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ONTOLOGY REPORT - ANNOTATIONS


Term:proteoglycan catabolic process
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Accession:GO:0030167 term browser browse the term
Definition:The chemical reactions and pathways resulting in the breakdown of proteoglycans, any glycoprotein in which the carbohydrate units are glycosaminoglycans.
Synonyms:exact_synonym: proteoglycan breakdown;   proteoglycan catabolism;   proteoglycan degradation



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proteoglycan catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adamts12 ADAM metallopeptidase with thrombospondin type 1 motif, 12 involved_in ISO (PMID:17895370) RGD PMID:17895370 NCBI chr 2:60,032,873...60,327,629
Ensembl chr 2:60,032,873...60,327,629
JBrowse link
G Btk Bruton tyrosine kinase IMP RGD PMID:32083858 RGD:151665122 NCBI chr  X:97,722,796...97,762,315
Ensembl chr  X:97,722,802...97,761,853
JBrowse link
heparan sulfate proteoglycan catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gpc1 glypican 1 involved_in ISO
IEA
ISS
(PMID:12732622)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:12732622 GO_REF:0000024 GO_REF:0000107 NCBI chr 9:93,396,234...93,424,047
Ensembl chr 9:93,396,234...93,424,047
JBrowse link
G Gusb glucuronidase, beta involved_in ISO MGI:1856041 (MGI:7281718|PMID:23897660)
MGI:1856041 (MGI:7281718|PMID:23897660), (MGI:7284274|PMID:11273777)
RGD PMID:11273777 PMID:23897660 MGI:7281718 MGI:7284274 NCBI chr12:26,701,191...26,714,718
Ensembl chr12:26,697,951...26,726,905
JBrowse link
G Hgsnat heparan-alpha-glucosaminide N-acetyltransferase involved_in ISO UniProtKB:Q68CP4 (MGI:3703408|PMID:16960811) RGD PMID:16960811 MGI:3703408 NCBI chr16:66,105,233...66,137,444
Ensembl chr16:66,105,181...66,136,138
JBrowse link
G Hpse heparanase involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:12213822)
GO_REF:0000107
(MGI:2449691|PMID:12460766)
UniProt
RGD
Ensembl
PMID:12213822 PMID:12460766 GO_REF:0000024 GO_REF:0000107 MGI:2449691 NCBI chr14:8,896,593...8,937,011
Ensembl chr14:8,896,593...8,937,010
JBrowse link
G Ids iduronate 2-sulfatase involved_in ISO MGI:3625122 (MGI:6140076|PMID:17876721) RGD PMID:17876721 MGI:6140076 NCBI chr  X:149,025,977...149,046,639
Ensembl chr  X:149,025,976...149,046,663
JBrowse link
G Idua alpha-L-iduronidase involved_in ISO MGI:2651471 (MGI:3605936|PMID:15979918)
MGI:2176236|MGI:2651471 (MGI:3605936|PMID:15979918), (MGI:7310026|PMID:25854773)
RGD PMID:15979918 PMID:25854773 MGI:3605936 MGI:7310026 NCBI chr14:1,031,588...1,059,494
Ensembl chr14:1,032,171...1,046,522
JBrowse link
G Naglu N-acetyl-alpha-glucosaminidase involved_in ISO MGI:1934018 (MGI:1350713|PMID:10588735) RGD PMID:10588735 MGI:1350713 NCBI chr10:86,001,545...86,009,049
Ensembl chr10:86,001,566...86,008,972
JBrowse link
G Sgsh N-sulfoglucosamine sulfohydrolase involved_in ISO (PMID:15146460)
MGI:2151181 (MGI:2151820|PMID:10561464)
MGI:1856041|MGI:2151181 (MGI:2151820|PMID:10561464), (MGI:7284274|PMID:11273777)
RGD PMID:10561464 PMID:11273777 PMID:15146460 MGI:2151820 MGI:7284274 NCBI chr10:104,596,810...104,613,510
Ensembl chr10:104,598,112...104,613,486
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20099
    metabolic process 12353
      primary metabolic process 11104
        protein metabolic process 6233
          glycoprotein metabolic process 395
            proteoglycan metabolic process 92
              proteoglycan catabolic process 10
                heparan sulfate proteoglycan catabolic process 8
Path 2
Term Annotations click to browse term
  biological_process 20099
    metabolic process 12353
      organic substance metabolic process 11873
        organonitrogen compound metabolic process 7282
          protein metabolic process 6233
            glycoprotein metabolic process 395
              proteoglycan metabolic process 92
                proteoglycan catabolic process 10
                  heparan sulfate proteoglycan catabolic process 8
paths to the root