Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   

ONTOLOGY REPORT - ANNOTATIONS


Term:clathrin coat of coated pit
go back to main search page
Accession:GO:0030132 term browser browse the term
Definition:The coat found on coated pits and the coated vesicles derived from coated pits; comprises clathrin and the AP-2 adaptor complex.


show annotations for term's descendants           Sort by:
 
clathrin coat of coated pit term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clta clathrin, light chain A part_of NAS
IEA
GO_REF:0000002 InterPro PMID:3563513 GO_REF:0000002, RGD:70686 NCBI chr 5:59,490,689...59,509,139
Ensembl chr 5:59,491,096...59,509,138
JBrowse link
G Cltb clathrin, light chain B part_of NAS PMID:3563513 RGD
UniProt
PMID:3563513, PMID:3563513 RGD:70686, RGD:70686 NCBI chr17:10,537,348...10,554,999
Ensembl chr17:10,537,365...10,554,989
JBrowse link
G Cltc clathrin heavy chain part_of IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr10:74,014,560...74,070,578
Ensembl chr10:74,014,562...74,070,266
JBrowse link
G Dab2 DAB adaptor protein 2 part_of ISO (MGI:5442517|PMID:11247302) RGD PMID:11247302 MGI:5442517 NCBI chr 2:55,747,353...55,768,848
Ensembl chr 2:55,747,318...55,768,270
JBrowse link
G Eps15 epidermal growth factor receptor pathway substrate 15 part_of IBA
ISO
PMID:21873635
(MGI:5305417|PMID:18434600)
RGD PMID:18434600, PMID:21873635 MGI:5305417, RGD:13792537 NCBI chr 5:128,923,809...129,022,268
Ensembl chr 5:128,923,934...129,022,054
JBrowse link
G Eps15l1 epidermal growth factor receptor pathway substrate 15-like 1 part_of IBA
ISO
PMID:21873635
(MGI:5305417|PMID:18434600)
RGD PMID:18434600, PMID:21873635 MGI:5305417, RGD:13792537 NCBI chr16:19,127,635...19,202,991
Ensembl chr16:19,127,724...19,203,003
JBrowse link
G Picalm phosphatidylinositol binding clathrin assembly protein colocalizes_with ISO (PMID:10436022), (PMID:16262731) RGD PMID:10436022 PMID:16262731 NCBI chr 1:154,377,229...154,458,966
Ensembl chr 1:154,377,247...154,458,425
JBrowse link
G Synj1 synaptojanin 1 part_of IDA PMID:9428629 ParkinsonsUK-UCL PMID:9428629 RGD:11059574 NCBI chr11:31,105,784...31,181,573
Ensembl chr11:31,104,787...31,180,642
JBrowse link
AP-2 adaptor complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ap2a1 adaptor related protein complex 2 subunit alpha 1 part_of ISO
IBA
(PMID:23676497)
(MGI:5514106|PMID:23676497)
PMID:21873635
RGD PMID:23676497, PMID:21873635 MGI:5514106, RGD:13792537 NCBI chr 1:100,896,582...100,926,443
Ensembl chr 1:100,896,947...100,926,335
JBrowse link
G Ap2a2 adaptor related protein complex 2 subunit alpha 2 part_of IEA
ISO
IMP
IBA
GO_REF:0000002
(MGI:5514106|PMID:23676497)
PMID:12086608
GO_REF:0000107
PMID:21873635
(PMID:23676497)
InterPro
RGD
Ensembl
PMID:23676497, PMID:12086608, PMID:21873635 GO_REF:0000002 GO_REF:0000107 MGI:5514106, RGD:12793054, RGD:13792537 NCBI chr 1:214,534,217...214,607,497
Ensembl chr 1:214,534,284...214,606,169
JBrowse link
G Ap2b1 adaptor related protein complex 2 subunit beta 1 part_of ISO (PMID:12086608), (PMID:23676497)
(MGI:5514106|PMID:23676497)
RGD PMID:12086608 PMID:23676497 MGI:5514106 NCBI chr10:70,516,462...70,621,973
Ensembl chr10:70,520,206...70,621,977
JBrowse link
G Ap2m1 adaptor related protein complex 2 subunit mu 1 part_of IDA
ISO
IBA
PMID:12086608
(MGI:5514106|PMID:23676497)
PMID:21873635
(PMID:23676497)
RGD PMID:23676497, PMID:12086608, PMID:21873635 MGI:5514106, RGD:12793054, RGD:13792537 NCBI chr11:84,041,184...84,047,542
Ensembl chr11:84,041,184...84,047,546
JBrowse link
G Ap2s1 adaptor related protein complex 2 subunit sigma 1 part_of IDA
ISO
(MGI:5882913|PMID:12086608)
PMID:2040623
RGD PMID:12086608, PMID:7593184, PMID:2040623 MGI:5882913, RGD:2306270, RGD:727584 NCBI chr 1:78,671,238...78,682,847
Ensembl chr 1:78,671,121...78,682,871
JBrowse link
G Btbd8 BTB domain containing 8 colocalizes_with
part_of
IDA
ISO
PMID:29262337
(MGI:6104538|PMID:29262337)
(PMID:29262337)
RGD PMID:29262337, PMID:29262337 MGI:6104538, RGD:13601995 NCBI chr14:3,282,422...3,351,740
Ensembl chr14:3,284,089...3,300,200
JBrowse link
G Eps15 epidermal growth factor receptor pathway substrate 15 part_of ISO (MGI:4887327|PMID:17626015) RGD PMID:17626015 MGI:4887327 NCBI chr 5:128,923,809...129,022,268
Ensembl chr 5:128,923,934...129,022,054
JBrowse link
G Picalm phosphatidylinositol binding clathrin assembly protein colocalizes_with
part_of
ISO
IEA
(PMID:16262731)
GO_REF:0000107
RGD
Ensembl
PMID:16262731 GO_REF:0000107 NCBI chr 1:154,377,229...154,458,966
Ensembl chr 1:154,377,247...154,458,425
JBrowse link
G Sgip1 SH3GL interacting endocytic adaptor 1 part_of ISS
ISO
IEA
PMID:17626015
(MGI:4887327|PMID:17626015)
GO_REF:0000107
RGD
Ensembl
PMID:17626015, PMID:17626015 GO_REF:0000107 MGI:4887327, RGD:8554282 NCBI chr 5:122,300,415...122,498,478
Ensembl chr 5:122,390,522...122,491,203
JBrowse link
G Slc18a3 solute carrier family 18 member A3 part_of IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:14724281, PMID:21873635 RGD:2317430, RGD:13792537 NCBI chr16:8,682,668...8,685,529
Ensembl chr16:8,682,669...8,685,529
JBrowse link
G Tbc1d5 TBC1 domain family, member 5 colocalizes_with ISO (PMID:24603492) RGD PMID:24603492 NCBI chr 9:1,144,641...1,747,732
Ensembl chr 9:1,145,700...1,746,397
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 20126
    cellular anatomical entity 19825
      endomembrane system 3985
        clathrin-coated pit 65
          clathrin coat of coated pit 17
            AP-2 adaptor complex 11
Path 2
Term Annotations click to browse term
  cellular_component 20126
    cellular anatomical entity 19825
      membrane 10001
        coated membrane 100
          membrane coat 100
            clathrin coat 48
              clathrin coat of coated pit 17
                AP-2 adaptor complex 11
paths to the root