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ONTOLOGY REPORT - ANNOTATIONS


Term:lymphocyte differentiation
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Accession:GO:0030098 term browser browse the term
Definition:The process in which a relatively unspecialized precursor cell acquires specialized features of a lymphocyte. A lymphocyte is a leukocyte commonly found in the blood and lymph that has the characteristics of a large nucleus, a neutral staining cytoplasm, and prominent heterochromatin.
Comment:Note that immunologists typically use the word 'development' to refer to cells of B or T cell lineages undergoing the process that GO describes as 'cell differentiation'.
Synonyms:exact_synonym: lymphocyte cell differentiation;   lymphocytic blood cell differentiation
 related_synonym: lymphocyte development
 alt_id: GO:0046650


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lymphocyte differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CBFB core-binding factor subunit beta acts_upstream_of_or_within ISO (PMID:12434155) MGI PMID:12434155 NCBI chr 5:60,356,303...60,445,793
Ensembl chr 5:60,356,272...60,445,729
JBrowse link
G FBXO7 F-box protein 7 acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr19:15,300,135...15,324,256
Ensembl chr19:15,300,158...15,323,956
JBrowse link
G FLT3 fms related receptor tyrosine kinase 3 acts_upstream_of_or_within ISO (PMID:12387740) MGI PMID:12387740 NCBI chr 3:7,117,579...7,222,600
Ensembl chr 3:7,116,947...7,222,849
JBrowse link
G FLT3LG fms related receptor tyrosine kinase 3 ligand acts_upstream_of_or_within ISO (PMID:12387740) MGI PMID:12387740 NCBI chr 6:42,653,820...42,665,017
Ensembl chr 6:42,654,412...42,660,458
JBrowse link
G IKZF1 IKAROS family zinc finger 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:8,398,902...8,500,431
Ensembl chr21:8,402,719...8,484,723
JBrowse link
G IL2RG interleukin 2 receptor subunit gamma acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr  X:60,905,011...60,915,723
Ensembl chr  X:60,905,343...60,909,149
JBrowse link
G LOC103243413 signal transducer and activator of transcription 5B acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr16:63,997,486...64,070,392
Ensembl chr16:63,997,441...64,070,445
JBrowse link
G LY6D lymphocyte antigen 6 family member D involved_in IEA Ensembl
TreeGrafter
InterPro
GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr 8:137,033,609...137,038,589 JBrowse link
G PRKDC protein kinase, DNA-activated, catalytic subunit acts_upstream_of_or_within ISO (PMID:8133891) MGI PMID:8133891 NCBI chr 8:43,915,226...44,119,547
Ensembl chr 8:43,914,636...44,119,541
JBrowse link
G RELB RELB proto-oncogene, NF-kB subunit involved_in ISO (PMID:26385063) UniProt PMID:26385063 NCBI chr 6:38,463,414...38,500,487 JBrowse link
G RELB RELB proto-oncogene, NF-kB subunit involved_in IEA Ensembl GO_REF:0000107 Ensembl chr 6:38,464,860...38,500,591 JBrowse link
G SPI1 Spi-1 proto-oncogene acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:17,935,037...17,961,638
Ensembl chr 1:17,935,922...17,961,717
JBrowse link
G STAT5A signal transducer and activator of transcription 5A acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr16:63,959,265...63,986,627
Ensembl chr16:63,960,515...63,985,026
JBrowse link
G TCF3 transcription factor 3 acts_upstream_of_or_within ISO (PMID:18958875) MGI PMID:18958875 NCBI chr 6:1,393,147...1,440,515
Ensembl chr 6:1,393,107...1,440,479
JBrowse link
G TOX thymocyte selection associated high mobility group box acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 8:54,777,490...55,086,819
Ensembl chr 8:54,776,015...54,927,091
JBrowse link
alpha-beta T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABL1 ABL proto-oncogene 1, non-receptor tyrosine kinase acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr12:7,258,932...7,435,658
Ensembl chr12:7,256,648...7,312,734
JBrowse link
G ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase acts_upstream_of_or_within ISO (PMID:18025176) MGI PMID:18025176 NCBI chr25:50,106,621...50,244,002
Ensembl chr25:50,216,483...50,241,621
JBrowse link
G ADA adenosine deaminase acts_upstream_of ISO (PMID:11067867), (PMID:16670300)
(PMID:11067867), (PMID:12163459), (PMID:16670300)
MGI PMID:11067867 PMID:12163459 PMID:16670300 NCBI chr 2:19,167,209...19,200,233 JBrowse link
G ANXA1 annexin A1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:84,207,818...84,226,438
Ensembl chr12:84,207,820...84,226,562
JBrowse link
G BCL11B BCL11 transcription factor B acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr24:77,122,591...77,222,562
Ensembl chr24:77,122,689...77,221,454
JBrowse link
G BLM BLM RecQ like helicase acts_upstream_of_or_within ISO (PMID:17210642) MGI PMID:17210642 NCBI chr29:9,046,485...9,152,320
Ensembl chr29:9,045,373...9,152,254
JBrowse link
G BRAF B-Raf proto-oncogene, serine/threonine kinase acts_upstream_of_or_within ISO (PMID:23334952) MGI PMID:23334952 NCBI chr21:109,495,525...109,690,261 JBrowse link
G BRAF B-Raf proto-oncogene, serine/threonine kinase acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 Ensembl chr21:109,545,491...109,690,195 JBrowse link
G GLI3 GLI family zinc finger 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr21:16,386,700...16,665,648
Ensembl chr21:16,549,789...16,662,238
JBrowse link
G LEF1 lymphoid enhancer binding factor 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 7:55,974,770...56,096,214
Ensembl chr 7:55,990,621...56,094,110
JBrowse link
G LOC103241092 tyrosine-protein kinase ZAP-70 acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr14:1,403,294...1,430,205
Ensembl chr14:1,404,325...1,431,015
JBrowse link
G PRR7 proline rich 7, synaptic involved_in IEA Ensembl GO_REF:0000107 NCBI chr23:79,458,347...79,467,421
Ensembl chr23:79,466,186...79,467,257
JBrowse link
G PTCRA pre T cell antigen receptor alpha involved_in ISO (PMID:38422122) UniProt PMID:38422122 NCBI chr17:29,229,095...29,237,665 JBrowse link
G PTCRA pre T cell antigen receptor alpha involved_in IEA Ensembl GO_REF:0000107 Ensembl chr17:29,228,703...29,237,703 JBrowse link
G RORC RAR related orphan receptor C acts_upstream_of_or_within ISO (PMID:15247480) MGI PMID:15247480 NCBI chr20:11,854,911...11,880,221
Ensembl chr20:11,855,005...11,879,717
JBrowse link
G RPL22 ribosomal protein L22 acts_upstream_of_or_within ISO (PMID:17555992) MGI PMID:17555992 NCBI chr20:125,539,503...125,553,775 JBrowse link
G SHH sonic hedgehog signaling molecule acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr21:123,929,937...123,942,451
Ensembl chr21:123,932,900...123,942,395
JBrowse link
G TCF7 transcription factor 7 acts_upstream_of_or_within ISO (PMID:9462507) MGI PMID:9462507 NCBI chr23:36,919,648...36,953,088
Ensembl chr23:36,919,745...36,951,192
JBrowse link
alpha-beta T cell lineage commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RHOA ras homolog family member A involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:10,757,381...10,809,257
Ensembl chr22:10,757,337...10,772,704
JBrowse link
B cell affinity maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BTK Bruton tyrosine kinase acts_upstream_of_or_within ISO (PMID:7680896) MGI PMID:7680896 NCBI chr  X:89,690,569...89,727,420 JBrowse link
G BTK Bruton tyrosine kinase acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 Ensembl chr  X:89,690,671...89,711,218 JBrowse link
G MHC-DQB1 major histocompatibility complex, class II, DQ beta 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:39,406,811...39,413,626
Ensembl chr17:39,406,762...39,413,277
JBrowse link
G TRAF3IP2 TRAF3 interacting protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:62,272,893...62,320,096
Ensembl chr13:62,285,589...62,324,312
JBrowse link
B cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADAM17 ADAM metallopeptidase domain 17 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:98,092,093...98,157,657
Ensembl chr14:98,092,044...98,157,217
JBrowse link
G ADGRG3 adhesion G protein-coupled receptor G3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:43,598,868...43,619,611
Ensembl chr 5:43,599,185...43,620,471
JBrowse link
G AQP8 aquaporin 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:22,928,230...22,940,814
Ensembl chr 5:22,928,350...22,940,856
JBrowse link
G BCL11A BCL11 transcription factor A acts_upstream_of_or_within ISO (PMID:12717432) MGI PMID:12717432 NCBI chr14:46,453,102...46,553,802 JBrowse link
G BCL2 BCL2 apoptosis regulator acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr18:16,440,560...16,643,187
Ensembl chr18:16,441,733...16,637,895
JBrowse link
G BCL6 BCL6 transcription repressor acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr15:81,997,659...82,022,059
Ensembl chr15:81,998,545...82,009,946
JBrowse link
G CARD11 caspase recruitment domain family member 11 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 Ensembl chr28:18,675,524...18,715,388 JBrowse link
G CD40LG CD40 ligand acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr  X:111,655,301...111,667,602
Ensembl chr  X:111,655,397...111,666,639
JBrowse link
G CD79A CD79a molecule involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr 6:36,078,057...36,089,367 JBrowse link
G CD79B CD79b molecule involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr16:57,339,492...57,343,085
Ensembl chr16:57,339,457...57,343,358
JBrowse link
G CDH17 cadherin 17 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:89,101,788...89,179,353
Ensembl chr 8:89,101,744...89,179,251
JBrowse link
G CEBPG CCAAT enhancer binding protein gamma involved_in ISO (PMID:1431100) UniProt PMID:1431100 NCBI chr 6:28,415,448...28,424,463 JBrowse link
G CEBPG CCAAT enhancer binding protein gamma involved_in IEA Ensembl GO_REF:0000107 Ensembl chr 6:28,421,000...28,421,452 JBrowse link
G CLCF1 cardiotrophin like cytokine factor 1 acts_upstream_of_or_within ISO (PMID:10500198) MGI PMID:10500198 NCBI chr 1:6,890,751...6,900,370 JBrowse link
G CLCF1 cardiotrophin like cytokine factor 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 Ensembl chr 1:6,896,591...6,899,396 JBrowse link
G CR2 complement C3d receptor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr25:21,914,690...21,954,244
Ensembl chr25:21,919,393...21,953,659
JBrowse link
G DCAF1 DDB1 and CUL4 associated factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:12,736,784...12,843,762
Ensembl chr22:12,739,665...12,823,363
JBrowse link
G DCLRE1C DNA cross-link repair 1C acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 9:14,929,221...14,974,791
Ensembl chr 9:14,929,317...14,965,443
JBrowse link
G DNAJB9 DnaJ heat shock protein family (Hsp40) member B9 involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:77,477,177...77,482,190
Ensembl chr21:77,479,112...77,482,571
JBrowse link
G EP300 E1A binding protein p300 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr19:23,634,132...23,726,095
Ensembl chr19:23,634,571...23,724,979
JBrowse link
G EZH2 enhancer of zeste 2 polycomb repressive complex 2 subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:117,380,518...117,515,224
Ensembl chr21:117,380,361...117,421,573
JBrowse link
G FLT3 fms related receptor tyrosine kinase 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 3:7,117,579...7,222,600
Ensembl chr 3:7,116,947...7,222,849
JBrowse link
G FLT3LG fms related receptor tyrosine kinase 3 ligand involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:42,653,820...42,665,017
Ensembl chr 6:42,654,412...42,660,458
JBrowse link
G FNIP1 folliculin interacting protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr23:34,443,171...34,637,797
Ensembl chr23:34,480,901...34,637,662
JBrowse link
G FOSL2 FOS like 2, AP-1 transcription factor subunit acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr14:79,201,128...79,222,363
Ensembl chr14:79,201,649...79,222,373
JBrowse link
G FZD9 frizzled class receptor 9 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr28:9,621,434...9,623,769
Ensembl chr28:9,621,770...9,623,545
JBrowse link
G GIMAP1 GTPase, IMAP family member 1 acts_upstream_of_or_within ISO (PMID:20194894) MGI PMID:20194894 NCBI chr21:118,899,330...118,904,086
Ensembl chr21:118,899,352...118,904,277
JBrowse link
G GON4L gon-4 like acts_upstream_of_or_within ISO (PMID:20530203) MGI PMID:20530203 NCBI chr20:8,021,625...8,230,165
Ensembl chr20:8,025,074...8,127,097
JBrowse link
G GPS2 G protein pathway suppressor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:6,690,831...6,694,245
Ensembl chr16:6,686,667...6,693,804
JBrowse link
G HHEX hematopoietically expressed homeobox acts_upstream_of_or_within
involved_in
ISO (PMID:12522149) MGI
BHF-UCL
PMID:12522149 NCBI chr 9:85,957,684...85,963,414
Ensembl chr 9:85,957,779...85,963,404
JBrowse link
G HMGA1 high mobility group AT-hook 1 acts_upstream_of_or_within ISO (PMID:32341372) MGI PMID:32341372 NCBI chr17:37,848,110...37,857,835
Ensembl chr17:37,849,412...37,853,880
JBrowse link
G ID2 inhibitor of DNA binding 2 acts_upstream_of ISO (PMID:18523151) MGI PMID:18523151 NCBI chr14:98,962,001...98,964,486 JBrowse link
G ID2 inhibitor of DNA binding 2 acts_upstream_of IEA Ensembl GO_REF:0000107 Ensembl chr14:98,961,546...98,964,384 JBrowse link
G IKZF1 IKAROS family zinc finger 1 acts_upstream_of_or_within ISO (PMID:7923373)
(PMID:23071339)
MGI PMID:7923373 PMID:23071339 NCBI chr21:8,398,902...8,500,431
Ensembl chr21:8,402,719...8,484,723
JBrowse link
G IKZF3 IKAROS family zinc finger 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:66,302,107...66,399,152
Ensembl chr16:66,303,117...66,397,765
JBrowse link
G IL2RG interleukin 2 receptor subunit gamma acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr  X:60,905,011...60,915,723
Ensembl chr  X:60,905,343...60,909,149
JBrowse link
G IL9 interleukin 9 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr23:38,641,228...38,645,810
Ensembl chr23:38,641,741...38,645,276
JBrowse link
G IL9R interleukin 9 receptor acts_upstream_of_or_within ISO (PMID:30082831) MGI PMID:30082831 NCBI chr  X:130,006,399...130,019,191
Ensembl chr  X:130,006,899...130,020,894
JBrowse link
G JAK3 Janus kinase 3 involved_in ISO (PMID:9498750) BHF-UCL PMID:9498750 NCBI chr 6:16,301,760...16,323,343
Ensembl chr 6:16,300,525...16,322,859
JBrowse link
G KIT KIT proto-oncogene, receptor tyrosine kinase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 7:13,808,104...13,891,003
Ensembl chr 7:13,808,037...13,890,976
JBrowse link
G LOC103243413 signal transducer and activator of transcription 5B acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr16:63,997,486...64,070,392
Ensembl chr16:63,997,441...64,070,445
JBrowse link
G LOC103246958 caspase recruitment domain-containing protein 11 acts_upstream_of_or_within ISO (PMID:12818158) MGI PMID:12818158 NCBI chr28:18,657,941...18,714,202 JBrowse link
G LOC103247334 ADP/ATP translocase 2 involved_in ISO (PMID:25613378) UniProt PMID:25613378
G LYL1 LYL1 basic helix-loop-helix family member involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:11,778,634...11,785,474
Ensembl chr 6:11,780,766...11,782,618
JBrowse link
G MS4A1 membrane spanning 4-domains A1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:13,343,647...13,358,639
Ensembl chr 1:13,345,253...13,358,547
JBrowse link
G MSH2 mutS homolog 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr14:59,730,101...59,802,857
Ensembl chr14:59,729,789...59,802,819
JBrowse link
G MUC19 mucin 19, oligomeric acts_upstream_of_or_within ISO (PMID:37475871) MGI PMID:37475871 NCBI chr11:36,679,954...36,829,714 JBrowse link
G MYB MYB proto-oncogene, transcription factor acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr13:38,203,923...38,242,148
Ensembl chr13:38,203,731...38,241,864
JBrowse link
G NFAM1 NFAT activating protein with ITAM motif 1 involved_in ISO (PMID:15143214) HGNC-UCL PMID:15143214 NCBI chr19:24,913,474...24,964,803
Ensembl chr19:24,918,238...24,964,033
JBrowse link
G NHEJ1 non-homologous end joining factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:104,981,313...105,071,828
Ensembl chr10:104,982,380...105,068,999
JBrowse link
G NKX2-3 NK2 homeobox 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 9:92,590,342...92,594,749
Ensembl chr 9:92,591,375...92,594,842
JBrowse link
G NTRK1 neurotrophic receptor tyrosine kinase 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr20:6,987,903...7,027,381
Ensembl chr20:6,987,905...7,008,670
JBrowse link
G ONECUT1 one cut homeobox 1 acts_upstream_of_or_within ISO (PMID:12874218) MGI PMID:12874218 NCBI chr26:30,609,392...30,645,996 JBrowse link
G ONECUT1 one cut homeobox 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 Ensembl chr26:30,610,161...30,643,380 JBrowse link
G PIK3R1 phosphoinositide-3-kinase regulatory subunit 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 4:64,321,296...64,406,188
Ensembl chr 4:64,321,078...64,406,519
JBrowse link
G PLCG2 phospholipase C gamma 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:67,209,268...67,394,865
Ensembl chr 5:67,215,459...67,398,990
JBrowse link
G POLM DNA polymerase mu acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr21:14,585,912...14,596,127
Ensembl chr21:14,586,164...14,599,248
JBrowse link
G POU1F1 POU class 1 homeobox 1 acts_upstream_of_or_within ISO (PMID:9300691) MGI PMID:9300691 NCBI chr22:89,649,971...89,668,675
Ensembl chr22:89,649,999...89,668,941
JBrowse link
G PTPN2 protein tyrosine phosphatase non-receptor type 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:71,302,082...71,400,201
Ensembl chr18:71,310,577...71,345,960
JBrowse link
G PTPRC protein tyrosine phosphatase receptor type C acts_upstream_of_or_within
involved_in
IEA
ISO
(PMID:15557316), (PMID:18249142) Ensembl
ARUK-UCL
PMID:15557316 PMID:18249142 GO_REF:0000107 NCBI chr25:30,655,014...30,777,367
Ensembl chr25:30,653,044...30,777,303
JBrowse link
G PTPRJ protein tyrosine phosphatase receptor type J involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:17,137,896...17,328,836
Ensembl chr 1:17,135,907...17,328,590
JBrowse link
G RABL3 RAB, member of RAS oncogene family like 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:60,095,013...60,133,189
Ensembl chr22:60,095,066...60,136,337
JBrowse link
G RAG1 recombination activating 1 involved_in
acts_upstream_of_or_within
IEA UniProt
Ensembl
GO_REF:0000104 GO_REF:0000107 NCBI chr 1:28,667,996...28,701,002 JBrowse link
G RAG2 recombination activating 2 acts_upstream_of_or_within
involved_in
IEA
ISO
(PMID:1547487), (PMID:1547488) Ensembl
UniProt
PMID:1547487 PMID:1547488 GO_REF:0000107 NCBI chr 1:28,645,175...28,653,823
Ensembl chr 1:28,649,930...28,651,513
JBrowse link
G RBPJ recombination signal binding protein for immunoglobulin kappa J region acts_upstream_of_or_within ISO (PMID:11967543) MGI PMID:11967543 NCBI chr27:23,911,084...24,023,856 JBrowse link
G RBPJ recombination signal binding protein for immunoglobulin kappa J region acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 Ensembl chr27:23,910,533...23,921,725 JBrowse link
G SLC39A7 solute carrier family 39 member 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:38,870,726...38,874,334
Ensembl chr17:38,870,609...38,873,909
JBrowse link
G SP3 Sp3 transcription factor acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr10:59,414,739...59,471,596
Ensembl chr10:59,416,152...59,470,456
JBrowse link
G STAT5A signal transducer and activator of transcription 5A acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr16:63,959,265...63,986,627
Ensembl chr16:63,960,515...63,985,026
JBrowse link
G SYK spleen associated tyrosine kinase acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr12:101,254,085...101,374,724
Ensembl chr12:101,260,061...101,349,856
JBrowse link
G TCIRG1 T cell immune regulator 1, ATPase H+ transporting V0 subunit a3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:6,484,469...6,497,008
Ensembl chr 1:6,484,474...6,494,719
JBrowse link
G TMIGD2 transmembrane and immunoglobulin domain containing 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:4,032,790...4,040,261
Ensembl chr 6:4,032,715...4,039,987
JBrowse link
G TNFSF13B TNF superfamily member 13b involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17581616) Ensembl
MGI
PMID:17581616 GO_REF:0000107 NCBI chr 3:86,637,988...86,675,774
Ensembl chr 3:86,638,302...86,675,772
JBrowse link
G TOP2B DNA topoisomerase II beta involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:70,266,267...70,332,079
Ensembl chr15:70,266,601...70,332,824
JBrowse link
G TPD52 tumor protein D52 involved_in ISO (PMID:15576473) UniProt PMID:15576473 NCBI chr 8:75,482,413...75,616,018 JBrowse link
G TPD52 tumor protein D52 involved_in IEA TreeGrafter GO_REF:0000118 Ensembl chr 8:75,453,588...75,525,372 JBrowse link
G TSHR thyroid stimulating hormone receptor acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr24:58,268,546...58,462,742
Ensembl chr24:58,384,224...58,460,432
JBrowse link
G YY1 YY1 transcription factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr24:78,199,172...78,243,081
Ensembl chr24:78,199,039...78,237,165
JBrowse link
G ZBTB1 zinc finger and BTB domain containing 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr24:41,712,721...41,738,853
Ensembl chr24:41,712,114...41,740,654
JBrowse link
G ZBTB7A zinc finger and BTB domain containing 7A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:3,802,171...3,824,552
Ensembl chr 6:3,801,046...3,812,884
JBrowse link
B cell lineage commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BCL2 BCL2 apoptosis regulator acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr18:16,440,560...16,643,187
Ensembl chr18:16,441,733...16,637,895
JBrowse link
G PRKDC protein kinase, DNA-activated, catalytic subunit acts_upstream_of_or_within ISO (PMID:8788039) MGI PMID:8788039 NCBI chr 8:43,915,226...44,119,547
Ensembl chr 8:43,914,636...44,119,541
JBrowse link
G RAG2 recombination activating 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:28,645,175...28,653,823
Ensembl chr 1:28,649,930...28,651,513
JBrowse link
G TCF3 transcription factor 3 involved_in ISO (PMID:15030778) UniProt PMID:15030778 NCBI chr 6:1,393,147...1,440,515
Ensembl chr 6:1,393,107...1,440,479
JBrowse link
G TP53 tumor protein p53 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr16:7,047,686...7,065,567
Ensembl chr16:7,045,146...7,066,223
JBrowse link
B cell negative selection term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BAK1 BCL2 antagonist/killer 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr17:38,492,776...38,502,534
Ensembl chr17:38,492,858...38,501,281
JBrowse link
G BAX BCL2 associated X, apoptosis regulator acts_upstream_of_or_within ISO (PMID:16055554) MGI PMID:16055554 NCBI chr 6:42,186,028...42,193,105 JBrowse link
G BAX BCL2 associated X, apoptosis regulator acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 Ensembl chr 6:42,186,238...42,194,115 JBrowse link
B-1 B cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CD19 CD19 molecule involved_in ISO (PMID:7543183) UniProt PMID:7543183 NCBI chr 5:26,140,703...26,145,447 JBrowse link
G MALT1 MALT1 paracaspase acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr18:20,984,985...21,064,198
Ensembl chr18:20,985,819...21,054,554
JBrowse link
B-1 B cell lineage commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC103223747 SLAM family member 8 involved_in ISO (PMID:11313408) UniProt PMID:11313408 NCBI chr20:4,114,403...4,127,122
Ensembl chr20:4,116,630...4,124,988
JBrowse link
B-1a B cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CMTM7 CKLF like MARVEL transmembrane domain containing 7 acts_upstream_of_or_within ISO (PMID:24080084) MGI PMID:24080084 NCBI chr15:76,896,216...76,960,117 JBrowse link
G CMTM7 CKLF like MARVEL transmembrane domain containing 7 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 Ensembl chr15:76,896,553...76,959,017 JBrowse link
G DPP4 dipeptidyl peptidase 4 ISO RGD PMID:19327106 RGD:41408336 NCBI chr10:47,396,605...47,481,478
Ensembl chr10:47,394,093...47,480,893
JBrowse link
G NFATC1 nuclear factor of activated T cells 1 acts_upstream_of_or_within ISO (PMID:14595020) MGI PMID:14595020 NCBI chr18:690,313...815,804
Ensembl chr18:689,671...811,100
JBrowse link
G PLCL2 phospholipase C like 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr15:61,745,338...61,940,176
Ensembl chr15:61,745,163...61,942,655
JBrowse link
beta selection term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC103241092 tyrosine-protein kinase ZAP-70 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr14:1,403,294...1,430,205
Ensembl chr14:1,404,325...1,431,015
JBrowse link
G RHOA ras homolog family member A involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:10,757,381...10,809,257
Ensembl chr22:10,757,337...10,772,704
JBrowse link
G SYK spleen associated tyrosine kinase acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr12:101,254,085...101,374,724
Ensembl chr12:101,260,061...101,349,856
JBrowse link
CD4-positive or CD8-positive, alpha-beta T cell lineage commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BRAF B-Raf proto-oncogene, serine/threonine kinase acts_upstream_of_or_within ISO (PMID:18228248) MGI PMID:18228248 NCBI chr21:109,495,525...109,690,261 JBrowse link
G BRAF B-Raf proto-oncogene, serine/threonine kinase acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 Ensembl chr21:109,545,491...109,690,195 JBrowse link
G CYLD CYLD lysine 63 deubiquitinase acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 5:36,541,022...36,600,874
Ensembl chr 5:36,541,764...36,595,417
JBrowse link
G SHH sonic hedgehog signaling molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:123,929,937...123,942,451
Ensembl chr21:123,932,900...123,942,395
JBrowse link
CD4-positive, alpha-beta T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARMC5 armadillo repeat containing 5 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 5:28,159,796...28,167,575
Ensembl chr 5:28,160,617...28,167,672
JBrowse link
G BRAF B-Raf proto-oncogene, serine/threonine kinase acts_upstream_of_or_within ISO (PMID:23334952) MGI PMID:23334952 NCBI chr21:109,495,525...109,690,261 JBrowse link
G BRAF B-Raf proto-oncogene, serine/threonine kinase acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 Ensembl chr21:109,545,491...109,690,195 JBrowse link
G CD83 CD83 molecule acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr17:58,022,817...58,052,041
Ensembl chr17:58,022,593...58,041,983
JBrowse link
G FOXP3 forkhead box P3 acts_upstream_of ISO (PMID:17028180) MGI PMID:17028180 NCBI chr  X:46,349,890...46,365,133 JBrowse link
G FOXP3 forkhead box P3 acts_upstream_of IEA Ensembl GO_REF:0000107 Ensembl chr  X:46,346,754...46,356,928 JBrowse link
G GIMAP1 GTPase, IMAP family member 1 acts_upstream_of_or_within ISO (PMID:20194894) MGI PMID:20194894 NCBI chr21:118,899,330...118,904,086
Ensembl chr21:118,899,352...118,904,277
JBrowse link
G NKX2-3 NK2 homeobox 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 9:92,590,342...92,594,749
Ensembl chr 9:92,591,375...92,594,842
JBrowse link
G PAX1 paired box 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 2:50,706,029...50,722,634 JBrowse link
G RSAD2 radical S-adenosyl methionine domain containing 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:100,778,801...100,804,205
Ensembl chr14:100,778,302...100,798,044
JBrowse link
G SASH3 SAM and SH3 domain containing 3 acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr  X:105,057,782...105,072,994
Ensembl chr  X:105,057,570...105,073,354
JBrowse link
G SATB1 SATB homeobox 1 acts_upstream_of_or_within ISO (PMID:10716941) MGI PMID:10716941 NCBI chr15:63,163,989...63,263,122
Ensembl chr15:63,170,243...63,263,149
JBrowse link
CD4-positive, alpha-beta T cell lineage commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CTSL cathepsin L involved_in ISO (PMID:9545226) UniProt PMID:9545226 NCBI chr12:98,347,770...98,353,426
Ensembl chr12:98,347,800...98,353,467
JBrowse link
G TOX thymocyte selection associated high mobility group box involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:54,777,490...55,086,819
Ensembl chr 8:54,776,015...54,927,091
JBrowse link
CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FOXP3 forkhead box P3 involved_in
acts_upstream_of
ISO (PMID:22079196)
(PMID:16301745), (PMID:18573908)
(PMID:16275384)
CACAO
MGI
PMID:16275384 PMID:16301745 PMID:18573908 PMID:22079196 NCBI chr  X:46,349,890...46,365,133 JBrowse link
G FOXP3 forkhead box P3 acts_upstream_of IEA Ensembl GO_REF:0000107 Ensembl chr  X:46,346,754...46,356,928 JBrowse link
G FUT7 fucosyltransferase 7 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr12:1,158,353...1,160,913 JBrowse link
G IL2RG interleukin 2 receptor subunit gamma acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr  X:60,905,011...60,915,723
Ensembl chr  X:60,905,343...60,909,149
JBrowse link
G NCOR1 nuclear receptor corepressor 1 acts_upstream_of_or_within ISO (PMID:11030619) MGI PMID:11030619 NCBI chr16:15,442,315...15,629,411
Ensembl chr16:15,462,640...15,628,512
JBrowse link
G PLA2G2D phospholipase A2 group IID acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr20:112,434,208...112,441,215
Ensembl chr20:112,434,276...112,441,249
JBrowse link
CD4-positive, CD25-positive, alpha-beta regulatory T cell lineage commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TOX thymocyte selection associated high mobility group box involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:54,777,490...55,086,819
Ensembl chr 8:54,776,015...54,927,091
JBrowse link
CD8-positive, alpha-beta intraepithelial T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GPR18 G protein-coupled receptor 18 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 3:77,911,752...77,919,717
Ensembl chr 3:77,911,915...77,912,910
JBrowse link
CD8-positive, alpha-beta T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GIMAP1 GTPase, IMAP family member 1 acts_upstream_of_or_within ISO (PMID:20194894) MGI PMID:20194894 NCBI chr21:118,899,330...118,904,086
Ensembl chr21:118,899,352...118,904,277
JBrowse link
G IRF1 interferon regulatory factor 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr23:35,309,058...35,317,765
Ensembl chr23:35,307,772...35,316,763
JBrowse link
G OTUD5 OTU deubiquitinase 5 acts_upstream_of_or_within ISO (PMID:25470037) MGI PMID:25470037 NCBI chr  X:46,041,348...46,077,195 JBrowse link
G PAX1 paired box 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 2:50,706,029...50,722,634 JBrowse link
G PSMB11 proteasome subunit beta 11 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr29:23,410,583...23,413,099
Ensembl chr29:23,411,557...23,412,459
JBrowse link
G SATB1 SATB homeobox 1 acts_upstream_of_or_within ISO (PMID:10716941), (PMID:15814699) MGI PMID:10716941 PMID:15814699 NCBI chr15:63,163,989...63,263,122
Ensembl chr15:63,170,243...63,263,149
JBrowse link
G TNFSF8 TNF superfamily member 8 involved_in
acts_upstream_of_or_within
IEA TreeGrafter
Ensembl
GO_REF:0000107 GO_REF:0000118 NCBI chr12:24,646,797...24,684,341
Ensembl chr12:24,647,412...24,678,466
JBrowse link
CD8-positive, alpha-beta T cell differentiation involved in immune response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EOMES eomesodermin involved_in ISO (PMID:17566017)
(PMID:14605368)
UniProt PMID:14605368 PMID:17566017 NCBI chr15:72,257,626...72,264,563 JBrowse link
G EOMES eomesodermin involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 Ensembl chr15:72,257,615...72,263,264 JBrowse link
G IFNG interferon gamma acts_upstream_of_or_within ISO (PMID:17277142) MGI PMID:17277142 NCBI chr11:63,785,493...63,791,071
Ensembl chr11:63,786,041...63,790,473
JBrowse link
CD8-positive, alpha-beta T cell lineage commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BCL2 BCL2 apoptosis regulator acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr18:16,440,560...16,643,187
Ensembl chr18:16,441,733...16,637,895
JBrowse link
G TOX thymocyte selection associated high mobility group box involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:54,777,490...55,086,819
Ensembl chr 8:54,776,015...54,927,091
JBrowse link
CD8-positive, gamma-delta intraepithelial T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CCR9 C-C motif chemokine receptor 9 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr22:7,354,139...7,375,280
Ensembl chr22:7,354,489...7,377,676
JBrowse link
G GPR18 G protein-coupled receptor 18 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 3:77,911,752...77,919,717
Ensembl chr 3:77,911,915...77,912,910
JBrowse link
G KLRC1 killer cell lectin like receptor C1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:10,286,280...10,294,853
Ensembl chr11:10,286,787...10,293,585
JBrowse link
cytotoxic T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CD8A CD8 subunit alpha acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:1673361) MGI
TreeGrafter
PMID:1673361 GO_REF:0000118 NCBI chr14:18,878,013...18,885,183
Ensembl chr14:18,878,622...18,883,885
JBrowse link
DN2 thymocyte differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CCR6 C-C motif chemokine receptor 6 involved_in ISO (PMID:24638065) UniProt PMID:24638065 NCBI chr13:94,865,480...94,894,331
Ensembl chr13:94,865,936...94,894,315
JBrowse link
G LIG4 DNA ligase 4 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 3:86,576,200...86,587,097
Ensembl chr 3:86,577,304...86,580,039
JBrowse link
G RAG2 recombination activating 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:28,645,175...28,653,823
Ensembl chr 1:28,649,930...28,651,513
JBrowse link
G XRCC4 X-ray repair cross complementing 4 acts_upstream_of_or_within ISO (PMID:9875844) MGI PMID:9875844 NCBI chr 4:77,182,569...77,468,786
Ensembl chr 4:77,182,793...77,468,775
JBrowse link
DN3 thymocyte differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CCR6 C-C motif chemokine receptor 6 involved_in ISO (PMID:24638065) UniProt PMID:24638065 NCBI chr13:94,865,480...94,894,331
Ensembl chr13:94,865,936...94,894,315
JBrowse link
DN4 thymocyte differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABL1 ABL proto-oncogene 1, non-receptor tyrosine kinase acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr12:7,258,932...7,435,658
Ensembl chr12:7,256,648...7,312,734
JBrowse link
G ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase acts_upstream_of_or_within ISO (PMID:18025176) MGI PMID:18025176 NCBI chr25:50,106,621...50,244,002
Ensembl chr25:50,216,483...50,241,621
JBrowse link
G BLM BLM RecQ like helicase acts_upstream_of_or_within ISO (PMID:17210642) MGI PMID:17210642 NCBI chr29:9,046,485...9,152,320
Ensembl chr29:9,045,373...9,152,254
JBrowse link
G NFATC3 nuclear factor of activated T cells 3 involved_in ISO (PMID:17579027) UniProt PMID:17579027 NCBI chr 5:59,193,139...59,346,361 JBrowse link
extrathymic T cell selection term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G IL15 interleukin 15 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 7:88,548,773...88,644,977
Ensembl chr 7:88,548,671...88,645,488
JBrowse link
G LOC103221987 butyrophilin subfamily 3 member A3 involved_in ISO (PMID:27641500) MGI PMID:27641500 NCBI chr17:45,874,447...45,887,984
Ensembl chr17:45,876,877...45,884,925
JBrowse link
follicular B cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G IRF8 interferon regulatory factor 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:71,301,878...71,325,622
Ensembl chr 5:71,302,233...71,325,613
JBrowse link
G MUC19 mucin 19, oligomeric acts_upstream_of_or_within ISO (PMID:37475871) MGI PMID:37475871 NCBI chr11:36,679,954...36,829,714 JBrowse link
G PLCG2 phospholipase C gamma 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 5:67,209,268...67,394,865
Ensembl chr 5:67,215,459...67,398,990
JBrowse link
G SPI1 Spi-1 proto-oncogene involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:17,935,037...17,961,638
Ensembl chr 1:17,935,922...17,961,717
JBrowse link
gamma-delta T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G JAG2 jagged canonical Notch ligand 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr24:83,050,412...83,081,982
Ensembl chr24:83,051,368...83,076,820
JBrowse link
G LCK LCK proto-oncogene, Src family tyrosine kinase acts_upstream_of ISO (PMID:7807014) MGI PMID:7807014 NCBI chr20:100,582,718...100,618,041 JBrowse link
G LCK LCK proto-oncogene, Src family tyrosine kinase acts_upstream_of IEA Ensembl GO_REF:0000107 Ensembl chr20:100,583,452...100,618,015 JBrowse link
G LOC103243413 signal transducer and activator of transcription 5B acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr16:63,997,486...64,070,392
Ensembl chr16:63,997,441...64,070,445
JBrowse link
G PTPRC protein tyrosine phosphatase receptor type C acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr25:30,655,014...30,777,367
Ensembl chr25:30,653,044...30,777,303
JBrowse link
G SOX13 SRY-box transcription factor 13 involved_in IEA Ensembl GO_REF:0000107 NCBI chr25:25,220,341...25,275,981
Ensembl chr25:25,221,945...25,235,449
JBrowse link
G STAT5A signal transducer and activator of transcription 5A acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr16:63,959,265...63,986,627
Ensembl chr16:63,960,515...63,985,026
JBrowse link
G SYK spleen associated tyrosine kinase acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr12:101,254,085...101,374,724
Ensembl chr12:101,260,061...101,349,856
JBrowse link
G TCF7 transcription factor 7 involved_in ISO (PMID:30413363) UniProt PMID:30413363 NCBI chr23:36,919,648...36,953,088
Ensembl chr23:36,919,745...36,951,192
JBrowse link
germinal center B cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADA adenosine deaminase acts_upstream_of_or_within ISO (PMID:14607964) MGI PMID:14607964 NCBI chr 2:19,167,209...19,200,233 JBrowse link
G CDH17 cadherin 17 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:89,101,788...89,179,353
Ensembl chr 8:89,101,744...89,179,251
JBrowse link
G IL21 interleukin 21 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:69,859,793...69,872,237
Ensembl chr 7:69,863,535...69,872,025
JBrowse link
G IL6 interleukin 6 involved_in ISO (PMID:23045607) UniProt PMID:23045607 NCBI chr21:35,577,513...35,582,385
Ensembl chr21:35,577,939...35,582,237
JBrowse link
G IRF8 interferon regulatory factor 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:71,301,878...71,325,622
Ensembl chr 5:71,302,233...71,325,613
JBrowse link
G ITFG2 integrin alpha FG-GAP repeat containing 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr11:2,877,864...2,891,223
Ensembl chr11:2,877,997...2,890,477
JBrowse link
G PHF14 PHD finger protein 14 involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:47,013,239...47,213,030
Ensembl chr21:47,013,251...47,212,968
JBrowse link
G POU2AF1 POU class 2 homeobox associating factor 1 involved_in ISO (PMID:23045607) UniProt PMID:23045607 NCBI chr 1:102,692,305...102,719,066 JBrowse link
G POU2AF1 POU class 2 homeobox associating factor 1 involved_in IEA Ensembl GO_REF:0000107 Ensembl chr 1:102,691,003...102,696,024 JBrowse link
G SPI1 Spi-1 proto-oncogene involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:17,935,037...17,961,638
Ensembl chr 1:17,935,922...17,961,717
JBrowse link
immature B cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FNIP1 folliculin interacting protein 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr23:34,443,171...34,637,797
Ensembl chr23:34,480,901...34,637,662
JBrowse link
G IRF2BP2 interferon regulatory factor 2 binding protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr25:71,774,447...71,779,759
Ensembl chr25:71,773,588...71,779,835
JBrowse link
G KIT KIT proto-oncogene, receptor tyrosine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:13,808,104...13,891,003
Ensembl chr 7:13,808,037...13,890,976
JBrowse link
G LOC103235079 transcription factor Spi-B involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:43,446,466...43,490,377
Ensembl chr 6:43,460,747...43,480,112
Ensembl chr 6:43,460,747...43,480,112
JBrowse link
G PRKDC protein kinase, DNA-activated, catalytic subunit acts_upstream_of_or_within ISO (PMID:9768755) MGI PMID:9768755 NCBI chr 8:43,915,226...44,119,547
Ensembl chr 8:43,914,636...44,119,541
JBrowse link
G SPI1 Spi-1 proto-oncogene involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:17,935,037...17,961,638
Ensembl chr 1:17,935,922...17,961,717
JBrowse link
G SYVN1 synoviolin 1 involved_in ISO (PMID:29907570) UniProt PMID:29907570 NCBI chr 1:9,093,657...9,101,245
Ensembl chr 1:9,094,592...9,100,213
JBrowse link
immature T cell proliferation in thymus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BLM BLM RecQ like helicase acts_upstream_of ISO (PMID:17210642) MGI PMID:17210642 NCBI chr29:9,046,485...9,152,320
Ensembl chr29:9,045,373...9,152,254
JBrowse link
G ERBB2 erb-b2 receptor tyrosine kinase 2 acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr16:66,435,488...66,464,993
Ensembl chr16:66,434,251...66,464,952
JBrowse link
G FOXP3 forkhead box P3 acts_upstream_of ISO (PMID:16230479) MGI PMID:16230479 NCBI chr  X:46,349,890...46,365,133 JBrowse link
G FOXP3 forkhead box P3 acts_upstream_of IEA Ensembl GO_REF:0000107 Ensembl chr  X:46,346,754...46,356,928 JBrowse link
G IFNAR2 interferon alpha and beta receptor subunit 2 acts_upstream_of_or_within ISO (PMID:11154225) MGI PMID:11154225 NCBI chr 2:58,920,237...58,954,809
Ensembl chr 2:58,918,433...58,954,790
JBrowse link
G LOC103233812 C-type lectin domain family 4 member G acts_upstream_of ISO (PMID:23487419) MGI PMID:23487419 NCBI chr 6:7,206,303...7,211,213
Ensembl chr 6:7,206,712...7,209,431
JBrowse link
G RIPK2 receptor interacting serine/threonine kinase 2 acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr 8:84,843,391...84,881,087
Ensembl chr 8:84,843,471...84,881,303
JBrowse link
G WNT4 Wnt family member 4 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr20:110,517,391...110,543,802
Ensembl chr20:110,517,564...110,541,203
JBrowse link
marginal zone B cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADAM10 ADAM metallopeptidase domain 10 involved_in IEA Ensembl GO_REF:0000107 NCBI chr26:24,768,827...24,921,169
Ensembl chr26:24,768,915...24,919,009
JBrowse link
G BCL3 BCL3 transcription coactivator acts_upstream_of_or_within ISO (PMID:9009202) MGI PMID:9009202 NCBI chr 6:38,228,137...38,243,767 JBrowse link
G BCL3 BCL3 transcription coactivator acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 Ensembl chr 6:38,229,459...38,244,150 JBrowse link
G CDH17 cadherin 17 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:89,101,788...89,179,353
Ensembl chr 8:89,101,744...89,179,251
JBrowse link
G DLL1 delta like canonical Notch ligand 1 involved_in ISO (PMID:15146182), (PMID:19217325) UniProt PMID:15146182 PMID:19217325 NCBI chr13:97,928,480...97,936,594
Ensembl chr13:97,928,634...97,936,589
JBrowse link
G DOCK10 dedicator of cytokinesis 10 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:110,718,256...111,001,599
Ensembl chr10:110,718,258...110,904,005
JBrowse link
G DOCK11 dedicator of cytokinesis 11 involved_in IEA TreeGrafter GO_REF:0000118
G LFNG LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase involved_in ISO (PMID:19217325) UniProt PMID:19217325 NCBI chr28:19,084,527...19,092,305 JBrowse link
G LFNG LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase involved_in IEA Ensembl GO_REF:0000107 Ensembl chr28:19,082,864...19,091,900 JBrowse link
G MFNG MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:20,177,108...20,195,406
Ensembl chr19:20,176,878...20,194,915
JBrowse link
G NOTCH2 notch receptor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:13,712,140...13,871,777
Ensembl chr20:13,712,292...13,871,784
JBrowse link
G PTK2B protein tyrosine kinase 2 beta involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:25,437,680...25,571,594
Ensembl chr 8:25,437,564...25,571,782
JBrowse link
G TAOK3 TAO kinase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:113,485,871...113,717,213
Ensembl chr11:113,484,330...113,704,271
JBrowse link
mature B cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G IL2RG interleukin 2 receptor subunit gamma acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr  X:60,905,011...60,915,723
Ensembl chr  X:60,905,343...60,909,149
JBrowse link
G POU2F2 POU class 2 homeobox 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 6:36,292,252...36,382,354
Ensembl chr 6:36,295,275...36,336,013
JBrowse link
mature B cell differentiation involved in immune response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CUNH17orf99 chromosome unknown C17orf99 homolog involved_in ISO (PMID:28978694) UniProt PMID:28978694 NCBI chr16:70,172,850...70,178,358 JBrowse link
G GPR183 G protein-coupled receptor 183 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:77,952,689...77,966,317
Ensembl chr 3:77,953,212...77,954,297
JBrowse link
G RAG2 recombination activating 2 ISO RGD PMID:30206106 RGD:38508903 NCBI chr 1:28,645,175...28,653,823
Ensembl chr 1:28,649,930...28,651,513
JBrowse link
memory B cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ST3GAL1 ST3 beta-galactoside alpha-2,3-sialyltransferase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:127,885,018...127,929,865
Ensembl chr 8:127,885,031...127,906,059
JBrowse link
memory T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TSC1 TSC complex subunit 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr12:5,195,604...5,249,042
Ensembl chr12:5,195,675...5,244,157
JBrowse link
natural killer cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AXL AXL receptor tyrosine kinase involved_in
acts_upstream_of_or_within
IEA TreeGrafter
Ensembl
GO_REF:0000107 GO_REF:0000118 NCBI chr 6:35,537,718...35,580,143
Ensembl chr 6:35,537,773...35,580,716
JBrowse link
G FLT3LG fms related receptor tyrosine kinase 3 ligand acts_upstream_of
involved_in
ISO (PMID:14607906)
(PMID:38701783)
MGI
UniProt
PMID:14607906 PMID:38701783 NCBI chr 6:42,653,820...42,665,017
Ensembl chr 6:42,654,412...42,660,458
JBrowse link
G ID2 inhibitor of DNA binding 2 acts_upstream_of_or_within ISO (PMID:17452521) MGI PMID:17452521 NCBI chr14:98,962,001...98,964,486 JBrowse link
G ID2 inhibitor of DNA binding 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 Ensembl chr14:98,961,546...98,964,384 JBrowse link
G IKZF1 IKAROS family zinc finger 1 acts_upstream_of_or_within ISO (PMID:7923373) MGI PMID:7923373 NCBI chr21:8,398,902...8,500,431
Ensembl chr21:8,402,719...8,484,723
JBrowse link
G IL11RA interleukin 11 receptor subunit alpha acts_upstream_of_or_within ISO (PMID:15499555) MGI PMID:15499555 NCBI chr12:45,959,370...45,970,563
Ensembl chr12:45,955,863...45,969,310
JBrowse link
G IL15 interleukin 15 acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr 7:88,548,773...88,644,977
Ensembl chr 7:88,548,671...88,645,488
JBrowse link
G IL15RA interleukin 15 receptor subunit alpha acts_upstream_of ISO (PMID:14607906) MGI PMID:14607906 NCBI chr 9:6,061,475...6,096,370
Ensembl chr 9:6,061,197...6,096,250
JBrowse link
G IL21 interleukin 21 acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr 7:69,859,793...69,872,237
Ensembl chr 7:69,863,535...69,872,025
JBrowse link
G KAT7 lysine acetyltransferase 7 involved_in ISO (PMID:27733580) UniProt PMID:27733580 NCBI chr16:43,508,888...43,548,411
Ensembl chr16:43,510,483...43,548,517
JBrowse link
G KCTD9 potassium channel tetramerization domain containing 9 acts_upstream_of_or_within ISO (PMID:31024568) MGI PMID:31024568 NCBI chr 8:23,552,420...23,581,969
Ensembl chr 8:23,554,235...23,581,950
JBrowse link
G LOC103243413 signal transducer and activator of transcription 5B acts_upstream_of_or_within ISO
IEA
(PMID:10072077) MGI
Ensembl
PMID:10072077 GO_REF:0000107 NCBI chr16:63,997,486...64,070,392
Ensembl chr16:63,997,441...64,070,445
JBrowse link
G MERTK MER proto-oncogene, tyrosine kinase acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr14:14,971,858...15,100,736
Ensembl chr14:15,001,471...15,101,025
JBrowse link
G NFIL3 nuclear factor, interleukin 3 regulated involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:101,845,294...101,860,844
Ensembl chr12:101,845,592...101,846,980
JBrowse link
G PBX1 PBX homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr25:63,990,553...64,317,901
Ensembl chr25:63,989,612...64,084,673
JBrowse link
G PTPRC protein tyrosine phosphatase receptor type C involved_in IEA Ensembl GO_REF:0000107 NCBI chr25:30,655,014...30,777,367
Ensembl chr25:30,653,044...30,777,303
JBrowse link
G RABL3 RAB, member of RAS oncogene family like 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:60,095,013...60,133,189
Ensembl chr22:60,095,066...60,136,337
JBrowse link
G SLAMF1 signaling lymphocytic activation molecule family member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:3,282,862...3,320,943
Ensembl chr20:3,282,774...3,322,926
JBrowse link
G SLAMF6 SLAM family member 6 involved_in ISO (PMID:18031695) UniProt PMID:18031695 NCBI chr20:3,426,868...3,465,553
Ensembl chr20:3,453,370...3,463,901
JBrowse link
G SP3 Sp3 transcription factor acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr10:59,414,739...59,471,596
Ensembl chr10:59,416,152...59,470,456
JBrowse link
G STAT5A signal transducer and activator of transcription 5A acts_upstream_of_or_within ISO
IEA
(PMID:10072077) MGI
Ensembl
PMID:10072077 GO_REF:0000107 NCBI chr16:63,959,265...63,986,627
Ensembl chr16:63,960,515...63,985,026
JBrowse link
G TCF3 transcription factor 3 acts_upstream_of_or_within ISO (PMID:17452521) MGI PMID:17452521 NCBI chr 6:1,393,147...1,440,515
Ensembl chr 6:1,393,107...1,440,479
JBrowse link
G TOX thymocyte selection associated high mobility group box involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:54,777,490...55,086,819
Ensembl chr 8:54,776,015...54,927,091
JBrowse link
G TUSC2 tumor suppressor 2, mitochondrial calcium regulator acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr22:11,711,487...11,715,095
Ensembl chr22:11,711,386...11,715,057
JBrowse link
G TYRO3 TYRO3 protein tyrosine kinase acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr26:41,429,667...41,449,130
Ensembl chr26:41,429,556...41,449,175
JBrowse link
G ZNF683 zinc finger protein 683 acts_upstream_of_or_within ISO (PMID:22885984) MGI PMID:22885984 NCBI chr20:106,336,441...106,411,217 JBrowse link
negative regulation of alpha-beta T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GLI3 GLI family zinc finger 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:16,386,700...16,665,648
Ensembl chr21:16,549,789...16,662,238
JBrowse link
G IHH Indian hedgehog signaling molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:104,960,296...104,966,596
Ensembl chr10:104,960,120...104,966,585
JBrowse link
G SHH sonic hedgehog signaling molecule acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr21:123,929,937...123,942,451
Ensembl chr21:123,932,900...123,942,395
JBrowse link
negative regulation of B cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FLT3 fms related receptor tyrosine kinase 3 acts_upstream_of_or_within ISO (PMID:16618805) MGI PMID:16618805 NCBI chr 3:7,117,579...7,222,600
Ensembl chr 3:7,116,947...7,222,849
JBrowse link
G HMGB3 high mobility group box 3 acts_upstream_of_or_within ISO (PMID:12714519) MGI PMID:12714519 NCBI chr  X:125,568,622...125,572,184 JBrowse link
G ID2 inhibitor of DNA binding 2 acts_upstream_of_or_within ISO (PMID:18523151) MGI PMID:18523151 NCBI chr14:98,962,001...98,964,486 JBrowse link
G ID2 inhibitor of DNA binding 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 Ensembl chr14:98,961,546...98,964,384 JBrowse link
G SFRP1 secreted frizzled related protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:39,243,775...39,289,050
Ensembl chr 8:39,243,780...39,288,984
JBrowse link
negative regulation of CD4-positive, alpha-beta T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CBFB core-binding factor subunit beta involved_in ISO (PMID:18258917) UniProt PMID:18258917 NCBI chr 5:60,356,303...60,445,793
Ensembl chr 5:60,356,272...60,445,729
JBrowse link
G HMGB1 high mobility group box 1 involved_in ISO (PMID:22473704) UniProt PMID:22473704 NCBI chr 3:9,353,333...9,357,765 JBrowse link
G RUNX3 RUNX family transcription factor 3 involved_in ISO (PMID:18258917) UniProt PMID:18258917 NCBI chr20:107,769,244...107,802,154
Ensembl chr20:107,736,683...107,802,307
JBrowse link
negative regulation of CD8-positive, alpha-beta T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SLC4A2 solute carrier family 4 member 2 involved_in ISO (PMID:24515893) UniProt PMID:24515893 NCBI chr21:119,240,352...119,258,920
Ensembl chr21:119,241,490...119,263,193
JBrowse link
G SOCS1 suppressor of cytokine signaling 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:10,731,866...10,733,745
Ensembl chr 5:10,732,350...10,732,991
JBrowse link
G ZBTB7B zinc finger and BTB domain containing 7B involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:8,812,514...8,829,128
Ensembl chr20:8,812,351...8,817,286
JBrowse link
negative regulation of cytotoxic T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LILRB4 leukocyte immunoglobulin like receptor B4 involved_in ISO (PMID:16493035) ARUK-UCL PMID:16493035 NCBI chr 6:47,299,764...47,333,711 JBrowse link
negative regulation of immature T cell proliferation in thymus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMP4 bone morphogenetic protein 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr24:31,097,673...31,104,774
Ensembl chr24:31,097,538...31,101,225
JBrowse link
G ERBB2 erb-b2 receptor tyrosine kinase 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr16:66,435,488...66,464,993
Ensembl chr16:66,434,251...66,464,952
JBrowse link
G IHH Indian hedgehog signaling molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:104,960,296...104,966,596
Ensembl chr10:104,960,120...104,966,585
JBrowse link
G LOC103233812 C-type lectin domain family 4 member G acts_upstream_of_or_within ISO (PMID:23487419) MGI PMID:23487419 NCBI chr 6:7,206,303...7,211,213
Ensembl chr 6:7,206,712...7,209,431
JBrowse link
G TMEM131L transmembrane 131 like involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:100,021,779...100,190,136
Ensembl chr 7:100,021,797...100,191,255
JBrowse link
negative regulation of lymphocyte differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FBXO7 F-box protein 7 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr19:15,300,135...15,324,256
Ensembl chr19:15,300,158...15,323,956
JBrowse link
negative regulation of memory T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FGL2 fibrinogen like 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr21:71,735,486...71,741,951
Ensembl chr21:71,735,253...71,742,954
JBrowse link
G LOC103234663 interferon lambda-1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:33,901,382...33,904,356
Ensembl chr 6:33,901,801...33,903,894
JBrowse link
negative regulation of natural killer cell differentiation involved in immune response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PGLYRP1 peptidoglycan recognition protein 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 6:39,474,077...39,478,635
Ensembl chr 6:39,474,170...39,477,914
JBrowse link
G PGLYRP2 peptidoglycan recognition protein 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 6:14,072,310...14,084,014
Ensembl chr 6:14,072,423...14,082,798
JBrowse link
G PGLYRP3 peptidoglycan recognition protein 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr20:10,445,996...10,459,908
Ensembl chr20:10,446,660...10,459,478
JBrowse link
G PGLYRP4 peptidoglycan recognition protein 4 acts_upstream_of_or_within ISO (PMID:20709292) MGI PMID:20709292 NCBI chr20:10,406,242...10,422,989
Ensembl chr20:10,405,138...10,422,625
JBrowse link
negative regulation of plasma cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BCL6 BCL6 transcription repressor acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr15:81,997,659...82,022,059
Ensembl chr15:81,998,545...82,009,946
JBrowse link
G CR1 complement C3b/C4b receptor 1 (Knops blood group) acts_upstream_of ISO (PMID:22962438) ARUK-UCL PMID:22962438 NCBI chr25:21,787,237...21,909,462 JBrowse link
negative regulation of positive thymic T cell selection term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PTPN2 protein tyrosine phosphatase non-receptor type 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:71,302,082...71,400,201
Ensembl chr18:71,310,577...71,345,960
JBrowse link
negative regulation of pre-B cell receptor expression term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LAPTM5 lysosomal protein transmembrane 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:102,080,500...102,106,649
Ensembl chr20:102,080,508...102,106,729
JBrowse link
negative regulation of regulatory T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CD44 CD44 molecule (IN blood group) involved_in ISO (PMID:25065622) UniProt PMID:25065622 NCBI chr 1:30,039,854...30,132,646
Ensembl chr 1:30,039,749...30,132,416
JBrowse link
G CTLA4 cytotoxic T-lymphocyte associated protein 4 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr10:89,637,176...89,644,436
Ensembl chr10:89,638,314...89,642,344
JBrowse link
G HSPB1 heat shock protein family B (small) member 1 ISO RGD PMID:30287503 RGD:38549580 NCBI chr28:10,442,530...10,443,804
Ensembl chr28:10,442,398...10,443,855
JBrowse link
G IRF1 interferon regulatory factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr23:35,309,058...35,317,765
Ensembl chr23:35,307,772...35,316,763
JBrowse link
G LAG3 lymphocyte activating 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:6,809,381...6,815,390
Ensembl chr11:6,809,584...6,815,325
JBrowse link
G MDK midkine involved_in ISO (PMID:22323540) UniProt PMID:22323540 NCBI chr 1:18,945,355...18,948,394
Ensembl chr 1:18,946,378...18,947,134
JBrowse link
G TNFSF4 TNF superfamily member 4 involved_in ISO (PMID:18713990) BHF-UCL PMID:18713990 NCBI chr25:55,714,291...55,998,009
Ensembl chr25:55,974,691...55,997,374
JBrowse link
negative regulation of T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CD74 CD74 molecule acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr23:53,008,802...53,022,953
Ensembl chr23:53,009,394...53,022,923
JBrowse link
G DTX1 deltex E3 ubiquitin ligase 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr11:108,299,691...108,343,271
Ensembl chr11:108,300,193...108,342,738
JBrowse link
G IFNA2 interferon alpha 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:58,468,018...58,469,825 JBrowse link
G LOC103234663 interferon lambda-1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:33,901,382...33,904,356
Ensembl chr 6:33,901,801...33,903,894
JBrowse link
G NRARP NOTCH regulated ankyrin repeat protein acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr12:888,636...891,269
Ensembl chr12:888,998...889,342
JBrowse link
G PRDX2 peroxiredoxin 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 6:11,484,452...11,489,067
Ensembl chr 6:11,481,784...11,489,051
JBrowse link
negative regulation of T cell differentiation in thymus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMP4 bone morphogenetic protein 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr24:31,097,673...31,104,774
Ensembl chr24:31,097,538...31,101,225
JBrowse link
G FOXJ1 forkhead box J1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:45,536,973...45,544,331
Ensembl chr16:45,539,510...45,544,299
JBrowse link
G IHH Indian hedgehog signaling molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:104,960,296...104,966,596
Ensembl chr10:104,960,120...104,966,585
JBrowse link
G NFKBID NFKB inhibitor delta acts_upstream_of_or_within ISO (PMID:11931770) MGI PMID:11931770 NCBI chr 6:30,800,122...30,812,991
Ensembl chr 6:30,799,204...30,811,141
JBrowse link
G RAG2 recombination activating 2 ISO RGD PMID:30206106 RGD:38508903 NCBI chr 1:28,645,175...28,653,823
Ensembl chr 1:28,649,930...28,651,513
JBrowse link
G SHH sonic hedgehog signaling molecule acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr21:123,929,937...123,942,451
Ensembl chr21:123,932,900...123,942,395
JBrowse link
G ZC3H8 zinc finger CCCH-type containing 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:15,284,640...15,325,931
Ensembl chr14:15,303,456...15,325,878
JBrowse link
negative regulation of T-helper 1 cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASCL2 achaete-scute family bHLH transcription factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:2,075,629...2,080,462
Ensembl chr 1:2,076,851...2,077,432
JBrowse link
G IL4R interleukin 4 receptor acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 5:25,019,638...25,069,732
Ensembl chr 5:25,046,701...25,070,015
JBrowse link
G JAK3 Janus kinase 3 involved_in ISO (PMID:16020505) BHF-UCL PMID:16020505 NCBI chr 6:16,301,760...16,323,343
Ensembl chr 6:16,300,525...16,322,859
JBrowse link
G TNFSF4 TNF superfamily member 4 involved_in ISO (PMID:9670042) BHF-UCL PMID:9670042 NCBI chr25:55,714,291...55,998,009
Ensembl chr25:55,974,691...55,997,374
JBrowse link
negative regulation of T-helper 17 cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASCL2 achaete-scute family bHLH transcription factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:2,075,629...2,080,462
Ensembl chr 1:2,076,851...2,077,432
JBrowse link
G FOXP3 forkhead box P3 involved_in ISO (PMID:23169781) UniProt PMID:23169781 NCBI chr  X:46,349,890...46,365,133 JBrowse link
G FOXP3 forkhead box P3 involved_in IEA Ensembl GO_REF:0000107 Ensembl chr  X:46,346,754...46,356,928 JBrowse link
G IL2 interleukin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:69,729,635...69,736,279
Ensembl chr 7:69,730,282...69,734,969
JBrowse link
G IL4 interleukin 4 acts_upstream_of_or_within ISO (PMID:18792410) MGI PMID:18792410 NCBI chr23:35,492,158...35,501,349
Ensembl chr23:35,492,939...35,501,258
JBrowse link
G LOC103230557 roquin-1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr25:55,167,418...55,258,964
Ensembl chr25:55,167,077...55,279,088
JBrowse link
G RC3H2 ring finger and CCCH-type domains 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:15,230,206...15,283,253
Ensembl chr12:15,238,124...15,280,689
JBrowse link
G SMAD7 SMAD family member 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:31,993,543...32,024,088
Ensembl chr18:31,993,681...32,024,850
JBrowse link
G TBX21 T-box transcription factor 21 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:68,131,258...68,145,579
Ensembl chr16:68,131,536...68,144,415
JBrowse link
G ZBTB7B zinc finger and BTB domain containing 7B acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr20:8,812,514...8,829,128
Ensembl chr20:8,812,351...8,817,286
JBrowse link
G ZC3H12A zinc finger CCCH-type containing 12A involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:95,388,469...95,398,305
Ensembl chr20:95,388,477...95,397,960
JBrowse link
negative regulation of T-helper 17 cell lineage commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CD69 CD69 molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:9,659,154...9,666,342
Ensembl chr11:9,659,029...9,665,914
JBrowse link
G JAK3 Janus kinase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:16,301,760...16,323,343
Ensembl chr 6:16,300,525...16,322,859
JBrowse link
G LGALS1 galectin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:20,379,144...20,383,303
Ensembl chr19:20,379,003...20,383,464
JBrowse link
G LOC103243413 signal transducer and activator of transcription 5B involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:63,997,486...64,070,392
Ensembl chr16:63,997,441...64,070,445
JBrowse link
G LOXL3 lysyl oxidase like 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:32,722,588...32,745,480
Ensembl chr14:32,725,112...32,745,004
JBrowse link
G STAT5A signal transducer and activator of transcription 5A involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:63,959,265...63,986,627
Ensembl chr16:63,960,515...63,985,026
JBrowse link
G TBX21 T-box transcription factor 21 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:68,131,258...68,145,579
Ensembl chr16:68,131,536...68,144,415
JBrowse link
G TNFSF18 TNF superfamily member 18 involved_in ISO (PMID:24107315) UniProt PMID:24107315 NCBI chr25:56,105,757...56,118,249
Ensembl chr25:56,106,584...56,118,758
JBrowse link
negative regulation of T-helper 2 cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANXA1 annexin A1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:84,207,818...84,226,438
Ensembl chr12:84,207,820...84,226,562
JBrowse link
G ASCL2 achaete-scute family bHLH transcription factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:2,075,629...2,080,462
Ensembl chr 1:2,076,851...2,077,432
JBrowse link
G BCL6 BCL6 transcription repressor acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr15:81,997,659...82,022,059
Ensembl chr15:81,998,545...82,009,946
JBrowse link
G HLX H2.0 like homeobox acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr25:8,641,386...8,647,485
Ensembl chr25:8,641,752...8,646,563
JBrowse link
G SOCS5 suppressor of cytokine signaling 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:60,330,192...60,335,477
Ensembl chr14:60,431,401...60,433,011
Ensembl chr14:60,431,401...60,433,011
JBrowse link
negative regulation of T-helper cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC103230557 roquin-1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr25:55,167,418...55,258,964
Ensembl chr25:55,167,077...55,279,088
JBrowse link
negative T cell selection term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G THEMIS thymocyte selection associated involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:45,665,494...45,886,672
Ensembl chr13:45,682,663...45,884,856
JBrowse link
negative thymic T cell selection term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AIRE autoimmune regulator acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 2:88,019,122...88,031,998
Ensembl chr 2:88,019,522...88,031,801
JBrowse link
G ATG5 autophagy related 5 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr13:67,482,538...67,619,201
Ensembl chr13:67,482,595...67,617,902
JBrowse link
G CCR7 C-C motif chemokine receptor 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:65,620,632...65,632,394
Ensembl chr16:65,620,665...65,632,984
JBrowse link
G CD28 CD28 molecule acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr10:89,471,710...89,505,152
Ensembl chr10:89,471,730...89,500,387
JBrowse link
G CD3E CD3e molecule acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:109,681,142...109,692,835
Ensembl chr 1:109,681,065...109,692,839
JBrowse link
G CD74 CD74 molecule acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr23:53,008,802...53,022,953
Ensembl chr23:53,009,394...53,022,923
JBrowse link
G DOCK2 dedicator of cytokinesis 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr23:71,866,196...72,299,066
Ensembl chr23:71,866,251...72,299,056
JBrowse link
G GLI3 GLI family zinc finger 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:16,386,700...16,665,648
Ensembl chr21:16,549,789...16,662,238
JBrowse link
G LOC103241092 tyrosine-protein kinase ZAP-70 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr14:1,403,294...1,430,205
Ensembl chr14:1,404,325...1,431,015
JBrowse link
G MINK1 misshapen like kinase 1 acts_upstream_of_or_within ISO (PMID:15608642) MGI PMID:15608642 NCBI chr16:4,305,680...4,370,554
Ensembl chr16:4,305,701...4,369,780
JBrowse link
G PTPRC protein tyrosine phosphatase receptor type C acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr25:30,655,014...30,777,367
Ensembl chr25:30,653,044...30,777,303
JBrowse link
G SHH sonic hedgehog signaling molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:123,929,937...123,942,451
Ensembl chr21:123,932,900...123,942,395
JBrowse link
G SPN sialophorin acts_upstream_of_or_within ISO (PMID:10429671) MGI PMID:10429671 NCBI chr 5:26,987,810...26,990,214 JBrowse link
NK T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATF2 activating transcription factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:60,644,623...60,734,465
Ensembl chr10:60,644,635...60,734,475
JBrowse link
G CD1D CD1d molecule involved_in ISO (PMID:9133426) CACAO PMID:9133426 NCBI chr20:5,726,307...5,733,355
Ensembl chr20:5,727,049...5,730,061
JBrowse link
G FOSL2 FOS like 2, AP-1 transcription factor subunit acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr14:79,201,128...79,222,363
Ensembl chr14:79,201,649...79,222,373
JBrowse link
G ITK IL2 inducible T cell kinase acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr23:59,575,113...59,650,166
Ensembl chr23:59,575,179...59,650,559
JBrowse link
G PSAP prosaposin acts_upstream_of_or_within ISO (PMID:14684827) MGI PMID:14684827 NCBI chr 9:59,440,327...59,474,773
Ensembl chr 9:59,440,311...59,474,986
JBrowse link
G STK17A serine/threonine kinase 17a involved_in ISO (PMID:26423156) MGI PMID:26423156 NCBI chr21:14,957,603...15,000,658
Ensembl chr21:14,955,859...15,000,656
JBrowse link
G TXK TXK tyrosine kinase acts_upstream_of_or_within ISO (PMID:18292523) MGI PMID:18292523 NCBI chr27:2,120,429...2,186,950
Ensembl chr27:2,140,685...2,190,398
JBrowse link
G ZBTB7B zinc finger and BTB domain containing 7B involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:8,812,514...8,829,128
Ensembl chr20:8,812,351...8,817,286
JBrowse link
G ZNF683 zinc finger protein 683 acts_upstream_of_or_within ISO (PMID:22885984) MGI PMID:22885984 NCBI chr20:106,336,441...106,411,217 JBrowse link
NK T cell lineage commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G KCTD9 potassium channel tetramerization domain containing 9 acts_upstream_of_or_within ISO (PMID:31024568) MGI PMID:31024568 NCBI chr 8:23,552,420...23,581,969
Ensembl chr 8:23,554,235...23,581,950
JBrowse link
G TOX thymocyte selection associated high mobility group box involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:54,777,490...55,086,819
Ensembl chr 8:54,776,015...54,927,091
JBrowse link
plasma cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BCL6 BCL6 transcription repressor acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr15:81,997,659...82,022,059
Ensembl chr15:81,998,545...82,009,946
JBrowse link
G ENPP1 ectonucleotide pyrophosphatase/phosphodiesterase 1 involved_in ISO (PMID:29259245) MGI PMID:29259245 NCBI chr13:41,670,416...41,755,549 JBrowse link
G ITM2A integral membrane protein 2A acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr  X:68,339,399...68,346,572
Ensembl chr  X:68,339,357...68,346,415
JBrowse link
G LGALS1 galectin 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr19:20,379,144...20,383,303
Ensembl chr19:20,379,003...20,383,464
JBrowse link
G LGALS8 galectin 8 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr25:73,661,941...73,682,949
Ensembl chr25:73,661,556...73,687,534
JBrowse link
G NFKBIZ NFKB inhibitor zeta involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:79,044,624...79,077,736
Ensembl chr22:79,044,619...79,055,776
JBrowse link
G NKX2-3 NK2 homeobox 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 9:92,590,342...92,594,749
Ensembl chr 9:92,591,375...92,594,842
JBrowse link
positive regulation of alpha-beta T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADA adenosine deaminase acts_upstream_of_or_within ISO (PMID:11067867), (PMID:12163459), (PMID:16670300)
(PMID:11067867), (PMID:16670300)
MGI PMID:11067867 PMID:12163459 PMID:16670300 NCBI chr 2:19,167,209...19,200,233 JBrowse link
G GLI3 GLI family zinc finger 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:16,386,700...16,665,648
Ensembl chr21:16,549,789...16,662,238
JBrowse link
G IHH Indian hedgehog signaling molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:104,960,296...104,966,596
Ensembl chr10:104,960,120...104,966,585
JBrowse link
G ITPKB inositol-trisphosphate 3-kinase B acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr25:3,009,464...3,117,729
Ensembl chr25:3,009,353...3,118,235
JBrowse link
G LOC103241092 tyrosine-protein kinase ZAP-70 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr14:1,403,294...1,430,205
Ensembl chr14:1,404,325...1,431,015
JBrowse link
G NKAP NFKB activating protein involved_in IEA Ensembl GO_REF:0000107
G PNP purine nucleoside phosphorylase acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr29:20,992,892...21,001,400
Ensembl chr29:20,993,280...21,001,606
JBrowse link
G RHOA ras homolog family member A involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:10,757,381...10,809,257
Ensembl chr22:10,757,337...10,772,704
JBrowse link
G SHH sonic hedgehog signaling molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:123,929,937...123,942,451
Ensembl chr21:123,932,900...123,942,395
JBrowse link
G SYK spleen associated tyrosine kinase acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr12:101,254,085...101,374,724
Ensembl chr12:101,260,061...101,349,856
JBrowse link
positive regulation of B cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATP11C ATPase phospholipid transporting 11C involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:114,812,948...115,013,557
Ensembl chr  X:114,812,930...115,013,538
JBrowse link
G BAD BCL2 associated agonist of cell death acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:9,949,717...9,964,433
Ensembl chr 1:9,949,762...9,964,432
JBrowse link
G CD27 CD27 molecule involved_in IEA InterPro GO_REF:0000002 NCBI chr11:6,493,414...6,500,062
Ensembl chr11:6,493,542...6,499,738
JBrowse link
G IL2RG interleukin 2 receptor subunit gamma acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr  X:60,905,011...60,915,723
Ensembl chr  X:60,905,343...60,909,149
JBrowse link
G IL7 interleukin 7 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 8:74,230,493...74,292,985
Ensembl chr 8:74,231,809...74,292,384
JBrowse link
G INPP5D inositol polyphosphate-5-phosphatase D involved_in
acts_upstream_of_or_within
IEA TreeGrafter
Ensembl
GO_REF:0000107 GO_REF:0000118 NCBI chr10:119,093,160...119,244,128
Ensembl chr10:119,093,781...119,244,123
JBrowse link
G LOC103243413 signal transducer and activator of transcription 5B acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr16:63,997,486...64,070,392
Ensembl chr16:63,997,441...64,070,445
JBrowse link
G MMP14 matrix metallopeptidase 14 involved_in IEA Ensembl GO_REF:0000107 NCBI chr29:23,201,425...23,212,408
Ensembl chr29:23,201,112...23,212,679
JBrowse link
G NCKAP1L NCK associated protein 1 like involved_in ISO (PMID:19015308) UniProt PMID:19015308 NCBI chr11:50,611,193...50,658,800 JBrowse link
G NCKAP1L NCK associated protein 1 like involved_in IEA Ensembl GO_REF:0000107 Ensembl chr11:50,611,181...50,647,519 JBrowse link
G PCID2 PCI domain containing 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:91,163,158...91,212,450
Ensembl chr 3:91,177,463...91,211,735
JBrowse link
G PPP2R3C protein phosphatase 2 regulatory subunit B''gamma involved_in
acts_upstream_of_or_within
IEA TreeGrafter
Ensembl
GO_REF:0000107 GO_REF:0000118 NCBI chr24:11,901,522...11,935,764
Ensembl chr24:11,900,604...11,935,560
JBrowse link
G SH2D1B SH2 domain containing 1B involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr20:1,667,247...1,684,951
Ensembl chr20:1,668,588...1,682,949
JBrowse link
G SPI1 Spi-1 proto-oncogene involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:17,935,037...17,961,638
Ensembl chr 1:17,935,922...17,961,717
JBrowse link
G STAT5A signal transducer and activator of transcription 5A acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr16:63,959,265...63,986,627
Ensembl chr16:63,960,515...63,985,026
JBrowse link
G SYK spleen associated tyrosine kinase acts_upstream_of_or_within
involved_in
IEA Ensembl GO_REF:0000107 NCBI chr12:101,254,085...101,374,724
Ensembl chr12:101,260,061...101,349,856
JBrowse link
G XBP1 X-box binding protein 1 involved_in ISO (PMID:11460154) UniProt PMID:11460154 NCBI chr19:11,670,605...11,677,168 JBrowse link
positive regulation of CD4-positive, alpha-beta T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CD83 CD83 molecule acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr17:58,022,817...58,052,041
Ensembl chr17:58,022,593...58,041,983
JBrowse link
G FOXP3 forkhead box P3 acts_upstream_of_or_within ISO (PMID:17028180) MGI PMID:17028180 NCBI chr  X:46,349,890...46,365,133 JBrowse link
G FOXP3 forkhead box P3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 Ensembl chr  X:46,346,754...46,356,928 JBrowse link
G NCKAP1L NCK associated protein 1 like involved_in ISO (PMID:19015308) UniProt PMID:19015308 NCBI chr11:50,611,193...50,658,800 JBrowse link
G NCKAP1L NCK associated protein 1 like involved_in IEA Ensembl GO_REF:0000107 Ensembl chr11:50,611,181...50,647,519 JBrowse link
G SASH3 SAM and SH3 domain containing 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr  X:105,057,782...105,072,994
Ensembl chr  X:105,057,570...105,073,354
JBrowse link
G SOCS1 suppressor of cytokine signaling 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:10,731,866...10,733,745
Ensembl chr 5:10,732,350...10,732,991
JBrowse link
G TNFSF4 TNF superfamily member 4 involved_in ISO (PMID:20639485) BHF-UCL PMID:20639485 NCBI chr25:55,714,291...55,998,009
Ensembl chr25:55,974,691...55,997,374
JBrowse link
G ZBTB7B zinc finger and BTB domain containing 7B involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:8,812,514...8,829,128
Ensembl chr20:8,812,351...8,817,286
JBrowse link
positive regulation of CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FOXP3 forkhead box P3 acts_upstream_of_or_within ISO (PMID:16301745), (PMID:18573908)
(PMID:16275384)
(PMID:12612578)
MGI PMID:12612578 PMID:16275384 PMID:16301745 PMID:18573908 NCBI chr  X:46,349,890...46,365,133 JBrowse link
G FOXP3 forkhead box P3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 Ensembl chr  X:46,346,754...46,356,928 JBrowse link
G IL2RG interleukin 2 receptor subunit gamma acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr  X:60,905,011...60,915,723
Ensembl chr  X:60,905,343...60,909,149
JBrowse link
G KLHL25 kelch like family member 25 involved_in IEA Ensembl GO_REF:0000107 NCBI chr29:4,376,292...4,412,778
Ensembl chr29:4,385,011...4,386,780
JBrowse link
G LOC103221700 HLA class II histocompatibility antigen, DR beta 3 chain involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:39,471,058...39,484,265 JBrowse link
G LOC103247148 HLA class II histocompatibility antigen, DRB1 beta chain involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:39,556,020...39,564,488 JBrowse link
G LOC119618083 HLA class II histocompatibility antigen, DRB1 beta chain-like involved_in IEA Ensembl GO_REF:0000107
G MHC-DRA major histocompatibility complex, class II, DR alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:39,623,324...39,628,464
Ensembl chr17:39,622,402...39,629,261
JBrowse link
positive regulation of CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation involved in immune response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G IFNG interferon gamma involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:63,785,493...63,791,071
Ensembl chr11:63,786,041...63,790,473
JBrowse link
G LOC103242599 galectin-9 involved_in ISO (PMID:20209097) UniProt PMID:20209097 NCBI chr16:21,421,034...21,439,583 JBrowse link
positive regulation of CD8-positive, alpha-beta T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CBFB core-binding factor subunit beta involved_in ISO (PMID:18258917) UniProt PMID:18258917 NCBI chr 5:60,356,303...60,445,793
Ensembl chr 5:60,356,272...60,445,729
JBrowse link
G LILRB4 leukocyte immunoglobulin like receptor B4 involved_in ISO (PMID:18420485) ARUK-UCL PMID:18420485 NCBI chr 6:47,299,764...47,333,711 JBrowse link
G NCKAP1L NCK associated protein 1 like involved_in ISO (PMID:19015308) UniProt PMID:19015308 NCBI chr11:50,611,193...50,658,800 JBrowse link
G NCKAP1L NCK associated protein 1 like involved_in IEA Ensembl GO_REF:0000107 Ensembl chr11:50,611,181...50,647,519 JBrowse link
G RUNX3 RUNX family transcription factor 3 involved_in ISO (PMID:18258917) UniProt PMID:18258917 NCBI chr20:107,769,244...107,802,154
Ensembl chr20:107,736,683...107,802,307
JBrowse link
positive regulation of cytotoxic T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SART1 spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:8,279,821...8,296,282
Ensembl chr 1:8,275,123...8,296,245
JBrowse link
G TNFSF9 TNF superfamily member 9 involved_in ISO
IEA
RGD
TreeGrafter
PMID:19187795 GO_REF:0000118 RGD:2317344 NCBI chr 6:6,131,157...6,136,345
Ensembl chr 6:6,131,571...6,135,463
JBrowse link
positive regulation of gamma-delta T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LCK LCK proto-oncogene, Src family tyrosine kinase acts_upstream_of_or_within ISO (PMID:7807014) MGI PMID:7807014 NCBI chr20:100,582,718...100,618,041 JBrowse link
G LCK LCK proto-oncogene, Src family tyrosine kinase acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 Ensembl chr20:100,583,452...100,618,015 JBrowse link
G LEF1 lymphoid enhancer binding factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:55,974,770...56,096,214
Ensembl chr 7:55,990,621...56,094,110
JBrowse link
G LOC103243413 signal transducer and activator of transcription 5B acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr16:63,997,486...64,070,392
Ensembl chr16:63,997,441...64,070,445
JBrowse link
G NCKAP1L NCK associated protein 1 like involved_in ISO (PMID:19015308) UniProt PMID:19015308 NCBI chr11:50,611,193...50,658,800 JBrowse link
G NCKAP1L NCK associated protein 1 like involved_in IEA Ensembl GO_REF:0000107 Ensembl chr11:50,611,181...50,647,519 JBrowse link
G PTPRC protein tyrosine phosphatase receptor type C acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr25:30,655,014...30,777,367
Ensembl chr25:30,653,044...30,777,303
JBrowse link
G SOX13 SRY-box transcription factor 13 involved_in IEA Ensembl GO_REF:0000107 NCBI chr25:25,220,341...25,275,981
Ensembl chr25:25,221,945...25,235,449
JBrowse link
G STAT5A signal transducer and activator of transcription 5A acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr16:63,959,265...63,986,627
Ensembl chr16:63,960,515...63,985,026
JBrowse link
G SYK spleen associated tyrosine kinase acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr12:101,254,085...101,374,724
Ensembl chr12:101,260,061...101,349,856
JBrowse link
positive regulation of immature T cell proliferation in thymus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BLM BLM RecQ like helicase acts_upstream_of_or_within ISO (PMID:17210642) MGI PMID:17210642 NCBI chr29:9,046,485...9,152,320
Ensembl chr29:9,045,373...9,152,254
JBrowse link
G BMI1 BMI1 proto-oncogene, polycomb ring finger involved_in ISO (PMID:15964995) HGNC-UCL PMID:15964995 NCBI chr 9:22,095,592...22,104,894 JBrowse link
G BMI1 BMI1 proto-oncogene, polycomb ring finger involved_in IEA Ensembl GO_REF:0000107 Ensembl chr 9:22,090,437...22,105,447 JBrowse link
G FOXP3 forkhead box P3 acts_upstream_of_or_within ISO (PMID:16230479) MGI PMID:16230479 NCBI chr  X:46,349,890...46,365,133 JBrowse link
G FOXP3 forkhead box P3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 Ensembl chr  X:46,346,754...46,356,928 JBrowse link
G IL1A interleukin 1 alpha involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr14:15,789,710...15,801,938
Ensembl chr14:15,789,013...15,796,611
JBrowse link
G IL1B interleukin 1 beta involved_in ISO
IEA
RGD
TreeGrafter
PMID:8590311 GO_REF:0000118 RGD:7401228 NCBI chr14:15,844,628...15,852,652
Ensembl chr14:15,844,672...15,850,729
JBrowse link
G RIPK2 receptor interacting serine/threonine kinase 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 8:84,843,391...84,881,087
Ensembl chr 8:84,843,471...84,881,303
JBrowse link
G SHH sonic hedgehog signaling molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:123,929,937...123,942,451
Ensembl chr21:123,932,900...123,942,395
JBrowse link
positive regulation of lymphocyte differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G INPP5D inositol polyphosphate-5-phosphatase D acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr10:119,093,160...119,244,128
Ensembl chr10:119,093,781...119,244,123
JBrowse link
G LOC103243413 signal transducer and activator of transcription 5B acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr16:63,997,486...64,070,392
Ensembl chr16:63,997,441...64,070,445
JBrowse link
G NCKAP1L NCK associated protein 1 like involved_in ISO (PMID:19015308) UniProt PMID:19015308 NCBI chr11:50,611,193...50,658,800 JBrowse link
G NCKAP1L NCK associated protein 1 like involved_in IEA Ensembl GO_REF:0000107 Ensembl chr11:50,611,181...50,647,519 JBrowse link
G PRKDC protein kinase, DNA-activated, catalytic subunit involved_in ISO (PMID:32103174) UniProt PMID:32103174 NCBI chr 8:43,915,226...44,119,547
Ensembl chr 8:43,914,636...44,119,541
JBrowse link
G STAT5A signal transducer and activator of transcription 5A acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr16:63,959,265...63,986,627
Ensembl chr16:63,960,515...63,985,026
JBrowse link
G XRCC6 X-ray repair cross complementing 6 involved_in ISO (PMID:32103174) UniProt PMID:32103174 NCBI chr19:24,160,459...24,204,237
Ensembl chr19:24,160,483...24,206,320
JBrowse link
positive regulation of memory T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CD46 CD46 molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chr25:21,650,825...21,693,898
Ensembl chr25:21,655,969...21,693,878
JBrowse link
G IL23A interleukin 23 subunit alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:52,289,486...52,296,735
Ensembl chr11:52,295,106...52,297,244
JBrowse link
G LOC103221700 HLA class II histocompatibility antigen, DR beta 3 chain involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:39,471,058...39,484,265 JBrowse link
G LOC103247148 HLA class II histocompatibility antigen, DRB1 beta chain involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:39,556,020...39,564,488 JBrowse link
G LOC119618083 HLA class II histocompatibility antigen, DRB1 beta chain-like involved_in IEA Ensembl GO_REF:0000107
G MHC-DRA major histocompatibility complex, class II, DR alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:39,623,324...39,628,464
Ensembl chr17:39,622,402...39,629,261
JBrowse link
G PCK1 phosphoenolpyruvate carboxykinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:6,550,806...6,556,499
Ensembl chr 2:6,549,652...6,556,478
JBrowse link
G TNFSF4 TNF superfamily member 4 involved_in ISO (PMID:18713990) BHF-UCL PMID:18713990 NCBI chr25:55,714,291...55,998,009
Ensembl chr25:55,974,691...55,997,374
JBrowse link
positive regulation of natural killer cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AXL AXL receptor tyrosine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:35,537,718...35,580,143
Ensembl chr 6:35,537,773...35,580,716
JBrowse link
G FLT3LG fms related receptor tyrosine kinase 3 ligand acts_upstream_of_or_within ISO (PMID:14607906) MGI PMID:14607906 NCBI chr 6:42,653,820...42,665,017
Ensembl chr 6:42,654,412...42,660,458
JBrowse link
G GAS6 growth arrest specific 6 involved_in IEA Ensembl GO_REF:0000107 Ensembl chr 3:91,720,882...91,738,069 JBrowse link
G IL15 interleukin 15 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 7:88,548,773...88,644,977
Ensembl chr 7:88,548,671...88,645,488
JBrowse link
G IL15RA interleukin 15 receptor subunit alpha acts_upstream_of_or_within ISO (PMID:14607906) MGI PMID:14607906 NCBI chr 9:6,061,475...6,096,370
Ensembl chr 9:6,061,197...6,096,250
JBrowse link
G IL21 interleukin 21 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 7:69,859,793...69,872,237
Ensembl chr 7:69,863,535...69,872,025
JBrowse link
G LOC103214855 growth arrest-specific protein 6 involved_in ISO (PMID:18840707) UniProt PMID:18840707 NCBI chr 3:91,720,871...91,762,712 JBrowse link
G LOC103243413 signal transducer and activator of transcription 5B acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr16:63,997,486...64,070,392
Ensembl chr16:63,997,441...64,070,445
JBrowse link
G RASGRP1 RAS guanyl releasing protein 1 involved_in ISO (PMID:21957144) CACAO PMID:21957144 NCBI chr26:44,405,007...44,483,291 JBrowse link
G RASGRP1 RAS guanyl releasing protein 1 involved_in IEA Ensembl GO_REF:0000107 Ensembl chr26:44,451,634...44,486,570 JBrowse link
G STAT5A signal transducer and activator of transcription 5A acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr16:63,959,265...63,986,627
Ensembl chr16:63,960,515...63,985,026
JBrowse link
G TOX thymocyte selection associated high mobility group box acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 8:54,777,490...55,086,819
Ensembl chr 8:54,776,015...54,927,091
JBrowse link
G ZBTB1 zinc finger and BTB domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr24:41,712,721...41,738,853
Ensembl chr24:41,712,114...41,740,654
JBrowse link
positive regulation of NK T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AP3B1 adaptor related protein complex 3 subunit beta 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 4:72,225,658...72,524,971
Ensembl chr 4:72,225,599...72,524,933
JBrowse link
G AP3D1 adaptor related protein complex 3 subunit delta 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 6:1,901,669...1,951,352
Ensembl chr 6:1,901,507...1,951,314
JBrowse link
G CD1D CD1d molecule acts_upstream_of_or_within ISO (PMID:9133426)
(PMID:10201995)
MGI PMID:9133426 PMID:10201995 NCBI chr20:5,726,307...5,733,355
Ensembl chr20:5,727,049...5,730,061
JBrowse link
G TGFBR2 transforming growth factor beta receptor 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr15:75,112,903...75,200,263
Ensembl chr15:75,112,561...75,197,711
JBrowse link
G ZBTB16 zinc finger and BTB domain containing 16 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:105,446,067...105,648,771
Ensembl chr 1:105,449,994...105,643,344
JBrowse link
positive regulation of plasma cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DDRGK1 DDRGK domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:33,846,591...33,879,770
Ensembl chr 2:33,860,439...33,880,101
JBrowse link
G IL10 interleukin 10 acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr25:22,590,389...22,595,877
Ensembl chr25:22,590,962...22,594,836
JBrowse link
G IL2 interleukin 2 acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr 7:69,729,635...69,736,279
Ensembl chr 7:69,730,282...69,734,969
JBrowse link
G XBP1 X-box binding protein 1 involved_in ISO (PMID:11460154) UniProt PMID:11460154 NCBI chr19:11,670,605...11,677,168 JBrowse link
positive regulation of pro-T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ZBTB1 zinc finger and BTB domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr24:41,712,721...41,738,853
Ensembl chr24:41,712,114...41,740,654
JBrowse link
positive regulation of regulatory T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AMBRA1 autophagy and beclin 1 regulator 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:18,777,807...18,932,784
Ensembl chr 1:18,734,926...18,932,785
JBrowse link
G BCL6 BCL6 transcription repressor involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:81,997,659...82,022,059
Ensembl chr15:81,998,545...82,009,946
JBrowse link
G BTN2A2 butyrophilin subfamily 2 member A2 acts_upstream_of_or_within ISO (PMID:23589618) MGI PMID:23589618 NCBI chr17:45,857,898...45,869,901
Ensembl chr17:45,744,451...45,868,941
JBrowse link
G CARMIL2 capping protein regulator and myosin 1 linker 2 acts_upstream_of_or_within ISO (PMID:23793062) MGI PMID:23793062 NCBI chr 5:59,787,069...59,801,615
Ensembl chr 5:59,787,120...59,801,122
JBrowse link
G CD46 CD46 molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chr25:21,650,825...21,693,898
Ensembl chr25:21,655,969...21,693,878
JBrowse link
G CR1 complement C3b/C4b receptor 1 (Knops blood group) involved_in ISO (PMID:25742728) ARUK-UCL PMID:25742728 NCBI chr25:21,787,237...21,909,462 JBrowse link
G DUSP10 dual specificity phosphatase 10 involved_in IEA Ensembl GO_REF:0000107 NCBI chr25:7,790,969...7,833,485
Ensembl chr25:7,792,913...7,834,346
JBrowse link
G FOXO3 forkhead box O3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:65,175,764...65,303,107
Ensembl chr13:65,195,376...65,301,725
JBrowse link
G FOXP3 forkhead box P3 involved_in
acts_upstream_of_or_within
ISO (PMID:30513302)
(PMID:15780990)
(PMID:12522256), (PMID:15100250), (PMID:16769892), (PMID:17028180)
UniProt
MGI
PMID:12522256 PMID:15100250 PMID:15780990 PMID:16769892 PMID:17028180 More... NCBI chr  X:46,349,890...46,365,133 JBrowse link
G FOXP3 forkhead box P3 acts_upstream_of_or_within
involved_in
IEA Ensembl GO_REF:0000107 Ensembl chr  X:46,346,754...46,356,928 JBrowse link
G IL2 interleukin 2 ISO RGD PMID:6233372 RGD:1600097 NCBI chr 7:69,729,635...69,736,279
Ensembl chr 7:69,730,282...69,734,969
JBrowse link
G IL4I1 interleukin 4 induced 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:43,046,357...43,061,295
Ensembl chr 6:43,046,379...43,057,851
JBrowse link
G KAT5 lysine acetyltransferase 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:8,528,097...8,544,512
Ensembl chr 1:8,526,788...8,544,972
JBrowse link
G LILRB4 leukocyte immunoglobulin like receptor B4 involved_in ISO (PMID:20935202), (PMID:22387553) BHF-UCL PMID:20935202 PMID:22387553 NCBI chr 6:47,299,764...47,333,711 JBrowse link
G LOC103242599 galectin-9 involved_in ISO (PMID:25065622) UniProt PMID:25065622 NCBI chr16:21,421,034...21,439,583 JBrowse link
G SOCS1 suppressor of cytokine signaling 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:10,731,866...10,733,745
Ensembl chr 5:10,732,350...10,732,991
JBrowse link
G SOX12 SRY-box transcription factor 12 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:35,454,287...35,457,481
Ensembl chr 2:35,454,655...35,455,599
JBrowse link
G TGFB1 transforming growth factor beta 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:35,651,583...35,674,387
Ensembl chr 6:35,648,677...35,674,365
JBrowse link
G VSIR V-set immunoregulatory receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:59,516,012...59,538,628
Ensembl chr 9:59,516,073...59,542,242
JBrowse link
positive regulation of T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADA adenosine deaminase acts_upstream_of_or_within ISO (PMID:9478961)
(PMID:7731963)
MGI PMID:7731963 PMID:9478961 NCBI chr 2:19,167,209...19,200,233 JBrowse link
G BAD BCL2 associated agonist of cell death acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:9,949,717...9,964,433
Ensembl chr 1:9,949,762...9,964,432
JBrowse link
G CD27 CD27 molecule involved_in IEA InterPro GO_REF:0000002 NCBI chr11:6,493,414...6,500,062
Ensembl chr11:6,493,542...6,499,738
JBrowse link
G CD74 CD74 molecule acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr23:53,008,802...53,022,953
Ensembl chr23:53,009,394...53,022,923
JBrowse link
G CYLD CYLD lysine 63 deubiquitinase acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 5:36,541,022...36,600,874
Ensembl chr 5:36,541,764...36,595,417
JBrowse link
G GATA3 GATA binding protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:8,101,404...8,122,762
Ensembl chr 9:8,101,432...8,123,064
JBrowse link
G IL12A interleukin 12A acts_upstream_of_or_within ISO (PMID:22968459) MGI PMID:22968459 NCBI chr15:30,887,048...30,896,577
Ensembl chr15:30,887,897...30,894,550
JBrowse link
G IL1RL2 interleukin 1 receptor like 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr14:5,862,140...5,912,789
Ensembl chr14:5,863,727...5,915,370
JBrowse link
G IL2 interleukin 2 ISO RGD PMID:9352365 RGD:1600138 NCBI chr 7:69,729,635...69,736,279
Ensembl chr 7:69,730,282...69,734,969
JBrowse link
G IL2RA interleukin 2 receptor subunit alpha ISO RGD PMID:9352365 RGD:1600138 NCBI chr 9:6,134,961...6,187,731
Ensembl chr 9:6,141,430...6,149,447
JBrowse link
G IL36B interleukin 36 beta acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:22968459) MGI
TreeGrafter
PMID:22968459 GO_REF:0000118 NCBI chr14:16,043,133...16,054,750 JBrowse link
G IL4 interleukin 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr23:35,492,158...35,501,349
Ensembl chr23:35,492,939...35,501,258
JBrowse link
G IL7 interleukin 7 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 8:74,230,493...74,292,985
Ensembl chr 8:74,231,809...74,292,384
JBrowse link
G LOC103241092 tyrosine-protein kinase ZAP-70 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr14:1,403,294...1,430,205
Ensembl chr14:1,404,325...1,431,015
JBrowse link
G MDK midkine involved_in ISO (PMID:28183532) UniProt PMID:28183532 NCBI chr 1:18,945,355...18,948,394
Ensembl chr 1:18,946,378...18,947,134
JBrowse link
G MHC-DMA HLA class II histocompatibility antigen, DM alpha chain acts_upstream_of_or_within ISO (PMID:8598040)
(PMID:8638109)
(PMID:8598041), (PMID:9432982)
MGI PMID:8598040 PMID:8598041 PMID:8638109 PMID:9432982 NCBI chr17:39,142,340...39,151,804
Ensembl chr17:39,142,395...39,146,252
JBrowse link
G MHC-DQA1 major histocompatibility complex, class II, DQ alpha 1 acts_upstream_of_or_within ISO (PMID:8598041) MGI PMID:8598041 NCBI chr17:39,422,445...39,428,777
Ensembl chr17:39,420,134...39,428,871
JBrowse link
G PIK3R6 phosphoinositide-3-kinase regulatory subunit 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:8,158,842...8,224,192
Ensembl chr16:8,159,400...8,223,937
JBrowse link
G PTPRC protein tyrosine phosphatase receptor type C acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr25:30,655,014...30,777,367
Ensembl chr25:30,653,044...30,777,303
JBrowse link
G RAG1 recombination activating 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:28,667,996...28,701,002 JBrowse link
G RHOH ras homolog family member H involved_in IEA Ensembl GO_REF:0000107 NCBI chr27:10,061,316...10,109,124
Ensembl chr27:10,062,014...10,062,589
JBrowse link
G WNT10B Wnt family member 10B acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr11:45,205,728...45,229,050
Ensembl chr11:45,205,566...45,210,893
JBrowse link
G XBP1 X-box binding protein 1 involved_in ISO (PMID:11460154) UniProt PMID:11460154 NCBI chr19:11,670,605...11,677,168 JBrowse link
G ZBTB1 zinc finger and BTB domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr24:41,712,721...41,738,853
Ensembl chr24:41,712,114...41,740,654
JBrowse link
G ZMIZ1 zinc finger MIZ-type containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:52,150,810...52,414,793
Ensembl chr 9:52,148,075...52,259,728
JBrowse link
positive regulation of T cell differentiation in thymus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADA adenosine deaminase acts_upstream_of_or_within ISO (PMID:11067867), (PMID:16670300)
(PMID:11067867), (PMID:12163459), (PMID:16670300)
(PMID:11435465)
MGI PMID:11067867 PMID:11435465 PMID:12163459 PMID:16670300 NCBI chr 2:19,167,209...19,200,233 JBrowse link
G ADAM8 ADAM metallopeptidase domain 8 involved_in ISO (PMID:20856819) BHF-UCL PMID:20856819 NCBI chr26:53,114,184...53,129,650
Ensembl chr26:53,114,924...53,126,900
JBrowse link
G EGR3 early growth response 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 8:20,767,219...20,772,838
Ensembl chr 8:20,767,224...20,772,682
JBrowse link
G IHH Indian hedgehog signaling molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:104,960,296...104,966,596
Ensembl chr10:104,960,120...104,966,585
JBrowse link
G IL2RG interleukin 2 receptor subunit gamma acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr  X:60,905,011...60,915,723
Ensembl chr  X:60,905,343...60,909,149
JBrowse link
G IL7R interleukin 7 receptor acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 4:34,701,724...34,724,241
Ensembl chr 4:34,701,531...34,721,361
JBrowse link
G LOC103240354 pantetheinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:40,819,738...40,853,827
Ensembl chr13:40,819,950...40,855,171
JBrowse link
G RASGRP1 RAS guanyl releasing protein 1 involved_in ISO (PMID:11017103) CACAO PMID:11017103 NCBI chr26:44,405,007...44,483,291 JBrowse link
G RASGRP1 RAS guanyl releasing protein 1 involved_in IEA Ensembl GO_REF:0000107 Ensembl chr26:44,451,634...44,486,570 JBrowse link
G SHH sonic hedgehog signaling molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:123,929,937...123,942,451
Ensembl chr21:123,932,900...123,942,395
JBrowse link
G TESPA1 thymocyte expressed, positive selection associated 1 involved_in ISO (PMID:22561606) UniProt PMID:22561606 NCBI chr11:51,044,269...51,079,210
Ensembl chr11:51,042,095...51,070,939
JBrowse link
positive regulation of T-helper 1 cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANXA1 annexin A1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:84,207,818...84,226,438
Ensembl chr12:84,207,820...84,226,562
JBrowse link
G CCL19 C-C motif chemokine ligand 19 involved_in ISO (PMID:15845453) BHF-UCL PMID:15845453 NCBI chr12:45,928,212...45,930,897
Ensembl chr12:45,929,071...45,930,904
JBrowse link
G HLX H2.0 like homeobox acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr25:8,641,386...8,647,485
Ensembl chr25:8,641,752...8,646,563
JBrowse link
G RIPK2 receptor interacting serine/threonine kinase 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 8:84,843,391...84,881,087
Ensembl chr 8:84,843,471...84,881,303
JBrowse link
G SOCS5 suppressor of cytokine signaling 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:60,330,192...60,335,477
Ensembl chr14:60,431,401...60,433,011
Ensembl chr14:60,431,401...60,433,011
JBrowse link
positive regulation of T-helper 17 cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MALT1 MALT1 paracaspase involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:20,984,985...21,064,198
Ensembl chr18:20,985,819...21,054,554
JBrowse link
G NFKBID NFKB inhibitor delta involved_in ISO (PMID:25282160) UniProt PMID:25282160 NCBI chr 6:30,800,122...30,812,991
Ensembl chr 6:30,799,204...30,811,141
JBrowse link
G NFKBIZ NFKB inhibitor zeta involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:79,044,624...79,077,736
Ensembl chr22:79,044,619...79,055,776
JBrowse link
G NLRP3 NLR family pyrin domain containing 3 involved_in ISO (PMID:26098997) UniProt PMID:26098997 NCBI chr25:84,431,436...84,463,387
Ensembl chr25:84,434,527...84,463,249
JBrowse link
positive regulation of T-helper 17 cell lineage commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BRD2 bromodomain containing 2 involved_in ISO (PMID:28262505) UniProt PMID:28262505 NCBI chr17:39,113,519...39,126,267 JBrowse link
G BRD2 bromodomain containing 2 involved_in IEA Ensembl GO_REF:0000107 Ensembl chr17:39,114,700...39,122,051 JBrowse link
G BRD4 bromodomain containing 4 involved_in ISO (PMID:28262505) UniProt PMID:28262505 NCBI chr 6:13,836,332...13,883,459
Ensembl chr 6:13,836,324...13,873,877
JBrowse link
G EP300 E1A binding protein p300 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:23,634,132...23,726,095
Ensembl chr19:23,634,571...23,724,979
JBrowse link
G IL23A interleukin 23 subunit alpha involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr11:52,289,486...52,296,735
Ensembl chr11:52,295,106...52,297,244
JBrowse link
G OPA1 OPA1 mitochondrial dynamin like GTPase involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:87,679,656...87,778,767
Ensembl chr15:87,679,077...87,779,102
JBrowse link
positive regulation of T-helper 2 cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G IL18 interleukin 18 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:103,485,868...103,511,632
Ensembl chr 1:103,482,083...103,510,150
JBrowse link
G IL4R interleukin 4 receptor acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 5:25,019,638...25,069,732
Ensembl chr 5:25,046,701...25,070,015
JBrowse link
G IL6 interleukin 6 acts_upstream_of_or_within ISO (PMID:12594267) MGI PMID:12594267 NCBI chr21:35,577,513...35,582,385
Ensembl chr21:35,577,939...35,582,237
JBrowse link
G NLRP3 NLR family pyrin domain containing 3 involved_in ISO (PMID:26098997) UniProt PMID:26098997 NCBI chr25:84,431,436...84,463,387
Ensembl chr25:84,434,527...84,463,249
JBrowse link
G PRKCZ protein kinase C zeta involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:129,367,309...129,502,681
Ensembl chr20:129,365,679...129,485,818
JBrowse link
G RARA retinoic acid receptor alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:65,817,849...65,866,862
Ensembl chr16:65,817,757...65,866,878
JBrowse link
G TNFSF4 TNF superfamily member 4 involved_in ISO (PMID:18354165) BHF-UCL PMID:18354165 NCBI chr25:55,714,291...55,998,009
Ensembl chr25:55,974,691...55,997,374
JBrowse link
positive regulation of T-helper cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SHB SH2 domain containing adaptor protein B acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr12:42,520,803...42,669,892
Ensembl chr12:42,520,905...42,669,211
JBrowse link
positive T cell selection term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BCL11B BCL11 transcription factor B acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr24:77,122,591...77,222,562
Ensembl chr24:77,122,689...77,221,454
JBrowse link
G BRAF B-Raf proto-oncogene, serine/threonine kinase acts_upstream_of_or_within ISO (PMID:23334952) MGI PMID:23334952 NCBI chr21:109,495,525...109,690,261 JBrowse link
G BRAF B-Raf proto-oncogene, serine/threonine kinase acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 Ensembl chr21:109,545,491...109,690,195 JBrowse link
G THEMIS thymocyte selection associated involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:45,665,494...45,886,672
Ensembl chr13:45,682,663...45,884,856
JBrowse link
positive thymic T cell selection term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CD1D CD1d molecule acts_upstream_of_or_within ISO (PMID:9133426) MGI PMID:9133426 NCBI chr20:5,726,307...5,733,355
Ensembl chr20:5,727,049...5,730,061
JBrowse link
G CD3D CD3d molecule involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr 1:109,715,148...109,719,576
Ensembl chr 1:109,713,017...109,719,950
JBrowse link
G CD3E CD3e molecule involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 1:109,681,142...109,692,835
Ensembl chr 1:109,681,065...109,692,839
JBrowse link
G CD3G CD3g molecule involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 1:109,721,150...109,730,267
Ensembl chr 1:109,720,789...109,732,014
JBrowse link
G CD74 CD74 molecule acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr23:53,008,802...53,022,953
Ensembl chr23:53,009,394...53,022,923
JBrowse link
G DOCK2 dedicator of cytokinesis 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr23:71,866,196...72,299,066
Ensembl chr23:71,866,251...72,299,056
JBrowse link
G ITPKB inositol-trisphosphate 3-kinase B acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr25:3,009,464...3,117,729
Ensembl chr25:3,009,353...3,118,235
JBrowse link
G LOC103241092 tyrosine-protein kinase ZAP-70 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr14:1,403,294...1,430,205
Ensembl chr14:1,404,325...1,431,015
JBrowse link
G MHC-DMA HLA class II histocompatibility antigen, DM alpha chain acts_upstream_of_or_within ISO (PMID:8598040)
(PMID:8638109)
(PMID:8598041), (PMID:9432982)
MGI PMID:8598040 PMID:8598041 PMID:8638109 PMID:9432982 NCBI chr17:39,142,340...39,151,804
Ensembl chr17:39,142,395...39,146,252
JBrowse link
G NFATC3 nuclear factor of activated T cells 3 involved_in ISO (PMID:17579027) UniProt PMID:17579027 NCBI chr 5:59,193,139...59,346,361 JBrowse link
G PTPRC protein tyrosine phosphatase receptor type C acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr25:30,655,014...30,777,367
Ensembl chr25:30,653,044...30,777,303
JBrowse link
G SHH sonic hedgehog signaling molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:123,929,937...123,942,451
Ensembl chr21:123,932,900...123,942,395
JBrowse link
G SRF serum response factor acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr17:28,983,161...28,993,465
Ensembl chr17:28,983,002...28,992,995
JBrowse link
G STK11 serine/threonine kinase 11 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 6:973,033...996,857
Ensembl chr 6:974,144...995,136
JBrowse link
pre-B cell allelic exclusion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATM ATM serine/threonine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:99,653,208...99,786,889
Ensembl chr 1:99,653,139...99,791,520
JBrowse link
G RAG1 recombination activating 1 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr 1:28,667,996...28,701,002 JBrowse link
G RAG2 recombination activating 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:28,645,175...28,653,823
Ensembl chr 1:28,649,930...28,651,513
JBrowse link
pre-B cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATP11C ATPase phospholipid transporting 11C involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:114,812,948...115,013,557
Ensembl chr  X:114,812,930...115,013,538
JBrowse link
G CD24 CD24 molecule acts_upstream_of_or_within ISO (PMID:7795661), (PMID:9028339) MGI PMID:7795661 PMID:9028339 NCBI chr13:66,863,164...66,868,951 JBrowse link
G FOXP1 forkhead box P1 acts_upstream_of_or_within ISO (PMID:16819554) MGI PMID:16819554 NCBI chr22:31,907,941...32,538,294
Ensembl chr22:31,912,460...32,154,502
JBrowse link
G LRRC8A leucine rich repeat containing 8 VRAC subunit A involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:9,237,706...9,272,637
Ensembl chr12:9,234,738...9,272,565
JBrowse link
pro-T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FLT3 fms related receptor tyrosine kinase 3 acts_upstream_of_or_within ISO (PMID:7621074) MGI PMID:7621074 NCBI chr 3:7,117,579...7,222,600
Ensembl chr 3:7,116,947...7,222,849
JBrowse link
G GATA3 GATA binding protein 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 9:8,101,404...8,122,762
Ensembl chr 9:8,101,432...8,123,064
JBrowse link
G SPI1 Spi-1 proto-oncogene involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:17,935,037...17,961,638
Ensembl chr 1:17,935,922...17,961,717
JBrowse link
regulation of alpha-beta T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANKLE1 ankyrin repeat and LEM domain containing 1 NOT|involved_in ISO (PMID:27010503) UniProt PMID:27010503 NCBI chr 6:15,788,861...15,794,825
Ensembl chr 6:15,789,355...15,795,025
JBrowse link
regulation of B cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANKLE1 ankyrin repeat and LEM domain containing 1 NOT|involved_in ISO (PMID:27010503) UniProt PMID:27010503 NCBI chr 6:15,788,861...15,794,825
Ensembl chr 6:15,789,355...15,795,025
JBrowse link
G CARD11 caspase recruitment domain family member 11 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 Ensembl chr28:18,675,524...18,715,388 JBrowse link
G CD24 CD24 molecule acts_upstream_of_or_within ISO (PMID:7795661), (PMID:9028339) MGI PMID:7795661 PMID:9028339 NCBI chr13:66,863,164...66,868,951 JBrowse link
G CYLD CYLD lysine 63 deubiquitinase acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 5:36,541,022...36,600,874
Ensembl chr 5:36,541,764...36,595,417
JBrowse link
G FCRL3 Fc receptor like 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:6,201,252...6,223,913
Ensembl chr20:6,202,200...6,224,479
JBrowse link
G IKZF3 IKAROS family zinc finger 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:66,302,107...66,399,152
Ensembl chr16:66,303,117...66,397,765
JBrowse link
G IL4I1 interleukin 4 induced 1 involved_in ISO (PMID:29288206) UniProt PMID:29288206 NCBI chr 6:43,046,357...43,061,295
Ensembl chr 6:43,046,379...43,057,851
JBrowse link
G LOC103223747 SLAM family member 8 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr20:4,114,403...4,127,122
Ensembl chr20:4,116,630...4,124,988
JBrowse link
G LOC103227720 twinfilin-2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:13,581,102...13,598,830
Ensembl chr22:13,589,034...13,598,752
Ensembl chr22:13,589,034...13,598,752
JBrowse link
G LOC103246958 caspase recruitment domain-containing protein 11 acts_upstream_of_or_within ISO (PMID:12867038) MGI PMID:12867038 NCBI chr28:18,657,941...18,714,202 JBrowse link
G NFAM1 NFAT activating protein with ITAM motif 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15143214) InterPro
MGI
PMID:15143214 GO_REF:0000002 NCBI chr19:24,913,474...24,964,803
Ensembl chr19:24,918,238...24,964,033
JBrowse link
G PTPN6 protein tyrosine phosphatase non-receptor type 6 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr11:6,977,480...6,994,525
Ensembl chr11:6,984,710...6,994,545
JBrowse link
G ZFP36L1 ZFP36 ring finger protein like 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr24:46,000,222...46,005,455
Ensembl chr24:45,999,623...46,006,218
JBrowse link
G ZFP36L2 ZFP36 ring finger protein like 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:64,019,633...64,022,301
Ensembl chr14:64,019,418...64,026,281
JBrowse link
regulation of CD4-positive, alpha-beta T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SH3RF1 SH3 domain containing ring finger 1 involved_in ISO (PMID:27084103) UniProt PMID:27084103 NCBI chr 7:115,330,171...115,504,443
Ensembl chr 7:115,332,460...115,504,411
JBrowse link
regulation of CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G KCNK18 potassium two pore domain channel subfamily K member 18 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:109,994,379...110,009,295
Ensembl chr 9:109,995,843...110,008,739
JBrowse link
regulation of CD8-positive, alpha-beta T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ZBTB7B zinc finger and BTB domain containing 7B acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr20:8,812,514...8,829,128
Ensembl chr20:8,812,351...8,817,286
JBrowse link
regulation of extrathymic T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PRDM1 PR/SET domain 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:67,695,436...67,719,487
Ensembl chr13:67,695,309...67,718,931
JBrowse link
G ZNF683 zinc finger protein 683 involved_in ISO (PMID:27102484) UniProt PMID:27102484 NCBI chr20:106,336,441...106,411,217 JBrowse link
regulation of gamma-delta T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EGR3 early growth response 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 8:20,767,219...20,772,838
Ensembl chr 8:20,767,224...20,772,682
JBrowse link
G RORC RAR related orphan receptor C acts_upstream_of_or_within ISO (PMID:21737317) MGI PMID:21737317 NCBI chr20:11,854,911...11,880,221
Ensembl chr20:11,855,005...11,879,717
JBrowse link
G SOX13 SRY-box transcription factor 13 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr25:25,220,341...25,275,981
Ensembl chr25:25,221,945...25,235,449
JBrowse link
G TCF7 transcription factor 7 involved_in ISO (PMID:23562159) UniProt PMID:23562159 NCBI chr23:36,919,648...36,953,088
Ensembl chr23:36,919,745...36,951,192
JBrowse link
regulation of immature T cell proliferation in thymus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CD1D CD1d molecule involved_in ISO (PMID:11550008) CACAO PMID:11550008 NCBI chr20:5,726,307...5,733,355
Ensembl chr20:5,727,049...5,730,061
JBrowse link
G TNFRSF9 TNF receptor superfamily member 9 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr20:123,808,289...123,839,957
Ensembl chr20:123,820,342...123,838,987
JBrowse link
G TNFSF9 TNF superfamily member 9 acts_upstream_of_or_within ISO (PMID:8405064) MGI PMID:8405064 NCBI chr 6:6,131,157...6,136,345
Ensembl chr 6:6,131,571...6,135,463
JBrowse link
regulation of lymphocyte differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G IKZF3 IKAROS family zinc finger 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:66,302,107...66,399,152
Ensembl chr16:66,303,117...66,397,765
JBrowse link
G NDFIP1 Nedd4 family interacting protein 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr23:44,737,432...44,783,409
Ensembl chr23:44,737,422...44,775,657
JBrowse link
G RNF41 ring finger protein 41 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr11:52,151,968...52,175,760
Ensembl chr11:52,141,715...52,175,728
JBrowse link
regulation of memory T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BCL6 BCL6 transcription repressor acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr15:81,997,659...82,022,059
Ensembl chr15:81,998,545...82,009,946
JBrowse link
regulation of natural killer cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC103242599 galectin-9 involved_in ISO (PMID:23408620) UniProt PMID:23408620 NCBI chr16:21,421,034...21,439,583 JBrowse link
G PRDM1 PR/SET domain 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:67,695,436...67,719,487
Ensembl chr13:67,695,309...67,718,931
JBrowse link
G ZNF683 zinc finger protein 683 involved_in ISO (PMID:27102484) UniProt PMID:27102484 NCBI chr20:106,336,441...106,411,217 JBrowse link
regulation of natural killer cell differentiation involved in immune response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ZNF683 zinc finger protein 683 involved_in ISO (PMID:22885984) UniProt PMID:22885984 NCBI chr20:106,336,441...106,411,217 JBrowse link
regulation of NK T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PRDM1 PR/SET domain 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:67,695,436...67,719,487
Ensembl chr13:67,695,309...67,718,931
JBrowse link
G ZNF683 zinc finger protein 683 involved_in ISO (PMID:27102484) UniProt PMID:27102484 NCBI chr20:106,336,441...106,411,217 JBrowse link
regulation of positive thymic T cell selection term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FOXN1 forkhead box N1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:22,291,597...22,306,977
Ensembl chr16:22,292,330...22,305,968
JBrowse link
G TOX thymocyte selection associated high mobility group box involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:54,777,490...55,086,819
Ensembl chr 8:54,776,015...54,927,091
JBrowse link
regulation of regulatory T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CD28 CD28 molecule acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr10:89,471,710...89,505,152
Ensembl chr10:89,471,730...89,500,387
JBrowse link
G DICER1 dicer 1, ribonuclease III acts_upstream_of_or_within ISO (PMID:18725527) MGI PMID:18725527 NCBI chr24:72,915,550...72,986,658
Ensembl chr24:72,915,499...72,963,006
JBrowse link
G DROSHA drosha ribonuclease III acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 4:30,665,759...30,807,047
Ensembl chr 4:30,665,131...30,795,442
JBrowse link
G FANCA FA complementation group A involved_in
acts_upstream_of_or_within
IEA TreeGrafter
Ensembl
GO_REF:0000107 GO_REF:0000118 NCBI chr 5:75,073,161...75,149,110
Ensembl chr 5:75,073,358...75,148,591
JBrowse link
G FANCD2 FA complementation group D2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr22:46,072,797...46,141,107
Ensembl chr22:46,072,761...46,140,713
JBrowse link
G KAT2A lysine acetyltransferase 2A involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:64,146,146...64,154,726
Ensembl chr16:64,146,207...64,154,252
JBrowse link
G LCK LCK proto-oncogene, Src family tyrosine kinase acts_upstream_of_or_within ISO (PMID:21245484) MGI PMID:21245484 NCBI chr20:100,582,718...100,618,041 JBrowse link
G LCK LCK proto-oncogene, Src family tyrosine kinase acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 Ensembl chr20:100,583,452...100,618,015 JBrowse link
G SH2B3 SH2B adaptor protein 3 ISO RGD PMID:25776069 RGD:13442483 NCBI chr11:106,657,601...106,703,940
Ensembl chr11:106,670,685...106,700,619
JBrowse link
G TGFB1 transforming growth factor beta 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 6:35,651,583...35,674,387
Ensembl chr 6:35,648,677...35,674,365
JBrowse link
regulation of T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABL1 ABL proto-oncogene 1, non-receptor tyrosine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:7,258,932...7,435,658
Ensembl chr12:7,256,648...7,312,734
JBrowse link
G ADA adenosine deaminase acts_upstream_of_or_within ISO (PMID:7670465) MGI PMID:7670465 NCBI chr 2:19,167,209...19,200,233 JBrowse link
G BRAF B-Raf proto-oncogene, serine/threonine kinase acts_upstream_of_or_within ISO (PMID:18228248) MGI PMID:18228248 NCBI chr21:109,495,525...109,690,261 JBrowse link
G BRAF B-Raf proto-oncogene, serine/threonine kinase acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 Ensembl chr21:109,545,491...109,690,195 JBrowse link
G CARD11 caspase recruitment domain family member 11 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 Ensembl chr28:18,675,524...18,715,388 JBrowse link
G CCR2 C-C motif chemokine receptor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:7,795,192...7,801,242
Ensembl chr22:7,798,646...7,799,728
JBrowse link
G CRTAM cytotoxic and regulatory T cell molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:114,233,767...114,265,780
Ensembl chr 1:114,234,357...114,265,994
JBrowse link
G CYP26B1 cytochrome P450 family 26 subfamily B member 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr14:35,030,011...35,057,164
Ensembl chr14:35,038,654...35,057,176
JBrowse link
G DUX4 double homeobox 4 acts_upstream_of_or_within ISO (PMID:17911620) MGI PMID:17911620
G IL15 interleukin 15 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 7:88,548,773...88,644,977
Ensembl chr 7:88,548,671...88,645,488
JBrowse link
G LOC103246958 caspase recruitment domain-containing protein 11 acts_upstream_of_or_within ISO (PMID:12867038) MGI PMID:12867038 NCBI chr28:18,657,941...18,714,202 JBrowse link
G METTL3 methyltransferase 3, N6-adenosine-methyltransferase complex catalytic subunit involved_in ISO (PMID:28792938) UniProt PMID:28792938 NCBI chr29:21,967,309...21,981,251
Ensembl chr29:21,963,982...21,981,579
JBrowse link
G MHC-DOA major histocompatibility complex, class II, DO alpha acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr17:39,084,785...39,090,477
Ensembl chr17:39,085,080...39,090,474
JBrowse link
G PRELID1 PRELI domain containing 1 involved_in ISO (PMID:18945965) UniProt PMID:18945965 NCBI chr23:79,313,442...79,316,788 JBrowse link
G RAG1 recombination activating 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:28,667,996...28,701,002 JBrowse link
G SLC46A2 solute carrier family 46 member 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr12:26,631,295...26,646,112
Ensembl chr12:26,633,493...26,646,038
JBrowse link
G TBX21 T-box transcription factor 21 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:68,131,258...68,145,579
Ensembl chr16:68,131,536...68,144,415
JBrowse link
regulation of T cell differentiation in thymus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADA adenosine deaminase ISO RGD PMID:3876160 RGD:152995412 NCBI chr 2:19,167,209...19,200,233 JBrowse link
G ADRM1 ADRM1 26S proteasome ubiquitin receptor involved_in ISO (PMID:21048919) BHF-UCL PMID:21048919 NCBI chr 2:1,930,281...1,936,323
Ensembl chr 2:1,925,382...1,936,393
JBrowse link
G ANKLE1 ankyrin repeat and LEM domain containing 1 NOT|involved_in ISO (PMID:27010503) UniProt PMID:27010503 NCBI chr 6:15,788,861...15,794,825
Ensembl chr 6:15,789,355...15,795,025
JBrowse link
G CLPTM1 CLPTM1 regulator of GABA type A receptor forward trafficking involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:38,416,268...38,452,578
Ensembl chr 6:38,415,788...38,452,679
JBrowse link
G FOXN1 forkhead box N1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr16:22,291,597...22,306,977
Ensembl chr16:22,292,330...22,305,968
JBrowse link
G LOC103242599 galectin-9 NOT|involved_in ISO (PMID:25065622) UniProt PMID:25065622 NCBI chr16:21,421,034...21,439,583 JBrowse link
G SOS1 SOS Ras/Rac guanine nucleotide exchange factor 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr14:68,259,509...68,404,167
Ensembl chr14:68,259,360...68,399,895
JBrowse link
G SOS2 SOS Ras/Rho guanine nucleotide exchange factor 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr24:27,183,571...27,302,201
Ensembl chr24:27,182,991...27,302,141
JBrowse link
G ZEB1 zinc finger E-box binding homeobox 1 acts_upstream_of_or_within ISO (PMID:9126927)
(PMID:9389660)
MGI PMID:9126927 PMID:9389660 NCBI chr 9:30,674,893...30,862,682
Ensembl chr 9:30,674,578...30,863,250
JBrowse link
regulation of T-helper 1 cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G IL27 interleukin 27 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr 5:26,348,559...26,358,028
Ensembl chr 5:26,348,848...26,356,360
JBrowse link
regulation of T-helper 17 cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CCL20 C-C motif chemokine ligand 20 NOT|involved_in ISO (PMID:19050256) UniProt PMID:19050256 NCBI chr10:113,815,099...113,836,562
Ensembl chr10:113,832,573...113,835,736
JBrowse link
G CCR6 C-C motif chemokine receptor 6 NOT|involved_in ISO (PMID:19050256) UniProt PMID:19050256 NCBI chr13:94,865,480...94,894,331
Ensembl chr13:94,865,936...94,894,315
JBrowse link
regulation of T-helper cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GATA3 GATA binding protein 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 9:8,101,404...8,122,762
Ensembl chr 9:8,101,432...8,123,064
JBrowse link
G LOC103221700 HLA class II histocompatibility antigen, DR beta 3 chain involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:39,471,058...39,484,265 JBrowse link
G LOC103247148 HLA class II histocompatibility antigen, DRB1 beta chain involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:39,556,020...39,564,488 JBrowse link
G LOC119618083 HLA class II histocompatibility antigen, DRB1 beta chain-like involved_in IEA Ensembl GO_REF:0000107
G MHC-DRA major histocompatibility complex, class II, DR alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:39,623,324...39,628,464
Ensembl chr17:39,622,402...39,629,261
JBrowse link
G ZBTB7B zinc finger and BTB domain containing 7B acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr20:8,812,514...8,829,128
Ensembl chr20:8,812,351...8,817,286
JBrowse link
regulatory T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CD28 CD28 molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:89,471,710...89,505,152
Ensembl chr10:89,471,730...89,500,387
JBrowse link
G FOXP3 forkhead box P3 involved_in
acts_upstream_of
ISO (PMID:32644293)
(PMID:16769892), (PMID:17028180)
UniProt
MGI
PMID:16769892 PMID:17028180 PMID:32644293 NCBI chr  X:46,349,890...46,365,133 JBrowse link
G FOXP3 forkhead box P3 involved_in
acts_upstream_of
IEA Ensembl GO_REF:0000107 Ensembl chr  X:46,346,754...46,356,928 JBrowse link
G TGFB1 transforming growth factor beta 1 acts_upstream_of_or_within
involved_in
IEA Ensembl GO_REF:0000107 NCBI chr 6:35,651,583...35,674,387
Ensembl chr 6:35,648,677...35,674,365
JBrowse link
G USP44 ubiquitin specific peptidase 44 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:90,915,107...90,950,142
Ensembl chr11:90,916,677...90,947,456
JBrowse link
T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADA adenosine deaminase acts_upstream_of ISO (PMID:7731963)
(PMID:9478961)
MGI PMID:7731963 PMID:9478961 NCBI chr 2:19,167,209...19,200,233 JBrowse link
G ASCL2 achaete-scute family bHLH transcription factor 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:2,075,629...2,080,462
Ensembl chr 1:2,076,851...2,077,432
JBrowse link
G BCL11A BCL11 transcription factor A acts_upstream_of_or_within ISO (PMID:12717432) MGI PMID:12717432 NCBI chr14:46,453,102...46,553,802 JBrowse link
G BCL2 BCL2 apoptosis regulator acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr18:16,440,560...16,643,187
Ensembl chr18:16,441,733...16,637,895
JBrowse link
G CACNB4 calcium voltage-gated channel auxiliary subunit beta 4 NOT|acts_upstream_of_or_within ISO (PMID:17028169) MGI PMID:17028169 NCBI chr10:37,240,749...37,518,174
Ensembl chr10:37,246,991...37,388,059
JBrowse link
G CD4 CD4 molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:6,824,797...6,856,440
Ensembl chr11:6,825,245...6,853,852
JBrowse link
G CHD7 chromodomain helicase DNA binding protein 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:56,654,939...56,782,803
Ensembl chr 8:56,657,826...56,785,804
JBrowse link
G CTNNB1 catenin beta 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr22:2,679,488...2,725,034
Ensembl chr22:2,684,022...2,723,949
JBrowse link
G DLL4 delta like canonical Notch ligand 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr26:42,056,473...42,066,283
Ensembl chr26:42,056,331...42,065,828
JBrowse link
G DTX1 deltex E3 ubiquitin ligase 1 acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr11:108,299,691...108,343,271
Ensembl chr11:108,300,193...108,342,738
JBrowse link
G EGR1 early growth response 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr23:41,139,636...41,143,598
Ensembl chr23:41,140,065...41,142,374
JBrowse link
G ENPP1 ectonucleotide pyrophosphatase/phosphodiesterase 1 involved_in ISO (PMID:23169635) MGI PMID:23169635 NCBI chr13:41,670,416...41,755,549 JBrowse link
G FOSL2 FOS like 2, AP-1 transcription factor subunit acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr14:79,201,128...79,222,363
Ensembl chr14:79,201,649...79,222,373
JBrowse link
G GATA3 GATA binding protein 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 9:8,101,404...8,122,762
Ensembl chr 9:8,101,432...8,123,064
JBrowse link
G GPR89A G protein-coupled receptor 89A involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:13,076,475...13,134,144 JBrowse link
G HMGA1 high mobility group AT-hook 1 acts_upstream_of_or_within ISO (PMID:15713121) MGI PMID:15713121 NCBI chr17:37,848,110...37,857,835
Ensembl chr17:37,849,412...37,853,880
JBrowse link
G IKZF1 IKAROS family zinc finger 1 acts_upstream_of_or_within ISO (PMID:7923373) MGI PMID:7923373 NCBI chr21:8,398,902...8,500,431
Ensembl chr21:8,402,719...8,484,723
JBrowse link
G IKZF3 IKAROS family zinc finger 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:66,302,107...66,399,152
Ensembl chr16:66,303,117...66,397,765
JBrowse link
G IL7R interleukin 7 receptor acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 4:34,701,724...34,724,241
Ensembl chr 4:34,701,531...34,721,361
JBrowse link
G ITPKB inositol-trisphosphate 3-kinase B acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr25:3,009,464...3,117,729
Ensembl chr25:3,009,353...3,118,235
JBrowse link
G ITPRIPL1 ITPRIP like 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr14:745,194...748,203
Ensembl chr14:745,331...750,727
JBrowse link
G JAG2 jagged canonical Notch ligand 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr24:83,050,412...83,081,982
Ensembl chr24:83,051,368...83,076,820
JBrowse link
G KAT7 lysine acetyltransferase 7 involved_in ISO (PMID:27733580) GO_Central PMID:27733580 NCBI chr16:43,508,888...43,548,411
Ensembl chr16:43,510,483...43,548,517
JBrowse link
G KDELR1 KDEL endoplasmic reticulum protein retention receptor 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 6:41,640,954...41,649,740
Ensembl chr 6:41,640,636...41,650,080
JBrowse link
G KIT KIT proto-oncogene, receptor tyrosine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:13,808,104...13,891,003
Ensembl chr 7:13,808,037...13,890,976
JBrowse link
G LCK LCK proto-oncogene, Src family tyrosine kinase involved_in ISO (PMID:1579166) UniProt PMID:1579166 NCBI chr20:100,582,718...100,618,041 JBrowse link
G LCK LCK proto-oncogene, Src family tyrosine kinase involved_in IEA Ensembl GO_REF:0000107 Ensembl chr20:100,583,452...100,618,015 JBrowse link
G LEP leptin involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:97,056,913...97,071,161
Ensembl chr21:97,057,529...97,071,220
JBrowse link
G LEPR leptin receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:67,454,205...67,567,524
Ensembl chr20:67,454,334...67,524,229
JBrowse link
G LFNG LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase involved_in ISO (PMID:19217325) UniProt PMID:19217325 NCBI chr28:19,084,527...19,092,305 JBrowse link
G LFNG LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase involved_in IEA Ensembl GO_REF:0000107 Ensembl chr28:19,082,864...19,091,900 JBrowse link
G LIPA lipase A, lysosomal acid type acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 9:82,639,220...82,677,479
Ensembl chr 9:82,638,621...82,677,488
JBrowse link
G LMBR1L limb development membrane protein 1 like involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:45,338,090...45,355,551
Ensembl chr11:45,337,977...45,355,812
JBrowse link
G LOC103241092 tyrosine-protein kinase ZAP-70 acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr14:1,403,294...1,430,205
Ensembl chr14:1,404,325...1,431,015
JBrowse link
G MUC19 mucin 19, oligomeric acts_upstream_of_or_within ISO (PMID:31539517) MGI PMID:31539517 NCBI chr11:36,679,954...36,829,714 JBrowse link
G NFATC3 nuclear factor of activated T cells 3 acts_upstream_of_or_within ISO (PMID:9768749) MGI PMID:9768749 NCBI chr 5:59,193,139...59,346,361 JBrowse link
G NFKBIZ NFKB inhibitor zeta involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:79,044,624...79,077,736
Ensembl chr22:79,044,619...79,055,776
JBrowse link
G NHEJ1 non-homologous end joining factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:104,981,313...105,071,828
Ensembl chr10:104,982,380...105,068,999
JBrowse link
G NRARP NOTCH regulated ankyrin repeat protein acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr12:888,636...891,269
Ensembl chr12:888,998...889,342
JBrowse link
G PATZ1 POZ/BTB and AT hook containing zinc finger 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr19:14,217,010...14,237,717
Ensembl chr19:14,215,918...14,237,579
JBrowse link
G PKNOX1 PBX/knotted 1 homeobox 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 2:86,857,155...86,882,365
Ensembl chr 2:86,856,632...86,881,550
JBrowse link
G PPP3CB protein phosphatase 3 catalytic subunit beta acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 9:57,782,256...57,841,307
Ensembl chr 9:57,782,304...57,844,573
JBrowse link
G PREX1 phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 2:15,152,001...15,354,556
Ensembl chr 2:15,152,096...15,354,544
JBrowse link
G PTPN2 protein tyrosine phosphatase non-receptor type 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:71,302,082...71,400,201
Ensembl chr18:71,310,577...71,345,960
JBrowse link
G PTPN22 protein tyrosine phosphatase non-receptor type 22 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr20:19,792,807...19,855,784
Ensembl chr20:19,793,083...19,855,827
JBrowse link
G PTPRC protein tyrosine phosphatase receptor type C involved_in IEA Ensembl GO_REF:0000107 NCBI chr25:30,655,014...30,777,367
Ensembl chr25:30,653,044...30,777,303
JBrowse link
G PTPRK protein tyrosine phosphatase receptor type K ISO RGD PMID:17434290 RGD:15036800 NCBI chr13:45,062,273...45,619,939
Ensembl chr13:45,062,342...45,619,929
JBrowse link
G RAG2 recombination activating 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:28,645,175...28,653,823
Ensembl chr 1:28,649,930...28,651,513
JBrowse link
G RHOH ras homolog family member H involved_in IEA Ensembl GO_REF:0000107 NCBI chr27:10,061,316...10,109,124
Ensembl chr27:10,062,014...10,062,589
JBrowse link
G RUNX2 RUNX family transcription factor 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr17:26,679,386...26,807,812
Ensembl chr17:26,683,175...26,807,319
JBrowse link
G SP3 Sp3 transcription factor acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr10:59,414,739...59,471,596
Ensembl chr10:59,416,152...59,470,456
JBrowse link
G TBX21 T-box transcription factor 21 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr16:68,131,258...68,145,579
Ensembl chr16:68,131,536...68,144,415
JBrowse link
G TCIRG1 T cell immune regulator 1, ATPase H+ transporting V0 subunit a3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:6,484,469...6,497,008
Ensembl chr 1:6,484,474...6,494,719
JBrowse link
G TGFB1 transforming growth factor beta 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 6:35,651,583...35,674,387
Ensembl chr 6:35,648,677...35,674,365
JBrowse link
G TRAF3IP2 TRAF3 interacting protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:62,272,893...62,320,096
Ensembl chr13:62,285,589...62,324,312
JBrowse link
G VAV1 vav guanine nucleotide exchange factor 1 acts_upstream_of_or_within ISO (PMID:21178006) MGI PMID:21178006 NCBI chr 6:6,337,255...6,415,851 JBrowse link
G VAV1 vav guanine nucleotide exchange factor 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 Ensembl chr 6:6,337,599...6,404,449 JBrowse link
G WNT10B Wnt family member 10B acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr11:45,205,728...45,229,050
Ensembl chr11:45,205,566...45,210,893
JBrowse link
T cell differentiation in thymus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADA adenosine deaminase acts_upstream_of ISO (PMID:11067867), (PMID:16670300)
(PMID:11435465)
(PMID:11067867), (PMID:12163459), (PMID:16670300)
MGI PMID:11067867 PMID:11435465 PMID:12163459 PMID:16670300 NCBI chr 2:19,167,209...19,200,233 JBrowse link
G ADAM17 ADAM metallopeptidase domain 17 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:98,092,093...98,157,657
Ensembl chr14:98,092,044...98,157,217
JBrowse link
G APC APC regulator of WNT signaling pathway acts_upstream_of_or_within ISO (PMID:16025118) MGI PMID:16025118 NCBI chr23:15,992,437...16,135,117
Ensembl chr23:16,042,287...16,137,067
JBrowse link
G B2M beta-2-microglobulin acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr26:38,331,818...38,338,785
Ensembl chr26:38,331,442...38,338,809
JBrowse link
G BCL11B BCL11 transcription factor B acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr24:77,122,591...77,222,562
Ensembl chr24:77,122,689...77,221,454
JBrowse link
G BCL2 BCL2 apoptosis regulator acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr18:16,440,560...16,643,187
Ensembl chr18:16,441,733...16,637,895
JBrowse link
G BRAF B-Raf proto-oncogene, serine/threonine kinase acts_upstream_of_or_within ISO (PMID:23334952) MGI PMID:23334952 NCBI chr21:109,495,525...109,690,261 JBrowse link
G BRAF B-Raf proto-oncogene, serine/threonine kinase acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 Ensembl chr21:109,545,491...109,690,195 JBrowse link
G CD3E CD3e molecule ISO RGD PMID:11896936 RGD:2313407 NCBI chr 1:109,681,142...109,692,835
Ensembl chr 1:109,681,065...109,692,839
JBrowse link
G CDK6 cyclin dependent kinase 6 acts_upstream_of_or_within ISO (PMID:21508411) MGI PMID:21508411 NCBI chr21:56,167,731...56,403,976
Ensembl chr21:56,170,450...56,393,808
JBrowse link
G CTNNB1 catenin beta 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr22:2,679,488...2,725,034
Ensembl chr22:2,684,022...2,723,949
JBrowse link
G DNAJA3 DnaJ heat shock protein family (Hsp40) member A3 acts_upstream_of_or_within ISO (PMID:15879105) MGI PMID:15879105 NCBI chr 5:4,109,612...4,139,789 JBrowse link
G DNAJA3 DnaJ heat shock protein family (Hsp40) member A3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 Ensembl chr 5:4,109,577...4,137,926 JBrowse link
G FADD Fas associated via death domain involved_in ISO (PMID:21876153) UniProt PMID:21876153 NCBI chr 1:4,358,314...4,361,863 JBrowse link
G FZD5 frizzled class receptor 5 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr10:93,545,792...93,553,092
Ensembl chr10:93,550,189...93,551,946
JBrowse link
G FZD7 frizzled class receptor 7 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr10:87,734,263...87,738,676
Ensembl chr10:87,734,872...87,736,596
JBrowse link
G FZD8 frizzled class receptor 8 acts_upstream_of_or_within ISO (PMID:11265645) MGI PMID:11265645 NCBI chr 9:34,918,916...34,922,687 JBrowse link
G GATA3 GATA binding protein 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 9:8,101,404...8,122,762
Ensembl chr 9:8,101,432...8,123,064
JBrowse link
G GBA1 glucosylceramidase beta 1 acts_upstream_of_or_within ISO (PMID:22665763) MGI PMID:22665763 NCBI chr20:8,598,110...8,631,517
Ensembl chr20:8,598,628...8,630,990
JBrowse link
G GLI3 GLI family zinc finger 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15855276) Ensembl
MGI
PMID:15855276 GO_REF:0000107 NCBI chr21:16,386,700...16,665,648
Ensembl chr21:16,549,789...16,662,238
JBrowse link
G IL2RG interleukin 2 receptor subunit gamma acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr  X:60,905,011...60,915,723
Ensembl chr  X:60,905,343...60,909,149
JBrowse link
G IL7R interleukin 7 receptor acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr 4:34,701,724...34,724,241
Ensembl chr 4:34,701,531...34,721,361
JBrowse link
G JMJD6 jumonji domain containing 6, arginine demethylase and lysine hydroxylase acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr16:44,955,617...44,970,136
Ensembl chr16:44,955,778...44,970,133
JBrowse link
G LOC103230489 major histocompatibility complex class I-related gene protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr25:48,348,439...48,370,242
Ensembl chr25:48,348,196...48,369,483
JBrowse link
G LOC103243413 signal transducer and activator of transcription 5B acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr16:63,997,486...64,070,392
Ensembl chr16:63,997,441...64,070,445
JBrowse link
G LOC119623630 lysosomal acid glucosylceramidase acts_upstream_of_or_within IEA Ensembl GO_REF:0000107
G MAFB MAF bZIP transcription factor B acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 2:23,092,547...23,097,721
Ensembl chr 2:23,094,713...23,095,684
JBrowse link
G MPZL2 myelin protein zero like 2 acts_upstream_of_or_within ISO (PMID:19851463) MGI PMID:19851463 NCBI chr 1:109,635,053...109,645,142
Ensembl chr 1:109,633,493...109,645,145
JBrowse link
G NCAPH2 non-SMC condensin II complex subunit H2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr19:32,978,771...32,995,055
Ensembl chr19:32,978,562...32,997,160
JBrowse link
G NCOR1 nuclear receptor corepressor 1 acts_upstream_of_or_within ISO (PMID:11030619) MGI PMID:11030619 NCBI chr16:15,442,315...15,629,411
Ensembl chr16:15,462,640...15,628,512
JBrowse link
G NFKBID NFKB inhibitor delta acts_upstream_of ISO (PMID:11931770) MGI PMID:11931770 NCBI chr 6:30,800,122...30,812,991
Ensembl chr 6:30,799,204...30,811,141
JBrowse link
G NKAP NFKB activating protein acts_upstream_of_or_within ISO (PMID:20610818) MGI PMID:20610818
G PRKDC protein kinase, DNA-activated, catalytic subunit acts_upstream_of_or_within ISO (PMID:9768755) MGI PMID:9768755 NCBI chr 8:43,915,226...44,119,547
Ensembl chr 8:43,914,636...44,119,541
JBrowse link
G PRR7 proline rich 7, synaptic involved_in IEA Ensembl GO_REF:0000107 NCBI chr23:79,458,347...79,467,421
Ensembl chr23:79,466,186...79,467,257
JBrowse link
G PSMB11 proteasome subunit beta 11 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr29:23,410,583...23,413,099
Ensembl chr29:23,411,557...23,412,459
JBrowse link
G RABL3 RAB, member of RAS oncogene family like 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:60,095,013...60,133,189
Ensembl chr22:60,095,066...60,136,337
JBrowse link
G RAG1 recombination activating 1 involved_in
acts_upstream_of_or_within
IEA UniProt
Ensembl
GO_REF:0000104 GO_REF:0000107 NCBI chr 1:28,667,996...28,701,002 JBrowse link
G RAG2 recombination activating 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:28,645,175...28,653,823
Ensembl chr 1:28,649,930...28,651,513
JBrowse link
G RIPK3 receptor interacting serine/threonine kinase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr24:1,318,265...1,322,610
Ensembl chr24:1,318,216...1,322,462
JBrowse link
G RORC RAR related orphan receptor C acts_upstream_of_or_within ISO (PMID:15247480) MGI PMID:15247480 NCBI chr20:11,854,911...11,880,221
Ensembl chr20:11,855,005...11,879,717
JBrowse link
G RPS6 ribosomal protein S6 acts_upstream_of_or_within ISO (PMID:16357222) MGI PMID:16357222 NCBI chr12:60,353,800...60,357,797
Ensembl chr12:60,353,817...60,357,759
JBrowse link
G SHH sonic hedgehog signaling molecule acts_upstream_of
involved_in
IEA
ISO
(PMID:19273836) Ensembl
BHF-UCL
PMID:19273836 GO_REF:0000107 NCBI chr21:123,929,937...123,942,451
Ensembl chr21:123,932,900...123,942,395
JBrowse link
G STAT5A signal transducer and activator of transcription 5A acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr16:63,959,265...63,986,627
Ensembl chr16:63,960,515...63,985,026
JBrowse link
G TCF3 transcription factor 3 acts_upstream_of_or_within ISO (PMID:18958875) MGI PMID:18958875 NCBI chr 6:1,393,147...1,440,515
Ensembl chr 6:1,393,107...1,440,479
JBrowse link
G TESPA1 thymocyte expressed, positive selection associated 1 acts_upstream_of ISO (PMID:28598420) MGI PMID:28598420 NCBI chr11:51,044,269...51,079,210
Ensembl chr11:51,042,095...51,070,939
JBrowse link
G TP53 tumor protein p53 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr16:7,047,686...7,065,567
Ensembl chr16:7,045,146...7,066,223
JBrowse link
G WNT1 Wnt family member 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr11:45,217,402...45,222,996
Ensembl chr11:45,219,027...45,222,017
JBrowse link
G WNT4 Wnt family member 4 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr20:110,517,391...110,543,802
Ensembl chr20:110,517,564...110,541,203
JBrowse link
G ZBTB1 zinc finger and BTB domain containing 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr24:41,712,721...41,738,853
Ensembl chr24:41,712,114...41,740,654
JBrowse link
G ZFP36L1 ZFP36 ring finger protein like 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr24:46,000,222...46,005,455
Ensembl chr24:45,999,623...46,006,218
JBrowse link
G ZFP36L2 ZFP36 ring finger protein like 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:64,019,633...64,022,301
Ensembl chr14:64,019,418...64,026,281
JBrowse link
T cell differentiation involved in immune response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CLEC4D C-type lectin domain family 4 member D acts_upstream_of_or_within ISO (PMID:23602766) MGI PMID:23602766 NCBI chr11:8,294,999...8,303,866 JBrowse link
G CLEC4D C-type lectin domain family 4 member D acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 Ensembl chr11:8,297,155...8,302,780 JBrowse link
G CLEC4E C-type lectin domain family 4 member E acts_upstream_of_or_within ISO (PMID:23602766) MGI PMID:23602766 NCBI chr11:8,315,888...8,322,240
Ensembl chr11:8,316,049...8,321,274
JBrowse link
G FCER1G Fc fragment of IgE receptor Ig involved_in
acts_upstream_of_or_within
IEA TreeGrafter
Ensembl
GO_REF:0000107 GO_REF:0000118 NCBI chr20:2,763,412...2,767,774
Ensembl chr20:2,763,417...2,767,248
JBrowse link
G SEMA4A semaphorin 4A involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:7,684,107...7,716,866
Ensembl chr20:7,683,994...7,708,741
JBrowse link
T cell lineage commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BCL2 BCL2 apoptosis regulator acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr18:16,440,560...16,643,187
Ensembl chr18:16,441,733...16,637,895
JBrowse link
G FOXN1 forkhead box N1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:22,291,597...22,306,977
Ensembl chr16:22,292,330...22,305,968
JBrowse link
G IL7 interleukin 7 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 8:74,230,493...74,292,985
Ensembl chr 8:74,231,809...74,292,384
JBrowse link
G PRKDC protein kinase, DNA-activated, catalytic subunit acts_upstream_of_or_within ISO (PMID:8788039) MGI PMID:8788039 NCBI chr 8:43,915,226...44,119,547
Ensembl chr 8:43,914,636...44,119,541
JBrowse link
G RAG2 recombination activating 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:28,645,175...28,653,823
Ensembl chr 1:28,649,930...28,651,513
JBrowse link
G TP53 tumor protein p53 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr16:7,047,686...7,065,567
Ensembl chr16:7,045,146...7,066,223
JBrowse link
T cell receptor V(D)J recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BCL11B BCL11 transcription factor B acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr24:77,122,591...77,222,562
Ensembl chr24:77,122,689...77,221,454
JBrowse link
G LEF1 lymphoid enhancer binding factor 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 7:55,974,770...56,096,214
Ensembl chr 7:55,990,621...56,094,110
JBrowse link
G LIG4 DNA ligase 4 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 3:86,576,200...86,587,097
Ensembl chr 3:86,577,304...86,580,039
JBrowse link
G PRKDC protein kinase, DNA-activated, catalytic subunit acts_upstream_of_or_within ISO (PMID:9768755) MGI PMID:9768755 NCBI chr 8:43,915,226...44,119,547
Ensembl chr 8:43,914,636...44,119,541
JBrowse link
G TCF7 transcription factor 7 acts_upstream_of_or_within ISO (PMID:9462507) MGI PMID:9462507 NCBI chr23:36,919,648...36,953,088
Ensembl chr23:36,919,745...36,951,192
JBrowse link
T cell selection term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CD4 CD4 molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:6,824,797...6,856,440
Ensembl chr11:6,825,245...6,853,852
JBrowse link
T follicular helper cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASCL2 achaete-scute family bHLH transcription factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:2,075,629...2,080,462
Ensembl chr 1:2,076,851...2,077,432
JBrowse link
G FOXP1 forkhead box P1 involved_in ISO (PMID:24859450) UniProt PMID:24859450 NCBI chr22:31,907,941...32,538,294
Ensembl chr22:31,912,460...32,154,502
JBrowse link
G GPR183 G protein-coupled receptor 183 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:77,952,689...77,966,317
Ensembl chr 3:77,953,212...77,954,297
JBrowse link
G ICOS inducible T cell costimulator involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:89,706,755...89,732,600
Ensembl chr10:89,726,489...89,732,944
JBrowse link
G ICOSLG inducible T cell costimulator ligand involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:87,974,651...87,986,867
Ensembl chr 2:87,973,786...87,986,639
JBrowse link
G IL21 interleukin 21 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:69,859,793...69,872,237
Ensembl chr 7:69,863,535...69,872,025
JBrowse link
G IL6 interleukin 6 involved_in ISO (PMID:23045607) UniProt PMID:23045607 NCBI chr21:35,577,513...35,582,385
Ensembl chr21:35,577,939...35,582,237
JBrowse link
G LOC103230557 roquin-1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr25:55,167,418...55,258,964
Ensembl chr25:55,167,077...55,279,088
JBrowse link
G PIK3R1 phosphoinositide-3-kinase regulatory subunit 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:64,321,296...64,406,188
Ensembl chr 4:64,321,078...64,406,519
JBrowse link
G RC3H2 ring finger and CCCH-type domains 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr12:15,230,206...15,283,253
Ensembl chr12:15,238,124...15,280,689
JBrowse link
G TBK1 TANK binding kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:60,136,162...60,182,354
Ensembl chr11:60,136,232...60,182,344
JBrowse link
T-helper 1 cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CRACR2A calcium release activated channel regulator 2A involved_in ISO (PMID:29987160) UniProt PMID:29987160 NCBI chr11:3,659,745...3,815,742
Ensembl chr11:3,667,647...3,743,026
JBrowse link
G HLX H2.0 like homeobox acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr25:8,641,386...8,647,485
Ensembl chr25:8,641,752...8,646,563
JBrowse link
G HMGB1 high mobility group box 1 involved_in ISO (PMID:15944249) UniProt PMID:15944249 NCBI chr 3:9,353,333...9,357,765 JBrowse link
G IL18R1 interleukin 18 receptor 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr14:6,026,683...6,067,808
Ensembl chr14:6,026,443...6,066,884
JBrowse link
G IL4R interleukin 4 receptor acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr 5:25,019,638...25,069,732
Ensembl chr 5:25,046,701...25,070,015
JBrowse link
G LEF1 lymphoid enhancer binding factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:55,974,770...56,096,214
Ensembl chr 7:55,990,621...56,094,110
JBrowse link
G NFKBIZ NFKB inhibitor zeta involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:79,044,624...79,077,736
Ensembl chr22:79,044,619...79,055,776
JBrowse link
G RELB RELB proto-oncogene, NF-kB subunit acts_upstream_of_or_within ISO (PMID:16081776) MGI PMID:16081776 NCBI chr 6:38,463,414...38,500,487 JBrowse link
G RELB RELB proto-oncogene, NF-kB subunit acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 Ensembl chr 6:38,464,860...38,500,591 JBrowse link
G SEMA4A semaphorin 4A involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:7,684,107...7,716,866
Ensembl chr20:7,683,994...7,708,741
JBrowse link
G STAT4 signal transducer and activator of transcription 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:76,553,626...76,708,540
Ensembl chr10:76,553,606...76,674,928
JBrowse link
G TMEM98 transmembrane protein 98 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:26,468,148...26,481,681
Ensembl chr16:26,468,419...26,481,025
JBrowse link
T-helper 1 cell lineage commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G IL4 interleukin 4 acts_upstream_of_or_within ISO (PMID:20706986) MGI PMID:20706986 NCBI chr23:35,492,158...35,501,349
Ensembl chr23:35,492,939...35,501,258
JBrowse link
G MTOR mechanistic target of rapamycin kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:120,522,667...120,678,988
Ensembl chr20:120,525,737...120,679,020
JBrowse link
G SPN sialophorin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:26,987,810...26,990,214 JBrowse link
G STAT6 signal transducer and activator of transcription 6 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr11:53,005,378...53,020,899
Ensembl chr11:53,006,145...53,021,203
JBrowse link
G TBX21 T-box transcription factor 21 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:68,131,258...68,145,579
Ensembl chr16:68,131,536...68,144,415
JBrowse link
T-helper 17 cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BATF basic leucine zipper ATF-like transcription factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr24:52,761,569...52,785,999
Ensembl chr24:52,761,651...52,785,978
JBrowse link
G ENTPD7 ectonucleoside triphosphate diphosphohydrolase 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:92,722,960...92,769,563
Ensembl chr 9:92,723,015...92,768,558
JBrowse link
G NFKBIZ NFKB inhibitor zeta involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:79,044,624...79,077,736
Ensembl chr22:79,044,619...79,055,776
JBrowse link
G RORA RAR related orphan receptor A involved_in IEA Ensembl GO_REF:0000107 NCBI chr26:22,263,889...23,002,224
Ensembl chr26:22,812,445...22,993,021
JBrowse link
G RORC RAR related orphan receptor C involved_in
acts_upstream_of_or_within
ISO (PMID:20383124)
(PMID:18792410)
(PMID:16990136), (PMID:18164222)
MGI
UniProt
PMID:16990136 PMID:18164222 PMID:18792410 PMID:20383124 NCBI chr20:11,854,911...11,880,221
Ensembl chr20:11,855,005...11,879,717
JBrowse link
T-helper 17 cell lineage commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BATF basic leucine zipper ATF-like transcription factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr24:52,761,569...52,785,999
Ensembl chr24:52,761,651...52,785,978
JBrowse link
G IL6 interleukin 6 involved_in ISO (PMID:27893700)
(PMID:16990136)
UniProt PMID:16990136 PMID:27893700 NCBI chr21:35,577,513...35,582,385
Ensembl chr21:35,577,939...35,582,237
JBrowse link
G IL6R interleukin 6 receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:9,345,723...9,418,963
Ensembl chr20:9,361,152...9,396,610
JBrowse link
G IRF4 interferon regulatory factor 4 involved_in ISO (PMID:22983707) UniProt PMID:22983707 NCBI chr17:71,739,920...71,758,811 JBrowse link
G IRF4 interferon regulatory factor 4 involved_in IEA Ensembl GO_REF:0000107 Ensembl chr17:71,751,770...71,757,496 JBrowse link
G LY9 lymphocyte antigen 9 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:3,140,059...3,145,818 JBrowse link
G OTUD5 OTU deubiquitinase 5 acts_upstream_of_or_within ISO (PMID:25470037) MGI PMID:25470037 NCBI chr  X:46,041,348...46,077,195 JBrowse link
G SLAMF6 SLAM family member 6 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr20:3,426,868...3,465,553
Ensembl chr20:3,453,370...3,463,901
JBrowse link
G STAT3 signal transducer and activator of transcription 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:63,877,884...63,957,894
Ensembl chr16:63,922,862...63,957,984
JBrowse link
T-helper 2 cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BATF basic leucine zipper ATF-like transcription factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr24:52,761,569...52,785,999
Ensembl chr24:52,761,651...52,785,978
JBrowse link
G BCL3 BCL3 transcription coactivator acts_upstream_of_or_within ISO (PMID:16081776) MGI PMID:16081776 NCBI chr 6:38,228,137...38,243,767 JBrowse link
G BCL3 BCL3 transcription coactivator acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 Ensembl chr 6:38,229,459...38,244,150 JBrowse link
G BCL6 BCL6 transcription repressor acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr15:81,997,659...82,022,059
Ensembl chr15:81,998,545...82,009,946
JBrowse link
G GATA3 GATA binding protein 3 involved_in
acts_upstream_of_or_within
IEA Ensembl GO_REF:0000107 NCBI chr 9:8,101,404...8,122,762
Ensembl chr 9:8,101,432...8,123,064
JBrowse link
G HLX H2.0 like homeobox acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr25:8,641,386...8,647,485
Ensembl chr25:8,641,752...8,646,563
JBrowse link
G IL4 interleukin 4 acts_upstream_of_or_within ISO (PMID:20706986) MGI PMID:20706986 NCBI chr23:35,492,158...35,501,349
Ensembl chr23:35,492,939...35,501,258
JBrowse link
G IL4R interleukin 4 receptor acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr 5:25,019,638...25,069,732
Ensembl chr 5:25,046,701...25,070,015
JBrowse link
G IL6 interleukin 6 acts_upstream_of ISO (PMID:12594267) MGI PMID:12594267 NCBI chr21:35,577,513...35,582,385
Ensembl chr21:35,577,939...35,582,237
JBrowse link
G KMT2A lysine methyltransferase 2A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:109,819,748...109,912,763
Ensembl chr 1:109,853,758...109,908,113
JBrowse link
G MEN1 menin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:9,423,885...9,431,123
Ensembl chr 1:9,423,917...9,431,104
JBrowse link
G MYB MYB proto-oncogene, transcription factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:38,203,923...38,242,148
Ensembl chr13:38,203,731...38,241,864
JBrowse link
T-helper cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATP7A ATPase copper transporting alpha acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr  X:66,843,519...66,985,655
Ensembl chr  X:66,843,558...66,985,709
JBrowse link
G IL12B interleukin 12B involved_in IEA Ensembl GO_REF:0000107 NCBI chr23:61,714,293...61,731,835 JBrowse link
G PDP2 pyruvate dehyrogenase phosphatase catalytic subunit 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:52,575,280...52,583,614
Ensembl chr 5:52,580,423...52,582,009
JBrowse link
G PTGER4 prostaglandin E receptor 4 involved_in ISO (PMID:19465928) UniProt PMID:19465928 NCBI chr 4:39,440,697...39,453,983
Ensembl chr 4:39,440,276...39,454,004
JBrowse link
G RORC RAR related orphan receptor C involved_in ISO (PMID:14691482) UniProt PMID:14691482 NCBI chr20:11,854,911...11,880,221
Ensembl chr20:11,855,005...11,879,717
JBrowse link
thymic T cell selection term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CARD11 caspase recruitment domain family member 11 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 Ensembl chr28:18,675,524...18,715,388 JBrowse link
G GATA3 GATA binding protein 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 9:8,101,404...8,122,762
Ensembl chr 9:8,101,432...8,123,064
JBrowse link
G ITPKB inositol-trisphosphate 3-kinase B acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr25:3,009,464...3,117,729
Ensembl chr25:3,009,353...3,118,235
JBrowse link
G JAG2 jagged canonical Notch ligand 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr24:83,050,412...83,081,982
Ensembl chr24:83,051,368...83,076,820
JBrowse link
G LOC103241092 tyrosine-protein kinase ZAP-70 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr14:1,403,294...1,430,205
Ensembl chr14:1,404,325...1,431,015
JBrowse link
G LOC103246958 caspase recruitment domain-containing protein 11 acts_upstream_of_or_within ISO (PMID:12867038) MGI PMID:12867038 NCBI chr28:18,657,941...18,714,202 JBrowse link
transitional one stage B cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABL1 ABL proto-oncogene 1, non-receptor tyrosine kinase acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr12:7,258,932...7,435,658
Ensembl chr12:7,256,648...7,312,734
JBrowse link
G TNFSF13B TNF superfamily member 13b acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 3:86,637,988...86,675,774
Ensembl chr 3:86,638,302...86,675,772
JBrowse link
transitional two stage B cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TRAF3IP2 TRAF3 interacting protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:62,272,893...62,320,096
Ensembl chr13:62,285,589...62,324,312
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19829
    immune system process 2687
      leukocyte activation 1043
        lymphocyte activation 854
          lymphocyte differentiation 459
            B cell differentiation + 163
            T cell differentiation + 340
            natural killer cell differentiation + 37
            negative regulation of lymphocyte differentiation + 66
            positive regulation of lymphocyte differentiation + 127
            regulation of lymphocyte differentiation + 216
Path 2
Term Annotations click to browse term
  biological_process 19829
    developmental process 6875
      cellular developmental process 4609
        cell differentiation 4608
          cell development 3290
            hemopoiesis 1062
              leukocyte differentiation 690
                mononuclear cell differentiation 560
                  lymphocyte differentiation 459
                    B cell differentiation + 163
                    T cell differentiation + 340
                    natural killer cell differentiation + 37
                    negative regulation of lymphocyte differentiation + 66
                    positive regulation of lymphocyte differentiation + 127
                    regulation of lymphocyte differentiation + 216
paths to the root