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ONTOLOGY REPORT - ANNOTATIONS

Term:sphingolipid biosynthetic process
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Accession:GO:0030148 term browser browse the term
Definition:The chemical reactions and pathways resulting in the formation of sphingolipids, any of a class of lipids containing the long-chain amine diol sphingosine or a closely related base (a sphingoid).
Synonyms:exact_synonym: sphingolipid anabolism;   sphingolipid biosynthesis;   sphingolipid formation;   sphingolipid synthesis
 xref: MetaCyc:PWY-5129


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sphingolipid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACER1 alkaline ceramidase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:72,704,603...72,767,474
Ensembl chr 2:72,743,643...72,769,570 		JBrowse link
G ATG7 autophagy related 7 acts_upstream_of ISO (PMID:25332431) MGI PMID:25332431 NCBI chr13:67,301,756...67,699,141
Ensembl chr13:67,417,938...67,707,654 		JBrowse link
G BCL2 BCL2 apoptosis regulator involved_in IEA InterPro GO_REF:0000002 NCBI chr 1:158,337,403...158,518,214
Ensembl chr 1:158,337,522...158,518,879 		JBrowse link
G CERKL ceramide kinase like involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23501591) Ensembl
MGI		 PMID:23501591 GO_REF:0000107 NCBI chr15:87,029,237...87,159,555
Ensembl chr15:87,029,306...87,159,566 		JBrowse link
G CERS2 ceramide synthase 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15823095) Ensembl
MGI		 PMID:15823095 GO_REF:0000107 NCBI chr 4:98,250,773...98,260,504
Ensembl chr 4:98,250,964...98,260,427 		JBrowse link
G CERS3 ceramide synthase 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16753040) Ensembl
MGI		 PMID:16753040 GO_REF:0000107 NCBI chr 1:139,027,604...139,154,830
Ensembl chr 1:139,030,642...139,136,874 		JBrowse link
G CERS4 ceramide synthase 4 acts_upstream_of_or_within ISO (PMID:15823095) MGI PMID:15823095 NCBI chr 2:71,004,418...71,047,968
Ensembl chr 2:71,004,420...71,048,248 		JBrowse link
G CERS5 ceramide synthase 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15823095) Ensembl
MGI		 PMID:15823095 GO_REF:0000107 NCBI chr 5:16,038,918...16,070,103
Ensembl chr 5:16,037,747...16,070,007 		JBrowse link
G CERS6 ceramide synthase 6 acts_upstream_of_or_within ISO (PMID:15823095) MGI PMID:15823095 NCBI chr15:74,927,088...75,261,558
Ensembl chr15:74,927,130...75,261,554 		JBrowse link
G DEGS1 delta 4-desaturase, sphingolipid 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr10:12,529,021...12,568,447
Ensembl chr10:12,557,767...12,568,978 		JBrowse link
G DEGS2 delta 4-desaturase, sphingolipid 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11937514) Ensembl
MGI
InterPro		 PMID:11937514 GO_REF:0000002 GO_REF:0000107 NCBI chr 7:121,058,102...121,131,612
Ensembl chr 7:121,058,105...121,076,328 		JBrowse link
G ELOVL1 ELOVL fatty acid elongase 1 involved_in IEA
IBA		 Ensembl
TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 6:167,881,357...167,886,125
Ensembl chr 6:167,881,352...167,886,124 		JBrowse link
G ELOVL2 ELOVL fatty acid elongase 2 involved_in IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr 7:7,651,707...7,732,353
Ensembl chr 7:7,651,601...7,774,018 		JBrowse link
G ELOVL3 ELOVL fatty acid elongase 3 involved_in IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr14:113,226,589...113,230,038
Ensembl chr14:113,226,621...113,230,208 		JBrowse link
G ELOVL4 ELOVL fatty acid elongase 4 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 1:86,163,845...86,196,036
Ensembl chr 1:86,163,868...86,195,987 		JBrowse link
G ELOVL5 ELOVL fatty acid elongase 5 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 7:46,860,768...46,932,945
Ensembl chr 7:46,860,770...46,932,926 		JBrowse link
G ELOVL6 ELOVL fatty acid elongase 6 involved_in IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr 8:112,038,670...112,190,079
Ensembl chr 8:112,027,054...112,191,274 		JBrowse link
G ELOVL7 ELOVL fatty acid elongase 7 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr16:39,588,122...39,680,273
Ensembl chr16:39,588,129...39,680,173 		JBrowse link
G GDF1 growth differentiation factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:58,951,463...58,972,692
Ensembl chr 2:58,951,727...58,974,670 		JBrowse link
G HACD1 3-hydroxyacyl-CoA dehydratase 1 involved_in IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr10:43,901,590...43,929,441
Ensembl chr10:43,897,162...43,929,409 		JBrowse link
G HACD2 3-hydroxyacyl-CoA dehydratase 2 involved_in IEA
IBA		 Ensembl
GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr13:136,834,103...136,933,564
Ensembl chr13:136,834,115...136,933,549 		JBrowse link
G HACD3 3-hydroxyacyl-CoA dehydratase 3 involved_in IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr 1:163,525,872...163,567,649
Ensembl chr 1:163,525,965...163,588,798 		JBrowse link
G HACD4 3-hydroxyacyl-CoA dehydratase 4 involved_in IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr 1:201,885,874...201,910,667
Ensembl chr 1:201,886,332...201,910,664 		JBrowse link
G KDSR 3-ketodihydrosphingosine reductase involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:15328338) InterPro
MGI
TreeGrafter
GO_Central
Ensembl		 PMID:15328338 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:158,288,544...158,329,898
Ensembl chr 1:158,288,544...158,329,881 		JBrowse link
G MSMO1 methylsterol monooxygenase 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 8:43,726,834...43,745,784
Ensembl chr 8:43,726,858...43,744,713 		JBrowse link
G ORMDL1 ORMDL sphingolipid biosynthesis regulator 1 involved_in IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr15:94,359,784...94,377,331
Ensembl chr15:94,359,358...94,377,303 		JBrowse link
G ORMDL2 ORMDL sphingolipid biosynthesis regulator 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 5:21,262,134...21,264,689
Ensembl chr 5:21,262,193...21,264,685 		JBrowse link
G ORMDL3 ORMDL sphingolipid biosynthesis regulator 3 involved_in IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr12:22,411,130...22,417,744
Ensembl chr12:22,411,587...22,417,736 		JBrowse link
G SC5D sterol-C5-desaturase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 9:48,357,115...48,372,391
Ensembl chr 9:48,357,165...48,372,386 		JBrowse link
G SPTLC1 serine palmitoyltransferase long chain base subunit 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:25332431) MGI
Ensembl		 PMID:25332431 GO_REF:0000107 NCBI chr14:3,081,964...3,138,113
Ensembl chr14:3,081,972...3,138,103 		JBrowse link
G SPTLC2 serine palmitoyltransferase long chain base subunit 2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:25332431) MGI
Ensembl		 PMID:25332431 GO_REF:0000107 NCBI chr 7:100,545,360...100,638,973
Ensembl chr 7:100,544,478...100,638,905 		JBrowse link
G SPTSSB serine palmitoyltransferase small subunit B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:26438849) Ensembl
MGI		 PMID:26438849 GO_REF:0000107 NCBI chr13:101,023,238...101,059,917
Ensembl chr13:101,023,812...101,059,885 		JBrowse link
ceramide biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACER3 alkaline ceramidase 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 9:10,985,078...11,167,386
Ensembl chr 9:10,967,857...11,162,502 		JBrowse link
G AGK acylglycerol kinase involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:15252046) Ensembl
MGI
GO_Central
TreeGrafter		 PMID:15252046 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr18:8,263,761...8,369,060
Ensembl chr18:8,263,896...8,368,972 		JBrowse link
G ALOX12B arachidonate 12-lipoxygenase, 12R type involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:53,292,530...53,302,850
Ensembl chr12:53,292,526...53,302,993 		JBrowse link
G ALOXE3 arachidonate lipoxygenase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:53,309,845...53,331,780
Ensembl chr12:53,309,848...53,331,523 		JBrowse link
G ASAH1 N-acylsphingosine amidohydrolase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:5,712,048...5,749,811
Ensembl chr17:5,712,058...5,758,821 		JBrowse link
G ASAH2 N-acylsphingosine amidohydrolase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:99,018,111...99,141,374
Ensembl chr14:99,025,005...99,129,100 		JBrowse link
G CERS2 ceramide synthase 2 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:15823095) Ensembl
MGI
GO_Central
TreeGrafter
UniProt
InterPro		 PMID:15823095 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 GO_REF:0000117 GO_REF:0000118 NCBI chr 4:98,250,773...98,260,504
Ensembl chr 4:98,250,964...98,260,427 		JBrowse link
G CERS3 ceramide synthase 3 involved_in IEA InterPro
TreeGrafter
Ensembl
UniProt		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000117 GO_REF:0000118 NCBI chr 1:139,027,604...139,154,830
Ensembl chr 1:139,030,642...139,136,874 		JBrowse link
G CERS4 ceramide synthase 4 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:12912983), (PMID:15823095) InterPro
MGI
GO_Central
TreeGrafter
UniProt
Ensembl		 PMID:12912983 PMID:15823095 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 GO_REF:0000117 GO_REF:0000118 NCBI chr 2:71,004,418...71,047,968
Ensembl chr 2:71,004,420...71,048,248 		JBrowse link
G CERS5 ceramide synthase 5 involved_in IEA
IBA		 InterPro
GO_Central
TreeGrafter
UniProt
Ensembl		 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 GO_REF:0000117 GO_REF:0000118 NCBI chr 5:16,038,918...16,070,103
Ensembl chr 5:16,037,747...16,070,007 		JBrowse link
G CERS6 ceramide synthase 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15823095) InterPro
MGI
TreeGrafter
UniProt
Ensembl		 PMID:15823095 GO_REF:0000002 GO_REF:0000107 GO_REF:0000117 GO_REF:0000118 NCBI chr15:74,927,088...75,261,558
Ensembl chr15:74,927,130...75,261,554 		JBrowse link
G CYP4F22 cytochrome P450 family 4 subfamily F member 22 involved_in IEA
IBA		 Ensembl
GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 2:62,078,403...62,110,891
Ensembl chr 2:62,081,269...62,110,899 		JBrowse link
G DEGS1 delta 4-desaturase, sphingolipid 1 involved_in
acts_upstream_of_or_within		 IBA
ISO
IEA		 (PMID:22984457) GO_Central
MGI
TreeGrafter		 PMID:22984457 GO_REF:0000033 GO_REF:0000118 NCBI chr10:12,529,021...12,568,447
Ensembl chr10:12,557,767...12,568,978 		JBrowse link
G DEGS2 delta 4-desaturase, sphingolipid 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 7:121,058,102...121,131,612
Ensembl chr 7:121,058,105...121,076,328 		JBrowse link
G ELOVL1 ELOVL fatty acid elongase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:167,881,357...167,886,125
Ensembl chr 6:167,881,352...167,886,124 		JBrowse link
G FA2H fatty acid 2-hydroxylase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:12,855,330...12,910,821
Ensembl chr 6:12,855,421...12,910,818 		JBrowse link
G GBA1 glucosylceramidase beta 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:94,583,905...94,606,689
Ensembl chr 4:94,584,134...94,609,745 		JBrowse link
G GDF1 growth differentiation factor 1 involved_in IEA InterPro
TreeGrafter
Ensembl
UniProt		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000117 GO_REF:0000118 NCBI chr 2:58,951,463...58,972,692
Ensembl chr 2:58,951,727...58,974,670 		JBrowse link
G P2RX1 purinergic receptor P2X 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16325464) Ensembl
MGI		 PMID:16325464 GO_REF:0000107 NCBI chr12:49,956,329...49,974,789
Ensembl chr12:49,956,327...49,974,671 		JBrowse link
G P2RX7 purinergic receptor P2X 7 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16325464) Ensembl
MGI		 PMID:16325464 GO_REF:0000107 NCBI chr14:31,415,188...31,476,502
Ensembl chr14:31,415,193...31,476,472 		JBrowse link
G PNPLA1 patatin like phospholipase domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:31,987,596...32,025,673
Ensembl chr 7:31,988,197...32,025,245 		JBrowse link
G SAMD8 sterile alpha motif domain containing 8 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:25605874)
(PMID:25605874), (PMID:25667419)
(PMID:25667419)		 Ensembl
MGI
TreeGrafter
GO_Central		 PMID:25605874 PMID:25667419 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr14:77,679,287...77,737,657
Ensembl chr14:77,636,149...77,737,654 		JBrowse link
G SGMS1 sphingomyelin synthase 1 acts_upstream_of_or_within
involved_in		 ISO
IBA
IEA		 (PMID:25605874) MGI
GO_Central
TreeGrafter
Ensembl		 PMID:25605874 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr14:99,147,266...99,458,111
Ensembl chr14:99,147,272...99,185,082 		JBrowse link
G SGMS2 sphingomyelin synthase 2 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:25605874) Ensembl
MGI
GO_Central
TreeGrafter		 PMID:25605874 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 8:114,052,726...114,145,946
Ensembl chr 8:114,057,603...114,076,154 		JBrowse link
G SMPD1 sphingomyelin phosphodiesterase 1 involved_in ISO
IBA
IEA		 RGD
GO_Central
TreeGrafter
Ensembl
UniProt		 PMID:17261082 GO_REF:0000033 GO_REF:0000107 GO_REF:0000117 GO_REF:0000118 RGD:1601344 NCBI chr 9:3,324,091...3,328,493
Ensembl chr 9:3,324,442...3,328,457 		JBrowse link
G SMPD2 sphingomyelin phosphodiesterase 2 involved_in ISO
IBA		 RGD
GO_Central		 PMID:12473648 GO_REF:0000033 RGD:1581395 NCBI chr 1:75,508,303...75,511,572
Ensembl chr 1:75,508,350...75,512,153 		JBrowse link
G SMPD4 sphingomyelin phosphodiesterase 4 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr14:50,663,488...50,689,355
Ensembl chr14:50,663,608...50,689,352 		JBrowse link
G SMPD5 sphingomyelin phosphodiesterase 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:639,228...643,057 JBrowse link
G SPTLC1 serine palmitoyltransferase long chain base subunit 1 acts_upstream_of_or_within
involved_in		 ISO
IEA
IBA		 (PMID:25691431)
(PMID:16216550)		 MGI
TreeGrafter
GO_Central
Ensembl		 PMID:16216550 PMID:25691431 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr14:3,081,964...3,138,113
Ensembl chr14:3,081,972...3,138,103 		JBrowse link
G SPTLC2 serine palmitoyltransferase long chain base subunit 2 acts_upstream_of_or_within
involved_in		 ISO
IBA
IEA		 (PMID:25691431)
(PMID:16216550)		 MGI
GO_Central
TreeGrafter
Ensembl		 PMID:16216550 PMID:25691431 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 7:100,545,360...100,638,973
Ensembl chr 7:100,544,478...100,638,905 		JBrowse link
G SPTLC3 serine palmitoyltransferase long chain base subunit 3 involved_in IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr17:21,769,388...21,903,269
Ensembl chr17:21,769,484...21,903,264 		JBrowse link
G SPTSSA serine palmitoyltransferase small subunit A acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:25691431) MGI
TreeGrafter
Ensembl		 PMID:25691431 GO_REF:0000107 GO_REF:0000118 NCBI chr 7:65,302,887...65,325,877
Ensembl chr 7:65,302,858...65,326,728 		JBrowse link
G SPTSSB serine palmitoyltransferase small subunit B involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:26438849) Ensembl
MGI
TreeGrafter
GO_Central		 PMID:26438849 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr13:101,023,238...101,059,917
Ensembl chr13:101,023,812...101,059,885 		JBrowse link
G TLCD3B TLC domain containing 3B involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:23275342) Ensembl
MGI
GO_Central
TreeGrafter		 PMID:23275342 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 3:18,224,652...18,231,416
Ensembl chr 3:18,223,875...18,231,844 		JBrowse link
ceramide phosphoethanolamine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SAMD8 sterile alpha motif domain containing 8 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:25667419) Ensembl
MGI		 PMID:25667419 GO_REF:0000107 NCBI chr14:77,679,287...77,737,657
Ensembl chr14:77,636,149...77,737,654 		JBrowse link
G SGMS2 sphingomyelin synthase 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:25667419) Ensembl
MGI		 PMID:25667419 GO_REF:0000107 NCBI chr 8:114,052,726...114,145,946
Ensembl chr 8:114,057,603...114,076,154 		JBrowse link
galactosylceramide biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B3GALT1 beta-1,3-galactosyltransferase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:73,772,833...74,340,060
Ensembl chr15:74,335,112...74,339,380 		JBrowse link
G B3GALT2 beta-1,3-galactosyltransferase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:613,464...623,587
Ensembl chr10:613,608...624,131 		JBrowse link
G B4GALT3 beta-1,4-galactosyltransferase 3 involved_in IEA
IBA		 Ensembl
GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 4:89,278,256...89,284,407
Ensembl chr 4:89,278,439...89,284,400 		JBrowse link
G FA2H fatty acid 2-hydroxylase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:12,855,330...12,910,821
Ensembl chr 6:12,855,421...12,910,818 		JBrowse link
G GAL3ST1 galactose-3-O-sulfotransferase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:10727929) Ensembl
MGI
TreeGrafter
GO_Central		 PMID:10727929 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr14:47,455,089...47,476,459
Ensembl chr14:47,457,787...47,476,455 		JBrowse link
G UGT8 UDP glycosyltransferase 8 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 8:108,233,134...108,315,284
Ensembl chr 8:108,233,143...108,314,921 		JBrowse link
ganglioside biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AK1 adenylate kinase 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 1:268,355,032...268,365,659
Ensembl chr 1:268,355,033...268,365,598 		JBrowse link
G B3GALT4 beta-1,3-galactosyltransferase 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:29,643,049...29,644,847
Ensembl chr 7:29,643,182...29,648,604 		JBrowse link
G B4GALNT1 beta-1,4-N-acetyl-galactosaminyltransferase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:10021458) Ensembl
MGI
GO_Central
TreeGrafter		 PMID:10021458 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 5:22,889,654...22,897,386
Ensembl chr 5:22,889,656...22,897,508 		JBrowse link
G ST6GALNAC3 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 involved_in IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr 6:136,633,410...137,201,213
Ensembl chr 6:136,633,441...137,201,252 		JBrowse link
G ST6GALNAC4 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 4 involved_in IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr 1:268,391,851...268,402,449
Ensembl chr 1:268,391,855...268,402,407 		JBrowse link
G ST6GALNAC5 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 5 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:136,207,838...136,391,083
Ensembl chr 6:136,204,374...136,390,995 		JBrowse link
G ST6GALNAC6 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10702226) TreeGrafter
MGI		 PMID:10702226 GO_REF:0000118 NCBI chr 1:268,371,569...268,383,559 JBrowse link
G ST8SIA2 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:86,450,302...86,514,232
Ensembl chr 7:86,446,149...86,514,393 		JBrowse link
G ST8SIA3 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:106,683,536...106,701,165
Ensembl chr 1:106,683,562...106,696,300 		JBrowse link
G ST8SIA4 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:106,754,831...106,845,806
Ensembl chr 2:106,754,701...106,845,830 		JBrowse link
G ST8SIA6 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:43,601,677...43,755,154
Ensembl chr10:43,602,908...43,755,277 		JBrowse link
ganglioside biosynthetic process via lactosylceramide term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B4GALT5 beta-1,4-galactosyltransferase 5 involved_in ISS UniProt GO_REF:0000024 NCBI chr17:51,257,273...51,334,566
Ensembl chr17:51,259,813...51,334,020 		JBrowse link
G B4GALT6 beta-1,4-galactosyltransferase 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:115,525,515...115,593,265
Ensembl chr 6:115,524,636...115,593,270 		JBrowse link
G ST3GAL1 ST3 beta-galactoside alpha-2,3-sialyltransferase 1 involved_in IEA
IBA		 Ensembl
GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 4:7,814,492...7,911,053
Ensembl chr 4:7,896,554...7,909,505 		JBrowse link
G ST3GAL2 ST3 beta-galactoside alpha-2,3-sialyltransferase 2 involved_in IEA
IBA		 Ensembl
TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 6:13,402,336...13,456,495
Ensembl chr 6:13,402,345...13,419,378 		JBrowse link
G ST3GAL3 ST3 beta-galactoside alpha-2,3-sialyltransferase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:167,363,348...167,596,892
Ensembl chr 6:167,363,347...167,595,835 		JBrowse link
globoside biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G A4GALT alpha 1,4-galactosyltransferase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16476743)
(PMID:22875802)		 Ensembl
MGI		 PMID:16476743 PMID:22875802 GO_REF:0000107 NCBI chr 5:6,083,793...6,105,921
Ensembl chr 5:6,083,444...6,105,924 		JBrowse link
globoside biosynthetic process via lactosylceramide term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ST3GAL2 ST3 beta-galactoside alpha-2,3-sialyltransferase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:13,402,336...13,456,495
Ensembl chr 6:13,402,345...13,419,378 		JBrowse link
glucosylceramide biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FA2H fatty acid 2-hydroxylase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:12,855,330...12,910,821
Ensembl chr 6:12,855,421...12,910,818 		JBrowse link
G UGCG UDP-glucose ceramide glucosyltransferase involved_in IEA
IBA		 Ensembl
TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:252,651,850...252,690,817
Ensembl chr 1:252,651,879...252,688,550 		JBrowse link
glycosphingolipid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G A3GALT2 alpha 1,3-galactosyltransferase 2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:22875802)
PMID:10854427		 RGD
MGI
Ensembl		 PMID:10854427 PMID:22875802 GO_REF:0000107 RGD:1299594 NCBI chr 6:89,557,492...89,562,835
Ensembl chr 6:89,558,423...89,562,490 		JBrowse link
G A4GALT alpha 1,4-galactosyltransferase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 5:6,083,793...6,105,921
Ensembl chr 5:6,083,444...6,105,924 		JBrowse link
G B4GALNT1 beta-1,4-N-acetyl-galactosaminyltransferase 1 involved_in ISO PMID:1606358 UniProt PMID:1606358 RGD:21201272 NCBI chr 5:22,889,654...22,897,386
Ensembl chr 5:22,889,656...22,897,508 		JBrowse link
G B4GALT6 beta-1,4-galactosyltransferase 6 involved_in ISO
IBA		 RGD
GO_Central		 PMID:9593693 GO_REF:0000033 RGD:70807 NCBI chr 6:115,525,515...115,593,265
Ensembl chr 6:115,524,636...115,593,270 		JBrowse link
G FUT4 fucosyltransferase 4 involved_in ISO (PMID:29593094) UniProt PMID:29593094 NCBI chr 9:26,679,540...26,686,217
Ensembl chr 9:26,679,868...26,681,541 		JBrowse link
G FUT9 fucosyltransferase 9 involved_in IEA Ensembl GO_REF:0000107
G LOC100513844 galactoside 3(4)-L-fucosyltransferase involved_in ISO (PMID:29593094) UniProt PMID:29593094 NCBI chr 2:73,152,451...73,171,616 JBrowse link
G ST6GALNAC5 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 5 involved_in ISO (MGI:1346847|PMID:10521438) BHF-UCL PMID:10521438 MGI:1346847 NCBI chr 6:136,207,838...136,391,083
Ensembl chr 6:136,204,374...136,390,995 		JBrowse link
G ST8SIA5 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5 involved_in ISO PMID:1606358 UniProt PMID:1606358 RGD:21201272 NCBI chr 1:96,291,794...96,375,909
Ensembl chr 1:96,297,034...96,375,868 		JBrowse link
G TM9SF2 transmembrane 9 superfamily member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:68,407,834...68,469,956
Ensembl chr11:68,404,975...68,469,953 		JBrowse link
lactosylceramide biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B4GALT4 beta-1,4-galactosyltransferase 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:140,969,561...141,003,936
Ensembl chr13:140,969,602...141,003,929 		JBrowse link
G B4GALT6 beta-1,4-galactosyltransferase 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:115,525,515...115,593,265
Ensembl chr 6:115,524,636...115,593,270 		JBrowse link
negative regulation of ceramide biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ORMDL1 ORMDL sphingolipid biosynthesis regulator 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:25691431) MGI
Ensembl		 PMID:25691431 GO_REF:0000107 NCBI chr15:94,359,784...94,377,331
Ensembl chr15:94,359,358...94,377,303 		JBrowse link
G ORMDL2 ORMDL sphingolipid biosynthesis regulator 2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:25691431) MGI
Ensembl		 PMID:25691431 GO_REF:0000107 NCBI chr 5:21,262,134...21,264,689
Ensembl chr 5:21,262,193...21,264,685 		JBrowse link
G ORMDL3 ORMDL sphingolipid biosynthesis regulator 3 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:25691431) MGI
Ensembl		 PMID:25691431 GO_REF:0000107 NCBI chr12:22,411,130...22,417,744
Ensembl chr12:22,411,587...22,417,736 		JBrowse link
G SPHK1 sphingosine kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:5,114,946...5,122,580
Ensembl chr12:5,114,947...5,120,083 		JBrowse link
negative regulation of sphingolipid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCA2 ATP binding cassette subfamily A member 2 involved_in IEA Ensembl GO_REF:0000107
G ATG7 autophagy related 7 acts_upstream_of_or_within ISO (PMID:25332431) MGI PMID:25332431 NCBI chr13:67,301,756...67,699,141
Ensembl chr13:67,417,938...67,707,654 		JBrowse link
omega-hydroxyceramide biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PNPLA1 patatin like phospholipase domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:31,987,596...32,025,673
Ensembl chr 7:31,988,197...32,025,245 		JBrowse link
phytosphingosine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACER3 alkaline ceramidase 3 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 9:10,985,078...11,167,386
Ensembl chr 9:10,967,857...11,162,502 		JBrowse link
positive regulation of ceramide biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CCN1 cellular communication network factor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19364818) Ensembl
MGI		 PMID:19364818 GO_REF:0000107 NCBI chr 4:130,392,404...130,395,179
Ensembl chr 4:130,392,407...130,395,150 		JBrowse link
G ENPP7 ectonucleotide pyrophosphatase/phosphodiesterase 7 involved_in ISO (MGI:4947032|PMID:21177474) UniProt PMID:21177474 MGI:4947032 NCBI chr12:2,612,543...2,619,541
Ensembl chr12:2,612,574...2,619,519 		JBrowse link
G PLA2G6 phospholipase A2 group VI involved_in ISO
IEA
IBA		 RGD
TreeGrafter
GO_Central		 PMID:18936091 GO_REF:0000033 GO_REF:0000118 RGD:6482750 NCBI chr 5:9,713,809...9,777,921
Ensembl chr 5:9,713,873...9,777,918 		JBrowse link
G PRKCD protein kinase C delta involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:35,290,835...35,323,245
Ensembl chr13:35,290,610...35,323,356 		JBrowse link
G SIRT3 sirtuin 3 involved_in ISO (MGI:5755322|PMID:26620563) UniProt PMID:26620563 MGI:5755322 NCBI chr 2:38,465...55,074
Ensembl chr 2:38,464...55,101 		JBrowse link
G SMPD3 sphingomyelin phosphodiesterase 3 ISO RGD PMID:20096352 RGD:10041064 NCBI chr 6:28,938,287...29,025,397
Ensembl chr 6:28,938,290...29,025,357 		JBrowse link
G SPHK2 sphingosine kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:53,982,911...53,986,779
Ensembl chr 6:53,979,012...53,986,768 		JBrowse link
G ZNF750 zinc finger protein 750 acts_upstream_of_or_within ISO (PMID:37115925) MGI PMID:37115925 NCBI chr12:398,498...407,812 JBrowse link
regulation of ceramide biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ORMDL1 ORMDL sphingolipid biosynthesis regulator 1 involved_in
acts_upstream_of		 IEA
ISO		 (PMID:31880535) UniProt
MGI
Ensembl		 PMID:31880535 GO_REF:0000104 GO_REF:0000107 GO_REF:0000117 NCBI chr15:94,359,784...94,377,331
Ensembl chr15:94,359,358...94,377,303 		JBrowse link
G ORMDL2 ORMDL sphingolipid biosynthesis regulator 2 involved_in IEA UniProt GO_REF:0000104 GO_REF:0000117 NCBI chr 5:21,262,134...21,264,689
Ensembl chr 5:21,262,193...21,264,685 		JBrowse link
G ORMDL3 ORMDL sphingolipid biosynthesis regulator 3 involved_in
acts_upstream_of		 IEA
ISO		 (PMID:31880535) Ensembl
MGI
UniProt		 PMID:31880535 GO_REF:0000104 GO_REF:0000107 GO_REF:0000117 NCBI chr12:22,411,130...22,417,744
Ensembl chr12:22,411,587...22,417,736 		JBrowse link
G PRKCD protein kinase C delta involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:35,290,835...35,323,245
Ensembl chr13:35,290,610...35,323,356 		JBrowse link
G SAMD8 sterile alpha motif domain containing 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:77,679,287...77,737,657
Ensembl chr14:77,636,149...77,737,654 		JBrowse link
regulation of sphingolipid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ORMDL1 ORMDL sphingolipid biosynthesis regulator 1 involved_in
acts_upstream_of		 IEA
ISO		 (PMID:31880535) Ensembl
MGI		 PMID:31880535 GO_REF:0000107 NCBI chr15:94,359,784...94,377,331
Ensembl chr15:94,359,358...94,377,303 		JBrowse link
G ORMDL3 ORMDL sphingolipid biosynthesis regulator 3 involved_in
acts_upstream_of		 IEA
ISO		 (PMID:28275141)
(PMID:31880535)		 Ensembl
MGI		 PMID:28275141 PMID:31880535 GO_REF:0000107 NCBI chr12:22,411,130...22,417,744
Ensembl chr12:22,411,587...22,417,736 		JBrowse link
sphinganine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SPTLC1 serine palmitoyltransferase long chain base subunit 1 acts_upstream_of_or_within ISO (PMID:19416652) MGI PMID:19416652 NCBI chr14:3,081,964...3,138,113
Ensembl chr14:3,081,972...3,138,103 		JBrowse link
G SPTLC2 serine palmitoyltransferase long chain base subunit 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9363775) Ensembl
MGI		 PMID:9363775 GO_REF:0000107 NCBI chr 7:100,545,360...100,638,973
Ensembl chr 7:100,544,478...100,638,905 		JBrowse link
sphinganine-1-phosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SPHK2 sphingosine kinase 2 involved_in IEA
IBA		 Ensembl
GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 6:53,982,911...53,986,779
Ensembl chr 6:53,979,012...53,986,768 		JBrowse link
sphingoid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SPTLC3 serine palmitoyltransferase long chain base subunit 3 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:19648650) MGI
Ensembl		 PMID:19648650 GO_REF:0000107 NCBI chr17:21,769,388...21,903,269
Ensembl chr17:21,769,484...21,903,264 		JBrowse link
sphingomyelin biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCA8 ATP binding cassette subfamily A member 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:11,366,734...11,447,297
Ensembl chr12:11,373,238...11,447,295 		JBrowse link
G ORMDL1 ORMDL sphingolipid biosynthesis regulator 1 involved_in
acts_upstream_of		 IEA
ISO		 (PMID:31880535) Ensembl
MGI		 PMID:31880535 GO_REF:0000107 NCBI chr15:94,359,784...94,377,331
Ensembl chr15:94,359,358...94,377,303 		JBrowse link
G ORMDL3 ORMDL sphingolipid biosynthesis regulator 3 involved_in
acts_upstream_of		 IEA
ISO		 (PMID:31880535) Ensembl
MGI		 PMID:31880535 GO_REF:0000107 NCBI chr12:22,411,130...22,417,744
Ensembl chr12:22,411,587...22,417,736 		JBrowse link
G OSBP oxysterol binding protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:11,876,294...11,911,660
Ensembl chr 2:11,876,324...11,911,656 		JBrowse link
G PEMT phosphatidylethanolamine N-methyltransferase acts_upstream_of_or_within ISO (PMID:25667419) MGI PMID:25667419 NCBI chr12:60,880,367...60,919,279 JBrowse link
G SGMS1 sphingomyelin synthase 1 involved_in IEA
IBA		 Ensembl
GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr14:99,147,266...99,458,111
Ensembl chr14:99,147,272...99,185,082 		JBrowse link
G SGMS2 sphingomyelin synthase 2 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:25667419) Ensembl
MGI
GO_Central
TreeGrafter		 PMID:25667419 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 8:114,052,726...114,145,946
Ensembl chr 8:114,057,603...114,076,154 		JBrowse link
G SPTLC1 serine palmitoyltransferase long chain base subunit 1 involved_in
acts_upstream_of_or_within		 ISO (MGI:5749304|PMID:26301690)
(PMID:16216550)		 UniProt
MGI		 PMID:16216550 PMID:26301690 MGI:5749304 NCBI chr14:3,081,964...3,138,113
Ensembl chr14:3,081,972...3,138,103 		JBrowse link
G SPTLC2 serine palmitoyltransferase long chain base subunit 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16216550) Ensembl
MGI		 PMID:16216550 GO_REF:0000107 NCBI chr 7:100,545,360...100,638,973
Ensembl chr 7:100,544,478...100,638,905 		JBrowse link
G VAPA VAMP associated protein A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:98,212,335...98,254,272
Ensembl chr 6:98,210,053...98,254,226 		JBrowse link
sphingosine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCA2 ATP binding cassette subfamily A member 2 acts_upstream_of_positive_effect
involved_in		 ISO
IEA		 (PMID:26510981) ARUK-UCL
Ensembl		 PMID:26510981 GO_REF:0000107
G ACER1 alkaline ceramidase 1 involved_in IEA
IBA		 UniProt
GO_Central
TreeGrafter
Ensembl		 GO_REF:0000033 GO_REF:0000107 GO_REF:0000117 GO_REF:0000118 NCBI chr 2:72,704,603...72,767,474
Ensembl chr 2:72,743,643...72,769,570 		JBrowse link
G ACER2 alkaline ceramidase 2 involved_in IEA
IBA		 Ensembl
GO_Central
TreeGrafter
UniProt		 GO_REF:0000033 GO_REF:0000107 GO_REF:0000117 GO_REF:0000118 NCBI chr 1:203,387,669...203,415,018
Ensembl chr 1:203,386,791...203,414,972 		JBrowse link
G ACER3 alkaline ceramidase 3 involved_in IEA Ensembl
UniProt		 GO_REF:0000107 GO_REF:0000117 NCBI chr 9:10,985,078...11,167,386
Ensembl chr 9:10,967,857...11,162,502 		JBrowse link
G AGK acylglycerol kinase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr18:8,263,761...8,369,060
Ensembl chr18:8,263,896...8,368,972 		JBrowse link
G ASAH1 N-acylsphingosine amidohydrolase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:5,712,048...5,749,811
Ensembl chr17:5,712,058...5,758,821 		JBrowse link
G ASAH2 N-acylsphingosine amidohydrolase 2 involved_in IEA
IBA		 Ensembl
TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr14:99,018,111...99,141,374
Ensembl chr14:99,025,005...99,129,100 		JBrowse link
G GBA1 glucosylceramidase beta 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:94,583,905...94,606,689
Ensembl chr 4:94,584,134...94,609,745 		JBrowse link
G SPHK1 sphingosine kinase 1 involved_in IEA
IBA		 Ensembl
TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr12:5,114,946...5,122,580
Ensembl chr12:5,114,947...5,120,083 		JBrowse link
G SPHK2 sphingosine kinase 2 involved_in IEA
IBA		 Ensembl
TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 6:53,982,911...53,986,779
Ensembl chr 6:53,979,012...53,986,768 		JBrowse link
G SPTLC1 serine palmitoyltransferase long chain base subunit 1 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:16216550) Ensembl
MGI
TreeGrafter
GO_Central		 PMID:16216550 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr14:3,081,964...3,138,113
Ensembl chr14:3,081,972...3,138,103 		JBrowse link
G SPTLC2 serine palmitoyltransferase long chain base subunit 2 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:16216550) Ensembl
MGI
GO_Central
TreeGrafter		 PMID:16216550 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 7:100,545,360...100,638,973
Ensembl chr 7:100,544,478...100,638,905 		JBrowse link
G SPTLC3 serine palmitoyltransferase long chain base subunit 3 involved_in IEA
IBA		 Ensembl
TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr17:21,769,388...21,903,269
Ensembl chr17:21,769,484...21,903,264 		JBrowse link
G SPTSSA serine palmitoyltransferase small subunit A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:65,302,887...65,325,877
Ensembl chr 7:65,302,858...65,326,728 		JBrowse link
G SPTSSB serine palmitoyltransferase small subunit B involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:101,023,238...101,059,917
Ensembl chr13:101,023,812...101,059,885 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17799
    metabolic process 10358
      biosynthetic process 7358
        cellular biosynthetic process 6978
          membrane lipid biosynthetic process 142
            sphingolipid biosynthetic process 99
              ceramide biosynthetic process + 69
              ceramide phosphoethanolamine biosynthetic process 2
              glycosphingolipid biosynthetic process + 31
              negative regulation of sphingolipid biosynthetic process + 6
              positive regulation of sphingolipid biosynthetic process + 8
              regulation of sphingolipid biosynthetic process + 15
              sphinganine-1-phosphate biosynthetic process 1
              sphingoid biosynthetic process + 15
              sphingolipid biosynthesis involved in endoplasmic reticulum membrane organization 0
              sphingomyelin biosynthetic process 10
Path 2
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  biological_process 17799
    metabolic process 10358
      primary metabolic process 9009
        lipid metabolic process 1348
          cellular lipid metabolic process 1018
            membrane lipid metabolic process 208
              membrane lipid biosynthetic process 142
                sphingolipid biosynthetic process 99
                  ceramide biosynthetic process + 69
                  ceramide phosphoethanolamine biosynthetic process 2
                  glycosphingolipid biosynthetic process + 31
                  negative regulation of sphingolipid biosynthetic process + 6
                  positive regulation of sphingolipid biosynthetic process + 8
                  regulation of sphingolipid biosynthetic process + 15
                  sphinganine-1-phosphate biosynthetic process 1
                  sphingoid biosynthetic process + 15
                  sphingolipid biosynthesis involved in endoplasmic reticulum membrane organization 0
                  sphingomyelin biosynthetic process 10
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