (MGI:MGI:2137781|PMID:11498051) MGI PMID:11498051 MGI:MGI:2137781 NCBI chrNW_004955556:842,714...870,248
Ensembl chrNW_004955556:842,714...870,248
JBrowse link
G Dst dystonin ISO (MGI:MGI:60062|PMID:1634998) MGI PMID:1634998 MGI:MGI:60062 NCBI chrNW_004955502:3,175,918...3,610,823
Ensembl chrNW_004955502:3,267,527...3,610,823
JBrowse link
G Dvl1 dishevelled segment polarity protein 1 ISO (MGI:MGI:3028427|PMID:14734535) MGI PMID:14734535 MGI:MGI:3028427 NCBI chrNW_004955486:9,464,390...9,469,984
Ensembl chrNW_004955486:9,464,313...9,469,984
JBrowse link
G Erbb3 erb-b2 receptor tyrosine kinase 3 ISO RGD PMID:9030624 RGD:68774 NCBI chrNW_004955458:3,683,126...3,701,752
Ensembl chrNW_004955458:3,683,126...3,702,978
JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 ISO (MGI:MGI:3763776|PMID:17951031) MGI PMID:17951031 MGI:MGI:3763776 NCBI chrNW_004955551:2,321,190...2,427,000 JBrowse link
G Flot1 flotillin 1 ISO (MGI:MGI:3847013|PMID:19458231) MGI PMID:19458231 MGI:MGI:3847013 NCBI chrNW_004955583:717,246...729,924
Ensembl chrNW_004955583:713,560...729,924
JBrowse link
G Gsk3b glycogen synthase kinase 3 beta ISO (MGI:MGI:3806438|PMID:18716223) MGI PMID:18716223 MGI:MGI:3806438 NCBI chrNW_004955427:19,489,972...19,671,137
Ensembl chrNW_004955427:19,495,422...19,671,137
JBrowse link
G Igf1r insulin like growth factor 1 receptor ISO RGD PMID:16845384 RGD:1624300 NCBI chrNW_004955416:26,101,090...26,382,660
Ensembl chrNW_004955416:26,102,628...26,382,666
JBrowse link
G Kalrn kalirin RhoGEF kinase ISO RGD PMID:12177196 RGD:628431 NCBI chrNW_004955427:23,184,751...23,823,128
Ensembl chrNW_004955427:23,184,739...23,816,811
JBrowse link
G Klf7 Kruppel like factor 7 ISO (MGI:MGI:3581378|PMID:15964824) MGI PMID:15964824 MGI:MGI:3581378 NCBI chrNW_004955457:7,833,711...7,918,754
Ensembl chrNW_004955457:7,833,218...7,918,754
JBrowse link
G Llgl1 LLGL scribble cell polarity complex component 1 ISO PMID:21856246 UniProt PMID:21856246 RGD:8553614 NCBI chrNW_004955478:11,075,399...11,089,818
Ensembl chrNW_004955478:11,075,399...11,089,839
JBrowse link
G Map1b microtubule associated protein 1B ISO (MGI:MGI:3614337|PMID:11891784) MGI PMID:11891784 MGI:MGI:3614337 NCBI chrNW_004955575:914,607...1,020,971
Ensembl chrNW_004955575:913,723...1,021,028
JBrowse link
G Map2 microtubule associated protein 2 ISO (MGI:MGI:3614337|PMID:11891784), (MGI:MGI:4836447|PMID:20600662) MGI PMID:11891784, PMID:20600662 MGI:MGI:3614337, MGI:MGI:4836447 NCBI chrNW_004955457:5,678,826...5,816,114
Ensembl chrNW_004955457:5,678,436...5,875,024
JBrowse link
G Mapt microtubule associated protein tau ISO (MGI:MGI:3614337|PMID:11891784) MGI PMID:11891784 MGI:MGI:3614337 NCBI chrNW_004955478:10,222,439...10,271,439
Ensembl chrNW_004955478:10,225,823...10,271,442
JBrowse link
G Myh10 myosin heavy chain 10 ISO (MGI:MGI:1933038|PMID:11283949) MGI PMID:11283949 MGI:MGI:1933038 NCBI chrNW_004955467:8,298,514...8,427,459
Ensembl chrNW_004955467:8,298,527...8,427,459
JBrowse link
G Ndn necdin, MAGE family member ISO (MGI:MGI:3530392|PMID:15649943), (MGI:MGI:3582873|PMID:15972963) MGI PMID:15649943, PMID:15972963 MGI:MGI:3530392, MGI:MGI:3582873 NCBI chrNW_004955416:31,125,354...31,127,010
Ensembl chrNW_004955416:31,125,924...31,126,889
JBrowse link
G Nkx2-8 NK2 homeobox 8 ISO (MGI:MGI:3607408|PMID:16267219) MGI PMID:16267219 MGI:MGI:3607408 NCBI chrNW_004955409:24,529,414...24,531,293
Ensembl chrNW_004955409:24,529,594...24,530,998
JBrowse link
G Notch1 notch receptor 1 ISO (MGI:MGI:3526784|PMID:15598981)
(MGI:MGI:3604921|PMID:16120638)
MGI PMID:15598981, PMID:16120638 MGI:MGI:3526784, MGI:MGI:3604921 NCBI chrNW_004955513:4,225,939...4,264,875
Ensembl chrNW_004955513:4,225,956...4,263,259
JBrowse link
G Ntn1 netrin 1 ISO (MGI:MGI:1861288|PMID:10908620) MGI PMID:10908620 MGI:MGI:1861288 NCBI chrNW_004955467:7,795,175...7,991,597
Ensembl chrNW_004955467:7,794,735...7,991,695
JBrowse link
G Ntng1 netrin G1 ISO (MGI:MGI:2158548|PMID:11804778) MGI PMID:11804778 MGI:MGI:2158548 NCBI chrNW_004955435:10,923,557...11,247,091
Ensembl chrNW_004955435:10,923,490...11,248,995
JBrowse link
G Ntng2 netrin G2 ISO (MGI:MGI:2158548|PMID:11804778) MGI PMID:11804778 MGI:MGI:2158548 NCBI chrNW_004955513:1,654,398...1,701,062 JBrowse link
G Numb NUMB endocytic adaptor protein ISO (MGI:MGI:3526784|PMID:15598981) MGI PMID:15598981 MGI:MGI:3526784 NCBI chrNW_004955523:2,025,652...2,076,037 JBrowse link
G Numbl NUMB like endocytic adaptor protein ISO (MGI:MGI:3526784|PMID:15598981) MGI PMID:15598981 MGI:MGI:3526784 NCBI chrNW_004955578:636,298...661,566
Ensembl chrNW_004955578:636,282...661,566
JBrowse link
G Pak3 p21 (RAC1) activated kinase 3 ISO (MGI:MGI:4940954|PMID:21115725) UniProtKB PMID:21115725 MGI:MGI:4940954 NCBI chrNW_004955490:4,538,933...4,833,851
Ensembl chrNW_004955490:4,545,457...4,662,862
JBrowse link
G Pax6 paired box 6 ISO (MGI:MGI:3513567|PMID:15514979) MGI PMID:15514979 MGI:MGI:3513567 NCBI chrNW_004955476:10,058,979...10,074,668
Ensembl chrNW_004955476:10,058,961...10,074,162
JBrowse link
G Picalm phosphatidylinositol binding clathrin assembly protein ISO PMID:18842885
(MGI:MGI:4418607|PMID:18842885)
BHF-UCL PMID:18842885 MGI:MGI:4418607, RGD:8554167 NCBI chrNW_004955414:6,871,220...6,970,569
Ensembl chrNW_004955414:6,871,520...6,969,208
JBrowse link
G Pip5k1c phosphatidylinositol-4-phosphate 5-kinase type 1 gamma ISO (MGI:MGI:3037391|PMID:14741049) MGI PMID:14741049 MGI:MGI:3037391 NCBI chrNW_004955495:5,573,549...5,616,957
Ensembl chrNW_004955495:5,573,549...5,617,847
JBrowse link
G Pitpna phosphatidylinositol transfer protein alpha ISO (MGI:MGI:4839451|PMID:16244667) BHF-UCL PMID:16244667 MGI:MGI:4839451 NCBI chrNW_004955481:1,611,579...1,649,481
Ensembl chrNW_004955481:1,611,830...1,645,753
JBrowse link
G Plppr4 phospholipid phosphatase related 4 ISO RGD PMID:12730698 RGD:1299556 NCBI chrNW_004955435:4,085,918...4,112,207
Ensembl chrNW_004955435:4,091,165...4,114,376
JBrowse link
G Pou4f2 POU class 4 homeobox 2 ISO (MGI:MGI:2429619|PMID:10357904) MGI PMID:10357904 MGI:MGI:2429619 NCBI chrNW_004955428:2,325,775...2,329,122
Ensembl chrNW_004955428:2,324,834...2,329,205
JBrowse link
G Ptpn11 protein tyrosine phosphatase non-receptor type 11 ISO (MGI:MGI:2447085|PMID:12482708) MGI PMID:12482708 MGI:MGI:2447085 NCBI chrNW_004955482:8,934,734...9,031,230
Ensembl chrNW_004955482:8,934,306...9,035,203
JBrowse link
G Ptprz1 protein tyrosine phosphatase receptor type Z1 ISO (MGI:MGI:1336768|PMID:10234020), (MGI:MGI:2665215|PMID:12700241) MGI PMID:10234020, PMID:12700241 MGI:MGI:1336768, MGI:MGI:2665215 NCBI chrNW_004955479:3,611,658...3,734,225
Ensembl chrNW_004955479:3,624,993...3,733,183
JBrowse link
G Rab10 RAB10, member RAS oncogene family ISO PMID:21856246 UniProt PMID:21856246 RGD:8553614 NCBI chrNW_004955469:8,057,235...8,138,983
Ensembl chrNW_004955469:8,057,235...8,138,983
JBrowse link
G Rab3a RAB3A, member RAS oncogene family ISO (MGI:MGI:3762126|PMID:11359932) MGI PMID:11359932 MGI:MGI:3762126 NCBI chrNW_004955524:3,220,108...3,224,376
Ensembl chrNW_004955524:3,221,366...3,224,376
JBrowse link
G Rab8a RAB8A, member RAS oncogene family ISO PMID:21856246 UniProt PMID:21856246 RGD:8553614 NCBI chrNW_004955524:1,403,811...1,416,005
Ensembl chrNW_004955524:1,403,811...1,416,005
JBrowse link
G Rnf165 ring finger protein 165 ISO (MGI:MGI:5499270|PMID:23610558) MGI PMID:23610558 MGI:MGI:5499270 NCBI chrNW_004955402:31,867,651...31,975,930
Ensembl chrNW_004955402:31,867,645...31,969,804
JBrowse link
G Rtn4r reticulon 4 receptor ISO (MGI:MGI:1933685|PMID:11201742) MGI PMID:11201742 MGI:MGI:1933685 NCBI chrNW_004955442:17,866,508...17,891,803
Ensembl chrNW_004955442:17,866,398...17,891,820
JBrowse link
G Ryk receptor like tyrosine kinase ISO (MGI:MGI:3510085|PMID:15454084) MGI PMID:15454084 MGI:MGI:3510085 NCBI chrNW_004955501:4,360,051...4,419,083
Ensembl chrNW_004955501:4,328,682...4,419,307
JBrowse link
G Sema4a semaphorin 4A ISO (MGI:MGI:5315684|PMID:20043131) UniProtKB PMID:20043131 MGI:MGI:5315684 NCBI chrNW_004955545:2,316,402...2,341,873
Ensembl chrNW_004955545:2,316,390...2,342,233
JBrowse link
G Shtn1 shootin 1 ISO PMID:17030985
PMID:17439943
MGI
HGNC
PMID:17030985, PMID:17439943 RGD:8554246, RGD:8554472 NCBI chrNW_004955431:21,653,415...21,734,160
Ensembl chrNW_004955431:21,653,415...21,734,426
JBrowse link
G Slit1 slit guidance ligand 1 ISO (MGI:MGI:3626138|PMID:12097499) MGI PMID:12097499 MGI:MGI:3626138 NCBI chrNW_004955507:3,204,135...3,365,319
Ensembl chrNW_004955507:3,201,556...3,365,471
JBrowse link
G Slit2 slit guidance ligand 2 ISO (MGI:MGI:3626138|PMID:12097499) MGI PMID:12097499 MGI:MGI:3626138 NCBI chrNW_004955480:3,982,977...4,314,160
Ensembl chrNW_004955480:3,984,586...4,313,908
JBrowse link
G Slitrk1 SLIT and NTRK like family member 1 ISO (MGI:MGI:2677606|PMID:14550773) MGI PMID:14550773 MGI:MGI:2677606 NCBI chrNW_004955404:24,436,394...24,439,749
Ensembl chrNW_004955404:24,437,299...24,439,389
JBrowse link
G Slitrk2 SLIT and NTRK like family member 2 ISO (MGI:MGI:2677606|PMID:14550773) MGI PMID:14550773 MGI:MGI:2677606 NCBI chrNW_004955585:479,798...488,046
Ensembl chrNW_004955585:479,798...486,363
JBrowse link
G Slitrk3 SLIT and NTRK like family member 3 ISO (MGI:MGI:2677606|PMID:14550773) MGI PMID:14550773 MGI:MGI:2677606 NCBI chrNW_004955448:14,846,976...14,852,612
Ensembl chrNW_004955448:14,846,976...14,852,612
JBrowse link
G Slitrk4 SLIT and NTRK like family member 4 ISO (MGI:MGI:2677606|PMID:14550773) MGI PMID:14550773 MGI:MGI:2677606 NCBI chrNW_004955539:1,929,681...1,942,525
Ensembl chrNW_004955539:1,929,681...1,942,525
JBrowse link
G Slitrk5 SLIT and NTRK like family member 5 ISO (MGI:MGI:2677606|PMID:14550773) MGI PMID:14550773 MGI:MGI:2677606 NCBI chrNW_004955404:21,342,379...21,350,803
Ensembl chrNW_004955404:21,342,379...21,350,464
JBrowse link
G Slitrk6 SLIT and NTRK like family member 6 ISO (MGI:MGI:2677606|PMID:14550773) MGI PMID:14550773 MGI:MGI:2677606 NCBI chrNW_004955404:22,738,080...22,744,601
Ensembl chrNW_004955404:22,737,974...22,745,046
JBrowse link
G Snap25 synaptosome associated protein 25 ISO RGD PMID:15478103 RGD:1581079 NCBI chrNW_004955415:20,133,361...20,218,840
Ensembl chrNW_004955415:20,133,201...20,219,023
JBrowse link
G Snap91 synaptosome associated protein 91 ISO PMID:18842885 BHF-UCL PMID:18842885 RGD:8554167 NCBI chrNW_004955411:11,175,587...11,301,145
Ensembl chrNW_004955411:11,175,525...11,300,950
JBrowse link
G Sptbn4 spectrin beta, non-erythrocytic 4 ISO (MGI:MGI:60062|PMID:1634998) MGI PMID:1634998 MGI:MGI:60062 NCBI chrNW_004955578:730,916...813,740
Ensembl chrNW_004955578:731,814...810,065
JBrowse link
G Stk11 serine/threonine kinase 11 ISO (MGI:MGI:4462353|PMID:17482548) UniProtKB
RGD
PMID:12114407, PMID:17482548 MGI:MGI:4462353, RGD:2291948 NCBI chrNW_004955495:6,678,195...6,699,408
Ensembl chrNW_004955495:6,678,195...6,699,058
JBrowse link
G Stmn1 stathmin 1 ISO (MGI:MGI:2158550|PMID:11839567) MGI PMID:11839567 MGI:MGI:2158550 NCBI chrNW_004955452:5,387,696...5,393,337
Ensembl chrNW_004955452:5,388,150...5,391,518
JBrowse link
G Taok2 TAO kinase 2 ISO (MGI:MGI:5462161|PMID:22683681)
(PMID:22683681)
ARUK-UCL PMID:22683681 MGI:MGI:5462161 NCBI chrNW_004955493:6,968,537...6,986,608
Ensembl chrNW_004955493:6,969,096...6,985,878
JBrowse link
G Tbce tubulin folding cofactor E ISO (MGI:MGI:2446402|PMID:12446740) MGI PMID:12446740 MGI:MGI:2446402 NCBI chrNW_004955492:4,502,705...4,573,126 JBrowse link
G Tnn tenascin N ISO (MGI:MGI:2664472|PMID:12812753) MGI PMID:12812753 MGI:MGI:2664472 NCBI chrNW_004955406:14,882,414...14,950,572
Ensembl chrNW_004955406:14,882,245...14,950,587
JBrowse link
G Top2b DNA topoisomerase II beta ISO (MGI:MGI:2178151|PMID:10615047) MGI PMID:10615047 MGI:MGI:2178151 NCBI chrNW_004955430:17,457,603...17,523,115
Ensembl chrNW_004955430:17,457,603...17,507,012
JBrowse link
G Trim46 tripartite motif containing 46 ISO (MGI:MGI:5708763|PMID:26671463) MGI PMID:26671463 MGI:MGI:5708763 NCBI chrNW_004955545:1,646,244...1,656,825
Ensembl chrNW_004955545:1,646,244...1,656,825
JBrowse link
G Uchl1 ubiquitin C-terminal hydrolase L1 ISO (MGI:MGI:50250|PMID:1630580) MGI PMID:1630580 MGI:MGI:50250 NCBI chrNW_004955443:6,367,519...6,379,638
Ensembl chrNW_004955443:6,367,460...6,380,462
JBrowse link
G Ulk1 unc-51 like autophagy activating kinase 1 ISO (MGI:MGI:3037621|PMID:15014045) MGI PMID:15014045 MGI:MGI:3037621 NCBI chrNW_004955482:760,200...777,133
Ensembl chrNW_004955482:761,811...777,133
JBrowse link
G Vax2 ventral anterior homeobox 2 ISO (MGI:MGI:2157790|PMID:11830579) MGI PMID:11830579 MGI:MGI:2157790 NCBI chrNW_004955424:14,283,336...14,309,809
Ensembl chrNW_004955424:14,283,327...14,309,809
JBrowse link
G Wnt3a Wnt family member 3A ISO (MGI:MGI:3510085|PMID:15454084) MGI PMID:15454084 MGI:MGI:3510085 NCBI chrNW_004955581:351,375...382,541
Ensembl chrNW_004955581:350,889...382,541
JBrowse link
G Wnt5a Wnt family member 5A ISO (MGI:MGI:5707582|PMID:23517308) ParkinsonsUK-UCL PMID:23517308 MGI:MGI:5707582 NCBI chrNW_004955430:5,304,817...5,325,684
Ensembl chrNW_004955430:5,304,745...5,325,684
JBrowse link
G Zdhhc17 zinc finger DHHC-type palmitoyltransferase 17 ISO (MGI:MGI:5775247|PMID:26232532) UniProt PMID:26232532 MGI:MGI:5775247 NCBI chrNW_004955405:15,915,756...15,997,777
Ensembl chrNW_004955405:15,915,756...15,997,777
JBrowse link
axonogenesis involved in innervation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Col25a1 collagen type XXV alpha 1 chain ISO (MGI:MGI:5553181|PMID:24453327) MGI PMID:24453327 MGI:MGI:5553181 NCBI chrNW_004955496:839,474...1,255,107
Ensembl chrNW_004955496:839,561...1,250,614
JBrowse link
G Fgfr3 fibroblast growth factor receptor 3 ISO (MGI:MGI:3714212|PMID:17557302) MGI PMID:17557302 MGI:MGI:3714212 NCBI chrNW_004955514:1,030,244...1,038,590
Ensembl chrNW_004955514:1,025,600...1,038,590
JBrowse link
G Itga4 integrin subunit alpha 4 ISO RGD PMID:16181811 RGD:13593536 NCBI chrNW_004955403:15,726,296...15,807,055
Ensembl chrNW_004955403:15,723,785...15,807,111
JBrowse link
G Nptx1 neuronal pentraxin 1 ISO (MGI:MGI:3626127|PMID:16763034) MGI PMID:16763034 MGI:MGI:3626127 NCBI chrNW_004955506:2,447,429...2,456,612
Ensembl chrNW_004955506:2,447,109...2,456,965
JBrowse link
G Nrp1 neuropilin 1 ISO (MGI:MGI:5437554|PMID:22790009) BHF-UCL PMID:22790009 MGI:MGI:5437554 NCBI chrNW_004955462:4,101,997...4,241,012
Ensembl chrNW_004955462:4,101,999...4,241,012
JBrowse link
G Ntrk1 neurotrophic receptor tyrosine kinase 1 ISO (MGI:MGI:83009|PMID:8815902) UniProtKB PMID:8815902 MGI:MGI:83009 NCBI chrNW_004955545:2,929,704...2,947,579
Ensembl chrNW_004955545:2,929,704...2,947,579
JBrowse link
G Sema3a semaphorin 3A ISO (MGI:MGI:5437554|PMID:22790009) BHF-UCL PMID:22790009 MGI:MGI:5437554 NCBI chrNW_004955410:2,146,088...2,344,342
Ensembl chrNW_004955410:2,144,388...2,338,973
JBrowse link
basal dendrite arborization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nrp1 neuropilin 1 ISO (MGI:MGI:5462161|PMID:22683681) ARUK-UCL PMID:22683681 MGI:MGI:5462161 NCBI chrNW_004955462:4,101,997...4,241,012
Ensembl chrNW_004955462:4,101,999...4,241,012
JBrowse link
G Sema3a semaphorin 3A ISO (MGI:MGI:5462161|PMID:22683681) ARUK-UCL PMID:22683681 MGI:MGI:5462161 NCBI chrNW_004955410:2,146,088...2,344,342
Ensembl chrNW_004955410:2,144,388...2,338,973
JBrowse link
G Taok2 TAO kinase 2 ISO (MGI:MGI:5462161|PMID:22683681) ARUK-UCL PMID:22683681 MGI:MGI:5462161, RGD:13461760 NCBI chrNW_004955493:6,968,537...6,986,608
Ensembl chrNW_004955493:6,969,096...6,985,878
JBrowse link
basal dendrite development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nrp1 neuropilin 1 ISO (MGI:MGI:5462161|PMID:22683681) ARUK-UCL PMID:22683681 MGI:MGI:5462161 NCBI chrNW_004955462:4,101,997...4,241,012
Ensembl chrNW_004955462:4,101,999...4,241,012
JBrowse link
basal dendrite morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Taok2 TAO kinase 2 ISO (MGI:MGI:5462161|PMID:22683681) ARUK-UCL PMID:22683681 MGI:MGI:5462161, RGD:13461760 NCBI chrNW_004955493:6,968,537...6,986,608
Ensembl chrNW_004955493:6,969,096...6,985,878
JBrowse link
branchiomotor neuron axon guidance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mycbp2 MYC binding protein 2 ISO (MGI:MGI:3776727|PMID:18031680) MGI PMID:18031680 MGI:MGI:3776727 NCBI chrNW_004955404:29,932,125...30,186,236
Ensembl chrNW_004955404:29,932,125...30,186,236
JBrowse link
G Nrp1 neuropilin 1 ISO (MGI:MGI:3822054|PMID:18804103) ParkinsonsUK-UCL PMID:18804103 MGI:MGI:3822054 NCBI chrNW_004955462:4,101,997...4,241,012
Ensembl chrNW_004955462:4,101,999...4,241,012
JBrowse link
G Plxna3 plexin A3 ISO (MGI:MGI:3822054|PMID:18804103) ParkinsonsUK-UCL PMID:18804103 MGI:MGI:3822054 NCBI chrNW_004955580:958,033...972,123
Ensembl chrNW_004955580:957,860...972,772
JBrowse link
G Plxna4 plexin A4 ISO (MGI:MGI:3822054|PMID:18804103) ParkinsonsUK-UCL PMID:18804103 MGI:MGI:3822054 NCBI chrNW_004955410:35,281,042...35,714,094
Ensembl chrNW_004955410:35,281,648...35,713,453
JBrowse link
G Sema3a semaphorin 3A ISO (MGI:MGI:3822054|PMID:18804103) ParkinsonsUK-UCL PMID:18804103 MGI:MGI:3822054 NCBI chrNW_004955410:2,146,088...2,344,342
Ensembl chrNW_004955410:2,144,388...2,338,973
JBrowse link
G Sema3f semaphorin 3F ISO (MGI:MGI:3822054|PMID:18804103) ParkinsonsUK-UCL PMID:18804103 MGI:MGI:3822054 NCBI chrNW_004955532:1,992,417...2,015,879
Ensembl chrNW_004955532:1,988,486...2,017,170
JBrowse link
Cajal-Retzius cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Psen1 presenilin 1 ISO (MGI:MGI:3603707|PMID:15548218) MGI PMID:15548218 MGI:MGI:3603707 NCBI chrNW_004955523:2,128,529...2,210,737
Ensembl chrNW_004955523:2,128,529...2,210,737
JBrowse link
camera-type eye photoreceptor cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Prom1 prominin 1 ISO (PMID:18654668)
(MGI:MGI:3838023|PMID:19228982)
BHF-UCL
UniProtKB
PMID:18654668, PMID:19228982 MGI:MGI:3838023 NCBI chrNW_004955480:7,955,501...8,059,537
Ensembl chrNW_004955480:7,961,389...8,059,589
JBrowse link
G Rom1 retinal outer segment membrane protein 1 ISO (MGI:MGI:4437581|PMID:20300562) MGI PMID:20300562 MGI:MGI:4437581 NCBI chrNW_004955599:578,165...580,055
Ensembl chrNW_004955599:573,426...579,812
JBrowse link
G Sdk2 sidekick cell adhesion molecule 2 ISO (MGI:MGI:5693671|PMID:26287463) UniProtKB PMID:26287463 MGI:MGI:5693671 NCBI chrNW_004955553:353,190...614,806
Ensembl chrNW_004955553:357,112...614,811
JBrowse link
G Slc4a7 solute carrier family 4 member 7 ISO (MGI:MGI:2680888|PMID:12808454) MGI PMID:12808454 MGI:MGI:2680888 NCBI chrNW_004955430:18,991,615...19,059,590
Ensembl chrNW_004955430:18,991,301...19,067,754
JBrowse link
G Ttc8 tetratricopeptide repeat domain 8 ISO (MGI:MGI:5014119|PMID:21646512) MGI PMID:21646512 MGI:MGI:5014119 NCBI chrNW_004955438:11,410,196...11,466,044
Ensembl chrNW_004955438:11,409,982...11,466,523
JBrowse link
camera-type eye photoreceptor cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ihh Indian hedgehog signaling molecule ISO (MGI:MGI:3807419|PMID:18582859) MGI PMID:18582859 MGI:MGI:3807419 NCBI chrNW_004955453:14,376,665...14,382,536
Ensembl chrNW_004955453:14,376,718...14,381,747
JBrowse link
canonical Wnt signaling pathway involved in midbrain dopaminergic neuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Wnt1 Wnt family member 1 ISO (MGI:MGI:5705221|PMID:19951692) ParkinsonsUK-UCL PMID:19951692 MGI:MGI:5705221 NCBI chrNW_004955500:7,797,063...7,811,142
Ensembl chrNW_004955500:7,797,060...7,811,167
JBrowse link
G Wnt2 Wnt family member 2 ISO (PMID:20018874) ParkinsonsUK-UCL PMID:20018874 NCBI chrNW_004955432:22,988,208...23,024,530
Ensembl chrNW_004955432:22,984,170...23,027,705
JBrowse link
cardiac neuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Vcam1 vascular cell adhesion molecule 1 ISO RGD PMID:12486170 RGD:628409 NCBI chrNW_004955435:5,390,745...5,410,025
Ensembl chrNW_004955435:5,390,751...5,411,691
JBrowse link
cell morphogenesis involved in neuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxg1 forkhead box G1 ISO (MGI:MGI:3654570|PMID:16691564) MGI PMID:16691564 MGI:MGI:3654570 NCBI chrNW_004955409:31,672,960...31,674,970 JBrowse link
G Hes1 hes family bHLH transcription factor 1 ISO (MGI:MGI:2149154|PMID:11500373) MGI PMID:11500373 MGI:MGI:2149154 NCBI chrNW_004955420:14,565,921...14,568,447
Ensembl chrNW_004955420:14,564,283...14,568,447
JBrowse link
G Hexa hexosaminidase subunit alpha ISO (MGI:MGI:3033296|PMID:14972652) MGI PMID:14972652 MGI:MGI:3033296 NCBI chrNW_004955450:4,790,342...4,806,862 JBrowse link
G Id2 inhibitor of DNA binding 2 ISO (MGI:MGI:5487734|PMID:23264561) MGI PMID:23264561 MGI:MGI:5487734 NCBI chrNW_004955487:878,326...880,783
Ensembl chrNW_004955487:878,326...880,783
JBrowse link
G Mef2c myocyte enhancer factor 2C ISO (MGI:MGI:3804505|PMID:18599437) Alzheimers_University_of_Toronto PMID:18599437 MGI:MGI:3804505 NCBI chrNW_004955418:22,537,388...22,701,434
Ensembl chrNW_004955418:22,537,285...22,701,434
JBrowse link
G Mnx1 motor neuron and pancreas homeobox 1 ISO (MGI:MGI:1344237|PMID:10482234) MGI PMID:10482234 MGI:MGI:1344237 NCBI chrNW_004955579:51,862...74,985 JBrowse link
G Mycbp2 MYC binding protein 2 ISO (MGI:MGI:3776727|PMID:18031680) MGI PMID:18031680 MGI:MGI:3776727 NCBI chrNW_004955404:29,932,125...30,186,236
Ensembl chrNW_004955404:29,932,125...30,186,236
JBrowse link
G Ophn1 oligophrenin 1 ISO (PMID:27160703) ARUK-UCL PMID:27160703 NCBI chrNW_004955475:7,576,629...8,019,132
Ensembl chrNW_004955475:7,581,675...8,018,139
JBrowse link
G Rb1 RB transcriptional corepressor 1 ISO (MGI:MGI:3664376|PMID:7958874) MGI PMID:7958874 MGI:MGI:3664376 NCBI chrNW_004955431:1,960,765...2,124,576
Ensembl chrNW_004955431:1,960,661...2,124,576
JBrowse link
G Slc1a3 solute carrier family 1 member 3 ISO (MGI:MGI:1202024|PMID:9753165) MGI PMID:9753165 MGI:MGI:1202024 NCBI chrNW_004955426:21,371,985...21,450,749
Ensembl chrNW_004955426:21,371,985...21,451,069
JBrowse link
G Spr sepiapterin reductase ISO (MGI:MGI:3722569|PMID:16532389) MGI PMID:16532389 MGI:MGI:3722569 NCBI chrNW_004955424:12,711,064...12,716,000
Ensembl chrNW_004955424:12,711,064...12,716,000
JBrowse link
G Tbcd tubulin folding cofactor D ISO (PMID:27666374) UniProtKB PMID:27666374 NCBI chrNW_004955506:273,769...434,205
Ensembl chrNW_004955506:273,954...434,973
JBrowse link
G Unk unk zinc finger ISO (PMID:25737280)
(MGI:MGI:5630004|PMID:25737280)
UniProtKB
MGI
PMID:25737280 MGI:MGI:5630004 NCBI chrNW_004955506:6,424,638...6,470,406
Ensembl chrNW_004955506:6,424,638...6,470,874
JBrowse link
central nervous system interneuron axonogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tctn1 tectonic family member 1 ISO (MGI:MGI:3610767|PMID:16357211) MGI PMID:16357211 MGI:MGI:3610767 NCBI chrNW_004955482:7,504,554...7,533,605
Ensembl chrNW_004955482:7,504,532...7,528,542
JBrowse link
central nervous system neuron axonogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arhgap35 Rho GTPase activating protein 35 ISO (MGI:MGI:1933687|PMID:11283609) UniProtKB PMID:11283609 MGI:MGI:1933687 NCBI chrNW_004955574:915,604...984,744
Ensembl chrNW_004955574:915,325...984,744
JBrowse link
G Arhgef28 Rho guanine nucleotide exchange factor 28 ISO (MGI:MGI:3056242|PMID:15378065) MGI PMID:15378065 MGI:MGI:3056242 NCBI chrNW_004955425:26,690,863...26,987,900
Ensembl chrNW_004955425:26,690,681...26,989,187
JBrowse link
G Atg7 autophagy related 7 ISO (MGI:MGI:4829568|PMID:20577052) MGI PMID:20577052 MGI:MGI:4829568 NCBI chrNW_004955429:14,076,976...14,301,034
Ensembl chrNW_004955429:14,076,960...14,304,236
JBrowse link
G B4galt5 beta-1,4-galactosyltransferase 5 ISO (MGI:MGI:6196231|PMID:30114188) UniProt PMID:30114188 MGI:MGI:6196231 NCBI chrNW_004955445:8,471,684...8,559,672
Ensembl chrNW_004955445:8,534,220...8,559,672
JBrowse link
G B4galt6 beta-1,4-galactosyltransferase 6 ISO (MGI:MGI:6196231|PMID:30114188) UniProt PMID:30114188 MGI:MGI:6196231 NCBI chrNW_004955402:18,945,013...19,024,132
Ensembl chrNW_004955402:18,942,872...19,024,132
JBrowse link
G Chrnb2 cholinergic receptor nicotinic beta 2 subunit ISO (MGI:MGI:3721829|PMID:12097474) MGI PMID:12097474 MGI:MGI:3721829 NCBI chrNW_004955545:1,065,457...1,077,056
Ensembl chrNW_004955545:1,065,457...1,077,526
JBrowse link
G Hsp90aa1 heat shock protein 90 alpha family class A member 1 ISO (MGI:MGI:6148478|PMID:24286867) ARUK-UCL PMID:24286867 MGI:MGI:6148478 NCBI chrNW_004955538:1,469,544...1,475,010 JBrowse link
G Hsp90ab1 heat shock protein 90 alpha family class B member 1 ISO (MGI:MGI:6148478|PMID:24286867) ARUK-UCL PMID:24286867 MGI:MGI:6148478 NCBI chrNW_004955437:9,872,649...9,878,459
Ensembl chrNW_004955437:9,873,908...9,878,459
JBrowse link
G Ndel1 nudE neurodevelopment protein 1 like 1 ISO (MGI:MGI:3047464|PMID:15208636) MGI PMID:15208636 MGI:MGI:3047464 NCBI chrNW_004955467:8,432,806...8,486,563
Ensembl chrNW_004955467:8,432,806...8,468,155
JBrowse link
G Prkca protein kinase C alpha ISO RGD PMID:18062921 RGD:2293300 NCBI chrNW_004955478:5,686,639...6,090,356
Ensembl chrNW_004955478:5,686,640...6,083,967
JBrowse link
G Pten phosphatase and tensin homolog ISO (MGI:MGI:3629385|PMID:16675393) BHF-UCL PMID:16675393 MGI:MGI:3629385 NCBI chrNW_004955425:5,007,811...5,091,829
Ensembl chrNW_004955425:5,014,147...5,091,829
JBrowse link
G Ptk2 protein tyrosine kinase 2 ISO (MGI:MGI:3056242|PMID:15378065) MGI PMID:15378065 MGI:MGI:3056242 NCBI chrNW_004955461:14,337,914...14,622,779
Ensembl chrNW_004955461:14,337,914...14,556,931
JBrowse link
central nervous system neuron development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agbl4 ATP/GTP binding protein like 4 ISO (MGI:MGI:6269036|PMID:30420556) MGI PMID:30420556 MGI:MGI:6269036 NCBI chrNW_004955464:8,847,401...10,195,184
Ensembl chrNW_004955464:8,880,455...10,193,907
JBrowse link
G Ascl1 achaete-scute family bHLH transcription factor 1 ISO (MGI:MGI:3639051|PMID:16469766)
(MGI:MGI:3615742|PMID:15169849)
MGI PMID:15169849, PMID:16469766 MGI:MGI:3615742, MGI:MGI:3639051 NCBI chrNW_004955405:37,941,243...37,943,641
Ensembl chrNW_004955405:37,941,243...37,943,641
JBrowse link
G Atp7a ATPase copper transporting alpha ISO (MGI:MGI:65000|PMID:8174230) MGI PMID:8174230 MGI:MGI:65000 NCBI chrNW_004955557:1,355,471...1,515,725
Ensembl chrNW_004955557:1,355,397...1,515,393
JBrowse link
G Btg2 BTG anti-proliferation factor 2 ISO (MGI:MGI:4418391|PMID:20020054) MGI PMID:20020054 MGI:MGI:4418391 NCBI chrNW_004955406:39,303,221...39,307,308
Ensembl chrNW_004955406:39,303,175...39,308,778
JBrowse link
G Cdk5 cyclin dependent kinase 5 ISO (MGI:MGI:1889058|PMID:8855328) MGI PMID:8855328 MGI:MGI:1889058 NCBI chrNW_004955491:5,491,744...5,497,280
Ensembl chrNW_004955491:5,491,744...5,497,280
JBrowse link
G Fgf8 fibroblast growth factor 8 ISO development of dopaminergic neurons in the midbrain and serotonergic neurons in the rostral hindbrain RGD PMID:9630220 RGD:2289424 NCBI chrNW_004955485:8,517,412...8,521,732
Ensembl chrNW_004955485:8,517,412...8,521,770
JBrowse link
G Fgfr1 fibroblast growth factor receptor 1 ISO RGD PMID:17314281 RGD:2325182 NCBI chrNW_004955463:14,013,247...14,064,354
Ensembl chrNW_004955463:14,013,247...14,064,111
JBrowse link
G Foxg1 forkhead box G1 ISO (MGI:MGI:3639840|PMID:16680166) MGI PMID:16680166 MGI:MGI:3639840 NCBI chrNW_004955409:31,672,960...31,674,970 JBrowse link
G Gabrb1 gamma-aminobutyric acid type A receptor beta1 subunit ISO RGD PMID:15158077 RGD:6480239 NCBI chrNW_004955443:1,126,223...1,514,291
Ensembl chrNW_004955443:1,132,860...1,514,376
JBrowse link
G Gata2 GATA binding protein 2 ISO (MGI:MGI:1339230|PMID:10357893) MGI PMID:10357893 MGI:MGI:1339230 NCBI chrNW_004955429:15,326,551...15,334,774
Ensembl chrNW_004955429:15,327,113...15,336,460
JBrowse link
G Gba2 glucosylceramidase beta 2 ISO (PMID:23332916) UniProtKB PMID:23332916 NCBI chrNW_004955472:553,556...564,411
Ensembl chrNW_004955472:553,556...564,411
JBrowse link
G Hprt1 hypoxanthine phosphoribosyltransferase 1 ISO (MGI:MGI:1321418|PMID:9886073) MGI PMID:9886073 MGI:MGI:1321418 NCBI chrNW_004955473:462,940...510,006 JBrowse link
G Lep leptin ISO (MGI:MGI:1351081|PMID:10592285) MGI PMID:10592285 MGI:MGI:1351081 NCBI chrNW_004955479:9,266,604...9,276,568
Ensembl chrNW_004955479:9,274,516...9,279,472
JBrowse link
G Lingo1 leucine rich repeat and Ig domain containing 1 ISO (MGI:MGI:3722980|PMID:17726113) MGI PMID:17726113 MGI:MGI:3722980 NCBI chrNW_004955450:2,435,768...2,493,387
Ensembl chrNW_004955450:2,435,662...2,452,213
JBrowse link
G Lmx1b LIM homeobox transcription factor 1 beta ISO (MGI:MGI:3694852|PMID:17151281) MGI PMID:17151281 MGI:MGI:3694852 NCBI chrNW_004955419:1,782,566...1,857,375
Ensembl chrNW_004955419:1,782,566...1,857,375
JBrowse link
G Map2 microtubule associated protein 2 ISO (PMID:20846339) DFLAT PMID:20846339 NCBI chrNW_004955457:5,678,826...5,816,114
Ensembl chrNW_004955457:5,678,436...5,875,024
JBrowse link
G Neurog2 neurogenin 2 ISO (MGI:MGI:3612224|PMID:16410412) MGI PMID:16410412 MGI:MGI:3612224 NCBI chrNW_004955457:14,268,078...14,287,050 JBrowse link
G Npy neuropeptide Y ISO (PMID:20846339) DFLAT PMID:20846339 NCBI chrNW_004955410:26,348,388...26,355,232
Ensembl chrNW_004955410:26,348,504...26,355,297
JBrowse link
G Ntrk2 neurotrophic receptor tyrosine kinase 2 ISO (MGI:MGI:1343962|PMID:8402890) UniProtKB PMID:8402890 MGI:MGI:1343962 NCBI chrNW_004955432:2,284,283...2,629,631
Ensembl chrNW_004955432:2,288,898...2,630,878
JBrowse link
G Ttc36 tetratricopeptide repeat domain 36 ISO (MGI:MGI:6362140|PMID:31537781) MGI PMID:31537781 MGI:MGI:6362140 NCBI chrNW_004955412:19,670,590...19,672,495 JBrowse link
central nervous system neuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl11b BAF chromatin remodeling complex subunit BCL11B ISO (MGI:MGI:3790890|PMID:18215621) MGI PMID:18215621 MGI:MGI:3790890 NCBI chrNW_004955438:20,562,345...20,637,662
Ensembl chrNW_004955438:20,564,449...20,637,103
JBrowse link
G Cacna1a calcium voltage-gated channel subunit alpha1 A ISO (MGI:MGI:55090|PMID:6945603) MGI PMID:6945603 MGI:MGI:55090 NCBI chrNW_004955415:32,182,536...32,457,511
Ensembl chrNW_004955415:32,183,442...32,400,595
JBrowse link
G Hoxa1 homeobox A1 ISO (MGI:MGI:1306866|PMID:9806922) MGI PMID:9806922 MGI:MGI:1306866 NCBI chrNW_004955410:28,788,245...28,790,971
Ensembl chrNW_004955410:28,787,817...28,790,962
JBrowse link
G Lmx1a LIM homeobox transcription factor 1 alpha ISO (MGI:MGI:3721195|PMID:17670789) MGI PMID:17670789 MGI:MGI:3721195 NCBI chrNW_004955462:11,328,583...11,484,438
Ensembl chrNW_004955462:11,329,676...11,477,770
JBrowse link
G Met MET proto-oncogene, receptor tyrosine kinase ISO RGD PMID:18262389 RGD:2317458 NCBI chrNW_004955432:22,440,671...22,519,592
Ensembl chrNW_004955432:22,440,637...22,517,647
JBrowse link
G Mnx1 motor neuron and pancreas homeobox 1 ISO (MGI:MGI:1344237|PMID:10482234) MGI PMID:10482234 MGI:MGI:1344237 NCBI chrNW_004955579:51,862...74,985 JBrowse link
G Nkx6-1 NK6 homeobox 1 ISO (MGI:MGI:4360136|PMID:19592574) MGI PMID:19592574 MGI:MGI:4360136 NCBI chrNW_004955474:5,211,281...5,214,785 JBrowse link
G Nr4a2 nuclear receptor subfamily 4 group A member 2 ISO (MGI:MGI:1928583|PMID:11113533) MGI PMID:11113533 MGI:MGI:1928583 NCBI chrNW_004955449:16,928,780...16,944,536
Ensembl chrNW_004955449:16,937,794...16,945,731
JBrowse link
G Pou4f1 POU class 4 homeobox 1 ISO (MGI:MGI:83320|PMID:8876243)
(MGI:MGI:84546|PMID:8955272)
MGI PMID:8876243, PMID:8955272 MGI:MGI:83320, MGI:MGI:84546 NCBI chrNW_004955404:28,812,762...28,818,024 JBrowse link
G Smo smoothened, frizzled class receptor ISO (MGI:MGI:3624182|PMID:16571630) MGI PMID:16571630 MGI:MGI:3624182 NCBI chrNW_004955479:9,963,377...9,991,670
Ensembl chrNW_004955479:9,964,170...9,993,165
JBrowse link
G Sox5 SRY-box transcription factor 5 ISO (MGI:MGI:3790890|PMID:18215621) MGI PMID:18215621 MGI:MGI:3790890 NCBI chrNW_004955413:18,831,931...19,676,371
Ensembl chrNW_004955413:18,831,931...19,204,217
JBrowse link
G Spock1 SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1 ISO (PMID:10640720) UniProtKB PMID:10640720 NCBI chrNW_004955408:31,954,622...32,465,463
Ensembl chrNW_004955408:31,957,882...32,465,461
JBrowse link
G Tulp3 TUB like protein 3 ISO (MGI:MGI:3841503|PMID:19286674) MGI PMID:19286674 MGI:MGI:3841503 NCBI chrNW_004955429:18,424,912...18,484,522
Ensembl chrNW_004955429:18,453,311...18,482,400
JBrowse link
central nervous system projection neuron axonogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bhlhe22 basic helix-loop-helix family member e22 ISO (MGI:MGI:5315201|PMID:22284184) MGI PMID:22284184 MGI:MGI:5315201 NCBI chrNW_004955444:14,458,307...14,460,441 JBrowse link
G Chrnb2 cholinergic receptor nicotinic beta 2 subunit ISO (MGI:MGI:3527366|PMID:15608630)
(MGI:MGI:2181503|PMID:11344259), (MGI:MGI:2683795|PMID:14687550)
MGI PMID:11344259, PMID:14687550, PMID:15608630 MGI:MGI:2181503, MGI:MGI:2683795, MGI:MGI:3527366 NCBI chrNW_004955545:1,065,457...1,077,056
Ensembl chrNW_004955545:1,065,457...1,077,526
JBrowse link
G Dclk1 doublecortin like kinase 1 ISO (MGI:MGI:3614628|PMID:16387638) MGI PMID:16387638 MGI:MGI:3614628 NCBI chrNW_004955431:9,975,629...10,302,605
Ensembl chrNW_004955431:9,975,262...10,297,010
JBrowse link
G Dcx doublecortin ISO (MGI:MGI:3614628|PMID:16387638) MGI PMID:16387638 MGI:MGI:3614628 NCBI chrNW_004955490:4,354,307...4,469,055
Ensembl chrNW_004955490:4,354,307...4,469,055
JBrowse link
G Ephb1 EPH receptor B1 ISO (MGI:MGI:2675767|PMID:12971893) MGI PMID:12971893 MGI:MGI:2675767 NCBI chrNW_004955501:3,424,112...3,821,727
Ensembl chrNW_004955501:3,423,977...3,821,890
JBrowse link
G Ephb2 EPH receptor B2 ISO (MGI:MGI:2675767|PMID:12971893) MGI PMID:12971893 MGI:MGI:2675767 NCBI chrNW_004955452:2,844,713...2,986,790
Ensembl chrNW_004955452:2,844,713...2,980,445
JBrowse link
G Ephb3 EPH receptor B3 ISO (MGI:MGI:2675767|PMID:12971893) MGI PMID:12971893 MGI:MGI:2675767 NCBI chrNW_004955420:22,900,588...22,919,924
Ensembl chrNW_004955420:22,901,337...22,920,712
JBrowse link
G Mycbp2 MYC binding protein 2 ISO (MGI:MGI:3759703|PMID:17901218)
(MGI:MGI:3776727|PMID:18031680)
UniProtKB
MGI
PMID:17901218, PMID:18031680 MGI:MGI:3759703, MGI:MGI:3776727 NCBI chrNW_004955404:29,932,125...30,186,236
Ensembl chrNW_004955404:29,932,125...30,186,236
JBrowse link
G Nr4a2 nuclear receptor subfamily 4 group A member 2 ISO (MGI:MGI:1350702|PMID:10585298) MGI PMID:10585298 MGI:MGI:1350702 NCBI chrNW_004955449:16,928,780...16,944,536
Ensembl chrNW_004955449:16,937,794...16,945,731
JBrowse link
G Prdm8 PR/SET domain 8 ISO (MGI:MGI:5315201|PMID:22284184) MGI PMID:22284184 MGI:MGI:5315201 NCBI chrNW_004955433:4,443,339...4,463,687
Ensembl chrNW_004955433:4,459,669...4,462,928
JBrowse link
G Sptbn4 spectrin beta, non-erythrocytic 4 ISO (MGI:MGI:3708238|PMID:17197442) MGI PMID:17197442 MGI:MGI:3708238 NCBI chrNW_004955578:730,916...813,740
Ensembl chrNW_004955578:731,814...810,065
JBrowse link
cerebellar granule cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp2b2 ATPase plasma membrane Ca2+ transporting 2 ISO (MGI:MGI:1275896|PMID:9668038) MGI PMID:9668038 MGI:MGI:1275896 NCBI chrNW_004955561:1,727,935...1,851,907
Ensembl chrNW_004955561:1,727,935...1,851,907
JBrowse link
G Cbln1 cerebellin 1 precursor ISO (MGI:MGI:4839424|PMID:20537373) BHF-UCL PMID:20537373 MGI:MGI:4839424 NCBI chrNW_004955433:7,516,487...7,519,929
Ensembl chrNW_004955433:7,516,487...7,519,929
JBrowse link
G Grid2 glutamate ionotropic receptor delta type subunit 2 ISO (MGI:MGI:4839424|PMID:20537373) BHF-UCL PMID:20537373 MGI:MGI:4839424 NCBI chrNW_004955405:3,291,793...4,411,249
Ensembl chrNW_004955405:3,344,763...4,443,836
JBrowse link
G Kndc1 kinase non-catalytic C-lobe domain containing 1 ISO (MGI:MGI:3769586|PMID:17984326) MGI PMID:17984326 MGI:MGI:3769586 NCBI chrNW_004955477:10,792,066...10,850,457
Ensembl chrNW_004955477:10,792,394...10,850,186
JBrowse link
G Mtpn myotrophin ISO RGD PMID:8144589 RGD:632797 NCBI chrNW_004955494:6,805,518...6,844,454
Ensembl chrNW_004955494:6,805,262...6,845,394
JBrowse link
G Nfix nuclear factor I X ISO (MGI:MGI:5436217|PMID:21800304) MGI PMID:21800304 MGI:MGI:5436217 NCBI chrNW_004955415:32,055,926...32,121,611
Ensembl chrNW_004955415:32,055,375...32,117,833
JBrowse link
G Nrxn1 neurexin 1 ISO (MGI:MGI:4839424|PMID:20537373) BHF-UCL PMID:20537373 MGI:MGI:4839424 NCBI chrNW_004955441:16,230,977...17,178,003
Ensembl chrNW_004955441:16,234,070...17,178,005
JBrowse link
G Ophn1 oligophrenin 1 ISO (PMID:27160703) ARUK-UCL PMID:27160703 NCBI chrNW_004955475:7,576,629...8,019,132
Ensembl chrNW_004955475:7,581,675...8,018,139
JBrowse link
G Prox1 prospero homeobox 1 ISO (MGI:MGI:4849596|PMID:20808958) BHF-UCL PMID:20808958 MGI:MGI:4849596 NCBI chrNW_004955406:3,715,140...3,770,019
Ensembl chrNW_004955406:3,719,972...3,770,555
JBrowse link
G Top2a DNA topoisomerase II alpha ISO RGD PMID:11170002 RGD:8693630 NCBI chrNW_004955451:14,928,273...14,964,855
Ensembl chrNW_004955451:14,929,136...14,964,723
JBrowse link
G Ulk1 unc-51 like autophagy activating kinase 1 ISO (MGI:MGI:1351063|PMID:10624947) MGI PMID:10624947 MGI:MGI:1351063 NCBI chrNW_004955482:760,200...777,133
Ensembl chrNW_004955482:761,811...777,133
JBrowse link
G Wnt7a Wnt family member 7A ISO (MGI:MGI:1195230|PMID:9405095) MGI PMID:9405095 MGI:MGI:1195230 NCBI chrNW_004955429:12,647,993...12,693,998
Ensembl chrNW_004955429:12,647,993...12,694,895
JBrowse link
cerebellar neuron development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Crk CRK proto-oncogene, adaptor protein ISO (MGI:MGI:3822695|PMID:19074029) MGI PMID:19074029 MGI:MGI:3822695 NCBI chrNW_004955481:1,705,595...1,748,363
Ensembl chrNW_004955481:1,705,520...1,734,859
JBrowse link
G Crkl CRK like proto-oncogene, adaptor protein ISO (MGI:MGI:3822695|PMID:19074029) MGI PMID:19074029 MGI:MGI:3822695 NCBI chrNW_004955442:19,358,202...19,388,552
Ensembl chrNW_004955442:19,358,081...19,388,815
JBrowse link
G Nanos1 nanos C2HC-type zinc finger 1 ISO (MGI:MGI:5703669|PMID:26609159) MGI PMID:26609159 MGI:MGI:5703669 NCBI chrNW_004955431:23,538,224...23,540,039
Ensembl chrNW_004955431:23,538,242...23,539,051
JBrowse link
G Samd4b sterile alpha motif domain containing 4B ISO (MGI:MGI:5703669|PMID:26609159) MGI PMID:26609159 MGI:MGI:5703669 NCBI chrNW_004955468:172,331...199,230
Ensembl chrNW_004955468:172,352...199,230
JBrowse link
cerebellar Purkinje cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp2b2 ATPase plasma membrane Ca2+ transporting 2 ISO (MGI:MGI:1275896|PMID:9668038) MGI PMID:9668038 MGI:MGI:1275896 NCBI chrNW_004955561:1,727,935...1,851,907
Ensembl chrNW_004955561:1,727,935...1,851,907
JBrowse link
G Atp7a ATPase copper transporting alpha ISO (MGI:MGI:71790|PMID:2473662) MGI PMID:2473662 MGI:MGI:71790 NCBI chrNW_004955557:1,355,471...1,515,725
Ensembl chrNW_004955557:1,355,397...1,515,393
JBrowse link
G Atxn2 ataxin 2 ISO (MGI:MGI:3510013|PMID:10973246) MGI PMID:10973246 MGI:MGI:3510013 NCBI chrNW_004955482:8,101,410...8,187,815
Ensembl chrNW_004955482:8,101,917...8,216,219
JBrowse link
G Cacna1a calcium voltage-gated channel subunit alpha1 A ISO (MGI:MGI:62667|PMID:1306163)
(MGI:MGI:1347769|PMID:10630211)
(MGI:MGI:68980|PMID:7834360)
MGI PMID:1306163, PMID:7834360, PMID:10630211 MGI:MGI:1347769, MGI:MGI:62667, MGI:MGI:68980 NCBI chrNW_004955415:32,182,536...32,457,511
Ensembl chrNW_004955415:32,183,442...32,400,595
JBrowse link
G Cend1 cell cycle exit and neuronal differentiation 1 ISO (MGI:MGI:4830814|PMID:20153830) MGI PMID:20153830 MGI:MGI:4830814 NCBI chrNW_004955476:11,339,586...11,341,996
Ensembl chrNW_004955476:11,339,586...11,341,996
JBrowse link
G Faim2 Fas apoptotic inhibitory molecule 2 ISO (MGI:MGI:5295128|PMID:21957071) UniProtKB PMID:21957071 MGI:MGI:5295128 NCBI chrNW_004955547:467,331...501,172
Ensembl chrNW_004955547:466,777...501,490
JBrowse link
G Herc1 HECT and RLD domain containing E3 ubiquitin protein ligase family member 1 ISO (MGI:MGI:4461108|PMID:20041218) MGI PMID:20041218 MGI:MGI:4461108 NCBI chrNW_004955450:11,525,245...11,719,992
Ensembl chrNW_004955450:11,525,246...11,719,992
JBrowse link
G Ldb1 LIM domain binding 1 ISO (MGI:MGI:3718715|PMID:17664423) MGI PMID:17664423 MGI:MGI:3718715 NCBI chrNW_004955485:8,229,517...8,242,003
Ensembl chrNW_004955485:8,229,517...8,241,142
JBrowse link
G Lhx1 LIM homeobox 1 ISO (MGI:MGI:3718715|PMID:17664423) MGI PMID:17664423 MGI:MGI:3718715 NCBI chrNW_004955451:1,037,936...1,048,501
Ensembl chrNW_004955451:1,037,825...1,048,501
JBrowse link
G Lhx5 LIM homeobox 5 ISO (MGI:MGI:3718715|PMID:17664423) MGI PMID:17664423 MGI:MGI:3718715 NCBI chrNW_004955482:9,682,671...9,691,155
Ensembl chrNW_004955482:9,682,526...9,691,530
JBrowse link
G Psap prosaposin ISO (MGI:MGI:3512714|PMID:15345707) MGI PMID:15345707 MGI:MGI:3512714 NCBI chrNW_004955437:19,667,252...19,683,669 JBrowse link
G Rora RAR related orphan receptor A ISO (MGI:MGI:86446|PMID:8996814) MGI PMID:8996814 MGI:MGI:86446 NCBI chrNW_004955450:14,262,199...14,434,611
Ensembl chrNW_004955450:14,262,190...14,425,233
JBrowse link
G Skor2 SKI family transcriptional corepressor 2 ISO (MGI:MGI:5565016|PMID:24491816)
(MGI:MGI:5300220|PMID:21937600)
MGI PMID:21937600, PMID:24491816 MGI:MGI:5300220, MGI:MGI:5565016 NCBI chrNW_004955402:32,577,189...32,618,611
Ensembl chrNW_004955402:32,582,575...32,618,436
JBrowse link
G Slc25a46 solute carrier family 25 member 46 ISO (MGI:MGI:5921109|PMID:28934388) MGI PMID:28934388 MGI:MGI:5921109 NCBI chrNW_004955418:4,316,790...4,342,748 JBrowse link
G Top2a DNA topoisomerase II alpha ISO RGD PMID:11170002 RGD:8693630 NCBI chrNW_004955451:14,928,273...14,964,855
Ensembl chrNW_004955451:14,929,136...14,964,723
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G Ttc21b tetratricopeptide repeat domain 21B ISO (MGI:MGI:6152587|PMID:29615573) MGI PMID:29615573 MGI:MGI:6152587 NCBI chrNW_004955449:8,242,327...8,306,012
Ensembl chrNW_004955449:8,241,990...8,308,562
JBrowse link
G Ttll1 tubulin tyrosine ligase like 1 ISO (MGI:MGI:6269036|PMID:30420556) MGI PMID:30420556 MGI:MGI:6269036 NCBI chrNW_004955413:28,234,964...28,250,899
Ensembl chrNW_004955413:28,234,486...28,250,688
JBrowse link