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ONTOLOGY REPORT - ANNOTATIONS

Term:regulation of proteolysis
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Accession:GO:0030162 term browser browse the term
Definition:Any process that modulates the frequency, rate or extent of the hydrolysis of a peptide bond or bonds within a protein.
Synonyms:exact_synonym: regulation of peptidolysis

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regulation of proteolysis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G C2cd3 C2 domain containing 3 centriole elongation regulator acts_upstream_of_or_within ISO (MGI:3821640|PMID:19004860) MGI PMID:19004860 MGI:3821640 NCBI chrNW_004955414:17,444,299...17,557,912
Ensembl chrNW_004955414:17,444,515...17,558,245 		JBrowse link
G Gsap gamma-secretase activating protein involved_in ISO (PMID:20811458) UniProt PMID:20811458 NCBI chrNW_004955410:7,740,548...7,810,563 JBrowse link
G Parl presenilin associated rhomboid like involved_in ISO (PMID:21355049) ParkinsonsUK-UCL PMID:21355049 NCBI chrNW_004955420:23,549,125...23,581,782
Ensembl chrNW_004955420:23,548,672...23,582,137 		JBrowse link
G Shh sonic hedgehog signaling molecule acts_upstream_of_or_within ISO (MGI:3051935|PMID:15136151) MGI PMID:15136151 MGI:3051935 NCBI chrNW_004955491:8,647,133...8,657,381 JBrowse link
G Traf3 TNF receptor associated factor 3 involved_in ISO (PMID:20185819)
(MGI:4835145|PMID:17158868)
(MGI:3722053|PMID:17015635)		 UniProt PMID:17015635 PMID:17158868 PMID:20185819 MGI:3722053 MGI:4835145 NCBI chrNW_004955538:1,954,152...2,013,367
Ensembl chrNW_004955538:1,954,152...2,013,367 		JBrowse link
activation of cysteine-type endopeptidase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apaf1 apoptotic peptidase activating factor 1 involved_in ISO (PMID:10206961) ComplexPortal PMID:10206961 NCBI chrNW_004955405:34,619,780...34,693,616
Ensembl chrNW_004955405:34,623,267...34,693,677 		JBrowse link
G Asph aspartate beta-hydroxylase involved_in ISO (PMID:18387192) BHF-UCL PMID:18387192 NCBI chrNW_004955444:17,116,060...17,320,966
Ensembl chrNW_004955444:17,121,559...17,318,295 		JBrowse link
G Bad BCL2 associated agonist of cell death involved_in ISO (PMID:18387192) BHF-UCL PMID:18387192 NCBI chrNW_004955422:20,795,585...20,809,039
Ensembl chrNW_004955422:20,795,676...20,809,245 		JBrowse link
G Bak1 BCL2 antagonist/killer 1 involved_in ISO (PMID:18387192) BHF-UCL PMID:18387192 NCBI chrNW_004955437:2,036,415...2,041,997
Ensembl chrNW_004955437:2,036,415...2,041,997 		JBrowse link
G Casp6 caspase 6 involved_in ISO (PMID:9922454) ComplexPortal PMID:9922454 NCBI chrNW_004955496:575,839...584,287
Ensembl chrNW_004955496:577,832...584,287 		JBrowse link
G Casp8 caspase 8 involved_in ISO (PMID:18387192) BHF-UCL PMID:18387192 NCBI chrNW_004955403:322,082...348,591
Ensembl chrNW_004955403:322,555...347,053 		JBrowse link
G Casp9 caspase 9 involved_in ISO (PMID:10206961), (PMID:27882936) ComplexPortal PMID:10206961 PMID:27882936 NCBI chrNW_004955527:2,613,691...2,630,217
Ensembl chrNW_004955527:2,613,683...2,629,738 		JBrowse link
G Cideb cell death inducing DFFA like effector b involved_in ISO (PMID:12595532) AgBase PMID:12595532 NCBI chrNW_004955409:35,993,853...35,996,935
Ensembl chrNW_004955409:35,993,853...35,996,935 		JBrowse link
G Cyfip2 cytoplasmic FMR1 interacting protein 2 involved_in ISO (PMID:18387192) BHF-UCL PMID:18387192 NCBI chrNW_004955408:11,483,891...11,586,628
Ensembl chrNW_004955408:11,462,837...11,588,378 		JBrowse link
G Fadd Fas associated via death domain involved_in ISO (PMID:18387192) BHF-UCL PMID:18387192 NCBI chrNW_004955422:16,026,323...16,035,808
Ensembl chrNW_004955422:16,031,280...16,036,281 		JBrowse link
G Ifi16 interferon gamma inducible protein 16 involved_in ISO (PMID:21575908) UniProt PMID:21575908 NCBI chrNW_004955468:10,828,726...10,845,853 JBrowse link
G Lgmn legumain involved_in ISO (PMID:18374643), (PMID:9821970) ARUK-UCL PMID:9821970 PMID:18374643 NCBI chrNW_004955438:14,905,856...14,938,722
Ensembl chrNW_004955438:14,905,856...14,939,256 		JBrowse link
G LOC102023786 cytochrome c, somatic involved_in ISO (PMID:10206961) ComplexPortal PMID:10206961 NCBI chrNW_004955410:27,086,405...27,089,255
Ensembl chrNW_004955410:27,086,405...27,089,255 		JBrowse link
G Nlrc4 NLR family CARD domain containing 4 involved_in ISO (PMID:15882992) CACAO
ARUK-UCL		 PMID:15882992 NCBI chrNW_004955441:570,853...607,529
Ensembl chrNW_004955441:570,880...603,128 		JBrowse link
G Nlrp6 NLR family pyrin domain containing 6 acts_upstream_of_or_within ISO (MGI:6453663|PMID:30248149) MGI PMID:30248149 MGI:6453663 NCBI chrNW_004955476:11,755,489...11,762,781 JBrowse link
G Pawr pro-apoptotic WT1 regulator ISO RGD PMID:10349840 RGD:9835366 NCBI chrNW_004955405:18,434,711...18,540,710
Ensembl chrNW_004955405:18,434,711...18,540,710 		JBrowse link
G Perp p53 apoptosis effector related to PMP22 involved_in ISO (PMID:18387192) BHF-UCL PMID:18387192 NCBI chrNW_004955436:21,425,321...21,430,780
Ensembl chrNW_004955436:21,417,332...21,431,312 		JBrowse link
G Ripk2 receptor interacting serine/threonine kinase 2 involved_in ISO (PMID:11821383) UniProt PMID:11821383 NCBI chrNW_004955417:6,669,675...6,698,142
Ensembl chrNW_004955417:6,669,675...6,702,228 		JBrowse link
G Tbc1d10a TBC1 domain family member 10A involved_in ISO (PMID:18387192) BHF-UCL PMID:18387192 NCBI chrNW_004955455:4,537,634...4,570,949
Ensembl chrNW_004955455:4,537,634...4,570,949 		JBrowse link
activation of cysteine-type endopeptidase activity involved in apoptotic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acer2 alkaline ceramidase 2 involved_in ISO (PMID:20628055) BHF-UCL PMID:20628055 NCBI chrNW_004955434:21,786,857...21,810,648
Ensembl chrNW_004955434:21,786,856...21,810,648 		JBrowse link
G Aifm1 apoptosis inducing factor mitochondria associated 1 involved_in ISO (PMID:17094969) UniProt PMID:17094969 NCBI chrNW_004955473:4,891,955...4,925,705
Ensembl chrNW_004955473:4,891,955...4,926,428 		JBrowse link
G Anp32b acidic nuclear phosphoprotein 32 family member B involved_in ISO (PMID:20015864) UniProt PMID:20015864 NCBI chrNW_004955419:27,471,539...27,553,078
Ensembl chrNW_004955419:27,471,930...27,488,065 		JBrowse link
G Apaf1 apoptotic peptidase activating factor 1 involved_in
acts_upstream_of_or_within		 ISO (PMID:21827945)
(MGI:3577148|PMID:15703386)
(MGI:3575207|PMID:15776018)		 UniProt
MGI		 PMID:15703386 PMID:15776018 PMID:21827945 MGI:3575207 MGI:3577148 NCBI chrNW_004955405:34,619,780...34,693,616
Ensembl chrNW_004955405:34,623,267...34,693,677 		JBrowse link
G Atp2a3 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3 involved_in ISO (PMID:16725111) ARUK-UCL PMID:16725111 NCBI chrNW_004955467:12,911,679...12,941,322
Ensembl chrNW_004955467:12,911,679...12,941,924 		JBrowse link
G Bad BCL2 associated agonist of cell death involved_in ISO (MGI:4453294|PMID:19915011) UniProt PMID:19915011 MGI:4453294 NCBI chrNW_004955422:20,795,585...20,809,039
Ensembl chrNW_004955422:20,795,676...20,809,245 		JBrowse link
G Bak1 BCL2 antagonist/killer 1 acts_upstream_of_or_within ISO (MGI:2667259|PMID:12847083), (MGI:3575207|PMID:15776018)
(MGI:3662939|PMID:16893972)		 MGI PMID:12847083 PMID:15776018 PMID:16893972 MGI:2667259 MGI:3575207 MGI:3662939 NCBI chrNW_004955437:2,036,415...2,041,997
Ensembl chrNW_004955437:2,036,415...2,041,997 		JBrowse link
G Bax BCL2 associated X, apoptosis regulator involved_in
acts_upstream_of_or_within		 ISO (PMID:11912183)
(MGI:2667259|PMID:12847083), (MGI:3575207|PMID:15776018)
(MGI:3692043|PMID:14502238)
(MGI:5009404|PMID:16735463)
(MGI:3041326|PMID:14561915)
(PMID:11350920)		 HGNC-UCL
MGI
UniProt		 PMID:11350920 PMID:11912183 PMID:12847083 PMID:14502238 PMID:14561915 More... MGI:2667259 MGI:3041326 MGI:3575207 MGI:3692043 MGI:5009404 NCBI chrNW_004955559:1,695,960...1,700,246
Ensembl chrNW_004955559:1,695,960...1,700,244 		JBrowse link
G Bbc3 BCL2 binding component 3 involved_in ISO (PMID:11463392), (PMID:17024184) UniProt PMID:11463392 PMID:17024184 NCBI chrNW_004955574:1,167,790...1,174,966
Ensembl chrNW_004955574:1,167,242...1,174,966 		JBrowse link
G Bcl2l11 BCL2 like 11 involved_in ISO (PMID:21671007) UniProt PMID:21671007 NCBI chrNW_004955470:2,740,682...2,780,225 JBrowse link
G Bid BH3 interacting domain death agonist acts_upstream_of_or_within ISO (MGI:2183141|PMID:12011074) MGI PMID:12011074 MGI:2183141 NCBI chrNW_004955454:5,776,656...5,785,500
Ensembl chrNW_004955454:5,777,667...5,783,118 		JBrowse link
G Bok BCL2 family apoptosis regulator BOK involved_in ISO (PMID:20673843) UniProt PMID:20673843 NCBI chrNW_004955542:224,471...232,401
Ensembl chrNW_004955542:224,471...232,428 		JBrowse link
G Casp8 caspase 8 acts_upstream_of_or_within
involved_in		 ISO (MGI:2183141|PMID:12011074)
(PMID:16916640)		 MGI
UniProt		 PMID:12011074 PMID:16916640 MGI:2183141 NCBI chrNW_004955403:322,082...348,591
Ensembl chrNW_004955403:322,555...347,053 		JBrowse link
G Casp8ap2 caspase 8 associated protein 2 involved_in
acts_upstream_of_or_within		 ISO (PMID:17245429)
(MGI:1347587|PMID:10235259)		 UniProt
MGI		 PMID:10235259 PMID:17245429 MGI:1347587 NCBI chrNW_004955411:16,535,646...16,568,139 JBrowse link
G Casp9 caspase 9 acts_upstream_of_or_within
involved_in		 ISO (MGI:3575207|PMID:15776018)
(PMID:16916640)		 MGI
UniProt		 PMID:15776018 PMID:16916640 MGI:3575207 NCBI chrNW_004955527:2,613,691...2,630,217
Ensembl chrNW_004955527:2,613,683...2,629,738 		JBrowse link
G Cck cholecystokinin ISO RGD PMID:11964411 RGD:625521 NCBI chrNW_004955420:28,438,806...28,443,458
Ensembl chrNW_004955420:28,438,806...28,443,458 		JBrowse link
G Col4a3 collagen type IV alpha 3 chain involved_in ISO (PMID:10766752) UniProt PMID:10766752 NCBI chrNW_004955453:7,261,278...7,351,414 JBrowse link
G Dap death associated protein involved_in ISO (PMID:1087798) UniProt PMID:1087798 NCBI chrNW_004955426:398,593...452,004
Ensembl chrNW_004955426:398,593...452,004 		JBrowse link
G Diablo diablo IAP-binding mitochondrial protein acts_upstream_of_or_within ISO (MGI:2183141|PMID:12011074), (MGI:3587135|PMID:16085184)
(MGI:3587135|PMID:16085184)		 MGI PMID:12011074 PMID:16085184 MGI:2183141 MGI:3587135 NCBI chrNW_004955482:6,354,502...6,364,424
Ensembl chrNW_004955482:6,354,146...6,365,344 		JBrowse link
G Dlc1 DLC1 Rho GTPase activating protein involved_in ISO (PMID:17888903) UniProt PMID:17888903 NCBI chrNW_004955463:3,599,415...3,981,187
Ensembl chrNW_004955463:3,598,985...3,990,849 		JBrowse link
G Dnaja3 DnaJ heat shock protein family (Hsp40) member A3 involved_in ISO (PMID:10411904) UniProt PMID:10411904 NCBI chrNW_004955442:12,971,031...13,002,605
Ensembl chrNW_004955442:12,967,438...13,010,943 		JBrowse link
G Egln3 egl-9 family hypoxia inducible factor 3 involved_in ISO (PMID:20978507) UniProt PMID:20978507 NCBI chrNW_004955409:26,939,933...26,967,156
Ensembl chrNW_004955409:26,939,933...26,967,156 		JBrowse link
G Eif2ak3 eukaryotic translation initiation factor 2 alpha kinase 3 acts_upstream_of_or_within ISO (MGI:1858648|PMID:10882126) MGI PMID:10882126 MGI:1858648 NCBI chrNW_004955424:210,867...279,267
Ensembl chrNW_004955424:226,038...280,593 		JBrowse link
G F2r coagulation factor II thrombin receptor involved_in ISO (PMID:10692450) BHF-UCL PMID:10692450 NCBI chrNW_004955425:24,144,905...24,164,498 JBrowse link
G F3 coagulation factor III, tissue factor involved_in ISO (PMID:17898544) BHF-UCL PMID:17898544 NCBI chrNW_004955423:254,060...264,448
Ensembl chrNW_004955423:254,189...264,159 		JBrowse link
G Fam162a family with sequence similarity 162 member A involved_in ISO (PMID:15082785) UniProt PMID:15082785 NCBI chrNW_004955427:21,668,180...21,695,004
Ensembl chrNW_004955427:21,667,922...21,694,844 		JBrowse link
G Faslg Fas ligand involved_in
acts_upstream_of_or_within		 ISO (PMID:18293083)
(PMID:19364818)		 BHF-UCL
MGI		 PMID:18293083 PMID:19364818 NCBI chrNW_004955406:13,098,479...13,107,045
Ensembl chrNW_004955406:13,098,662...13,107,389 		JBrowse link
G Hip1 huntingtin interacting protein 1 acts_upstream_of_or_within ISO (PMID:11788820) MGI PMID:11788820 NCBI chrNW_004955456:14,389,282...14,529,317
Ensembl chrNW_004955456:14,392,921...14,529,213 		JBrowse link
G Hip1r huntingtin interacting protein 1 related involved_in ISO (PMID:19255499) ParkinsonsUK-UCL PMID:19255499 NCBI chrNW_004955482:5,885,807...5,896,386
Ensembl chrNW_004955482:5,884,839...5,896,389 		JBrowse link
G Hspd1 heat shock protein family D (Hsp60) member 1 involved_in ISO (PMID:17823127) BHF-UCL PMID:17823127 NCBI chrNW_004955403:3,062,724...3,073,419
Ensembl chrNW_004955403:3,063,133...3,073,419 		JBrowse link
G Ift57 intraflagellar transport 57 acts_upstream_of_or_within ISO (PMID:11788820) MGI PMID:11788820 NCBI chrNW_004955427:8,814,298...8,871,671
Ensembl chrNW_004955427:8,814,298...8,871,720 		JBrowse link
G Jak2 Janus kinase 2 involved_in ISO (MGI:5009182|PMID:12426001) BHF-UCL PMID:12426001 MGI:5009182 NCBI chrNW_004955434:9,227,897...9,341,208
Ensembl chrNW_004955434:9,227,595...9,341,208 		JBrowse link
G Laptm5 lysosomal protein transmembrane 5 involved_in ISO (PMID:28464033) ARUK-UCL PMID:28464033 NCBI chrNW_004955452:9,335,481...9,358,177
Ensembl chrNW_004955452:9,334,587...9,358,444 		JBrowse link
G Lck LCK proto-oncogene, Src family tyrosine kinase involved_in ISO (PMID:16116473) UniProt PMID:16116473 NCBI chrNW_004955452:10,608,317...10,632,310
Ensembl chrNW_004955452:10,608,318...10,632,310 		JBrowse link
G Mtch1 mitochondrial carrier 1 involved_in ISO (PMID:12377771) UniProt PMID:12377771 NCBI chrNW_004955437:6,046,033...6,061,086
Ensembl chrNW_004955437:6,045,321...6,061,086 		JBrowse link
G Mul1 mitochondrial E3 ubiquitin protein ligase 1 involved_in ISO (PMID:18591963) UniProt PMID:18591963 NCBI chrNW_004955452:1,059,168...1,066,096
Ensembl chrNW_004955452:1,058,930...1,066,096 		JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor acts_upstream_of_or_within ISO (MGI:2677658|PMID:14517295) MGI PMID:14517295 MGI:2677658 NCBI chrNW_004955461:2,714,022...2,718,872
Ensembl chrNW_004955461:2,714,022...2,718,982 		JBrowse link
G Ngf nerve growth factor involved_in ISO (PMID:11927634) ARUK-UCL PMID:11927634 NCBI chrNW_004955435:18,581,889...18,633,330
Ensembl chrNW_004955435:18,581,808...18,601,059 		JBrowse link
G Ngfr nerve growth factor receptor involved_in ISO (PMID:26268439) BHF-UCL PMID:26268439 NCBI chrNW_004955451:12,030,303...12,047,305
Ensembl chrNW_004955451:12,030,252...12,047,305 		JBrowse link
G Nkx3-1 NK3 homeobox 1 involved_in ISO (PMID:17486276), (PMID:19266349) UniProt PMID:17486276 PMID:19266349 NCBI chrNW_004955403:46,807,846...46,809,924
Ensembl chrNW_004955403:46,806,178...46,836,310 		JBrowse link
G Nlrc4 NLR family CARD domain containing 4 involved_in ISO (PMID:15030775) HGNC-UCL PMID:15030775 NCBI chrNW_004955441:570,853...607,529
Ensembl chrNW_004955441:570,880...603,128 		JBrowse link
G Nlrp3 NLR family pyrin domain containing 3 acts_upstream_of_or_within ISO (MGI:3697006|PMID:17008311) MGI PMID:17008311 MGI:3697006 NCBI chrNW_004955581:597,952...616,903
Ensembl chrNW_004955581:597,667...617,410 		JBrowse link
G Nod1 nucleotide binding oligomerization domain containing 1 acts_upstream_of_or_within ISO (PMID:10329646) MGI PMID:10329646 NCBI chrNW_004955410:31,681,191...31,725,173
Ensembl chrNW_004955410:31,681,077...31,725,173 		JBrowse link
G P2rx1 purinergic receptor P2X 1 acts_upstream_of_or_within ISO (MGI:3640029|PMID:16325464) MGI PMID:16325464 MGI:3640029 NCBI chrNW_004955467:12,955,663...12,971,547
Ensembl chrNW_004955467:12,955,672...12,971,547 		JBrowse link
G Pdcd2 programmed cell death 2 involved_in ISO (PMID:20605493) UniProt PMID:20605493 NCBI chrNW_004955411:3,256,612...3,262,685
Ensembl chrNW_004955411:3,256,690...3,262,322 		JBrowse link
G Pdcd6 programmed cell death 6 acts_upstream_of_or_within ISO (MGI:2684521|PMID:14561754) MGI PMID:14561754 MGI:2684521 NCBI chrNW_004955504:75,378...94,654
Ensembl chrNW_004955504:74,944...98,282 		JBrowse link
G Pidd1 p53-induced death domain protein 1 involved_in
acts_upstream_of_or_within		 ISO (PMID:17159900)
(MGI:3603971|PMID:16183742)		 UniProt
MGI		 PMID:16183742 PMID:17159900 MGI:3603971 NCBI chrNW_004955476:11,325,877...11,331,447
Ensembl chrNW_004955476:11,326,626...11,331,360 		JBrowse link
G Pmaip1 phorbol-12-myristate-13-acetate-induced protein 1 involved_in ISO (MGI:5009174|PMID:14699081) UniProt PMID:14699081 MGI:5009174 NCBI chrNW_004955402:44,005,517...44,010,722 JBrowse link
G Pml PML nuclear body scaffold acts_upstream_of_or_within ISO (MGI:1306978|PMID:9806545) MGI PMID:9806545 MGI:1306978 NCBI chrNW_004955450:3,654,854...3,692,057
Ensembl chrNW_004955450:3,656,498...3,692,406 		JBrowse link
G Pparg peroxisome proliferator activated receptor gamma involved_in ISO (PMID:18293083) BHF-UCL PMID:18293083 NCBI chrNW_004955429:14,814,690...14,936,869
Ensembl chrNW_004955429:14,873,908...14,937,387 		JBrowse link
G Rack1 receptor for activated C kinase 1 involved_in ISO (PMID:19767770) UniProt PMID:19767770 NCBI chrNW_004955530:78,488...83,297
Ensembl chrNW_004955530:78,426...83,297 		JBrowse link
G Ret ret proto-oncogene involved_in ISO (PMID:10921886) UniProt PMID:10921886 NCBI chrNW_004955546:1,221,995...1,252,147
Ensembl chrNW_004955546:1,221,995...1,253,946 		JBrowse link
G Rnf7 ring finger protein 7 acts_upstream_of_or_within ISO (MGI:1333612|PMID:10082581) MGI PMID:10082581 MGI:1333612 NCBI chrNW_004955508:4,001,441...4,003,518 JBrowse link
G Robo1 roundabout guidance receptor 1 involved_in ISO (PMID:18566128) UniProt PMID:18566128 NCBI chrNW_004955407:12,593,911...13,485,723
Ensembl chrNW_004955407:13,107,235...13,487,053 		JBrowse link
G Rps27l ribosomal protein S27 like involved_in ISO (PMID:17057733) UniProt PMID:17057733 NCBI chrNW_004955450:12,122,948...12,126,167
Ensembl chrNW_004955450:12,122,921...12,128,101 		JBrowse link
G S100a9 S100 calcium binding protein A9 involved_in ISO (PMID:19935772) UniProt PMID:19935772 NCBI chrNW_004955592:90,647...93,842 JBrowse link
G Senp1 SUMO specific peptidase 1 involved_in ISO (PMID:1087798) UniProt PMID:1087798 NCBI chrNW_004955500:6,924,445...6,978,482
Ensembl chrNW_004955500:6,926,548...6,979,230 		JBrowse link
G Slc1a1 solute carrier family 1 member 1 acts_upstream_of_or_within ISO (MGI:5508628|PMID:16858406) MGI PMID:16858406 MGI:5508628 NCBI chrNW_004955434:8,790,685...8,879,757
Ensembl chrNW_004955434:8,790,685...8,879,757 		JBrowse link
G Slc22a2 solute carrier family 22 member 2 acts_upstream_of ISO PMID:30120945 ARUK-UCL PMID:30120945 RGD:30309911 NCBI chrNW_004955439:20,567,241...20,608,281
Ensembl chrNW_004955439:20,567,212...20,609,105 		JBrowse link
G Smad3 SMAD family member 3 involved_in ISO (PMID:15107418) BHF-UCL PMID:15107418 NCBI chrNW_004955450:8,747,651...8,842,003
Ensembl chrNW_004955450:8,747,651...8,842,136 		JBrowse link
G Snca synuclein alpha involved_in ISO (PMID:21050448) BHF-UCL PMID:21050448 NCBI chrNW_004955405:854,011...962,741
Ensembl chrNW_004955405:853,946...965,403 		JBrowse link
G Stat1 signal transducer and activator of transcription 1 involved_in ISO (MGI:5447631|PMID:10692450) UniProt PMID:10692450 MGI:5447631 NCBI chrNW_004955403:8,156,660...8,192,018
Ensembl chrNW_004955403:8,156,660...8,194,762 		JBrowse link
G Tnf tumor necrosis factor involved_in
acts_upstream_of_or_within		 ISO (PMID:16723520)
(MGI:3603971|PMID:16183742)		 UniProt
MGI		 PMID:16183742 PMID:16723520 MGI:3603971 NCBI chrNW_004955437:117,267...119,899
Ensembl chrNW_004955437:117,206...120,700 		JBrowse link
G Tnfsf15 TNF superfamily member 15 acts_upstream_of_or_within ISO (PMID:11911831) RGD
MGI		 PMID:11911831 RGD:634236 NCBI chrNW_004955419:12,863,617...12,884,498
Ensembl chrNW_004955419:12,863,615...12,879,517 		JBrowse link
G Vcp valosin containing protein acts_upstream_of_or_within ISO (MGI:2684521|PMID:14561754) MGI PMID:14561754 MGI:2684521 NCBI chrNW_004955472:1,111,649...1,124,076
Ensembl chrNW_004955472:1,107,164...1,124,076 		JBrowse link
activation of cysteine-type endopeptidase activity involved in apoptotic process by cytochrome c term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apaf1 apoptotic peptidase activating factor 1 involved_in ISO (PMID:10206961), (PMID:9267021) ComplexPortal PMID:9267021 PMID:10206961 NCBI chrNW_004955405:34,619,780...34,693,616
Ensembl chrNW_004955405:34,623,267...34,693,677 		JBrowse link
G Bak1 BCL2 antagonist/killer 1 acts_upstream_of_or_within ISO (MGI:2178486|PMID:11836241) MGI PMID:11836241 MGI:2178486 NCBI chrNW_004955437:2,036,415...2,041,997
Ensembl chrNW_004955437:2,036,415...2,041,997 		JBrowse link
G Bax BCL2 associated X, apoptosis regulator involved_in
acts_upstream_of_or_within		 ISO (PMID:15214043)
(MGI:1203837|PMID:9560217)
(MGI:2178486|PMID:11836241)		 HGNC-UCL
MGI		 PMID:9560217 PMID:11836241 PMID:15214043 MGI:1203837 MGI:2178486 NCBI chrNW_004955559:1,695,960...1,700,246
Ensembl chrNW_004955559:1,695,960...1,700,244 		JBrowse link
G Bok BCL2 family apoptosis regulator BOK involved_in ISO (MGI:5648772|PMID:26015568) UniProt PMID:26015568 MGI:5648772 NCBI chrNW_004955542:224,471...232,401
Ensembl chrNW_004955542:224,471...232,428 		JBrowse link
G Casp9 caspase 9 involved_in ISO (PMID:10206961) ComplexPortal PMID:10206961 NCBI chrNW_004955527:2,613,691...2,630,217
Ensembl chrNW_004955527:2,613,683...2,629,738 		JBrowse link
G Cops5 COP9 signalosome subunit 5 involved_in ISO (PMID:24091666) AgBase PMID:24091666 NCBI chrNW_004955444:12,217,337...12,233,570
Ensembl chrNW_004955444:12,217,337...12,234,193 		JBrowse link
G Diablo diablo IAP-binding mitochondrial protein acts_upstream_of_or_within ISO (MGI:2681362|PMID:14623868) MGI PMID:14623868 MGI:2681362 NCBI chrNW_004955482:6,354,502...6,364,424
Ensembl chrNW_004955482:6,354,146...6,365,344 		JBrowse link
G LOC102023786 cytochrome c, somatic acts_upstream_of_or_within
involved_in		 ISO (MGI:2681362|PMID:14623868)
(PMID:10206961)
(MGI:1858667|PMID:10830166)
(MGI:3580764|PMID:15907471)		 MGI
ComplexPortal		 PMID:10206961 PMID:10830166 PMID:14623868 PMID:15907471 MGI:1858667 MGI:2681362 MGI:3580764 NCBI chrNW_004955410:27,086,405...27,089,255
Ensembl chrNW_004955410:27,086,405...27,089,255 		JBrowse link
activation of cysteine-type endopeptidase activity involved in apoptotic signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bax BCL2 associated X, apoptosis regulator acts_upstream_of_or_within ISO (MGI:1344924|PMID:10479688) MGI PMID:10479688 MGI:1344924 NCBI chrNW_004955559:1,695,960...1,700,246
Ensembl chrNW_004955559:1,695,960...1,700,244 		JBrowse link
G Jak2 Janus kinase 2 involved_in ISO (MGI:5009182|PMID:12426001) BHF-UCL PMID:12426001 MGI:5009182 NCBI chrNW_004955434:9,227,897...9,341,208
Ensembl chrNW_004955434:9,227,595...9,341,208 		JBrowse link
G Smad3 SMAD family member 3 ISO TGF-beta1-induced cleavage of BAD to its more active 15 kD form RGD PMID:11839804 RGD:2301029 NCBI chrNW_004955450:8,747,651...8,842,003
Ensembl chrNW_004955450:8,747,651...8,842,136 		JBrowse link
Factor XII activation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G F12 coagulation factor XII involved_in ISO (PMID:18725990) BHF-UCL PMID:18725990 NCBI chrNW_004955408:29,644,279...29,665,161
Ensembl chrNW_004955408:29,642,096...29,650,950 		JBrowse link
G Hpse heparanase involved_in ISO (PMID:20634491) ComplexPortal PMID:20634491 NCBI chrNW_004955474:6,367,467...6,394,395
Ensembl chrNW_004955474:6,367,467...6,394,395 		JBrowse link
G Kng1 kininogen 1 ISO RGD PMID:6685967 RGD:11062094 NCBI chrNW_004955420:20,989,197...21,016,084 JBrowse link
inhibition of cysteine-type endopeptidase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cast calpastatin involved_in ISO (PMID:2407243) CAFA PMID:2407243 NCBI chrNW_004955418:15,859,951...15,974,141
Ensembl chrNW_004955418:15,862,729...15,916,169 		JBrowse link
G Cst7 cystatin F acts_upstream_of_or_within ISO (MGI:5904382|PMID:28251676) MGI PMID:28251676 MGI:5904382 NCBI chrNW_004955415:31,082,978...31,086,379
Ensembl chrNW_004955415:31,082,978...31,086,379 		JBrowse link
G Nol3 nucleolar protein 3 involved_in ISO PMID:17292893
PMID:16639714		 UniProt PMID:16639714 PMID:17292893 RGD:10047164 RGD:10047212 NCBI chrNW_004955484:9,443,090...9,447,142
Ensembl chrNW_004955484:9,443,090...9,447,095 		JBrowse link
G Xiap X-linked inhibitor of apoptosis involved_in ISO (PMID:11865055) UniProt PMID:11865055 NCBI chrNW_004955473:10,823,795...10,878,256
Ensembl chrNW_004955473:10,827,435...10,840,604 		JBrowse link
inhibition of cysteine-type endopeptidase activity involved in apoptotic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl2l12 BCL2 like 12 involved_in ISO (PMID:22262180) UniProt PMID:22262180 NCBI chrNW_004955559:1,217,797...1,224,875
Ensembl chrNW_004955559:1,217,809...1,224,875 		JBrowse link
G Fcmr Fc fragment of IgM receptor acts_upstream_of_or_within ISO (MGI:3576402|PMID:15632112) MGI PMID:15632112 MGI:3576402 NCBI chrNW_004955406:42,438,173...42,452,339
Ensembl chrNW_004955406:42,438,783...42,452,163 		JBrowse link
G Nol3 nucleolar protein 3 involved_in ISO (PMID:15509781) UniProt PMID:15509781 NCBI chrNW_004955484:9,443,090...9,447,142
Ensembl chrNW_004955484:9,443,090...9,447,095 		JBrowse link
G Xiap X-linked inhibitor of apoptosis acts_upstream_of_or_within ISO (MGI:2681362|PMID:14623868) MGI PMID:14623868 MGI:2681362 NCBI chrNW_004955473:10,823,795...10,878,256
Ensembl chrNW_004955473:10,827,435...10,840,604 		JBrowse link
negative regulation of aspartic-type endopeptidase activity involved in amyloid precursor protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bin1 bridging integrator 1 involved_in ISO (PMID:27179792)
(MGI:5811968|PMID:27179792)		 ARUK-UCL PMID:27179792 MGI:5811968 NCBI chrNW_004955459:3,376,149...3,423,157
Ensembl chrNW_004955459:3,399,611...3,422,621 		JBrowse link
G Sorl1 sortilin related receptor 1 involved_in ISO (PMID:17855360), (PMID:21989385)
(MGI:3801250|PMID:18362153)
(PMID:16407538)		 Alzheimers_University_of_Toronto PMID:16407538 PMID:17855360 PMID:18362153 PMID:21989385 MGI:3801250 NCBI chrNW_004955412:22,421,984...22,576,179
Ensembl chrNW_004955412:22,421,984...22,576,179 		JBrowse link
G Tmed10 transmembrane p24 trafficking protein 10 acts_upstream_of_or_within ISO (MGI:3623864|PMID:16641999) MGI PMID:16641999 MGI:3623864 NCBI chrNW_004955523:393,632...438,114 JBrowse link
negative regulation of cysteine-type endopeptidase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Csn2 casein beta involved_in ISO (PMID:12788072) CAFA PMID:12788072 NCBI chrNW_004955447:2,868,899...2,889,969 JBrowse link
G Grk2 G protein-coupled receptor kinase 2 ISO RGD PMID:23690069 RGD:13792722 NCBI chrNW_004955422:18,173,438...18,192,357
Ensembl chrNW_004955422:18,170,616...18,192,412 		JBrowse link
G Htt huntingtin ISO RGD PMID:17124493 RGD:6902918 NCBI chrNW_004955514:1,906,189...2,042,357
Ensembl chrNW_004955514:1,906,502...2,038,889 		JBrowse link
G Ifi16 interferon gamma inducible protein 16 involved_in ISO (PMID:22046441) UniProt PMID:22046441 NCBI chrNW_004955468:10,828,726...10,845,853 JBrowse link
G Ltf lactotransferrin involved_in ISO (PMID:12788072) CAFA PMID:12788072 NCBI chrNW_004955420:25,580,449...25,604,277
Ensembl chrNW_004955420:25,580,359...25,604,331 		JBrowse link
G Pcid2 PCI domain containing 2 involved_in ISO (PMID:20870947) UniProt PMID:20870947 NCBI chrNW_004955404:618,092...639,424
Ensembl chrNW_004955404:618,092...639,704 		JBrowse link
negative regulation of cysteine-type endopeptidase activity involved in apoptotic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adora2a adenosine A2a receptor ISO RGD PMID:15211592 RGD:1625666 NCBI chrNW_004955455:7,886,720...7,906,214
Ensembl chrNW_004955455:7,895,974...7,906,505 		JBrowse link
G Akt1 AKT serine/threonine kinase 1 involved_in ISO (MGI:5294538|PMID:18977203) UniProt PMID:18977203 MGI:5294538 NCBI chrNW_004955538:3,208,711...3,224,386
Ensembl chrNW_004955538:3,208,710...3,229,904 		JBrowse link
G Akt2 AKT serine/threonine kinase 2 ISO caspase 3 RGD PMID:18348079 RGD:2313324 NCBI chrNW_004955578:950,258...1,004,438
Ensembl chrNW_004955578:967,593...1,004,438 		JBrowse link
G Aqp1 aquaporin 1 (Colton blood group) involved_in ISO (PMID:21215257) UniProt PMID:21215257 NCBI chrNW_004955410:32,066,196...32,078,661
Ensembl chrNW_004955410:32,066,196...32,078,717 		JBrowse link
G Arl6ip1 ADP ribosylation factor like GTPase 6 interacting protein 1 involved_in ISO (PMID:12754298) UniProt PMID:12754298 NCBI chrNW_004955442:2,540,676...2,550,531
Ensembl chrNW_004955442:2,540,676...2,550,531 		JBrowse link
G Arrb1 arrestin beta 1 involved_in ISO (MGI:4453294|PMID:19915011) UniProt PMID:19915011 MGI:4453294 NCBI chrNW_004955414:16,478,843...16,568,050
Ensembl chrNW_004955414:16,478,843...16,562,135 		JBrowse link
G Arrb2 arrestin beta 2 ISO RGD PMID:19171933 RGD:5510006 NCBI chrNW_004955467:10,109,985...10,118,687
Ensembl chrNW_004955467:10,110,003...10,123,022 		JBrowse link
G Cd44 CD44 molecule (Indian blood group) involved_in ISO (PMID:19047049) UniProt PMID:19047049 NCBI chrNW_004955422:11,106,061...11,189,951 JBrowse link
G Cdkn2d cyclin dependent kinase inhibitor 2D involved_in ISO (PMID:15750620) BHF-UCL PMID:15750620 NCBI chrNW_004955495:1,755,280...1,759,125
Ensembl chrNW_004955495:1,755,878...1,757,037 		JBrowse link
G Cflar CASP8 and FADD like apoptosis regulator acts_upstream_of_or_within ISO (MGI:3612311|PMID:16263940) MGI PMID:16263940 MGI:3612311 NCBI chrNW_004955403:415,092...442,214
Ensembl chrNW_004955403:412,632...434,741 		JBrowse link
G Cryaa crystallin alpha A acts_upstream_of_or_within ISO (MGI:3617146|PMID:16439475) MGI PMID:16439475 MGI:3617146 NCBI chrNW_004955407:38,880,088...38,892,946
Ensembl chrNW_004955407:38,880,086...38,925,642 		JBrowse link
G Cryab crystallin alpha B acts_upstream_of_or_within ISO (MGI:3617146|PMID:16439475) MGI PMID:16439475 MGI:3617146 NCBI chrNW_004955412:13,626,018...13,629,495
Ensembl chrNW_004955412:13,625,363...13,640,426 		JBrowse link
G Csnk2a1 casein kinase 2 alpha 1 involved_in ISO (PMID:16193064) UniProt PMID:16193064 NCBI chrNW_004955597:326,601...397,112 JBrowse link
G Ddx3x DEAD-box helicase 3 X-linked involved_in ISO (PMID:18846110) UniProt PMID:18846110 NCBI chrNW_004955565:1,387,043...1,403,624
Ensembl chrNW_004955565:1,386,973...1,404,220 		JBrowse link
G Dhcr24 24-dehydrocholesterol reductase involved_in ISO (PMID:11007892) UniProt PMID:11007892 NCBI chrNW_004955464:4,533,928...4,557,893
Ensembl chrNW_004955464:4,533,928...4,558,133 		JBrowse link
G Dnaja3 DnaJ heat shock protein family (Hsp40) member A3 involved_in ISO (PMID:10411904) UniProt PMID:10411904 NCBI chrNW_004955442:12,971,031...13,002,605
Ensembl chrNW_004955442:12,967,438...13,010,943 		JBrowse link
G Dnajb6 DnaJ heat shock protein family (Hsp40) member B6 involved_in ISO (PMID:11896048) UniProt PMID:11896048 NCBI chrNW_004955579:240,058...298,592 JBrowse link
G Dpep1 dipeptidase 1 involved_in ISO (PMID:20435919) UniProt PMID:20435919 NCBI chrNW_004955541:3,204,421...3,215,514
Ensembl chrNW_004955541:3,204,055...3,215,565 		JBrowse link
G Ep300 E1A binding protein p300 ISO cardiac myocytes RGD PMID:22562121 RGD:7327216 NCBI chrNW_004955413:26,647,553...26,727,875
Ensembl chrNW_004955413:26,648,339...26,727,933 		JBrowse link
G Fnip1 folliculin interacting protein 1 acts_upstream_of_or_within ISO (MGI:5444323|PMID:22709692) MGI PMID:22709692 MGI:5444323 NCBI chrNW_004955408:3,117,258...3,238,223
Ensembl chrNW_004955408:3,117,277...3,238,223 		JBrowse link
G Gas6 growth arrest specific 6 involved_in ISO (PMID:16723520) UniProt PMID:16723520 NCBI chrNW_004955404:276,397...303,864
Ensembl chrNW_004955404:275,946...304,809 		JBrowse link
G Gpi glucose-6-phosphate isomerase ISO RGD PMID:12615053 RGD:1600634 NCBI chrNW_004955468:3,980,999...4,007,553
Ensembl chrNW_004955468:3,980,999...4,008,652 		JBrowse link
G Gpx1 glutathione peroxidase 1 involved_in ISO (PMID:12221075) BHF-UCL PMID:12221075 NCBI chrNW_004955532:1,298,336...1,298,830 JBrowse link
G Herpud1 homocysteine inducible ER protein with ubiquitin like domain 1 ISO RGD PMID:15102845 RGD:1304324 NCBI chrNW_004955433:14,609,275...14,621,774
Ensembl chrNW_004955433:14,608,375...14,621,839 		JBrowse link
G Hgf hepatocyte growth factor involved_in ISO (PMID:20655899) BHF-UCL PMID:20655899 NCBI chrNW_004955410:4,114,280...4,181,953
Ensembl chrNW_004955410:4,114,778...4,182,058 		JBrowse link
G Hnf1a HNF1 homeobox A ISO RGD PMID:21874357 RGD:150540304 NCBI chrNW_004955455:10,694,102...10,717,613
Ensembl chrNW_004955455:10,694,102...10,717,613 		JBrowse link
G Igbp1 immunoglobulin binding protein 1 involved_in ISO (PMID:17438131) UniProt PMID:17438131 NCBI chrNW_004955475:9,671,162...9,694,926 JBrowse link
G Igf1 insulin like growth factor 1 involved_in ISO PMID:17023532 BHF-UCL PMID:17023532 RGD:1600072 NCBI chrNW_004955405:37,505,830...37,582,152
Ensembl chrNW_004955405:37,512,201...37,582,152 		JBrowse link
G Il24 interleukin 24 acts_upstream_of_or_within ISO (MGI:3821693|PMID:18708357) MGI PMID:18708357 MGI:3821693 NCBI chrNW_004955406:42,431,845...42,437,392
Ensembl chrNW_004955406:42,432,795...42,437,016 		JBrowse link
G Il6 interleukin 6 ISO RGD PMID:19061939 RGD:2306937 NCBI chrNW_004955410:25,079,835...25,084,390 JBrowse link
G Ints1 integrator complex subunit 1 acts_upstream_of_or_within ISO (MGI:3722560|PMID:17544522) MGI PMID:17544522 MGI:3722560 NCBI chrNW_004955460:9,116,650...9,149,470
Ensembl chrNW_004955460:9,116,891...9,143,120 		JBrowse link
G Klf4 KLF transcription factor 4 involved_in ISO (PMID:20551324) BHF-UCL PMID:20551324 NCBI chrNW_004955419:19,280,311...19,284,097
Ensembl chrNW_004955419:19,280,235...19,285,174 		JBrowse link
G Lamp3 lysosomal associated membrane protein 3 involved_in ISO (PMID:25681212) ParkinsonsUK-UCL PMID:25681212 NCBI chrNW_004955420:24,155,793...24,185,366 JBrowse link
G Lamtor5 late endosomal/lysosomal adaptor, MAPK and MTOR activator 5 involved_in ISO (PMID:12773388) UniProt PMID:12773388 NCBI chrNW_004955435:13,896,320...13,900,742
Ensembl chrNW_004955435:13,896,320...13,900,754 		JBrowse link
G Map2k5 mitogen-activated protein kinase kinase 5 involved_in ISO PMID:20551324 BHF-UCL PMID:20551324 RGD:8553940 NCBI chrNW_004955450:8,207,577...8,458,258
Ensembl chrNW_004955450:8,203,569...8,458,258 		JBrowse link
G Mdm2 MDM2 proto-oncogene ISO caspase-2, caspase-3 RGD PMID:19850968 RGD:2317361 NCBI chrNW_004955458:15,264,028...15,287,290
Ensembl chrNW_004955458:15,263,739...15,286,808 		JBrowse link
G Mical1 microtubule associated monooxygenase, calponin and LIM domain containing 1 involved_in ISO (MGI:5142343|PMID:21730291) UniProt PMID:21730291 MGI:5142343 NCBI chrNW_004955411:34,484,536...34,495,154
Ensembl chrNW_004955411:34,484,653...34,493,877 		JBrowse link
G Mrtfa myocardin related transcription factor A acts_upstream_of_or_within ISO (MGI:2183867|PMID:12019265) MGI PMID:12019265 MGI:2183867 NCBI chrNW_004955413:26,139,060...26,311,272
Ensembl chrNW_004955413:26,139,843...26,222,580 		JBrowse link
G Naip NLR family apoptosis inhibitory protein involved_in ISO (PMID:11896143) UniProt PMID:11896143 NCBI chrNW_004955575:249,659...283,378 JBrowse link
G Nol3 nucleolar protein 3 involved_in ISO PMID:19001025 UniProt PMID:19001025 RGD:8553292 NCBI chrNW_004955484:9,443,090...9,447,142
Ensembl chrNW_004955484:9,443,090...9,447,095 		JBrowse link
G Nr4a1 nuclear receptor subfamily 4 group A member 1 acts_upstream_of_or_within ISO (MGI:2667579|PMID:12815108) MGI PMID:12815108 MGI:2667579 NCBI chrNW_004955547:2,404,532...2,426,882
Ensembl chrNW_004955547:2,404,532...2,431,050 		JBrowse link
G Pax2 paired box 2 involved_in ISO (PMID:10980123), (PMID:17357786) UniProt PMID:10980123 PMID:17357786 NCBI chrNW_004955485:9,351,913...9,430,607
Ensembl chrNW_004955485:9,350,087...9,430,607 		JBrowse link
G Por P450 (cytochrome) oxidoreductase ISO caspase-3 RGD PMID:19264869 RGD:2316785 NCBI chrNW_004955456:14,698,589...14,748,520
Ensembl chrNW_004955456:14,698,589...14,748,520 		JBrowse link
G Ptger2 prostaglandin E receptor 2 involved_in ISO (PMID:21716255) CAFA PMID:21716255 NCBI chrNW_004955409:10,760,801...10,775,197
Ensembl chrNW_004955409:10,757,888...10,774,688 		JBrowse link
G Ptgs2 prostaglandin-endoperoxide synthase 2 involved_in ISO (MGI:5474549|PMID:21716255) CAFA PMID:21716255 MGI:5474549 NCBI chrNW_004955406:25,077,988...25,086,259
Ensembl chrNW_004955406:25,079,945...25,086,171 		JBrowse link
G Ptma prothymosin alpha ISO RGD PMID:12522243 RGD:734494 NCBI chrNW_004955453:4,036,503...4,037,788 JBrowse link
G Rag1 recombination activating 1 acts_upstream_of_or_within ISO (MGI:3531056|PMID:15728238) MGI PMID:15728238 MGI:3531056 NCBI chrNW_004955422:9,891,878...9,928,569
Ensembl chrNW_004955422:9,891,878...9,919,504 		JBrowse link
G Rps6ka1 ribosomal protein S6 kinase A1 involved_in ISO (PMID:18402937) UniProt PMID:18402937 NCBI chrNW_004955452:5,905,561...5,938,096
Ensembl chrNW_004955452:5,904,762...5,939,091 		JBrowse link
G Rps6ka3 ribosomal protein S6 kinase A3 involved_in ISO (PMID:18402937) UniProt PMID:18402937 NCBI chrNW_004955509:600,415...701,833
Ensembl chrNW_004955509:600,284...701,837 		JBrowse link
G Sfn stratifin involved_in ISO (PMID:11574543) HGNC-UCL PMID:11574543 NCBI chrNW_004955452:6,217,519...6,218,481
Ensembl chrNW_004955452:6,217,698...6,218,444 		JBrowse link
G Sfrp2 secreted frizzled related protein 2 acts_upstream_of_or_within ISO (MGI:3702339|PMID:17251350) MGI PMID:17251350 MGI:3702339 NCBI chrNW_004955471:8,103,937...8,112,596
Ensembl chrNW_004955471:8,103,783...8,112,321 		JBrowse link
G Sh3rf1 SH3 domain containing ring finger 1 involved_in ISO (PMID:21586138) UniProt PMID:21586138 NCBI chrNW_004955403:36,989,509...37,141,188
Ensembl chrNW_004955403:36,988,811...37,142,401 		JBrowse link
G Siah2 siah E3 ubiquitin protein ligase 2 involved_in ISO (PMID:21586138) UniProt PMID:21586138 NCBI chrNW_004955448:1,907,478...1,926,445
Ensembl chrNW_004955448:1,907,401...1,926,445 		JBrowse link
G Snca synuclein alpha involved_in ISO (PMID:10818098) UniProt PMID:10818098 NCBI chrNW_004955405:854,011...962,741
Ensembl chrNW_004955405:853,946...965,403 		JBrowse link
G Src SRC proto-oncogene, non-receptor tyrosine kinase involved_in ISO (PMID:19767770) UniProt PMID:19767770 NCBI chrNW_004955445:19,213,210...19,227,670
Ensembl chrNW_004955445:19,215,161...19,228,695 		JBrowse link
G Thbs1 thrombospondin 1 involved_in ISO (PMID:18653767) UniProt PMID:18653767 NCBI chrNW_004955416:6,490,034...6,506,419
Ensembl chrNW_004955416:6,489,451...6,506,419 		JBrowse link
G Tnf tumor necrosis factor acts_upstream_of_or_within ISO (PMID:31124343) ARUK-UCL PMID:31124343 NCBI chrNW_004955437:117,267...119,899
Ensembl chrNW_004955437:117,206...120,700 		JBrowse link
G Triap1 TP53 regulated inhibitor of apoptosis 1 involved_in ISO (PMID:15735003) BHF-UCL PMID:15735003 NCBI chrNW_004955455:11,195,399...11,198,402
Ensembl chrNW_004955455:11,195,399...11,198,402 		JBrowse link
G Usp47 ubiquitin specific peptidase 47 involved_in ISO (PMID:19966869) UniProt PMID:19966869 NCBI chrNW_004955414:27,357,602...27,462,481
Ensembl chrNW_004955414:27,357,602...27,462,731 		JBrowse link
G Vegfa vascular endothelial growth factor A involved_in ISO (PMID:18386220) UniProt PMID:18386220 NCBI chrNW_004955437:9,527,445...9,541,908 JBrowse link
G Wnt9a Wnt family member 9A acts_upstream_of_or_within ISO (MGI:4368092|PMID:19422823) MGI PMID:19422823 MGI:4368092 NCBI chrNW_004955581:422,028...438,321
Ensembl chrNW_004955581:421,451...438,380 		JBrowse link
G Xiap X-linked inhibitor of apoptosis involved_in
acts_upstream_of_or_within		 ISO (PMID:11583623)
(MGI:2183141|PMID:12011074), (MGI:2183348|PMID:12153481)		 UniProt
MGI		 PMID:11583623 PMID:12011074 PMID:12153481 MGI:2183141 MGI:2183348 NCBI chrNW_004955473:10,823,795...10,878,256
Ensembl chrNW_004955473:10,827,435...10,840,604 		JBrowse link
negative regulation of cysteine-type endopeptidase activity involved in apoptotic signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Caap1 caspase activity and apoptosis inhibitor 1 involved_in ISO (PMID:21980415) UniProt PMID:21980415 NCBI chrNW_004955472:7,937,702...7,993,252
Ensembl chrNW_004955472:7,937,866...7,992,440 		JBrowse link
G Il9 interleukin 9 acts_upstream_of_or_within ISO (MGI:4367548|PMID:18551134) MGI PMID:18551134 MGI:4367548 NCBI chrNW_004955408:30,950,816...30,953,571
Ensembl chrNW_004955408:30,950,816...30,953,571 		JBrowse link
G Il9r interleukin 9 receptor acts_upstream_of_or_within ISO (MGI:4367548|PMID:18551134) MGI PMID:18551134 MGI:4367548 NCBI chrNW_004955442:17,115,207...17,128,899
Ensembl chrNW_004955442:17,117,429...17,127,451 		JBrowse link
G Mmp9 matrix metallopeptidase 9 involved_in ISO (PMID:22984561) CACAO PMID:22984561 NCBI chrNW_004955445:11,295,500...11,303,322
Ensembl chrNW_004955445:11,295,448...11,303,288 		JBrowse link
G Nle1 notchless homolog 1 acts_upstream_of_or_within ISO (MGI:5468737|PMID:23231322) MGI PMID:23231322 MGI:5468737 NCBI chrNW_004955481:9,821,329...9,830,350
Ensembl chrNW_004955481:9,821,329...9,830,555 		JBrowse link
G Park7 Parkinsonism associated deglycase involved_in ISO (PMID:21785459) ParkinsonsUK-UCL PMID:21785459 NCBI chrNW_004955486:4,974,130...4,985,927
Ensembl chrNW_004955486:4,969,497...4,985,885 		JBrowse link
G Pih1d1 PIH1 domain containing 1 involved_in ISO (PMID:21078300) UniProt PMID:21078300 NCBI chrNW_004955559:1,390,823...1,395,550
Ensembl chrNW_004955559:1,391,314...1,396,329 		JBrowse link
G Plaur plasminogen activator, urokinase receptor involved_in ISO (PMID:22984561) CACAO PMID:22984561 NCBI chrNW_004955555:1,378,505...1,393,395
Ensembl chrNW_004955555:1,378,793...1,393,324 		JBrowse link
negative regulation of cysteine-type endopeptidase activity involved in execution phase of apoptosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pak2 p21 (RAC1) activated kinase 2 involved_in ISO (PMID:21555521) UniProt PMID:21555521 NCBI chrNW_004955420:12,893,760...12,930,955
Ensembl chrNW_004955420:12,892,845...12,930,955 		JBrowse link
G Rffl ring finger and FYVE like domain containing E3 ubiquitin protein ligase involved_in ISO (PMID:15069192) UniProt PMID:15069192 NCBI chrNW_004955481:9,718,369...9,788,048
Ensembl chrNW_004955481:9,718,369...9,765,132 		JBrowse link
G Rnf34 ring finger protein 34 involved_in ISO (PMID:15069192) UniProt PMID:15069192 NCBI chrNW_004955482:6,889,112...6,905,139
Ensembl chrNW_004955482:6,891,546...6,905,139 		JBrowse link
negative regulation of endopeptidase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akt1 AKT serine/threonine kinase 1 involved_in ISO (PMID:18387192) BHF-UCL PMID:18387192 NCBI chrNW_004955538:3,208,711...3,224,386
Ensembl chrNW_004955538:3,208,710...3,229,904 		JBrowse link
G Crb2 crumbs cell polarity complex component 2 involved_in ISO (PMID:20299451) UniProt PMID:20299451 NCBI chrNW_004955419:4,604,883...4,626,675
Ensembl chrNW_004955419:4,607,507...4,626,608 		JBrowse link
G Fetub fetuin B involved_in ISO (MGI:5488517|PMID:23562279) UniProt PMID:23562279 MGI:5488517 NCBI chrNW_004955420:21,041,419...21,054,043
Ensembl chrNW_004955420:21,040,621...21,054,391 		JBrowse link
G Gapdh glyceraldehyde-3-phosphate dehydrogenase involved_in ISO (PMID:22832495) UniProt PMID:22832495 NCBI chrNW_004955413:4,162,467...4,166,783
Ensembl chrNW_004955413:4,162,467...4,166,783 		JBrowse link
G LOC102021956 alpha-2-macroglobulin ISO RGD PMID:19240864 RGD:7411612 NCBI chrNW_004955413:6,019,457...6,062,366
Ensembl chrNW_004955413:6,019,082...6,062,529 		JBrowse link
G Renbp renin binding protein ISO RGD PMID:11926999 RGD:727355 NCBI chrNW_004955580:610,112...615,019
Ensembl chrNW_004955580:609,964...615,027 		JBrowse link
G Serpinb1 serpin family B member 1 involved_in ISO (PMID:30692621) UniProt PMID:30692621 NCBI chrNW_004955465:10,541,562...10,551,417
Ensembl chrNW_004955465:10,541,485...10,550,290 		JBrowse link
G Serpinb13 serpin family B member 13 involved_in ISO (PMID:12504904) UniProt PMID:12504904 NCBI chrNW_004955402:47,376,973...47,395,267 JBrowse link
G Serpinb8 serpin family B member 8 involved_in ISO (PMID:8530382) UniProt PMID:8530382 NCBI chrNW_004955402:47,761,900...47,781,281
Ensembl chrNW_004955402:47,763,322...47,781,523 		JBrowse link
G Serpine1 serpin family E member 1 involved_in ISO (PMID:1695900) RGD
BHF-UCL		 PMID:1695900 PMID:10717410 RGD:8547889 NCBI chrNW_004955456:16,147,523...16,157,040
Ensembl chrNW_004955456:16,145,944...16,157,142 		JBrowse link
G Spock1 SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1 involved_in ISO (PMID:14511383) UniProt PMID:14511383 NCBI chrNW_004955408:31,954,622...32,465,463
Ensembl chrNW_004955408:31,957,882...32,465,461 		JBrowse link
G Spock3 SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3 involved_in ISO (PMID:11751414) UniProt PMID:11751414 NCBI chrNW_004955403:38,476,251...38,870,760
Ensembl chrNW_004955403:38,476,182...38,873,299 		JBrowse link
G Timp1 TIMP metallopeptidase inhibitor 1 involved_in ISO (PMID:3903517) UniProt PMID:3903517 NCBI chrNW_004955516:507,113...511,360
Ensembl chrNW_004955516:505,789...512,118 		JBrowse link
G Vtn vitronectin involved_in ISO (PMID:1695900) BHF-UCL PMID:1695900 NCBI chrNW_004955481:4,765,078...4,768,027
Ensembl chrNW_004955481:4,765,193...4,771,019 		JBrowse link
negative regulation of ER-associated ubiquitin-dependent protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sgta small glutamine rich tetratricopeptide repeat co-chaperone alpha involved_in ISO (PMID:23129660) UniProt PMID:23129660 NCBI chrNW_004955495:5,025,038...5,051,810
Ensembl chrNW_004955495:5,031,229...5,052,389 		JBrowse link
G Svip small VCP interacting protein involved_in ISO (PMID:17872946) UniProt PMID:17872946 NCBI chrNW_004955476:3,231,789...3,236,602 JBrowse link
G Usp14 ubiquitin specific peptidase 14 involved_in ISO (PMID:19135427) ParkinsonsUK-UCL PMID:19135427 NCBI chrNW_004955402:9,710,080...9,737,601
Ensembl chrNW_004955402:9,710,080...9,743,077 		JBrowse link
negative regulation of ERAD pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aqp11 aquaporin 11 involved_in ISO (MGI:3813160|PMID:18606867) UniProt PMID:18606867 MGI:3813160 NCBI chrNW_004955414:14,245,682...14,260,717
Ensembl chrNW_004955414:14,245,682...14,260,717 		JBrowse link
G Ubxn1 UBX domain protein 1 involved_in ISO (PMID:21135095) ParkinsonsUK-UCL PMID:21135095 NCBI chrNW_004955599:526,792...529,825
Ensembl chrNW_004955599:526,966...529,735 		JBrowse link
G Usp25 ubiquitin specific peptidase 25 involved_in ISO (PMID:22590560) ParkinsonsUK-UCL PMID:22590560 NCBI chrNW_004955407:17,429,299...17,572,138
Ensembl chrNW_004955407:17,429,299...17,575,262 		JBrowse link
negative regulation of membrane protein ectodomain proteolysis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Il10 interleukin 10 involved_in ISO (PMID:18383040) BHF-UCL PMID:18383040 NCBI chrNW_004955406:42,307,789...42,312,255
Ensembl chrNW_004955406:42,307,664...42,312,779 		JBrowse link
G Lrig2 leucine rich repeats and immunoglobulin like domains 2 acts_upstream_of_or_within ISO (MGI:5702499|PMID:26651291) MGI PMID:26651291 MGI:5702499 NCBI chrNW_004955435:16,468,300...16,522,503
Ensembl chrNW_004955435:16,468,509...16,521,868 		JBrowse link
G Ptpn3 protein tyrosine phosphatase non-receptor type 3 involved_in ISO (PMID:12207026) BHF-UCL PMID:12207026 NCBI chrNW_004955419:17,560,664...17,645,420
Ensembl chrNW_004955419:17,493,518...17,645,477 		JBrowse link
G Timp1 TIMP metallopeptidase inhibitor 1 involved_in ISO (PMID:12714508) UniProt PMID:12714508 NCBI chrNW_004955516:507,113...511,360
Ensembl chrNW_004955516:505,789...512,118 		JBrowse link
G Timp3 TIMP metallopeptidase inhibitor 3 involved_in ISO (PMID:18383040) BHF-UCL PMID:18383040 NCBI chrNW_004955405:41,613,976...41,655,813
Ensembl chrNW_004955405:41,613,966...41,655,813 		JBrowse link
negative regulation of metalloendopeptidase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Reck reversion inducing cysteine rich protein with kazal motifs involved_in ISO (PMID:18194466)
(MGI:5659805|PMID:24812324)		 UniProt
BHF-UCL		 PMID:18194466 PMID:24812324 MGI:5659805 NCBI chrNW_004955472:222,261...276,869
Ensembl chrNW_004955472:223,683...287,089 		JBrowse link
G Timp3 TIMP metallopeptidase inhibitor 3 involved_in ISO (MGI:5659805|PMID:24812324) BHF-UCL PMID:24812324 MGI:5659805 NCBI chrNW_004955405:41,613,976...41,655,813
Ensembl chrNW_004955405:41,613,966...41,655,813 		JBrowse link
negative regulation of metalloendopeptidase activity involved in amyloid precursor protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Picalm phosphatidylinositol binding clathrin assembly protein involved_in ISO (MGI:5432454|PMID:22539346) Alzheimers_University_of_Toronto PMID:22539346 MGI:5432454 NCBI chrNW_004955414:6,871,220...6,970,569
Ensembl chrNW_004955414:6,871,520...6,969,208 		JBrowse link
G Sorl1 sortilin related receptor 1 involved_in ISO (PMID:17855360), (PMID:21989385)
(MGI:3801250|PMID:18362153)		 Alzheimers_University_of_Toronto PMID:17855360 PMID:18362153 PMID:21989385 MGI:3801250 NCBI chrNW_004955412:22,421,984...22,576,179
Ensembl chrNW_004955412:22,421,984...22,576,179 		JBrowse link
negative regulation of metallopeptidase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Timp1 TIMP metallopeptidase inhibitor 1 involved_in ISO (PMID:9573338) UniProt PMID:9573338 NCBI chrNW_004955516:507,113...511,360
Ensembl chrNW_004955516:505,789...512,118 		JBrowse link
G Timp2 TIMP metallopeptidase inhibitor 2 involved_in ISO (PMID:9573338) UniProt PMID:9573338 NCBI chrNW_004955506:3,769,113...3,812,896
Ensembl chrNW_004955506:3,768,646...3,813,820 		JBrowse link
negative regulation of peptidase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cast calpastatin acts_upstream_of_or_within ISO (MGI:5295525|PMID:21849499) MGI PMID:21849499 MGI:5295525 NCBI chrNW_004955418:15,859,951...15,974,141
Ensembl chrNW_004955418:15,862,729...15,916,169 		JBrowse link
G Cst3 cystatin C involved_in ISO (PMID:18256700), (PMID:6203523), (PMID:7890620) BHF-UCL PMID:6203523 PMID:7890620 PMID:18256700 NCBI chrNW_004955415:30,507,972...30,512,109 JBrowse link
G Cst7 cystatin F involved_in ISO (PMID:15752368), (PMID:18256700), (PMID:22365146)
(MGI:6294189|PMID:18256700)		 ARUK-UCL PMID:15752368 PMID:18256700 PMID:22365146 MGI:6294189 NCBI chrNW_004955415:31,082,978...31,086,379
Ensembl chrNW_004955415:31,082,978...31,086,379 		JBrowse link
G Csta cystatin A involved_in ISO (PMID:20860624), (PMID:6203523) ComplexPortal PMID:6203523 PMID:20860624 NCBI chrNW_004955427:21,617,099...21,630,712
Ensembl chrNW_004955427:21,617,054...21,630,773 		JBrowse link
G Cstb cystatin B involved_in ISO (PMID:6203523) BHF-UCL PMID:6203523 NCBI chrNW_004955407:41,475,533...41,478,943
Ensembl chrNW_004955407:41,475,533...41,479,150 		JBrowse link
G Ctsb cathepsin B involved_in ISO (PMID:20860624) ComplexPortal PMID:20860624 NCBI chrNW_004955403:53,086,236...53,100,217
Ensembl chrNW_004955403:53,085,574...53,093,809 		JBrowse link
G Ecm1 extracellular matrix protein 1 involved_in ISO (PMID:16512877) UniProt PMID:16512877 NCBI chrNW_004955413:293,295...299,293
Ensembl chrNW_004955413:290,363...299,130 		JBrowse link
G Serpine2 serpin family E member 2 acts_upstream_of_or_within ISO (MGI:3521551|PMID:15509762), (MGI:3810206|PMID:18398001) MGI PMID:15509762 PMID:18398001 MGI:3521551 MGI:3810206 NCBI chrNW_004955453:10,049,822...10,076,155
Ensembl chrNW_004955453:10,027,104...10,076,645 		JBrowse link
G Spink1 serine peptidase inhibitor Kazal type 1 acts_upstream_of_or_within ISO (MGI:72783|PMID:3428272) MGI PMID:3428272 MGI:72783 NCBI chrNW_004955415:6,328,672...6,378,611
Ensembl chrNW_004955415:6,371,059...6,378,529 		JBrowse link
negative regulation of plasminogen activation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cpb2 carboxypeptidase B2 ISO RGD PMID:23369837 RGD:7243115 NCBI chrNW_004955518:3,740,348...3,803,540
Ensembl chrNW_004955518:3,740,348...3,803,539 		JBrowse link
G Ctsz cathepsin Z involved_in ISO (PMID:19433310) CAFA PMID:19433310 NCBI chrNW_004955445:586,901...597,753
Ensembl chrNW_004955445:586,902...597,753 		JBrowse link
G Serpine1 serpin family E member 1 involved_in ISO (PMID:8508955)
(MGI:4418017|PMID:19855083)
(PMID:18835034), (PMID:19855083)		 BHF-UCL PMID:8508955 PMID:18835034 PMID:19855083 MGI:4418017 NCBI chrNW_004955456:16,147,523...16,157,040
Ensembl chrNW_004955456:16,145,944...16,157,142 		JBrowse link
G Serpine2 serpin family E member 2 involved_in ISO (PMID:19855083)
(MGI:4418017|PMID:19855083)		 BHF-UCL PMID:19855083 MGI:4418017 NCBI chrNW_004955453:10,049,822...10,076,155
Ensembl chrNW_004955453:10,027,104...10,076,645 		JBrowse link
G Serpinf2 serpin family F member 2 involved_in ISO (PMID:134998) BHF-UCL PMID:134998 NCBI chrNW_004955481:1,441,262...1,449,078
Ensembl chrNW_004955481:1,442,010...1,449,242 		JBrowse link
G Thbs1 thrombospondin 1 involved_in ISO (PMID:6438154) BHF-UCL PMID:6438154 NCBI chrNW_004955416:6,490,034...6,506,419
Ensembl chrNW_004955416:6,489,451...6,506,419 		JBrowse link
negative regulation of proteasomal protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alad aminolevulinate dehydratase involved_in ISO (PMID:8175643) CAFA PMID:8175643 NCBI chrNW_004955419:14,093,010...14,104,376
Ensembl chrNW_004955419:14,093,010...14,104,545 		JBrowse link
G Gabarapl2 GABA type A receptor associated protein like 2 involved_in ISO (PMID:21669198) BHF-UCL PMID:21669198 NCBI chrNW_004955484:1,991,020...2,004,925
Ensembl chrNW_004955484:1,991,020...2,004,925 		JBrowse link
G Hsp90ab1 heat shock protein 90 alpha family class B member 1 involved_in ISO PMID:17517623
(MGI:6148636|PMID:17517623)		 ARUK-UCL PMID:17517623 MGI:6148636 RGD:13514081 NCBI chrNW_004955437:9,872,649...9,878,459
Ensembl chrNW_004955437:9,873,908...9,878,459 		JBrowse link
G Lamp3 lysosomal associated membrane protein 3 involved_in ISO (PMID:25681212) ParkinsonsUK-UCL PMID:25681212 NCBI chrNW_004955420:24,155,793...24,185,366 JBrowse link
G LOC102030058 protein SCO1 homolog, mitochondrial acts_upstream_of_or_within ISO (MGI:5643882|PMID:25683716) MGI PMID:25683716 MGI:5643882 NCBI chrNW_004955467:6,519,873...6,535,321
Ensembl chrNW_004955467:6,519,873...6,537,753 		JBrowse link
G Marchf7 membrane associated ring-CH-type finger 7 involved_in ISO (PMID:29295817) UniProt PMID:29295817 NCBI chrNW_004955449:13,834,561...13,875,864
Ensembl chrNW_004955449:13,835,811...13,859,699 		JBrowse link
G Ophn1 oligophrenin 1 involved_in ISO (MGI:5303043|PMID:21874017) UniProt PMID:21874017 MGI:5303043 NCBI chrNW_004955475:7,576,629...8,019,132
Ensembl chrNW_004955475:7,581,675...8,018,139 		JBrowse link
G Prkcg protein kinase C gamma involved_in ISO (MGI:5467682|PMID:23185022) UniProt PMID:23185022 MGI:5467682 NCBI chrNW_004955604:262,182...279,259
Ensembl chrNW_004955604:262,071...279,259 		JBrowse link
G Psme3ip1 proteasome activator subunit 3 interacting protein 1 involved_in ISO (PMID:29934401) UniProt PMID:29934401 NCBI chrNW_004955433:14,813,688...14,843,446
Ensembl chrNW_004955433:14,813,688...14,843,223 		JBrowse link
G Psmf1 proteasome inhibitor subunit 1 involved_in ISO (PMID:10764772) UniProt PMID:10764772 NCBI chrNW_004955596:381,080...414,307
Ensembl chrNW_004955596:381,068...416,055 		JBrowse link
G Usp19 ubiquitin specific peptidase 19 involved_in ISO (MGI:5614537|PMID:25088257) ParkinsonsUK-UCL PMID:25088257 MGI:5614537 NCBI chrNW_004955532:1,104,212...1,115,267
Ensembl chrNW_004955532:1,104,591...1,113,567 		JBrowse link
negative regulation of proteasomal ubiquitin-dependent protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bag5 BAG cochaperone 5 involved_in ISO (PMID:24475098) ParkinsonsUK-UCL PMID:24475098 NCBI chrNW_004955538:2,412,297...2,416,094
Ensembl chrNW_004955538:2,412,297...2,415,132 		JBrowse link
G Bag6 BAG cochaperone 6 involved_in ISO (MGI:3808636|PMID:18678708) UniProt PMID:18678708 MGI:3808636 NCBI chrNW_004955437:176,848...188,243
Ensembl chrNW_004955437:176,797...188,003 		JBrowse link
G Camlg calcium modulating ligand involved_in ISO (PMID:20553626) UniProt PMID:20553626 NCBI chrNW_004955408:29,968,962...29,977,896
Ensembl chrNW_004955408:29,968,934...29,979,794 		JBrowse link
G Ccar2 cell cycle and apoptosis regulator 2 involved_in ISO (PMID:23398316) UniProt PMID:23398316 NCBI chrNW_004955403:46,027,997...46,042,154
Ensembl chrNW_004955403:46,027,998...46,042,154 		JBrowse link
G Clec16a C-type lectin domain containing 16A acts_upstream_of_or_within ISO (MGI:5603233|PMID:24949970) MGI PMID:24949970 MGI:5603233 NCBI chrNW_004955442:7,369,616...7,584,052
Ensembl chrNW_004955442:7,368,952...7,584,703 		JBrowse link
G Ddrgk1 DDRGK domain containing 1 involved_in ISO (PMID:28263186) UniProt PMID:28263186 NCBI chrNW_004955415:14,085,404...14,098,220
Ensembl chrNW_004955415:14,085,404...14,098,856 		JBrowse link
G Eif3h eukaryotic translation initiation factor 3 subunit H involved_in ISO (PMID:32269044) FlyBase PMID:32269044 NCBI chrNW_004955417:22,757,781...22,846,349
Ensembl chrNW_004955417:22,754,395...22,846,618 		JBrowse link
G Fhit fragile histidine triad diadenosine triphosphatase involved_in ISO (PMID:15313915) UniProt PMID:15313915 NCBI chrNW_004955430:221,518...508,094 JBrowse link
G Gipc1 GIPC PDZ domain containing family member 1 involved_in ISO (MGI:3807767|PMID:11546783) BHF-UCL PMID:11546783 MGI:3807767 NCBI chrNW_004955415:33,067,689...33,077,749
Ensembl chrNW_004955415:33,067,689...33,074,730 		JBrowse link
G Hsp90ab1 heat shock protein 90 alpha family class B member 1 involved_in
acts_upstream_of_or_within		 ISO (PMID:24613385)
(PMID:16280321)		 UniProt
MGI		 PMID:16280321 PMID:24613385 NCBI chrNW_004955437:9,872,649...9,878,459
Ensembl chrNW_004955437:9,873,908...9,878,459 		JBrowse link
G Klhl40 kelch like family member 40 acts_upstream_of_or_within ISO (MGI:5586592|PMID:24960163) MGI PMID:24960163 MGI:5586592 NCBI chrNW_004955420:28,117,553...28,122,391
Ensembl chrNW_004955420:28,117,898...28,122,270 		JBrowse link
G Map1a microtubule associated protein 1A involved_in ISO (MGI:5703671|PMID:26609151) ARUK-UCL PMID:26609151 MGI:5703671 NCBI chrNW_004955416:10,052,964...10,073,318
Ensembl chrNW_004955416:10,053,010...10,071,421 		JBrowse link
G Mtm1 myotubularin 1 acts_upstream_of_or_within ISO (MGI:5510937|PMID:23695157) MGI PMID:23695157 MGI:5510937 NCBI chrNW_004955498:6,329,402...6,444,708
Ensembl chrNW_004955498:6,329,275...6,445,169 		JBrowse link
G N4bp1 NEDD4 binding protein 1 involved_in ISO (MGI:3829128|PMID:17592138) UniProt PMID:17592138 MGI:3829128 NCBI chrNW_004955474:6,796,068...6,814,906
Ensembl chrNW_004955474:6,796,066...6,814,906 		JBrowse link
G Nop53 NOP53 ribosome biogenesis factor involved_in ISO (PMID:22522597) UniProt PMID:22522597 NCBI chrNW_004955574:1,505,997...1,514,680
Ensembl chrNW_004955574:1,506,022...1,517,130 		JBrowse link
G Ogt O-linked N-acetylglucosamine (GlcNAc) transferase involved_in ISO (PMID:26678539) UniProt PMID:26678539 NCBI chrNW_004955475:11,062,258...11,112,252
Ensembl chrNW_004955475:11,062,076...11,114,169 		JBrowse link
G Park7 Parkinsonism associated deglycase involved_in ISO (PMID:17015834) ParkinsonsUK-UCL PMID:17015834 NCBI chrNW_004955486:4,974,130...4,985,927
Ensembl chrNW_004955486:4,969,497...4,985,885 		JBrowse link
G Pbk PDZ binding kinase acts_upstream_of_or_within ISO (MGI:5293269|PMID:21715333) MGI PMID:21715333 MGI:5293269 NCBI chrNW_004955403:50,332,167...50,353,147
Ensembl chrNW_004955403:50,330,981...50,352,570 		JBrowse link
G Phf20l1 PHD finger protein 20 like 1 involved_in ISO (PMID:24492612) UniProt PMID:24492612 NCBI chrNW_004955461:7,391,175...7,465,012
Ensembl chrNW_004955461:7,391,175...7,465,012 		JBrowse link
G Rpl11 ribosomal protein L11 involved_in ISO (MGI:5897550|PMID:21804542) UniProt PMID:21804542 MGI:5897550 NCBI chrNW_004955452:3,626,609...3,630,911
Ensembl chrNW_004955452:3,626,609...3,633,209 		JBrowse link
G Rybp RING1 and YY1 binding protein involved_in ISO (PMID:27060496) UniProt PMID:27060496 NCBI chrNW_004955421:15,728,778...15,803,150
Ensembl chrNW_004955421:15,728,580...15,803,150 		JBrowse link
G Sdcbp syndecan binding protein involved_in ISO (PMID:25893292) UniProt PMID:25893292 NCBI chrNW_004955454:17,093,930...17,113,491
Ensembl chrNW_004955454:17,089,232...17,113,484 		JBrowse link
G Senp1 SUMO specific peptidase 1 acts_upstream_of_or_within ISO (MGI:3818351|PMID:17981124) MGI PMID:17981124 MGI:3818351 NCBI chrNW_004955500:6,924,445...6,978,482
Ensembl chrNW_004955500:6,926,548...6,979,230 		JBrowse link
G Shh sonic hedgehog signaling molecule acts_upstream_of_or_within ISO (MGI:3624046|PMID:16611981) MGI PMID:16611981 MGI:3624046 NCBI chrNW_004955491:8,647,133...8,657,381 JBrowse link
G Smarcc1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1 acts_upstream_of_or_within ISO (MGI:5310666|PMID:22285184) MGI PMID:22285184 MGI:5310666 NCBI chrNW_004955420:24,594,057...24,729,108
Ensembl chrNW_004955420:24,593,830...24,729,108 		JBrowse link
G Taf9 TATA-box binding protein associated factor 9 involved_in ISO (PMID:11278372) BHF-UCL PMID:11278372 NCBI chrNW_004955575:74,506...76,272
Ensembl chrNW_004955575:74,506...76,272 		JBrowse link
G Tlk2 tousled like kinase 2 involved_in ISO (PMID:20016786) UniProt PMID:20016786 NCBI chrNW_004955478:9,100,863...9,229,448
Ensembl chrNW_004955478:9,100,863...9,231,281 		JBrowse link
G Ttc36 tetratricopeptide repeat domain 36 acts_upstream_of_or_within ISO (MGI:6362140|PMID:31537781) MGI PMID:31537781 MGI:6362140 NCBI chrNW_004955412:19,670,590...19,672,495 JBrowse link
G Ubxn1 UBX domain protein 1 involved_in ISO (PMID:20351172) UniProt PMID:20351172 NCBI chrNW_004955599:526,792...529,825
Ensembl chrNW_004955599:526,966...529,735 		JBrowse link
G Uchl5 ubiquitin C-terminal hydrolase L5 involved_in ISO (PMID:23770237) UniProt PMID:23770237 NCBI chrNW_004955406:30,432,652...30,468,741 JBrowse link
G Usp7 ubiquitin specific peptidase 7 involved_in ISO (PMID:26678539) UniProt PMID:26678539 NCBI chrNW_004955442:9,316,022...9,355,751
Ensembl chrNW_004955442:9,315,225...9,356,393 		JBrowse link
G Usp9x ubiquitin specific peptidase 9 X-linked involved_in ISO (PMID:33378666) UniProt PMID:33378666 NCBI chrNW_004955565:1,479,040...1,602,070
Ensembl chrNW_004955565:1,479,040...1,602,070 		JBrowse link
G Wac WW domain containing adaptor with coiled-coil involved_in ISO (PMID:22354037) BHF-UCL PMID:22354037 NCBI chrNW_004955462:2,358,842...2,435,644
Ensembl chrNW_004955462:2,358,842...2,435,628 		JBrowse link
negative regulation of protein deubiquitination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dnajb2 DnaJ heat shock protein family (Hsp40) member B2 involved_in ISO (PMID:15936278) BHF-UCL PMID:15936278 NCBI chrNW_004955453:14,147,286...14,154,396
Ensembl chrNW_004955453:14,148,070...14,154,670 		JBrowse link
G Trim21 tripartite motif containing 21 involved_in ISO (PMID:16472766) UniProt PMID:16472766 NCBI chrNW_004955414:20,066,109...20,077,331
Ensembl chrNW_004955414:20,070,359...20,077,595 		JBrowse link
negative regulation of protein K48-linked deubiquitination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Park7 Parkinsonism associated deglycase involved_in ISO (PMID:21097510) ParkinsonsUK-UCL PMID:21097510 NCBI chrNW_004955486:4,974,130...4,985,927
Ensembl chrNW_004955486:4,969,497...4,985,885 		JBrowse link
G Ubxn1 UBX domain protein 1 involved_in ISO (PMID:21135095) ParkinsonsUK-UCL PMID:21135095 NCBI chrNW_004955599:526,792...529,825
Ensembl chrNW_004955599:526,966...529,735 		JBrowse link
negative regulation of protein processing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acp4 acid phosphatase 4 involved_in ISO (PMID:15219672) UniProt PMID:15219672 NCBI chrNW_004955559:481,953...488,464
Ensembl chrNW_004955559:483,071...486,592 		JBrowse link
G Cdh1 cadherin 1 acts_upstream_of_or_within ISO (MGI:3763814|PMID:17344476) MGI PMID:17344476 MGI:3763814 NCBI chrNW_004955484:7,782,409...7,861,082
Ensembl chrNW_004955484:7,782,772...7,860,967 		JBrowse link
G Chac1 ChaC glutathione specific gamma-glutamylcyclotransferase 1 involved_in ISO (PMID:22445366) UniProt PMID:22445366 NCBI chrNW_004955416:7,828,917...7,831,368
Ensembl chrNW_004955416:7,828,482...7,832,391 		JBrowse link
G Fmr1 Fragile X messenger ribonucleoprotein 1 ISO Casp3 RGD PMID:22817682 RGD:11566024 NCBI chrNW_004955498:566,741...594,837
Ensembl chrNW_004955498:566,688...595,360 		JBrowse link
G Gas1 growth arrest specific 1 involved_in ISO (PMID:21357679) UniProt PMID:21357679 NCBI chrNW_004955432:727,784...729,096 JBrowse link
G Glg1 golgi glycoprotein 1 acts_upstream_of_or_within ISO (MGI:4829577|PMID:20530870) MGI PMID:20530870 MGI:4829577 NCBI chrNW_004955484:2,871,390...2,987,913
Ensembl chrNW_004955484:2,870,872...2,983,467 		JBrowse link
G Il1r2 interleukin 1 receptor type 2 acts_upstream_of_or_within ISO (MGI:5468848|PMID:23395675) MGI PMID:23395675 MGI:5468848 NCBI chrNW_004955470:7,518,565...7,562,219
Ensembl chrNW_004955470:7,518,663...7,559,470 		JBrowse link
G Lrrk2 leucine rich repeat kinase 2 involved_in ISO (PMID:21370995) ParkinsonsUK-UCL PMID:21370995 NCBI chrNW_004955505:84,324...216,923
Ensembl chrNW_004955505:81,796...216,923 		JBrowse link
G Mdm2 MDM2 proto-oncogene ISO caspase-3 RGD PMID:19638633 RGD:2317364 NCBI chrNW_004955458:15,264,028...15,287,290
Ensembl chrNW_004955458:15,263,739...15,286,808 		JBrowse link
G Ppp1r15a protein phosphatase 1 regulatory subunit 15A ISO Casp3 RGD PMID:21925170 RGD:9999170 NCBI chrNW_004955559:1,750,227...1,753,607
Ensembl chrNW_004955559:1,750,168...1,753,629 		JBrowse link
G Snx12 sorting nexin 12 involved_in ISO (PMID:22709416) UniProt PMID:22709416 NCBI chrNW_004955475:10,632,938...10,641,452
Ensembl chrNW_004955475:10,474,697...10,641,723 		JBrowse link
G Tmem59 transmembrane protein 59 involved_in ISO (PMID:20427278) UniProt PMID:20427278 NCBI chrNW_004955464:5,193,173...5,222,089
Ensembl chrNW_004955464:5,193,272...5,222,974 		JBrowse link
G Tmem98 transmembrane protein 98 involved_in ISO (MGI:6258499|PMID:30249802) UniProt PMID:30249802 MGI:6258499 NCBI chrNW_004955481:7,788,066...7,797,433
Ensembl chrNW_004955481:7,785,967...7,798,575 		JBrowse link
negative regulation of protein processing involved in protein targeting to mitochondrion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sirt4 sirtuin 4 ISO RGD PMID:24029877 RGD:9586053 NCBI chrNW_004955455:11,322,812...11,334,786
Ensembl chrNW_004955455:11,324,479...11,334,817 		JBrowse link
negative regulation of proteolysis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akt1 AKT serine/threonine kinase 1 involved_in ISO (PMID:18387192) BHF-UCL PMID:18387192 NCBI chrNW_004955538:3,208,711...3,224,386
Ensembl chrNW_004955538:3,208,710...3,229,904 		JBrowse link
G Bag6 BAG cochaperone 6 involved_in ISO (MGI:3774040|PMID:18056262) UniProt PMID:18056262 MGI:3774040 NCBI chrNW_004955437:176,848...188,243
Ensembl chrNW_004955437:176,797...188,003 		JBrowse link
G Cdk5 cyclin dependent kinase 5 involved_in ISO (PMID:24548080) ParkinsonsUK-UCL PMID:24548080 NCBI chrNW_004955491:5,491,744...5,497,280
Ensembl chrNW_004955491:5,491,744...5,497,280 		JBrowse link
G Cln3 CLN3 lysosomal/endosomal transmembrane protein, battenin acts_upstream_of_or_within ISO (MGI:1346962|PMID:10527801) MGI PMID:10527801 MGI:1346962 NCBI chrNW_004955493:6,696,520...6,707,849
Ensembl chrNW_004955493:6,696,241...6,707,849 		JBrowse link
G Cst3 cystatin C involved_in ISO (PMID:3488317) UniProt PMID:3488317 NCBI chrNW_004955415:30,507,972...30,512,109 JBrowse link
G Csta cystatin A involved_in ISO (PMID:3488317) UniProt PMID:3488317 NCBI chrNW_004955427:21,617,099...21,630,712
Ensembl chrNW_004955427:21,617,054...21,630,773 		JBrowse link
G Cstb cystatin B involved_in ISO (PMID:3488317) UniProt PMID:3488317 NCBI chrNW_004955407:41,475,533...41,478,943
Ensembl chrNW_004955407:41,475,533...41,479,150 		JBrowse link
G F2 coagulation factor II, thrombin involved_in ISO (PMID:1695900) BHF-UCL PMID:1695900 NCBI chrNW_004955422:1,356,675...1,367,788
Ensembl chrNW_004955422:1,356,769...1,367,517 		JBrowse link
G Hdac6 histone deacetylase 6 involved_in ISO (PMID:18356165) BHF-UCL PMID:18356165 NCBI chrNW_004955543:348,314...378,391
Ensembl chrNW_004955543:348,019...378,071 		JBrowse link
G Ide insulin degrading enzyme ISO inhibits activity of the multicatalytic proteinase complex (proteasome) RGD PMID:9000694 RGD:1627643 NCBI chrNW_004955425:819,461...926,440
Ensembl chrNW_004955425:847,615...926,318 		JBrowse link
G Ins insulin involved_in ISO (PMID:3553851) BHF-UCL PMID:3553851 NCBI chrNW_004955422:13,909,408...13,910,419
Ensembl chrNW_004955422:13,909,407...13,910,419 		JBrowse link
G Kng1 kininogen 1 involved_in ISO (PMID:3488317) RGD
UniProt		 PMID:3356189 PMID:3488317 RGD:1600550 NCBI chrNW_004955420:20,989,197...21,016,084 JBrowse link
G Nr1h2 nuclear receptor subfamily 1 group H member 2 involved_in ISO (MGI:3822255|PMID:18806227) BHF-UCL PMID:18806227 MGI:3822255 NCBI chrNW_004955559:731,630...736,973
Ensembl chrNW_004955559:730,670...737,505 		JBrowse link
G Nr1h3 nuclear receptor subfamily 1 group H member 3 involved_in ISO (MGI:3822255|PMID:18806227) BHF-UCL PMID:18806227 MGI:3822255 NCBI chrNW_004955422:940,310...954,170
Ensembl chrNW_004955422:940,310...949,049 		JBrowse link
G Pik3r1 phosphoinositide-3-kinase regulatory subunit 1 ISO RGD PMID:15161606 RGD:1625251 NCBI chrNW_004955446:1,020,707...1,098,327
Ensembl chrNW_004955446:1,020,043...1,098,820 		JBrowse link
G Plat plasminogen activator, tissue type involved_in ISO (PMID:1695900) BHF-UCL PMID:1695900 NCBI chrNW_004955536:730,962...754,333
Ensembl chrNW_004955536:730,981...756,394 		JBrowse link
G Rab23 RAB23, member RAS oncogene family acts_upstream_of_or_within ISO (MGI:3612806|PMID:16364285) MGI PMID:16364285 MGI:3612806 NCBI chrNW_004955502:2,947,170...2,980,634
Ensembl chrNW_004955502:2,950,562...2,980,634 		JBrowse link
G Serpina5 serpin family A member 5 ISO RGD PMID:16088033 RGD:1580291 NCBI chrNW_004955438:17,787,398...17,796,013
Ensembl chrNW_004955438:17,787,399...17,796,414 		JBrowse link
G Serpine2 serpin family E member 2 involved_in ISO (PMID:17379830), (PMID:3997857) BHF-UCL PMID:3997857 PMID:17379830 RGD:8553298 NCBI chrNW_004955453:10,049,822...10,076,155
Ensembl chrNW_004955453:10,027,104...10,076,645 		JBrowse link
G Spink5 serine peptidase inhibitor Kazal type 5 acts_upstream_of_or_within ISO (MGI:3055648|PMID:15466487) MGI PMID:15466487 MGI:3055648 NCBI chrNW_004955415:6,118,616...6,186,632 JBrowse link
G Timp2 TIMP metallopeptidase inhibitor 2 ISO RGD PMID:17532789 RGD:2290425 NCBI chrNW_004955506:3,769,113...3,812,896
Ensembl chrNW_004955506:3,768,646...3,813,820 		JBrowse link
G Timp3 TIMP metallopeptidase inhibitor 3 ISO RGD PMID:17532789 RGD:2290425 NCBI chrNW_004955405:41,613,976...41,655,813
Ensembl chrNW_004955405:41,613,966...41,655,813 		JBrowse link
G Tm4sf20 transmembrane 4 L six family member 20 involved_in ISO (PMID:25310401), (PMID:27499293) UniProt PMID:25310401 PMID:27499293 NCBI chrNW_004955453:7,201,738...7,219,322
Ensembl chrNW_004955453:7,201,738...7,219,322 		JBrowse link
G Tp53 tumor protein p53 acts_upstream_of_or_within ISO (MGI:5468878|PMID:23277542) MGI PMID:23277542 MGI:5468878 NCBI chrNW_004955467:9,241,391...9,256,716
Ensembl chrNW_004955467:9,252,130...9,255,928 		JBrowse link
negative regulation of proteolysis involved in protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Efna1 ephrin A1 involved_in ISO (PMID:24217950) ARUK-UCL PMID:24217950 NCBI chrNW_004955545:1,610,929...1,617,217
Ensembl chrNW_004955545:1,610,929...1,617,460 		JBrowse link
G Epha4 EPH receptor A4 involved_in ISO (PMID:24217950) ARUK-UCL PMID:24217950 NCBI chrNW_004955453:12,099,800...12,240,199
Ensembl chrNW_004955453:12,099,757...12,240,199 		JBrowse link
negative regulation of SCF-dependent proteasomal ubiquitin-dependent catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pabpn1l PABPN1 like, cytoplasmic acts_upstream_of_or_within ISO (MGI:6509513|PMID:32558204) MGI PMID:32558204 MGI:6509513 NCBI chrNW_004955541:2,718,076...2,720,322
Ensembl chrNW_004955541:2,718,076...2,720,322 		JBrowse link
G Styx serine/threonine/tyrosine interacting protein involved_in ISO (PMID:28007894) UniProt PMID:28007894 NCBI chrNW_004955409:10,428,556...10,445,384
Ensembl chrNW_004955409:10,428,556...10,445,880 		JBrowse link
negative regulation of serine-type endopeptidase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC102021597 alpha-1-antiproteinase S-like ISO RGD PMID:19240864 RGD:7411612 NCBI chrNW_004955438:17,920,200...17,929,105 JBrowse link
G Spink1 serine peptidase inhibitor Kazal type 1 acts_upstream_of_or_within ISO (MGI:5428115|PMID:22228629)
(MGI:4442135|PMID:20110462)		 RGD
MGI		 PMID:12771515 PMID:20110462 PMID:22228629 MGI:4442135 MGI:5428115 RGD:724699 NCBI chrNW_004955415:6,328,672...6,378,611
Ensembl chrNW_004955415:6,371,059...6,378,529 		JBrowse link
G Spink2 serine peptidase inhibitor Kazal type 2 acts_upstream_of_or_within ISO (MGI:5287926|PMID:21705336) MGI PMID:21705336 MGI:5287926 NCBI chrNW_004955447:14,285,248...14,291,835 JBrowse link
G Spink5 serine peptidase inhibitor Kazal type 5 involved_in ISO (MGI:3770082|PMID:17012259) UniProt PMID:17012259 MGI:3770082 NCBI chrNW_004955415:6,118,616...6,186,632 JBrowse link
G Spink6 serine peptidase inhibitor Kazal type 6 acts_upstream_of_or_within ISO (MGI:5560845|PMID:24352040) MGI PMID:24352040 MGI:5560845 NCBI chrNW_004955415:6,041,712...6,053,963
Ensembl chrNW_004955415:6,041,712...6,053,963 		JBrowse link
negative regulation of serine-type peptidase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Spink5 serine peptidase inhibitor Kazal type 5 acts_upstream_of_or_within ISO (MGI:4440399|PMID:20179351) MGI PMID:20179351 MGI:4440399 NCBI chrNW_004955415:6,118,616...6,186,632 JBrowse link
negative regulation of ubiquitin-dependent protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Anks1a ankyrin repeat and sterile alpha motif domain containing 1A acts_upstream_of_or_within ISO (MGI:4461099|PMID:20100865) MGI PMID:20100865 MGI:4461099 NCBI chrNW_004955437:2,916,598...3,070,771
Ensembl chrNW_004955437:2,916,598...3,070,771 		JBrowse link
G Csnk2a1 casein kinase 2 alpha 1 involved_in ISO (PMID:28031292) ARUK-UCL PMID:28031292 NCBI chrNW_004955597:326,601...397,112 JBrowse link
G Csnk2a2 casein kinase 2 alpha 2 involved_in ISO (PMID:28031292) ARUK-UCL PMID:28031292 NCBI chrNW_004955433:15,677,788...15,718,894
Ensembl chrNW_004955433:15,674,116...15,718,894 		JBrowse link
G Hfe homeostatic iron regulator involved_in ISO (PMID:24904118) BHF-UCL PMID:24904118 NCBI chrNW_004955483:933,269...941,070
Ensembl chrNW_004955483:932,352...941,143 		JBrowse link
G Hipk2 homeodomain interacting protein kinase 2 involved_in ISO (PMID:21628596) FlyBase PMID:21628596 NCBI chrNW_004955494:3,365,826...3,554,735
Ensembl chrNW_004955494:3,393,049...3,554,844 		JBrowse link
G Pdcl3 phosducin like 3 acts_upstream_of_or_within ISO (PMID:23792958) MGI PMID:23792958 NCBI chrNW_004955470:6,553,450...6,563,814 JBrowse link
G Pml PML nuclear body scaffold involved_in ISO (PMID:15195100) UniProt PMID:15195100 NCBI chrNW_004955450:3,654,854...3,692,057
Ensembl chrNW_004955450:3,656,498...3,692,406 		JBrowse link
G Prmt6 protein arginine methyltransferase 6 involved_in ISO (MGI:5688415|PMID:26070566) UniProt PMID:26070566 MGI:5688415 NCBI chrNW_004955435:10,816,787...10,818,047
Ensembl chrNW_004955435:10,816,831...10,817,961 		JBrowse link
G Psen1 presenilin 1 involved_in ISO (MGI:4887523|PMID:20208556) BHF-UCL PMID:20208556 MGI:4887523 NCBI chrNW_004955523:2,128,529...2,210,737
Ensembl chrNW_004955523:2,128,529...2,210,737 		JBrowse link
G Psen2 presenilin 2 involved_in ISO (MGI:4887523|PMID:20208556) BHF-UCL PMID:20208556 MGI:4887523 NCBI chrNW_004955406:5,727,367...5,748,798
Ensembl chrNW_004955406:5,727,367...5,752,234 		JBrowse link
G Qrich2 glutamine rich 2 involved_in ISO (PMID:30683861)
(MGI:6277293|PMID:30683861)		 UniProt PMID:30683861 MGI:6277293 NCBI chrNW_004955506:5,990,070...6,015,808 JBrowse link
G Rpl11 ribosomal protein L11 involved_in ISO (PMID:18560357) CAFA PMID:18560357 NCBI chrNW_004955452:3,626,609...3,630,911
Ensembl chrNW_004955452:3,626,609...3,633,209 		JBrowse link
G Rpl23 ribosomal protein L23 involved_in ISO (PMID:15314173) CAFA PMID:15314173 NCBI chrNW_004955451:13,892,880...13,898,079
Ensembl chrNW_004955451:13,892,880...13,898,079 		JBrowse link
G Rpl5 ribosomal protein L5 involved_in ISO (PMID:18560357) CAFA PMID:18560357 NCBI chrNW_004955423:1,748,809...1,758,622
Ensembl chrNW_004955423:1,748,809...1,758,622 		JBrowse link
G Rps7 ribosomal protein S7 involved_in ISO (PMID:17310983) CAFA PMID:17310983 NCBI chrNW_004955487:3,793,168...3,798,007
Ensembl chrNW_004955487:3,792,870...3,798,153 		JBrowse link
G Sgta small glutamine rich tetratricopeptide repeat co-chaperone alpha involved_in ISO (PMID:23129660) UniProt PMID:23129660 NCBI chrNW_004955495:5,025,038...5,051,810
Ensembl chrNW_004955495:5,031,229...5,052,389 		JBrowse link
G Sufu SUFU negative regulator of hedgehog signaling acts_upstream_of_or_within ISO (MGI:4355593|PMID:19684112) MGI PMID:19684112 MGI:4355593 NCBI chrNW_004955485:7,805,244...7,925,414
Ensembl chrNW_004955485:7,808,131...7,925,677 		JBrowse link
G Taf1 TATA-box binding protein associated factor 1 involved_in ISO (PMID:17237821) ParkinsonsUK-UCL PMID:17237821 NCBI chrNW_004955475:10,930,175...11,006,876
Ensembl chrNW_004955475:10,930,192...11,005,724 		JBrowse link
G Wnt1 Wnt family member 1 acts_upstream_of_or_within ISO (MGI:3628833|PMID:16601693) MGI PMID:16601693 MGI:3628833 NCBI chrNW_004955500:7,797,063...7,811,142
Ensembl chrNW_004955500:7,797,060...7,811,167 		JBrowse link
negative regulation of ubiquitin-specific protease activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Park7 Parkinsonism associated deglycase involved_in ISO (PMID:21097510) ParkinsonsUK-UCL PMID:21097510 NCBI chrNW_004955486:4,974,130...4,985,927
Ensembl chrNW_004955486:4,969,497...4,985,885 		JBrowse link
G Ubxn1 UBX domain protein 1 involved_in ISO (PMID:21135095) ParkinsonsUK-UCL PMID:21135095 NCBI chrNW_004955599:526,792...529,825
Ensembl chrNW_004955599:526,966...529,735 		JBrowse link
positive regulation of aspartic-type endopeptidase activity involved in amyloid precursor protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ager advanced glycosylation end-product specific receptor involved_in ISO (PMID:22406537) ARUK-UCL PMID:22406537 NCBI chrNW_004955437:645,482...648,607
Ensembl chrNW_004955437:645,897...648,479 		JBrowse link
G App amyloid beta precursor protein involved_in ISO (PMID:22406537) ARUK-UCL PMID:22406537 NCBI chrNW_004955407:25,725,259...25,973,582
Ensembl chrNW_004955407:25,722,849...25,974,268 		JBrowse link
G Efna1 ephrin A1 involved_in ISO (PMID:24217950) ARUK-UCL PMID:24217950 NCBI chrNW_004955545:1,610,929...1,617,217
Ensembl chrNW_004955545:1,610,929...1,617,460 		JBrowse link
G Efna3 ephrin A3 involved_in ISO (PMID:24217950) ARUK-UCL PMID:24217950 NCBI chrNW_004955545:1,570,351...1,578,610
Ensembl chrNW_004955545:1,570,339...1,577,639 		JBrowse link
G Epha4 EPH receptor A4 involved_in ISO (PMID:24217950) ARUK-UCL PMID:24217950 NCBI chrNW_004955453:12,099,800...12,240,199
Ensembl chrNW_004955453:12,099,757...12,240,199 		JBrowse link
G Lyn LYN proto-oncogene, Src family tyrosine kinase involved_in ISO (PMID:24217950) ARUK-UCL PMID:24217950 NCBI chrNW_004955454:15,025,967...15,111,142
Ensembl chrNW_004955454:15,035,979...15,111,142 		JBrowse link
G Picalm phosphatidylinositol binding clathrin assembly protein involved_in ISO (MGI:5432454|PMID:22539346) Alzheimers_University_of_Toronto PMID:22539346 MGI:5432454 NCBI chrNW_004955414:6,871,220...6,970,569
Ensembl chrNW_004955414:6,871,520...6,969,208 		JBrowse link
G Rock2 Rho associated coiled-coil containing protein kinase 2 involved_in ISO (PMID:24305806)
(MGI:6114922|PMID:24305806)		 ARUK-UCL PMID:24305806 MGI:6114922 NCBI chrNW_004955487:5,856,190...5,972,408
Ensembl chrNW_004955487:5,859,204...5,972,401 		JBrowse link
positive regulation of aspartic-type peptidase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Grn granulin precursor involved_in ISO (PMID:28453791)
(MGI:5907533|PMID:28453791)		 UniProt PMID:28453791 MGI:5907533 NCBI chrNW_004955451:17,368,600...17,371,981
Ensembl chrNW_004955451:17,368,428...17,372,377 		JBrowse link
positive regulation of cysteine-type endopeptidase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bbc3 BCL2 binding component 3 involved_in ISO (MGI:4879048|PMID:21159964), (MGI:5448480|PMID:22761832) UniProt PMID:21159964 PMID:22761832 MGI:4879048 MGI:5448480 NCBI chrNW_004955574:1,167,790...1,174,966
Ensembl chrNW_004955574:1,167,242...1,174,966 		JBrowse link
G Fyn FYN proto-oncogene, Src family tyrosine kinase involved_in ISO PMID:17526495 ARUK-UCL PMID:17526495 RGD:13506268 NCBI chrNW_004955411:36,403,156...36,597,660
Ensembl chrNW_004955411:36,401,842...36,512,054 		JBrowse link
G Grin1 glutamate ionotropic receptor NMDA type subunit 1 involved_in ISO PMID:17526495 ARUK-UCL PMID:17526495 RGD:13506268 NCBI chrNW_004955513:5,154,864...5,178,636
Ensembl chrNW_004955513:5,154,864...5,178,636 		JBrowse link
G Grin2b glutamate ionotropic receptor NMDA type subunit 2B involved_in ISO PMID:17526495 ARUK-UCL PMID:17526495 RGD:13506268 NCBI chrNW_004955413:10,358,931...10,780,004
Ensembl chrNW_004955413:10,376,597...10,779,145 		JBrowse link
G Mefv MEFV innate immunity regulator, pyrin involved_in ISO (PMID:19158676) UniProt PMID:19158676 NCBI chrNW_004955442:14,068,436...14,093,889
Ensembl chrNW_004955442:14,068,348...14,094,016 		JBrowse link
G Nek5 NIMA related kinase 5 acts_upstream_of_or_within ISO (MGI:5500844|PMID:23727203) MGI PMID:23727203 MGI:5500844 NCBI chrNW_004955431:5,312,243...5,378,998
Ensembl chrNW_004955431:5,318,987...5,377,398 		JBrowse link
G Ttbk1 tau tubulin kinase 1 involved_in ISO (PMID:19118186) ARUK-UCL PMID:19118186 NCBI chrNW_004955437:9,161,880...9,195,098
Ensembl chrNW_004955437:9,165,414...9,197,612 		JBrowse link
G Usp50 ubiquitin specific peptidase 50 acts_upstream_of_or_within ISO (MGI:5888801|PMID:28094437)
(PMID:28094437)		 MGI PMID:28094437 MGI:5888801 NCBI chrNW_004955409:3,788,723...3,838,077
Ensembl chrNW_004955409:3,788,903...3,837,983 		JBrowse link
positive regulation of cysteine-type endopeptidase activity involved in apoptotic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvr1c activin A receptor type 1C involved_in ISO (PMID:15150278) BHF-UCL PMID:15150278 NCBI chrNW_004955449:15,814,230...15,864,747
Ensembl chrNW_004955449:15,813,856...15,858,537 		JBrowse link
G App amyloid beta precursor protein involved_in ISO (PMID:21803450) ARUK-UCL PMID:21803450 NCBI chrNW_004955407:25,725,259...25,973,582
Ensembl chrNW_004955407:25,722,849...25,974,268 		JBrowse link
G Arl6ip5 ADP ribosylation factor like GTPase 6 interacting protein 5 involved_in ISO (PMID:18387645) UniProt PMID:18387645 NCBI chrNW_004955421:18,747,729...18,766,559
Ensembl chrNW_004955421:18,747,729...18,766,408 		JBrowse link
G Arrb1 arrestin beta 1 ISO RGD PMID:19171933 RGD:5510006 NCBI chrNW_004955414:16,478,843...16,568,050
Ensembl chrNW_004955414:16,478,843...16,562,135 		JBrowse link
G Bad BCL2 associated agonist of cell death involved_in ISO (PMID:18402937) UniProt PMID:18402937 NCBI chrNW_004955422:20,795,585...20,809,039
Ensembl chrNW_004955422:20,795,676...20,809,245 		JBrowse link
G Bcap31 B cell receptor associated protein 31 involved_in ISO (PMID:21183955) UniProt PMID:21183955 NCBI chrNW_004955580:429,223...459,168
Ensembl chrNW_004955580:428,644...459,168 		JBrowse link
G Bcl10 BCL10 immune signaling adaptor involved_in
acts_upstream_of_or_within		 ISO (PMID:22267217)
(MGI:1355482|PMID:10753917)		 ARUK-UCL
MGI		 PMID:10753917 PMID:22267217 MGI:1355482 NCBI chrNW_004955423:8,710,231...8,720,530
Ensembl chrNW_004955423:8,709,890...8,722,050 		JBrowse link
G Bcl2l11 BCL2 like 11 acts_upstream_of_or_within ISO (MGI:3581932|PMID:15967824) MGI PMID:15967824 MGI:3581932 NCBI chrNW_004955470:2,740,682...2,780,225 JBrowse link
G Card9 caspase recruitment domain family member 9 involved_in ISO (PMID:22267217) ARUK-UCL PMID:22267217 NCBI chrNW_004955513:4,350,873...4,359,345
Ensembl chrNW_004955513:4,350,147...4,359,345 		JBrowse link
G Ccn1 cellular communication network factor 1 acts_upstream_of_or_within ISO (MGI:3849354|PMID:19364818) MGI PMID:19364818 MGI:3849354 NCBI chrNW_004955423:8,416,498...8,419,029
Ensembl chrNW_004955423:8,413,725...8,419,166 		JBrowse link
G Ccn2 cellular communication network factor 2 ISO caspase 3/7 RGD PMID:19625611 RGD:2314487 NCBI chrNW_004955436:12,523,602...12,526,986
Ensembl chrNW_004955436:12,522,944...12,526,480 		JBrowse link
G Ctsd cathepsin D involved_in ISO (PMID:12107093) ARUK-UCL PMID:12107093 NCBI chrNW_004955422:13,576,315...13,584,267
Ensembl chrNW_004955422:13,576,202...13,584,298 		JBrowse link
G Dapk1 death associated protein kinase 1 involved_in ISO (PMID:16132846) UniProt PMID:16132846 NCBI chrNW_004955432:29,925...254,327
Ensembl chrNW_004955432:29,197...254,379 		JBrowse link
G Ddx3x DEAD-box helicase 3 X-linked involved_in ISO (PMID:16301996) UniProt PMID:16301996 NCBI chrNW_004955565:1,387,043...1,403,624
Ensembl chrNW_004955565:1,386,973...1,404,220 		JBrowse link
G F2r coagulation factor II thrombin receptor involved_in ISO (PMID:10692450) BHF-UCL PMID:10692450 NCBI chrNW_004955425:24,144,905...24,164,498 JBrowse link
G Fas Fas cell surface death receptor ISO RGD PMID:15519734 RGD:8662904 NCBI chrNW_004955425:3,961,671...3,987,513
Ensembl chrNW_004955425:3,961,013...3,987,455 		JBrowse link
G Fis1 fission, mitochondrial 1 involved_in ISO (PMID:21183955) UniProt PMID:21183955 NCBI chrNW_004955456:16,057,158...16,060,623
Ensembl chrNW_004955456:16,038,221...16,060,623 		JBrowse link
G Foxl2 forkhead box L2 involved_in ISO (PMID:16153597) UniProt PMID:16153597 NCBI chrNW_004955501:83,965...84,476 JBrowse link
G Gper1 G protein-coupled estrogen receptor 1 involved_in ISO PMID:23907461 UniProt PMID:23907461 RGD:8553942 NCBI chrNW_004955460:8,790,798...8,794,902
Ensembl chrNW_004955460:8,790,798...8,794,902 		JBrowse link
G Gramd4 GRAM domain containing 4 involved_in ISO (PMID:15565177) UniProt PMID:15565177 NCBI chrNW_004955413:30,603,820...30,656,940
Ensembl chrNW_004955413:30,603,580...30,656,940 		JBrowse link
G Hmgb1 high mobility group box 1 involved_in ISO (PMID:19800306) UniProt PMID:19800306 NCBI chrNW_004955431:15,373,207...15,377,339
Ensembl chrNW_004955431:15,373,207...15,377,339 		JBrowse link
G Hsf1 heat shock transcription factor 1 ISO RGD PMID:21192280 RGD:10403035 NCBI chrNW_004955454:2,907,265...2,932,352
Ensembl chrNW_004955454:2,907,265...2,932,351 		JBrowse link
G Htra2 HtrA serine peptidase 2 involved_in ISO (PMID:11583623), (PMID:11604410), (PMID:17297443)
(PMID:11967569)		 ParkinsonsUK-UCL
CAFA		 PMID:11583623 PMID:11604410 PMID:11967569 PMID:17297443 NCBI chrNW_004955424:11,255,756...11,259,170
Ensembl chrNW_004955424:11,255,756...11,259,170 		JBrowse link
G Il24 interleukin 24 acts_upstream_of_or_within ISO (MGI:3821693|PMID:18708357) MGI PMID:18708357 MGI:3821693 NCBI chrNW_004955406:42,431,845...42,437,392
Ensembl chrNW_004955406:42,432,795...42,437,016 		JBrowse link
G Malt1 MALT1 paracaspase involved_in ISO (PMID:22267217) ARUK-UCL PMID:22267217 NCBI chrNW_004955402:42,919,480...42,968,873
Ensembl chrNW_004955402:42,911,649...42,972,429 		JBrowse link
G Map3k5 mitogen-activated protein kinase kinase kinase 5 involved_in ISO (PMID:20674765) BHF-UCL PMID:20674765 NCBI chrNW_004955439:162,499...376,919
Ensembl chrNW_004955439:163,103...377,808 		JBrowse link
G Mapk9 mitogen-activated protein kinase 9 ISO RGD PMID:14522843 RGD:2304239 NCBI chrNW_004955408:391,094...430,638
Ensembl chrNW_004955408:391,094...430,981 		JBrowse link
G Men1 menin 1 acts_upstream_of_or_within ISO (MGI:3037372|PMID:14688275) MGI PMID:14688275 MGI:3037372 NCBI chrNW_004955422:20,356,491...20,363,374
Ensembl chrNW_004955422:20,356,491...20,363,575 		JBrowse link
G Mtch2 mitochondrial carrier 2 acts_upstream_of_or_within ISO (MGI:5662300|PMID:26219591) MGI PMID:26219591 MGI:5662300 NCBI chrNW_004955422:672,301...690,989
Ensembl chrNW_004955422:672,301...690,989 		JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor involved_in ISO (PMID:19179467) UniProt PMID:19179467 NCBI chrNW_004955461:2,714,022...2,718,872
Ensembl chrNW_004955461:2,714,022...2,718,982 		JBrowse link
G Ndufa13 NADH:ubiquinone oxidoreductase subunit A13 involved_in ISO (PMID:17297443) ParkinsonsUK-UCL PMID:17297443 NCBI chrNW_004955524:2,426,604...2,433,682
Ensembl chrNW_004955524:2,426,604...2,433,679 		JBrowse link
G Nkx3-1 NK3 homeobox 1 involved_in ISO (PMID:20599703) UniProt PMID:20599703 NCBI chrNW_004955403:46,807,846...46,809,924
Ensembl chrNW_004955403:46,806,178...46,836,310 		JBrowse link
G Nlrp3 NLR family pyrin domain containing 3 involved_in ISO (PMID:15030775) HGNC-UCL PMID:15030775 NCBI chrNW_004955581:597,952...616,903
Ensembl chrNW_004955581:597,667...617,410 		JBrowse link
G Nod1 nucleotide binding oligomerization domain containing 1 acts_upstream_of_or_within ISO (PMID:10329646) MGI PMID:10329646 NCBI chrNW_004955410:31,681,191...31,725,173
Ensembl chrNW_004955410:31,681,077...31,725,173 		JBrowse link
G Nodal nodal growth differentiation factor involved_in ISO (PMID:15150278) BHF-UCL PMID:15150278 NCBI chrNW_004955437:20,828,448...20,835,486
Ensembl chrNW_004955437:20,828,448...20,835,628 		JBrowse link
G Pdcd5 programmed cell death 5 involved_in ISO (PMID:16374546) UniProt PMID:16374546 NCBI chrNW_004955468:5,365,137...5,372,888 JBrowse link
G Pdcd6 programmed cell death 6 involved_in ISO (PMID:16132846) UniProt PMID:16132846 NCBI chrNW_004955504:75,378...94,654
Ensembl chrNW_004955504:74,944...98,282 		JBrowse link
G Pmaip1 phorbol-12-myristate-13-acetate-induced protein 1 involved_in ISO (PMID:14699081) UniProt PMID:14699081 NCBI chrNW_004955402:44,005,517...44,010,722 JBrowse link
G Ppm1f protein phosphatase, Mg2+/Mn2+ dependent 1F involved_in ISO (PMID:11559703) UniProt PMID:11559703 RGD:8553939 NCBI chrNW_004955442:17,233,258...17,256,009
Ensembl chrNW_004955442:17,227,723...17,252,383 		JBrowse link
G Ppp2ca protein phosphatase 2 catalytic subunit alpha ISO RGD PMID:18322138 RGD:8693423 NCBI chrNW_004955408:5,435,117...5,460,361
Ensembl chrNW_004955408:5,433,268...5,460,361 		JBrowse link
G Rhoa ras homolog family member A ISO RGD PMID:17425560 RGD:1642961 NCBI chrNW_004955532:1,300,821...1,347,453
Ensembl chrNW_004955532:1,300,462...1,347,451 		JBrowse link
G Sirt1 sirtuin 1 involved_in ISO (PMID:19047049) UniProt PMID:19047049 NCBI chrNW_004955425:20,280,725...20,307,663
Ensembl chrNW_004955425:20,279,963...20,307,663 		JBrowse link
G Sox7 SRY-box transcription factor 7 involved_in ISO (PMID:19108950) UniProt PMID:19108950 NCBI chrNW_004955403:52,253,816...52,259,884
Ensembl chrNW_004955403:52,253,482...52,259,884 		JBrowse link
G Syk spleen associated tyrosine kinase involved_in ISO (PMID:22267217) ARUK-UCL PMID:22267217 NCBI chrNW_004955515:1,328,793...1,400,206
Ensembl chrNW_004955515:1,328,630...1,380,581 		JBrowse link
G Tnf tumor necrosis factor involved_in ISO (PMID:11577081) UniProt PMID:11577081 NCBI chrNW_004955437:117,267...119,899
Ensembl chrNW_004955437:117,206...120,700 		JBrowse link
G Tnfsf10 TNF superfamily member 10 involved_in ISO (PMID:21459798), (PMID:21525171), (PMID:22266862) UniProt PMID:21459798 PMID:21525171 PMID:22266862 NCBI chrNW_004955420:2,550,392...2,566,448
Ensembl chrNW_004955420:2,549,142...2,566,564 		JBrowse link
G Uaca uveal autoantigen with coiled-coil domains and ankyrin repeats acts_upstream_of_or_within ISO (MGI:3056865|PMID:15271982) MGI PMID:15271982 MGI:3056865 NCBI chrNW_004955450:6,122,271...6,195,345
Ensembl chrNW_004955450:6,122,439...6,197,177 		JBrowse link
G Wdr35 WD repeat domain 35 ISO RGD PMID:20193664 RGD:11553917 NCBI chrNW_004955469:2,484,972...2,546,562
Ensembl chrNW_004955469:2,482,353...2,546,578 		JBrowse link
G Wnt3a Wnt family member 3A acts_upstream_of_or_within ISO (MGI:3702339|PMID:17251350) MGI PMID:17251350 MGI:3702339 NCBI chrNW_004955581:351,375...382,541
Ensembl chrNW_004955581:350,889...382,541 		JBrowse link
positive regulation of cysteine-type endopeptidase activity involved in apoptotic signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fas Fas cell surface death receptor involved_in ISO (PMID:11096076) CAFA PMID:11096076 NCBI chrNW_004955425:3,961,671...3,987,513
Ensembl chrNW_004955425:3,961,013...3,987,455 		JBrowse link
G Gsn gelsolin involved_in ISO (PMID:22952982) UniProt PMID:22952982 NCBI chrNW_004955419:6,682,202...6,733,361
Ensembl chrNW_004955419:6,682,058...6,733,361 		JBrowse link
G Htra2 HtrA serine peptidase 2 involved_in ISO (PMID:11602612) ParkinsonsUK-UCL PMID:11602612 NCBI chrNW_004955424:11,255,756...11,259,170
Ensembl chrNW_004955424:11,255,756...11,259,170 		JBrowse link
G Lgals9 galectin 9 involved_in ISO (PMID:24465902) UniProt PMID:24465902 NCBI chrNW_004955481:5,234,125...5,249,564 JBrowse link
G Prr7 proline rich 7, synaptic involved_in ISO (PMID:21460222) UniProt PMID:21460222 NCBI chrNW_004955408:29,685,254...29,695,113
Ensembl chrNW_004955408:29,692,004...29,695,113 		JBrowse link
G St18 ST18 C2H2C-type zinc finger transcription factor involved_in ISO (PMID:18676404) UniProt PMID:18676404 NCBI chrNW_004955454:11,715,538...12,016,396
Ensembl chrNW_004955454:11,713,162...11,924,284 		JBrowse link
G Tfap4 transcription factor AP-4 acts_upstream_of_or_within ISO (MGI:4456943|PMID:15944155) MGI PMID:15944155 MGI:4456943 NCBI chrNW_004955442:13,160,467...13,174,288
Ensembl chrNW_004955442:13,160,450...13,175,057 		JBrowse link
positive regulation of cysteine-type endopeptidase activity involved in execution phase of apoptosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rps3 ribosomal protein S3 involved_in ISO (PMID:22510408) UniProt PMID:22510408 NCBI chrNW_004955414:16,436,899...16,442,325
Ensembl chrNW_004955414:16,436,899...16,443,073 		JBrowse link
G Tnf tumor necrosis factor ISO RGD PMID:12131680 RGD:14995454 NCBI chrNW_004955437:117,267...119,899
Ensembl chrNW_004955437:117,206...120,700 		JBrowse link
positive regulation of endopeptidase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akirin2 akirin 2 ISO MMP-9 RGD PMID:18460465 RGD:2306009 NCBI chrNW_004955411:14,600,106...14,619,374
Ensembl chrNW_004955411:14,600,106...14,619,069 		JBrowse link
G Aph1a aph-1 homolog A, gamma-secretase subunit involved_in ISO (PMID:12297508)
(MGI:6478051|PMID:12522139)
(PMID:12763021)		 ARUK-UCL PMID:12297508 PMID:12522139 PMID:12763021 MGI:6478051 NCBI chrNW_004955413:506,297...509,787
Ensembl chrNW_004955413:506,297...509,787 		JBrowse link
G Aph1b aph-1 homolog B, gamma-secretase subunit involved_in ISO (PMID:12297508)
(PMID:12763021)		 ARUK-UCL PMID:12297508 PMID:12763021 NCBI chrNW_004955450:12,000,682...12,022,183
Ensembl chrNW_004955450:12,000,424...12,022,071 		JBrowse link
G Ncstn nicastrin involved_in ISO (PMID:12763021)
(PMID:12297508)		 ARUK-UCL PMID:12297508 PMID:12763021 NCBI chrNW_004955468:12,111,078...12,126,404
Ensembl chrNW_004955468:12,111,078...12,127,033 		JBrowse link
G Prelid1 PRELI domain containing 1 involved_in ISO (PMID:18945965) UniProt PMID:18945965 NCBI chrNW_004955408:29,551,253...29,554,778
Ensembl chrNW_004955408:29,551,424...29,554,436 		JBrowse link
G Psenen presenilin enhancer, gamma-secretase subunit involved_in ISO (PMID:12522139), (PMID:12660785)
(MGI:6392999|PMID:12660785), (MGI:6478051|PMID:12522139)
(PMID:12763021)		 ARUK-UCL
UniProt		 PMID:12522139 PMID:12660785 PMID:12763021 MGI:6392999 MGI:6478051 NCBI chrNW_004955468:2,805,153...2,806,573
Ensembl chrNW_004955468:2,805,153...2,806,573 		JBrowse link
G Sfrp2 secreted frizzled related protein 2 acts_upstream_of_or_within ISO (MGI:3839034|PMID:19079247) MGI PMID:19079247 MGI:3839034 NCBI chrNW_004955471:8,103,937...8,112,596
Ensembl chrNW_004955471:8,103,783...8,112,321 		JBrowse link
G Vsir V-set immunoregulatory receptor involved_in ISO (PMID:20666777) UniProt PMID:20666777 NCBI chrNW_004955437:19,716,466...19,743,428 JBrowse link
positive regulation of ER-associated ubiquitin-dependent protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcap31 B cell receptor associated protein 31 involved_in ISO (PMID:18555783) ParkinsonsUK-UCL PMID:18555783 NCBI chrNW_004955580:429,223...459,168
Ensembl chrNW_004955580:428,644...459,168 		JBrowse link
G Cav1 caveolin 1 involved_in ISO (PMID:24089527) ParkinsonsUK-UCL PMID:24089527 NCBI chrNW_004955432:22,258,262...22,292,403
Ensembl chrNW_004955432:22,258,250...22,292,403 		JBrowse link
G Herpud1 homocysteine inducible ER protein with ubiquitin like domain 1 involved_in ISO (PMID:18307982)
(PMID:22045699)		 UniProt
ParkinsonsUK-UCL		 PMID:18307982 PMID:22045699 NCBI chrNW_004955433:14,609,275...14,621,774
Ensembl chrNW_004955433:14,608,375...14,621,839 		JBrowse link
G Sgta small glutamine rich tetratricopeptide repeat co-chaperone alpha involved_in ISO (PMID:23246001) ParkinsonsUK-UCL PMID:23246001 NCBI chrNW_004955495:5,025,038...5,051,810
Ensembl chrNW_004955495:5,031,229...5,052,389 		JBrowse link
G Ubqln1 ubiquilin 1 involved_in ISO (PMID:18307982) UniProt PMID:18307982 NCBI chrNW_004955432:3,575,034...3,617,029
Ensembl chrNW_004955432:3,575,272...3,616,691 		JBrowse link
G Ubqln2 ubiquilin 2 involved_in ISO (PMID:18307982) UniProt PMID:18307982 NCBI chrNW_004955475:3,260,209...3,263,586
Ensembl chrNW_004955475:3,260,503...3,262,380 		JBrowse link
positive regulation of ERAD pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atxn3 ataxin 3 involved_in ISO (PMID:17000876) ParkinsonsUK-UCL PMID:17000876 NCBI chrNW_004955438:14,405,415...14,443,457
Ensembl chrNW_004955438:14,405,643...14,440,009 		JBrowse link
G Bag6 BAG cochaperone 6 involved_in ISO (PMID:24424410) ParkinsonsUK-UCL PMID:24424410 NCBI chrNW_004955437:176,848...188,243
Ensembl chrNW_004955437:176,797...188,003 		JBrowse link
G Rnf185 ring finger protein 185 involved_in ISO (PMID:27485036) UniProt PMID:27485036 NCBI chrNW_004955455:5,351,530...5,394,615
Ensembl chrNW_004955455:5,351,488...5,395,026 		JBrowse link
G Rnft1 ring finger protein, transmembrane 1 involved_in ISO (PMID:27485036) UniProt PMID:27485036 NCBI chrNW_004955451:3,165,316...3,178,991
Ensembl chrNW_004955451:3,164,845...3,178,991 		JBrowse link
G Tmem259 transmembrane protein 259 involved_in ISO (MGI:5648655|PMID:25977983) UniProt PMID:25977983 MGI:5648655 NCBI chrNW_004955495:6,856,609...6,859,948
Ensembl chrNW_004955495:6,852,278...6,859,351 		JBrowse link
G Tmem67 transmembrane protein 67 ISO RGD PMID:19815549 RGD:8554391 NCBI chrNW_004955417:10,097,488...10,137,959
Ensembl chrNW_004955417:10,097,472...10,138,644 		JBrowse link
G Usp13 ubiquitin specific peptidase 13 involved_in ISO (PMID:24424410) ParkinsonsUK-UCL PMID:24424410 NCBI chrNW_004955420:8,835,858...8,919,837
Ensembl chrNW_004955420:8,835,549...8,919,933 		JBrowse link
G Wfs1 wolframin ER transmembrane glycoprotein involved_in ISO (MGI:4999711|PMID:19911006) MGI PMID:19911006 MGI:4999711 NCBI chrNW_004955514:3,902,508...3,924,281
Ensembl chrNW_004955514:3,902,454...3,924,610 		JBrowse link
positive regulation of histone deubiquitination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sart3 spliceosome associated factor 3, U4/U6 recycling protein involved_in ISO (PMID:24526689) UniProt PMID:24526689 NCBI chrNW_004955455:9,802,260...9,833,326
Ensembl chrNW_004955455:9,802,260...9,832,957 		JBrowse link
positive regulation of Lys63-specific deubiquitinase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Vcp valosin containing protein involved_in ISO (PMID:22970133) ParkinsonsUK-UCL PMID:22970133 NCBI chrNW_004955472:1,111,649...1,124,076
Ensembl chrNW_004955472:1,107,164...1,124,076 		JBrowse link
positive regulation of membrane protein ectodomain proteolysis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adam8 ADAM metallopeptidase domain 8 involved_in ISO (PMID:15220135), (PMID:17548643)
(MGI:3040545|PMID:14761956)		 BHF-UCL PMID:14761956 PMID:15220135 PMID:17548643 MGI:3040545 NCBI chrNW_004955477:10,894,288...10,906,961
Ensembl chrNW_004955477:10,895,446...10,907,215 		JBrowse link
G Adam9 ADAM metallopeptidase domain 9 involved_in ISO (MGI:1326990|PMID:9857183) BHF-UCL PMID:9857183 MGI:1326990 NCBI chrNW_004955463:14,545,425...14,646,498
Ensembl chrNW_004955463:14,545,589...14,645,419 		JBrowse link
G Adra2a adrenoceptor alpha 2A involved_in ISO (PMID:17655843) BHF-UCL PMID:17655843 NCBI chrNW_004955485:384,405...387,332
Ensembl chrNW_004955485:385,800...387,240 		JBrowse link
G Apoe apolipoprotein E involved_in ISO (PMID:15950758)
(PMID:25015123)		 BHF-UCL
ARUK-UCL		 PMID:15950758 PMID:25015123 NCBI chrNW_004955555:1,998,170...2,002,003
Ensembl chrNW_004955555:1,999,711...2,001,888 		JBrowse link
G App amyloid beta precursor protein involved_in ISO (PMID:25015123) ARUK-UCL PMID:25015123 NCBI chrNW_004955407:25,725,259...25,973,582
Ensembl chrNW_004955407:25,722,849...25,974,268 		JBrowse link
G Gpld1 glycosylphosphatidylinositol specific phospholipase D1 involved_in ISO (PMID:17720976)
(MGI:5447609|PMID:17720976)		 UniProt PMID:17720976 MGI:5447609 NCBI chrNW_004955483:2,501,751...2,552,855
Ensembl chrNW_004955483:2,502,345...2,552,689 		JBrowse link
G Ifng interferon gamma involved_in ISO (PMID:18373975) BHF-UCL PMID:18373975 NCBI chrNW_004955458:14,643,333...14,648,020
Ensembl chrNW_004955458:14,643,313...14,648,045 		JBrowse link
G Il1b interleukin 1 beta involved_in ISO (PMID:18373975) BHF-UCL PMID:18373975 NCBI chrNW_004955470:1,486,936...1,491,888
Ensembl chrNW_004955470:1,486,967...1,491,947 		JBrowse link
G Nrdc nardilysin convertase involved_in ISO (PMID:18355445)
(MGI:4414693|PMID:19935654)		 BHF-UCL
UniProt		 PMID:18355445 PMID:19935654 MGI:4414693 NCBI chrNW_004955464:7,222,948...7,298,234
Ensembl chrNW_004955464:7,222,948...7,298,234 		JBrowse link
G Pacsin3 protein kinase C and casein kinase substrate in neurons 3 involved_in ISO (PMID:15280379) BHF-UCL PMID:15280379 NCBI chrNW_004955422:989,605...995,140 JBrowse link
G Rgma repulsive guidance molecule BMP co-receptor a acts_upstream_of_or_within ISO (MGI:5702499|PMID:26651291) MGI PMID:26651291 MGI:5702499 NCBI chrNW_004955416:21,221,023...21,261,831
Ensembl chrNW_004955416:21,221,023...21,261,831 		JBrowse link
G Sh3d19 SH3 domain containing 19 involved_in ISO (PMID:15280379) BHF-UCL PMID:15280379 NCBI chrNW_004955471:5,724,303...5,810,868
Ensembl chrNW_004955471:5,726,267...5,770,384 		JBrowse link
G Snx33 sorting nexin 33 involved_in ISO (PMID:18353773), (PMID:18419754) UniProt PMID:18353773 PMID:18419754 NCBI chrNW_004955450:2,669,993...2,682,503
Ensembl chrNW_004955450:2,669,993...2,682,503 		JBrowse link
G Snx9 sorting nexin 9 involved_in ISO (PMID:18353773) UniProt PMID:18353773 NCBI chrNW_004955439:4,422,385...4,503,408
Ensembl chrNW_004955439:4,421,297...4,503,393 		JBrowse link
G Tnf tumor necrosis factor involved_in ISO (PMID:18373975) BHF-UCL PMID:18373975 NCBI chrNW_004955437:117,267...119,899
Ensembl chrNW_004955437:117,206...120,700 		JBrowse link
G Tnfrsf1b TNF receptor superfamily member 1B involved_in ISO (PMID:22480688) BHF-UCL PMID:22480688 NCBI chrNW_004955486:1,790,531...1,817,986
Ensembl chrNW_004955486:1,792,115...1,818,362 		JBrowse link
positive regulation of metalloendopeptidase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arhgef2 Rho/Rac guanine nucleotide exchange factor 2 involved_in ISO (PMID:23389627) AgBase PMID:23389627 NCBI chrNW_004955545:2,149,107...2,192,986
Ensembl chrNW_004955545:2,149,107...2,197,153 		JBrowse link
G Mbp myelin basic protein involved_in ISO (PMID:22524708) CAFA PMID:22524708 NCBI chrNW_004955402:60,324,060...60,448,926
Ensembl chrNW_004955402:60,323,950...60,441,406 		JBrowse link
G Stat3 signal transducer and activator of transcription 3 involved_in ISO (PMID:23820254) BHF-UCL PMID:23820254 NCBI chrNW_004955451:16,320,326...16,348,505
Ensembl chrNW_004955451:16,319,904...16,357,687 		JBrowse link
positive regulation of metallopeptidase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Antxr1 ANTXR cell adhesion molecule 1 acts_upstream_of_or_within ISO (MGI:5662198|PMID:25572963) MGI PMID:25572963 MGI:5662198 NCBI chrNW_004955424:15,820,734...16,034,278
Ensembl chrNW_004955424:15,824,435...16,033,946 		JBrowse link
G Cldn4 claudin 4 involved_in ISO (PMID:16103090) ARUK-UCL PMID:16103090 NCBI chrNW_004955456:13,961,743...13,965,498
Ensembl chrNW_004955456:13,962,497...13,963,126 		JBrowse link
G Ddrgk1 DDRGK domain containing 1 involved_in ISO (PMID:23675531) ParkinsonsUK-UCL PMID:23675531 NCBI chrNW_004955415:14,085,404...14,098,220
Ensembl chrNW_004955415:14,085,404...14,098,856 		JBrowse link
positive regulation of peptidase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctsh cathepsin H involved_in ISO (PMID:20435891)
(MGI:4838939|PMID:20435891)		 UniProt PMID:20435891 MGI:4838939 NCBI chrNW_004955533:39,237...54,881
Ensembl chrNW_004955533:39,284...54,837 		JBrowse link
G Prss22 serine protease 22 involved_in ISO (PMID:15701722) UniProt PMID:15701722 NCBI chrNW_004955442:14,618,859...14,623,508
Ensembl chrNW_004955442:14,618,859...14,623,508 		JBrowse link
G Rcn3 reticulocalbin 3 involved_in ISO (PMID:28939891) UniProt PMID:28939891 NCBI chrNW_004955559:1,309,621...1,319,925
Ensembl chrNW_004955559:1,309,621...1,319,925 		JBrowse link
positive regulation of plasminogen activation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Anxa2 annexin A2 involved_in ISO (PMID:9836589) ComplexPortal PMID:9836589 NCBI chrNW_004955450:14,545,586...14,574,161
Ensembl chrNW_004955450:14,512,381...14,574,696 		JBrowse link
G Clec3b C-type lectin domain family 3 member B involved_in ISO (MGI:5447625|PMID:12694198) UniProt PMID:12694198 MGI:5447625 NCBI chrNW_004955420:26,665,472...26,669,474 JBrowse link
G Eno1 enolase 1 involved_in ISO (PMID:12666133) CAFA PMID:12666133 NCBI chrNW_004955486:4,275,371...4,287,152
Ensembl chrNW_004955486:4,274,238...4,289,809 		JBrowse link
G F12 coagulation factor XII involved_in ISO (PMID:89876) BHF-UCL PMID:89876 NCBI chrNW_004955408:29,644,279...29,665,161
Ensembl chrNW_004955408:29,642,096...29,650,950 		JBrowse link
G Hpn hepsin involved_in ISO (PMID:16908524) UniProt PMID:16908524 NCBI chrNW_004955468:4,384,630...4,399,881
Ensembl chrNW_004955468:4,384,630...4,400,379 		JBrowse link
G Meltf melanotransferrin involved_in ISO (PMID:16713448) UniProt PMID:16713448 NCBI chrNW_004955420:13,036,767...13,055,477
Ensembl chrNW_004955420:13,035,309...13,055,548 		JBrowse link
G Plgrkt plasminogen receptor with a C-terminal lysine acts_upstream_of_or_within ISO (MGI:4437195|PMID:19897580) MGI PMID:19897580 MGI:4437195 NCBI chrNW_004955434:9,424,793...9,468,055
Ensembl chrNW_004955434:9,424,397...9,468,159 		JBrowse link
G Ruvbl1 RuvB like AAA ATPase 1 ISO RGD PMID:11027681 RGD:67924 NCBI chrNW_004955429:15,598,465...15,632,290
Ensembl chrNW_004955429:15,598,465...15,633,713 		JBrowse link
G S100a10 S100 calcium binding protein A10 involved_in ISO (PMID:9836589) ComplexPortal PMID:9836589 NCBI chrNW_004955589:435,798...446,361 JBrowse link
positive regulation of proteasomal protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bag2 BAG cochaperone 2 involved_in ISO (MGI:6148635|PMID:19228967) ARUK-UCL PMID:19228967 MGI:6148635 NCBI chrNW_004955502:2,984,233...2,994,457 JBrowse link
G Dab2ip DAB2 interacting protein involved_in ISO (PMID:20080667) UniProt PMID:20080667 NCBI chrNW_004955419:6,229,437...6,416,619
Ensembl chrNW_004955419:6,228,591...6,416,402 		JBrowse link
G Ddrgk1 DDRGK domain containing 1 involved_in ISO (PMID:23675531) UniProt PMID:23675531 NCBI chrNW_004955415:14,085,404...14,098,220
Ensembl chrNW_004955415:14,085,404...14,098,856 		JBrowse link
G Ecscr endothelial cell surface expressed chemotaxis and apoptosis regulator acts_upstream_of_or_within ISO (PMID:19416853) MGI PMID:19416853 NCBI chrNW_004955418:1,108,805...1,116,338
Ensembl chrNW_004955418:1,109,092...1,115,997 		JBrowse link
G Fbxw7 F-box and WD repeat domain containing 7 involved_in ISO (PMID:23858059)
(MGI:5543313|PMID:23858059)		 ParkinsonsUK-UCL PMID:23858059 MGI:5543313 NCBI chrNW_004955471:6,852,459...7,026,590
Ensembl chrNW_004955471:6,848,101...6,955,881 		JBrowse link
G Fmr1 Fragile X messenger ribonucleoprotein 1 involved_in ISO (MGI:5770038|PMID:24709664) UniProt PMID:24709664 MGI:5770038 NCBI chrNW_004955498:566,741...594,837
Ensembl chrNW_004955498:566,688...595,360 		JBrowse link
G Kcne2 potassium voltage-gated channel subfamily E regulatory subunit 2 involved_in ISO (PMID:22180649) BHF-UCL PMID:22180649 NCBI chrNW_004955407:33,734,969...33,736,609
Ensembl chrNW_004955407:33,735,148...33,735,513 		JBrowse link
G Nupr1 nuclear protein 1, transcriptional regulator involved_in ISO (PMID:16300740) UniProt PMID:16300740 NCBI chrNW_004955493:6,746,380...6,747,763
Ensembl chrNW_004955493:6,746,380...6,747,763 		JBrowse link
G Osbpl7 oxysterol binding protein like 7 involved_in ISO (PMID:21669198) BHF-UCL PMID:21669198 NCBI chrNW_004955451:13,289,938...13,301,243
Ensembl chrNW_004955451:13,291,577...13,300,322 		JBrowse link
G Prkn parkin RBR E3 ubiquitin protein ligase involved_in ISO (PMID:23858059) ParkinsonsUK-UCL PMID:23858059 NCBI chrNW_004955439:18,664,230...19,953,358
Ensembl chrNW_004955439:18,664,379...19,951,152 		JBrowse link
G Rnf40 ring finger protein 40 ISO RGD PMID:12121982 RGD:633892 NCBI chrNW_004955493:7,627,189...7,640,711
Ensembl chrNW_004955493:7,627,189...7,640,711 		JBrowse link
G Tmtc3 transmembrane O-mannosyltransferase targeting cadherins 3 involved_in ISO (PMID:21603654) UniProt PMID:21603654 NCBI chrNW_004955405:25,607,134...25,646,050
Ensembl chrNW_004955405:25,606,414...25,646,050 		JBrowse link
G Trem2 triggering receptor expressed on myeloid cells 2 involved_in ISO (MGI:6150565|PMID:29518356) ARUK-UCL PMID:29518356 MGI:6150565 NCBI chrNW_004955437:7,780,886...7,785,597
Ensembl chrNW_004955437:7,780,679...7,785,697 		JBrowse link
G Xbp1 X-box binding protein 1 acts_upstream_of_or_within ISO (MGI:4946566|PMID:21317886) MGI PMID:21317886 MGI:4946566 NCBI chrNW_004955455:3,037,885...3,041,827 JBrowse link
positive regulation of proteasomal ubiquitin-dependent protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akt1 AKT serine/threonine kinase 1 acts_upstream_of_or_within
involved_in		 ISO (MGI:3589701|PMID:15937334)
(PMID:23512198)		 MGI
UniProt		 PMID:15937334 PMID:23512198 MGI:3589701 NCBI chrNW_004955538:3,208,711...3,224,386
Ensembl chrNW_004955538:3,208,710...3,229,904 		JBrowse link
G Atg7 autophagy related 7 acts_upstream_of_or_within ISO (MGI:5465208|PMID:23152632) MGI PMID:23152632 MGI:5465208 NCBI chrNW_004955429:14,076,976...14,301,034
Ensembl chrNW_004955429:14,076,960...14,304,236 		JBrowse link
G Aurka aurora kinase A acts_upstream_of_or_within ISO (MGI:3697244|PMID:17060449) MGI PMID:17060449 MGI:3697244 NCBI chrNW_004955445:2,831,073...2,853,151
Ensembl chrNW_004955445:2,831,157...2,853,357 		JBrowse link
G Axin1 axin 1 acts_upstream_of_or_within ISO (MGI:3628833|PMID:16601693) MGI PMID:16601693 MGI:3628833 NCBI chrNW_004955442:16,845,728...16,898,301
Ensembl chrNW_004955442:16,843,152...16,898,430 		JBrowse link
G Bag2 BAG cochaperone 2 NOT|involved_in ISO (MGI:6148635|PMID:19228967) ARUK-UCL PMID:19228967 MGI:6148635 NCBI chrNW_004955502:2,984,233...2,994,457 JBrowse link
G Bbs7 Bardet-Biedl syndrome 7 acts_upstream_of_or_within ISO (PMID:22302990) MGI PMID:22302990 NCBI chrNW_004955428:18,682,072...18,724,560
Ensembl chrNW_004955428:18,681,856...18,724,560 		JBrowse link
G Cbfa2t3 CBFA2/RUNX1 partner transcriptional co-repressor 3 involved_in ISO (PMID:25974097) UniProt PMID:25974097 NCBI chrNW_004955541:2,724,369...2,777,540
Ensembl chrNW_004955541:2,724,312...2,777,592 		JBrowse link
G Chfr checkpoint with forkhead and ring finger domains acts_upstream_of_or_within ISO (MGI:5310666|PMID:22285184) MGI PMID:22285184 MGI:5310666 NCBI chrNW_004955482:233,485...267,064
Ensembl chrNW_004955482:233,486...267,064 		JBrowse link
G Clu clusterin involved_in ISO (PMID:20068069) UniProt PMID:20068069 NCBI chrNW_004955403:50,160,598...50,175,876
Ensembl chrNW_004955403:50,160,598...50,175,876 		JBrowse link
G Cop1 COP1 E3 ubiquitin ligase involved_in ISO (PMID:19805145) UniProt PMID:19805145 NCBI chrNW_004955406:15,662,546...15,859,306
Ensembl chrNW_004955406:15,662,546...15,859,306 		JBrowse link
G Csnk1a1 casein kinase 1 alpha 1 involved_in ISO (PMID:11955436)
(PMID:19364825)		 ParkinsonsUK-UCL
FlyBase		 PMID:11955436 PMID:19364825 NCBI chrNW_004955415:4,921,356...4,966,705
Ensembl chrNW_004955415:4,921,852...4,966,705 		JBrowse link
G Csnk1d casein kinase 1 delta involved_in ISO (MGI:3849793|PMID:19414593) UniProt PMID:19414593 MGI:3849793 NCBI chrNW_004955506:904,659...936,293
Ensembl chrNW_004955506:904,660...935,330 		JBrowse link
G Csnk1e casein kinase 1 epsilon involved_in ISO (MGI:3849793|PMID:19414593) UniProt PMID:19414593 MGI:3849793 NCBI chrNW_004955413:24,560,889...24,591,669
Ensembl chrNW_004955413:24,560,900...24,591,669 		JBrowse link
G Dab2 DAB adaptor protein 2 involved_in ISO (PMID:12805222) BHF-UCL PMID:12805222 NCBI chrNW_004955426:23,852,752...23,883,030 JBrowse link
G Ddrgk1 DDRGK domain containing 1 involved_in ISO (PMID:23675531) ParkinsonsUK-UCL PMID:23675531 NCBI chrNW_004955415:14,085,404...14,098,220
Ensembl chrNW_004955415:14,085,404...14,098,856 		JBrowse link
G Det1 DET1 partner of COP1 E3 ubiquitin ligase involved_in ISO (PMID:14739464) UniProt PMID:14739464 NCBI chrNW_004955416:16,393,199...16,408,144
Ensembl chrNW_004955416:16,393,156...16,408,613 		JBrowse link
G Dnajb2 DnaJ heat shock protein family (Hsp40) member B2 involved_in ISO (PMID:15936278) BHF-UCL PMID:15936278 NCBI chrNW_004955453:14,147,286...14,154,396
Ensembl chrNW_004955453:14,148,070...14,154,670 		JBrowse link
G Dvl1 dishevelled segment polarity protein 1 involved_in ISO (PMID:20177058) BHF-UCL PMID:20177058 NCBI chrNW_004955486:9,464,390...9,469,984
Ensembl chrNW_004955486:9,464,313...9,469,984 		JBrowse link
G Fbxo22 F-box protein 22 acts_upstream_of_or_within ISO (MGI:3840749|PMID:19319192) MGI PMID:19319192 MGI:3840749 NCBI chrNW_004955450:1,152,383...1,171,257
Ensembl chrNW_004955450:1,152,383...1,171,250 		JBrowse link
G Gabarap GABA type A receptor-associated protein involved_in ISO (PMID:25684205) UniProt PMID:25684205 NCBI chrNW_004955467:9,667,938...9,670,067
Ensembl chrNW_004955467:9,667,941...9,670,067 		JBrowse link
G Gba1 glucosylceramidase beta 1 involved_in ISO (MGI:5501380|PMID:23707074) ParkinsonsUK-UCL PMID:23707074 MGI:5501380 NCBI chrNW_004955545:1,682,097...1,689,373
Ensembl chrNW_004955545:1,682,097...1,689,376 		JBrowse link
G Gclc glutamate-cysteine ligase catalytic subunit acts_upstream_of_or_within ISO (MGI:3695876|PMID:17189825) MGI PMID:17189825 MGI:3695876 NCBI chrNW_004955411:2,593,523...2,617,553
Ensembl chrNW_004955411:2,593,541...2,616,539 		JBrowse link
G Gsk3a glycogen synthase kinase 3 alpha involved_in ISO (PMID:25897075) ARUK-UCL PMID:25897075 NCBI chrNW_004955555:668,641...676,351
Ensembl chrNW_004955555:667,973...676,351 		JBrowse link
G Gsk3b glycogen synthase kinase 3 beta involved_in
acts_upstream_of_or_within		 ISO (PMID:19364825)
(PMID:19364825), (PMID:22660580)
(MGI:5437589|PMID:22660580)
(PMID:25897075)		 FlyBase
UniProt
MGI
ARUK-UCL		 PMID:19364825 PMID:22660580 PMID:25897075 MGI:5437589 NCBI chrNW_004955427:19,489,972...19,671,137
Ensembl chrNW_004955427:19,495,422...19,671,137 		JBrowse link
G Hspbp1 HSPA (Hsp70) binding protein 1 involved_in ISO (PMID:16831871) BHF-UCL PMID:16831871 NCBI chrNW_004955567:948,040...960,621
Ensembl chrNW_004955567:947,798...960,678 		JBrowse link
G Il33 interleukin 33 acts_upstream_of_or_within ISO (MGI:5437589|PMID:22660580) MGI PMID:22660580 MGI:5437589 NCBI chrNW_004955434:10,145,449...10,187,595
Ensembl chrNW_004955434:10,171,812...10,188,948 		JBrowse link
G Klhl40 kelch like family member 40 involved_in ISO (MGI:5700633|PMID:25940086) UniProt PMID:25940086 MGI:5700633 NCBI chrNW_004955420:28,117,553...28,122,391
Ensembl chrNW_004955420:28,117,898...28,122,270 		JBrowse link
G Lrrk2 leucine rich repeat kinase 2 involved_in ISO (MGI:4454597|PMID:20457918) BHF-UCL PMID:20457918 MGI:4454597 NCBI chrNW_004955505:84,324...216,923
Ensembl chrNW_004955505:81,796...216,923 		JBrowse link
G Mdm2 MDM2 proto-oncogene involved_in ISO (PMID:11278372) BHF-UCL PMID:11278372 NCBI chrNW_004955458:15,264,028...15,287,290
Ensembl chrNW_004955458:15,263,739...15,286,808 		JBrowse link
G Nkd2 NKD inhibitor of WNT signaling pathway 2 involved_in ISO (PMID:20177058) BHF-UCL PMID:20177058 NCBI chrNW_004955504:507,253...527,275
Ensembl chrNW_004955504:507,388...526,407 		JBrowse link
G Nop53 NOP53 ribosome biogenesis factor involved_in ISO (PMID:25818168), (PMID:27323397)
(MGI:5897550|PMID:21804542)		 UniProt PMID:21804542 PMID:25818168 PMID:27323397 MGI:5897550 NCBI chrNW_004955574:1,505,997...1,514,680
Ensembl chrNW_004955574:1,506,022...1,517,130 		JBrowse link
G Nub1 negative regulator of ubiquitin like proteins 1 involved_in ISO (PMID:16707496) UniProt PMID:16707496 NCBI chrNW_004955491:5,709,791...5,737,620
Ensembl chrNW_004955491:5,709,791...5,739,079 		JBrowse link
G Pabir1 PP2A Aalpha (PPP2R1A) and B55A (PPP2R2A) interacting phosphatase regulator 1 involved_in ISO (PMID:27588481) UniProt PMID:27588481 NCBI chrNW_004955434:4,250,105...4,251,508 JBrowse link
G Pias1 protein inhibitor of activated STAT 1 involved_in ISO (MGI:5487503|PMID:22406621) UniProt PMID:22406621 MGI:5487503 NCBI chrNW_004955450:7,896,741...7,991,045
Ensembl chrNW_004955450:7,896,741...7,991,027 		JBrowse link
G Plk1 polo like kinase 1 involved_in ISO (PMID:19473992) UniProt PMID:19473992 NCBI chrNW_004955493:2,206,353...2,217,231
Ensembl chrNW_004955493:2,206,353...2,217,231 		JBrowse link
G Plk2 polo like kinase 2 ISO RGD PMID:18723513 RGD:7241135 NCBI chrNW_004955446:9,671,090...9,676,956
Ensembl chrNW_004955446:9,671,090...9,677,188 		JBrowse link
G Prickle1 prickle planar cell polarity protein 1 involved_in ISO (PMID:17030191) BHF-UCL PMID:17030191 NCBI chrNW_004955500:1,897,899...1,990,791
Ensembl chrNW_004955500:1,897,912...1,990,875 		JBrowse link
G Prkn parkin RBR E3 ubiquitin protein ligase involved_in ISO (MGI:5543313|PMID:23858059) ParkinsonsUK-UCL PMID:23858059 MGI:5543313 NCBI chrNW_004955439:18,664,230...19,953,358
Ensembl chrNW_004955439:18,664,379...19,951,152 		JBrowse link
G Psen1 presenilin 1 involved_in ISO (MGI:4887523|PMID:20208556) BHF-UCL PMID:20208556 MGI:4887523 NCBI chrNW_004955523:2,128,529...2,210,737
Ensembl chrNW_004955523:2,128,529...2,210,737 		JBrowse link
G Psen2 presenilin 2 involved_in ISO (MGI:4887523|PMID:20208556) BHF-UCL PMID:20208556 MGI:4887523 NCBI chrNW_004955406:5,727,367...5,748,798
Ensembl chrNW_004955406:5,727,367...5,752,234 		JBrowse link
G Psmd10 proteasome 26S subunit, non-ATPase 10 involved_in ISO (PMID:16023600) UniProt PMID:16023600 NCBI chrNW_004955490:7,825,202...7,832,347
Ensembl chrNW_004955490:7,825,251...7,833,772 		JBrowse link
G Rack1 receptor for activated C kinase 1 involved_in ISO (PMID:19785988) UniProt PMID:19785988 NCBI chrNW_004955530:78,488...83,297
Ensembl chrNW_004955530:78,426...83,297 		JBrowse link
G Rad23a RAD23 homolog A, nucleotide excision repair protein involved_in ISO (PMID:26296656) CAFA PMID:26296656 NCBI chrNW_004955415:31,991,478...31,997,277
Ensembl chrNW_004955415:31,991,479...32,000,250 		JBrowse link
G Rbx1 ring-box 1 involved_in ISO (PMID:14739464) UniProt PMID:14739464 NCBI chrNW_004955413:26,579,759...26,592,980
Ensembl chrNW_004955413:26,579,759...26,592,980 		JBrowse link
G Rchy1 ring finger and CHY zinc finger domain containing 1 involved_in ISO (PMID:19483087) UniProt PMID:19483087 NCBI chrNW_004955474:1,463,817...1,475,677
Ensembl chrNW_004955474:1,463,817...1,475,690 		JBrowse link
G Rnf180 ring finger protein 180 acts_upstream_of_or_within ISO (MGI:3819024|PMID:18363970), (MGI:5505713|PMID:23926250) MGI PMID:18363970 PMID:23926250 MGI:3819024 MGI:5505713 NCBI chrNW_004955446:4,544,128...4,733,295
Ensembl chrNW_004955446:4,543,974...4,733,569 		JBrowse link
G Sh3rf2 SH3 domain containing ring finger 2 involved_in ISO (PMID:22128169) UniProt PMID:22128169 RGD:13673844 NCBI chrNW_004955415:8,024,984...8,148,970
Ensembl chrNW_004955415:8,042,380...8,147,564 		JBrowse link
G Sirt2 sirtuin 2 involved_in ISO (MGI:5574427|PMID:24681946) UniProt PMID:24681946 MGI:5574427 NCBI chrNW_004955468:626,365...644,441
Ensembl chrNW_004955468:626,365...644,441 		JBrowse link
G Smad7 SMAD family member 7 involved_in ISO (PMID:11278251) BHF-UCL PMID:11278251 NCBI chrNW_004955402:34,028,184...34,058,949
Ensembl chrNW_004955402:34,028,063...34,058,291 		JBrowse link
G Socs5 suppressor of cytokine signaling 5 involved_in ISO (PMID:15590694) UniProt PMID:15590694 NCBI chrNW_004955441:13,593,342...13,657,389
Ensembl chrNW_004955441:13,593,342...13,657,389 		JBrowse link
G Stub1 STIP1 homology and U-box containing protein 1 involved_in ISO (PMID:11146632) HGNC-UCL PMID:11146632 NCBI chrNW_004955442:16,521,130...16,523,733
Ensembl chrNW_004955442:16,521,130...16,523,468 		JBrowse link
G Sumo1 small ubiquitin like modifier 1 involved_in ISO (PMID:18408734) UniProt PMID:18408734 NCBI chrNW_004955457:12,538,974...12,565,803
Ensembl chrNW_004955457:12,538,480...12,565,803 		JBrowse link
G Sumo2 small ubiquitin like modifier 2 involved_in ISO (PMID:18408734) UniProt PMID:18408734 NCBI chrNW_004955553:2,045,277...2,066,023
Ensembl chrNW_004955553:2,045,415...2,065,863 		JBrowse link
G Taf1 TATA-box binding protein associated factor 1 involved_in ISO (PMID:15053879) BHF-UCL PMID:15053879 NCBI chrNW_004955475:10,930,175...11,006,876
Ensembl chrNW_004955475:10,930,192...11,005,724 		JBrowse link
G Trib1 tribbles pseudokinase 1 involved_in ISO (MGI:4457446|PMID:20410507) BHF-UCL PMID:20410507 MGI:4457446 NCBI chrNW_004955461:494,003...501,928
Ensembl chrNW_004955461:494,003...501,990 		JBrowse link
G Trib2 tribbles pseudokinase 2 involved_in ISO (MGI:4457446|PMID:20410507) BHF-UCL PMID:20410507 MGI:4457446 NCBI chrNW_004955487:6,889,571...6,915,068
Ensembl chrNW_004955487:6,890,246...6,915,135 		JBrowse link
G Ube2v2 ubiquitin conjugating enzyme E2 V2 ISO RGD PMID:12750002 RGD:1299567 NCBI chrNW_004955454:7,951,876...7,998,686
Ensembl chrNW_004955454:7,951,876...7,998,686 		JBrowse link
G Usp5 ubiquitin specific peptidase 5 involved_in ISO (PMID:19098288) UniProt PMID:19098288 NCBI chrNW_004955413:4,451,530...4,466,832
Ensembl chrNW_004955413:4,451,622...4,466,832 		JBrowse link
G Vcp valosin containing protein involved_in ISO (PMID:9452483) BHF-UCL PMID:9452483 NCBI chrNW_004955472:1,111,649...1,124,076
Ensembl chrNW_004955472:1,107,164...1,124,076 		JBrowse link
G Zer1 zyg-11 related cell cycle regulator involved_in ISO (PMID:31273098) UniProt PMID:31273098 NCBI chrNW_004955570:1,138,477...1,153,246
Ensembl chrNW_004955570:1,138,477...1,152,198 		JBrowse link
G Zfand2a zinc finger AN1-type containing 2A acts_upstream_of_or_within ISO (MGI:3663213|PMID:16973439) MGI PMID:16973439 MGI:3663213 NCBI chrNW_004955460:8,881,981...8,892,404
Ensembl chrNW_004955460:8,881,981...8,892,404 		JBrowse link
G Zyg11b zyg-11 family member B, cell cycle regulator involved_in ISO (PMID:31273098) UniProt PMID:31273098 NCBI chrNW_004955464:6,354,510...6,404,668
Ensembl chrNW_004955464:6,354,510...6,405,041 		JBrowse link
positive regulation of proteasomal ubiquitin-dependent protein catabolic process involved in cellular response to hypoxia term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Plk3 polo like kinase 3 involved_in ISO (PMID:20889502) UniProt PMID:20889502 NCBI chrNW_004955464:13,419,562...13,424,104
Ensembl chrNW_004955464:13,419,562...13,424,104 		JBrowse link
G Sirt2 sirtuin 2 involved_in ISO (PMID:24681946) UniProt PMID:24681946 NCBI chrNW_004955468:626,365...644,441
Ensembl chrNW_004955468:626,365...644,441 		JBrowse link
positive regulation of protein deubiquitination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tank TRAF family member associated NFKB activator involved_in ISO (PMID:25861989) UniProt PMID:25861989 NCBI chrNW_004955449:12,470,203...12,561,364
Ensembl chrNW_004955449:12,470,085...12,561,370 		JBrowse link
G Tnip1 TNFAIP3 interacting protein 1 involved_in ISO (PMID:16684768) UniProt PMID:16684768 NCBI chrNW_004955408:2,575,324...2,621,845
Ensembl chrNW_004955408:2,594,756...2,621,304 		JBrowse link
G Wdr48 WD repeat domain 48 involved_in ISO (PMID:31253762) UniProt PMID:31253762 NCBI chrNW_004955427:24,873,616...24,917,691
Ensembl chrNW_004955427:24,873,616...24,917,691 		JBrowse link
G Zc3h12a zinc finger CCCH-type containing 12A involved_in ISO (PMID:25861989) UniProt PMID:25861989 NCBI chrNW_004955452:15,306,398...15,314,959
Ensembl chrNW_004955452:15,305,775...15,314,959 		JBrowse link
positive regulation of protein K63-linked deubiquitination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nop53 NOP53 ribosome biogenesis factor involved_in ISO (PMID:27824081) UniProt PMID:27824081 NCBI chrNW_004955574:1,505,997...1,514,680
Ensembl chrNW_004955574:1,506,022...1,517,130 		JBrowse link
G Vcp valosin containing protein involved_in ISO (PMID:22970133) ParkinsonsUK-UCL PMID:22970133 NCBI chrNW_004955472:1,111,649...1,124,076
Ensembl chrNW_004955472:1,107,164...1,124,076 		JBrowse link
positive regulation of protein processing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Angptl8 angiopoietin like 8 acts_upstream_of_or_within ISO (PMID:23150577) MGI PMID:23150577 NCBI chrNW_004955495:2,205,424...2,207,611
Ensembl chrNW_004955495:2,205,485...2,207,376 		JBrowse link
G Astl astacin like metalloendopeptidase involved_in ISO (MGI:5427546|PMID:22472438) UniProt PMID:22472438 MGI:5427546 NCBI chrNW_004955470:3,719,254...3,732,598
Ensembl chrNW_004955470:3,719,254...3,732,607 		JBrowse link
G Bag2 BAG cochaperone 2 involved_in ISO (PMID:16207813) ARUK-UCL PMID:16207813 NCBI chrNW_004955502:2,984,233...2,994,457 JBrowse link
G Ccbe1 collagen and calcium binding EGF domains 1 involved_in ISO (PMID:24552833) BHF-UCL PMID:24552833 NCBI chrNW_004955402:43,551,810...43,819,731
Ensembl chrNW_004955402:43,555,924...43,819,706 		JBrowse link
G Cntn2 contactin 2 acts_upstream_of_or_within ISO (MGI:3835738|PMID:18278038) MGI PMID:18278038 MGI:3835738 NCBI chrNW_004955406:40,831,897...40,862,445
Ensembl chrNW_004955406:40,831,850...40,858,569 		JBrowse link
G Ctnnd1 catenin delta 1 acts_upstream_of_or_within ISO (MGI:3763814|PMID:17344476) MGI PMID:17344476 MGI:3763814 NCBI chrNW_004955511:2,658,879...2,705,992
Ensembl chrNW_004955511:2,658,858...2,703,958 		JBrowse link
G Fuz fuzzy planar cell polarity protein acts_upstream_of_or_within ISO (MGI:4367921|PMID:19877275) MGI PMID:19877275 MGI:4367921 NCBI chrNW_004955559:1,112,670...1,117,620
Ensembl chrNW_004955559:1,112,855...1,117,413 		JBrowse link
G Mbl2 mannose binding lectin 2 ISO Masp2 RGD PMID:20118239 RGD:7242176 NCBI chrNW_004955425:7,704,371...7,708,951
Ensembl chrNW_004955425:7,702,137...7,709,006 		JBrowse link
G Mmp14 matrix metallopeptidase 14 ISO RGD PMID:14668206 RGD:1582606 NCBI chrNW_004955409:37,438,924...37,448,704
Ensembl chrNW_004955409:37,440,541...37,448,437 		JBrowse link
G Nkd2 NKD inhibitor of WNT signaling pathway 2 involved_in ISO (PMID:15064403) BHF-UCL PMID:15064403 NCBI chrNW_004955504:507,253...527,275
Ensembl chrNW_004955504:507,388...526,407 		JBrowse link
G Nlrc4 NLR family CARD domain containing 4 involved_in ISO (PMID:15882992) ARUK-UCL PMID:15882992 NCBI chrNW_004955441:570,853...607,529
Ensembl chrNW_004955441:570,880...603,128 		JBrowse link
G Rhbdd1 rhomboid domain containing 1 involved_in ISO (MGI:5437551|PMID:22795130) UniProt PMID:22795130 MGI:5437551 NCBI chrNW_004955453:7,527,090...7,656,689
Ensembl chrNW_004955453:7,528,916...7,644,477 		JBrowse link
G Spon1 spondin 1 acts_upstream_of_or_within ISO (MGI:3607023|PMID:16227578) MGI PMID:16227578 MGI:3607023 NCBI chrNW_004955414:29,180,246...29,475,547
Ensembl chrNW_004955414:29,179,928...29,475,547 		JBrowse link
G Src SRC proto-oncogene, non-receptor tyrosine kinase acts_upstream_of_or_within ISO (MGI:3763814|PMID:17344476) MGI PMID:17344476 MGI:3763814 NCBI chrNW_004955445:19,213,210...19,227,670
Ensembl chrNW_004955445:19,215,161...19,228,695 		JBrowse link
G Timm17a translocase of inner mitochondrial membrane 17A ISO RGD PMID:9756630 RGD:13463485 NCBI chrNW_004955406:38,020,886...38,031,651
Ensembl chrNW_004955406:38,020,850...38,031,651 		JBrowse link
G Tnp1 transition protein 1 involved_in ISO (MGI:5897488|PMID:28366643) UniProt PMID:28366643 MGI:5897488 NCBI chrNW_004955453:16,387,897...16,388,513
Ensembl chrNW_004955453:16,387,527...16,388,890 		JBrowse link
G Tnp2 transition protein 2 involved_in ISO (MGI:5897488|PMID:28366643) UniProt PMID:28366643 MGI:5897488 NCBI chrNW_004955442:7,311,826...7,314,046 JBrowse link
positive regulation of protein processing in phagocytic vesicle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gsn gelsolin involved_in ISO (MGI:5619440|PMID:23325791) UniProt PMID:23325791 MGI:5619440 NCBI chrNW_004955419:6,682,202...6,733,361
Ensembl chrNW_004955419:6,682,058...6,733,361 		JBrowse link
G Myh9 myosin heavy chain 9 involved_in ISO (MGI:5619440|PMID:23325791) UniProt PMID:23325791 MGI:5619440 NCBI chrNW_004955413:22,881,759...22,972,182
Ensembl chrNW_004955413:22,881,045...22,972,450 		JBrowse link
positive regulation of proteolysis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Asph aspartate beta-hydroxylase involved_in ISO (PMID:18387192) BHF-UCL PMID:18387192 NCBI chrNW_004955444:17,116,060...17,320,966
Ensembl chrNW_004955444:17,121,559...17,318,295 		JBrowse link
G Aurkaip1 aurora kinase A interacting protein 1 acts_upstream_of_or_within ISO (PMID:12244051) MGI PMID:12244051 NCBI chrNW_004955486:9,437,511...9,438,945
Ensembl chrNW_004955486:9,437,958...9,438,857 		JBrowse link
G Bad BCL2 associated agonist of cell death involved_in ISO (PMID:18387192) BHF-UCL PMID:18387192 NCBI chrNW_004955422:20,795,585...20,809,039
Ensembl chrNW_004955422:20,795,676...20,809,245 		JBrowse link
G Bak1 BCL2 antagonist/killer 1 involved_in ISO (PMID:18387192) BHF-UCL PMID:18387192 NCBI chrNW_004955437:2,036,415...2,041,997
Ensembl chrNW_004955437:2,036,415...2,041,997 		JBrowse link
G Btrc beta-transducin repeat containing E3 ubiquitin protein ligase involved_in ISO (PMID:16885022) UniProt PMID:16885022 NCBI chrNW_004955485:8,724,375...8,846,647
Ensembl chrNW_004955485:8,724,380...8,837,741 		JBrowse link
G Capn3 calpain 3 involved_in ISO (MGI:5306562|PMID:20139084) UniProt PMID:20139084 MGI:5306562 NCBI chrNW_004955416:9,070,479...9,121,099
Ensembl chrNW_004955416:9,070,399...9,117,794 		JBrowse link
G Casp8 caspase 8 involved_in ISO (PMID:18387192) BHF-UCL PMID:18387192 NCBI chrNW_004955403:322,082...348,591
Ensembl chrNW_004955403:322,555...347,053 		JBrowse link
G Cd46 CD46 molecule ISO RGD PMID:15215199 RGD:2293559 NCBI chrNW_004955406:43,002,817...43,034,555 JBrowse link
G Cfl1 cofilin 1 ISO RGD PMID:24093776 RGD:11570550 NCBI chrNW_004955422:19,479,181...19,482,571
Ensembl chrNW_004955422:19,479,181...19,482,571 		JBrowse link
G Cln6 CLN6 transmembrane ER protein involved_in ISO (PMID:15010453) UniProt PMID:15010453 NCBI chrNW_004955450:7,876,572...7,885,305
Ensembl chrNW_004955450:7,876,522...7,886,581 		JBrowse link
G Cyfip2 cytoplasmic FMR1 interacting protein 2 involved_in ISO (PMID:18387192) BHF-UCL PMID:18387192 NCBI chrNW_004955408:11,483,891...11,586,628
Ensembl chrNW_004955408:11,462,837...11,588,378 		JBrowse link
G Ep300 E1A binding protein p300 ISO RGD PMID:16973938 RGD:2289912 NCBI chrNW_004955413:26,647,553...26,727,875
Ensembl chrNW_004955413:26,648,339...26,727,933 		JBrowse link
G Fadd Fas associated via death domain involved_in ISO (PMID:18387192) BHF-UCL PMID:18387192 NCBI chrNW_004955422:16,026,323...16,035,808
Ensembl chrNW_004955422:16,031,280...16,036,281 		JBrowse link
G Fbxw11 F-box and WD repeat domain containing 11 involved_in ISO (PMID:16885022) UniProt PMID:16885022 NCBI chrNW_004955408:24,703,477...24,834,522
Ensembl chrNW_004955408:24,687,493...24,834,345 		JBrowse link
G Fgfr4 fibroblast growth factor receptor 4 involved_in ISO (PMID:20798051) UniProt PMID:20798051 NCBI chrNW_004955408:29,370,480...29,383,531
Ensembl chrNW_004955408:29,370,468...29,383,971 		JBrowse link
G Hdac2 histone deacetylase 2 involved_in ISO (PMID:19041327) BHF-UCL PMID:19041327 NCBI chrNW_004955526:2,739,099...2,759,640
Ensembl chrNW_004955526:2,728,377...2,759,707 		JBrowse link
G Hspa8 heat shock protein family A (Hsp70) member 8 ISO RGD PMID:9987077 RGD:10059370 NCBI chrNW_004955412:23,863,513...23,867,984
Ensembl chrNW_004955412:23,862,590...23,867,984 		JBrowse link
G Ist1 IST1 factor associated with ESCRT-III involved_in ISO (PMID:20849418) UniProt PMID:20849418 NCBI chrNW_004955484:4,589,311...4,630,464
Ensembl chrNW_004955484:4,589,311...4,630,203 		JBrowse link
G Oga O-GlcNAcase ISO Degradation of calmodulin-dependent protein kinase II and alpha fodrin (RGD: 621714). RGD PMID:17573462 RGD:2305953 NCBI chrNW_004955485:8,477,615...8,509,386
Ensembl chrNW_004955485:8,478,060...8,507,420 		JBrowse link
G Ogt O-linked N-acetylglucosamine (GlcNAc) transferase involved_in ISO (PMID:21285374) UniProt PMID:21285374 NCBI chrNW_004955475:11,062,258...11,112,252
Ensembl chrNW_004955475:11,062,076...11,114,169 		JBrowse link
G Perp p53 apoptosis effector related to PMP22 involved_in ISO (PMID:18387192) BHF-UCL PMID:18387192 NCBI chrNW_004955436:21,425,321...21,430,780
Ensembl chrNW_004955436:21,417,332...21,431,312 		JBrowse link
G Plk1 polo like kinase 1 involved_in ISO (PMID:16885022) UniProt PMID:16885022 NCBI chrNW_004955493:2,206,353...2,217,231
Ensembl chrNW_004955493:2,206,353...2,217,231 		JBrowse link
G Tbc1d10a TBC1 domain family member 10A involved_in ISO (PMID:18387192) BHF-UCL PMID:18387192 NCBI chrNW_004955455:4,537,634...4,570,949
Ensembl chrNW_004955455:4,537,634...4,570,949 		JBrowse link
G Trim32 tripartite motif containing 32 involved_in ISO (PMID:18632609) BHF-UCL PMID:18632609 NCBI chrNW_004955419:11,151,751...11,168,046
Ensembl chrNW_004955419:11,151,751...11,168,041 		JBrowse link
positive regulation of proteolysis involved in protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp5if1 ATP synthase inhibitory factor subunit 1 involved_in ISO (PMID:24005319) ParkinsonsUK-UCL PMID:24005319 NCBI chrNW_004955452:7,372,917...7,375,072
Ensembl chrNW_004955452:7,373,001...7,375,856 		JBrowse link
G Ctsc cathepsin C involved_in ISO PMID:18307834 ParkinsonsUK-UCL PMID:18307834 RGD:8661625 NCBI chrNW_004955414:5,062,355...5,092,631
Ensembl chrNW_004955414:5,062,355...5,092,154 		JBrowse link
G Gba1 glucosylceramidase beta 1 involved_in ISO (PMID:21700325)
(MGI:5141165|PMID:21700325)		 ParkinsonsUK-UCL PMID:21700325 MGI:5141165 NCBI chrNW_004955545:1,682,097...1,689,373
Ensembl chrNW_004955545:1,682,097...1,689,376 		JBrowse link
G Laptm5 lysosomal protein transmembrane 5 involved_in ISO (MGI:5444793|PMID:22949502) ARUK-UCL PMID:22949502 MGI:5444793 NCBI chrNW_004955452:9,335,481...9,358,177
Ensembl chrNW_004955452:9,334,587...9,358,444 		JBrowse link
G Rgn regucalcin ISO RGD PMID:1513338 RGD:9590188 NCBI chrNW_004955516:958,416...978,829
Ensembl chrNW_004955516:955,680...978,910 		JBrowse link
positive regulation of transcription factor catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fbxw8 F-box and WD repeat domain containing 8 involved_in ISO (MGI:6148490|PMID:29153991) UniProt PMID:29153991 MGI:6148490 NCBI chrNW_004955455:14,099,888...14,204,889
Ensembl chrNW_004955455:14,100,636...14,204,792 		JBrowse link
G Mapk8 mitogen-activated protein kinase 8 involved_in ISO (MGI:6148490|PMID:29153991) UniProt PMID:29153991 MGI:6148490 NCBI chrNW_004955556:1,593,552...1,705,543
Ensembl chrNW_004955556:1,593,494...1,665,784 		JBrowse link
G Mapk9 mitogen-activated protein kinase 9 involved_in ISO (MGI:6148490|PMID:29153991) UniProt PMID:29153991 MGI:6148490 NCBI chrNW_004955408:391,094...430,638
Ensembl chrNW_004955408:391,094...430,981 		JBrowse link
G Sirt6 sirtuin 6 involved_in ISO (PMID:27457971) CACAO PMID:27457971 NCBI chrNW_004955495:4,641,883...4,650,518
Ensembl chrNW_004955495:4,644,023...4,650,083 		JBrowse link
positive regulation of ubiquitin-dependent protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agbl4 AGBL carboxypeptidase 4 acts_upstream_of_or_within ISO (MGI:6149282|PMID:29593216) MGI PMID:29593216 MGI:6149282 NCBI chrNW_004955464:8,847,401...10,195,184
Ensembl chrNW_004955464:8,880,455...10,193,907 		JBrowse link
G Axin1 axin 1 involved_in
acts_upstream_of_or_within		 ISO PMID:10228155
(MGI:3628833|PMID:16601693)		 BHF-UCL
MGI		 PMID:10228155 PMID:16601693 MGI:3628833 RGD:8553327 NCBI chrNW_004955442:16,845,728...16,898,301
Ensembl chrNW_004955442:16,843,152...16,898,430 		JBrowse link
G Ccdc22 coiled-coil domain containing 22 involved_in ISO (PMID:23563313) UniProt PMID:23563313 NCBI chrNW_004955543:719,185...731,788
Ensembl chrNW_004955543:718,996...733,753 		JBrowse link
G Cdk5rap3 CDK5 regulatory subunit associated protein 3 NOT|involved_in ISO (PMID:16173922) UniProt PMID:16173922 NCBI chrNW_004955451:13,160,811...13,170,012
Ensembl chrNW_004955451:13,120,761...13,170,073 		JBrowse link
G Clu clusterin involved_in ISO (PMID:20068069) UniProt PMID:20068069 NCBI chrNW_004955403:50,160,598...50,175,876
Ensembl chrNW_004955403:50,160,598...50,175,876 		JBrowse link
G Disc1 DISC1 scaffold protein acts_upstream_of_or_within ISO (MGI:4837265|PMID:20880836) MGI PMID:20880836 MGI:4837265 NCBI chrNW_004955492:6,946,528...7,239,328
Ensembl chrNW_004955492:6,953,389...7,239,328 		JBrowse link
G Egf epidermal growth factor involved_in ISO (MGI:4887523|PMID:20208556) BHF-UCL PMID:20208556 MGI:4887523 NCBI chrNW_004955496:325,954...401,430
Ensembl chrNW_004955496:328,075...401,569 		JBrowse link
G Fbxo22 F-box protein 22 acts_upstream_of_or_within ISO (MGI:3840749|PMID:19319192) MGI PMID:19319192 MGI:3840749 NCBI chrNW_004955450:1,152,383...1,171,257
Ensembl chrNW_004955450:1,152,383...1,171,250 		JBrowse link
G Fbxw7 F-box and WD repeat domain containing 7 involved_in ISO (PMID:20208556)
(MGI:6282935|PMID:27238018)
(PMID:27238018)		 BHF-UCL
UniProt		 PMID:20208556 PMID:27238018 MGI:6282935 NCBI chrNW_004955471:6,852,459...7,026,590
Ensembl chrNW_004955471:6,848,101...6,955,881