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ONTOLOGY REPORT - ANNOTATIONS

Term:lymphocyte differentiation
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Accession:GO:0030098 term browser browse the term
Definition:The process in which a relatively unspecialized precursor cell acquires specialized features of a lymphocyte. A lymphocyte is a leukocyte commonly found in the blood and lymph that has the characteristics of a large nucleus, a neutral staining cytoplasm, and prominent heterochromatin.
Comment:Note that immunologists typically use the word 'development' to refer to cells of B or T cell lineages undergoing the process that GO describes as 'cell differentiation'.
Synonyms:exact_synonym: lymphocyte cell differentiation;   lymphocytic blood cell differentiation
 related_synonym: lymphocyte development
 alt_id: GO:0046650


show annotations for term's descendants           Sort by:
lymphocyte differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CBFB core-binding factor subunit beta acts_upstream_of_or_within ISO (PMID:12434155) MGI PMID:12434155 NCBI chr16:47,373,543...47,446,783 JBrowse link
G FBXO7 F-box protein 7 acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr22:13,481,255...13,505,301
Ensembl chr22:31,335,423...31,359,224 		JBrowse link
G FLT3 fms related receptor tyrosine kinase 3 acts_upstream_of_or_within ISO (PMID:12387740) MGI PMID:12387740 NCBI chr13:9,283,747...9,381,553
Ensembl chr13:27,627,178...27,723,940 		JBrowse link
G FLT3LG fms related receptor tyrosine kinase 3 ligand acts_upstream_of_or_within ISO (PMID:12387740) MGI PMID:12387740 NCBI chr19:46,486,169...46,499,008 JBrowse link
G IKZF1 IKAROS family zinc finger 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:50,946,817...51,047,168
Ensembl chr 7:51,191,685...51,291,245 		JBrowse link
G IL2RG interleukin 2 receptor subunit gamma acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr  X:60,375,815...60,386,936
Ensembl chr  X:70,433,360...70,437,590 		JBrowse link
G LOC100988550 signal transducer and activator of transcription 5A acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr17:15,005,025...15,029,110
Ensembl chr17:15,228,465...15,251,783 		JBrowse link
G LOC100989105 signal transducer and activator of transcription 5B acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr17:15,040,303...15,116,682
Ensembl chr17:15,306,418...15,336,463 		JBrowse link
G LY6D lymphocyte antigen 6 family member D involved_in IEA InterPro
TreeGrafter
Ensembl		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr 8:139,497,413...139,499,182
Ensembl chr 8:142,540,251...142,542,207 		JBrowse link
G PRKDC protein kinase, DNA-activated, catalytic subunit acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 8:44,201,391...44,386,803
Ensembl chr 8:41,593,029...41,778,299 		JBrowse link
G RELB RELB proto-oncogene, NF-kB subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:41,948,559...41,987,121
Ensembl chr19:50,554,864...50,590,223 		JBrowse link
G SPI1 Spi-1 proto-oncogene acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr11:47,301,245...47,326,891
Ensembl chr11:47,853,991...47,880,259 		JBrowse link
G TCF3 transcription factor 3 acts_upstream_of_or_within ISO (PMID:18958875) MGI PMID:18958875 Ensembl chr19:1,582,297...1,622,025 JBrowse link
G TOX thymocyte selection associated high mobility group box acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 8:55,246,933...55,553,839
Ensembl chr 8:56,922,773...57,219,410 		JBrowse link
alpha-beta T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABL1 ABL proto-oncogene 1, non-receptor tyrosine kinase acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 9:101,834,189...102,005,811
Ensembl chr 9:130,484,333...130,652,941 		JBrowse link
G ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase acts_upstream_of_or_within ISO (PMID:18025176) MGI PMID:18025176 NCBI chr 1:154,586,423...154,711,621
Ensembl chr 1:158,280,994...158,313,915 		JBrowse link
G ADA adenosine deaminase acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr20:40,950,238...40,982,481
Ensembl chr20:42,044,613...42,076,868 		JBrowse link
G ANXA1 annexin A1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:51,647,404...51,665,990
Ensembl chr 9:71,929,728...71,948,779 		JBrowse link
G BCL11B BCL11 transcription factor B acts_upstream_of_or_within ISO (PMID:12717433) MGI PMID:12717433 NCBI chr14:79,795,262...79,898,472 JBrowse link
G BLM BLM RecQ like helicase acts_upstream_of_or_within ISO (PMID:17210642) MGI PMID:17210642 NCBI chr15:69,407,248...69,508,070
Ensembl chr15:88,607,157...88,707,864 		JBrowse link
G BRAF B-Raf proto-oncogene, serine/threonine kinase acts_upstream_of_or_within ISO (PMID:23334952) MGI PMID:23334952 NCBI chr 7:132,651,908...132,855,422
Ensembl chr 7:145,138,510...145,327,115 		JBrowse link
G GLI3 GLI family zinc finger 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 7:42,004,965...42,280,772
Ensembl chr 7:42,056,565...42,322,865 		JBrowse link
G LEF1 lymphoid enhancer binding factor 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 4:100,552,959...100,674,156
Ensembl chr 4:111,125,312...111,245,980 		JBrowse link
G LOC100971372 tyrosine-protein kinase ZAP-70 acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr2A:101,582,567...101,613,175
Ensembl chr2A:98,613,740...98,639,088 		JBrowse link
G PRR7 proline rich 7, synaptic involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:172,748,020...172,757,989
Ensembl chr 5:179,818,184...179,821,479 		JBrowse link
G PTCRA pre T cell antigen receptor alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:42,504,369...42,514,837
Ensembl chr 6:43,799,778...43,811,882 		JBrowse link
G RORC RAR related orphan receptor C acts_upstream_of_or_within ISO (PMID:15247480) MGI PMID:15247480 NCBI chr 1:127,164,725...127,190,479
Ensembl chr 1:130,808,705...130,834,490 		JBrowse link
G RPL22 ribosomal protein L22 acts_upstream_of_or_within ISO (PMID:17555992) MGI PMID:17555992 NCBI chr 1:4,952,104...4,966,761
Ensembl chr 1:6,207,507...6,219,947 		JBrowse link
G SHH sonic hedgehog signaling molecule acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr 7:147,400,112...147,414,036
Ensembl chr 7:159,114,666...159,126,651 		JBrowse link
G TCF7 transcription factor 7 acts_upstream_of_or_within ISO (PMID:9462507) MGI PMID:9462507 NCBI chr 5:129,518,134...129,549,972
Ensembl chr 5:135,671,095...135,702,734 		JBrowse link
alpha-beta T cell lineage commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RHOA ras homolog family member A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:49,282,009...49,339,887 JBrowse link
B cell affinity maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BTK Bruton tyrosine kinase acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr  X:90,551,874...90,588,786
Ensembl chr  X:100,684,017...100,725,187 		JBrowse link
G TRAF3IP2 TRAF3 interacting protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:109,367,333...109,414,601
Ensembl chr 6:113,444,005...113,485,533 		JBrowse link
B cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADAM17 ADAM metallopeptidase domain 17 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2A:9,478,080...9,545,363
Ensembl chr2A:9,641,201...9,708,054 		JBrowse link
G ADGRG3 adhesion G protein-coupled receptor G3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:37,945,248...37,966,293
Ensembl chr16:57,077,429...57,098,456 		JBrowse link
G AQP8 aquaporin 8 involved_in IEA Ensembl GO_REF:0000107 Ensembl chr16:25,458,165...25,469,713 JBrowse link
G BCL11A BCL11 transcription factor A acts_upstream_of_or_within ISO (PMID:12717432) MGI PMID:12717432 NCBI chr2A:60,552,908...60,655,437
Ensembl chr2A:61,695,613...61,795,800 		JBrowse link
G BCL2 BCL2 apoptosis regulator acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr18:56,481,212...56,679,012
Ensembl chr18:59,802,443...59,992,100 		JBrowse link
G BCL6 BCL6 transcription repressor acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 3:184,748,135...184,772,375
Ensembl chr 3:193,308,296...193,332,124 		JBrowse link
G CARD11 caspase recruitment domain family member 11 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 7:3,166,788...3,304,729
Ensembl chr 7:3,258,736...3,332,999 		JBrowse link
G CD40LG CD40 ligand acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr  X:125,776,138...125,788,820
Ensembl chr  X:136,042,849...136,058,202 		JBrowse link
G CD79A CD79a molecule involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr19:38,765,067...38,769,556
Ensembl chr19:47,270,377...47,274,711 		JBrowse link
G CD79B CD79b molecule involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr17:58,022,375...58,026,359
Ensembl chr17:63,116,722...63,120,335 		JBrowse link
G CDH17 cadherin 17 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:90,750,904...90,818,629
Ensembl chr 8:92,696,182...92,760,732 		JBrowse link
G CEBPG CCAAT enhancer binding protein gamma involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:30,295,603...30,304,984
Ensembl chr19:39,046,219...39,046,671 		JBrowse link
G CLCF1 cardiotrophin like cytokine factor 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr11:62,722,611...62,734,279 JBrowse link
G CR2 complement C3d receptor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:183,052,798...183,088,385
Ensembl chr 1:187,330,483...187,366,069 		JBrowse link
G DCAF1 DDB1 and CUL4 associated factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:51,326,589...51,430,217
Ensembl chr 3:52,560,427...52,663,807 		JBrowse link
G DCLRE1C DNA cross-link repair 1C acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr10:14,901,335...14,956,947
Ensembl chr10:15,236,558...15,269,043 		JBrowse link
G DNAJB9 DnaJ heat shock protein family (Hsp40) member B9 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:100,555,527...100,560,052
Ensembl chr 7:113,274,015...113,279,105 		JBrowse link
G EP300 E1A binding protein p300 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr22:21,986,467...22,076,921
Ensembl chr22:40,079,503...40,168,604 		JBrowse link
G EZH2 enhancer of zeste 2 polycomb repressive complex 2 subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:140,536,962...140,613,104
Ensembl chr 7:153,017,590...153,059,726 		JBrowse link
G FLT3 fms related receptor tyrosine kinase 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr13:9,283,747...9,381,553
Ensembl chr13:27,627,178...27,723,940 		JBrowse link
G FLT3LG fms related receptor tyrosine kinase 3 ligand involved_in ISO (PMID:38701783) UniProt PMID:38701783 NCBI chr19:46,486,169...46,499,008 JBrowse link
G FNIP1 folliculin interacting protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:127,070,906...127,219,548
Ensembl chr 5:133,235,501...133,384,218 		JBrowse link
G FOSL2 FOS like 2, AP-1 transcription factor subunit acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr2A:28,392,328...28,416,838
Ensembl chr2A:28,485,613...28,498,397 		JBrowse link
G FZD9 frizzled class receptor 9 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 Ensembl chr 7:80,588,167...80,590,337 JBrowse link
G GIMAP1 GTPase, IMAP family member 1 acts_upstream_of_or_within ISO (PMID:20194894) MGI PMID:20194894 NCBI chr 7:142,299,040...142,303,621 JBrowse link
G GON4L gon-4 like acts_upstream_of_or_within ISO (PMID:20530203) MGI PMID:20530203 NCBI chr 1:131,084,009...131,193,884
Ensembl chr 1:134,917,791...135,020,042 		JBrowse link
G GPS2 G protein pathway suppressor 2 involved_in ISO (PMID:28039360) UniProt PMID:28039360 NCBI chr17:7,346,766...7,349,682
Ensembl chr17:7,333,571...7,335,871 		JBrowse link
G HHEX hematopoietically expressed homeobox acts_upstream_of_or_within
involved_in		 ISO (PMID:12522149) MGI
BHF-UCL		 PMID:12522149 NCBI chr10:89,433,402...89,439,137
Ensembl chr10:92,947,373...92,952,992 		JBrowse link
G HMGA1 high mobility group AT-hook 1 acts_upstream_of_or_within ISO (PMID:32341372) MGI PMID:32341372 NCBI chr 6:33,807,171...33,816,603 JBrowse link
G ID2 inhibitor of DNA binding 2 acts_upstream_of ISO (PMID:18523151) MGI PMID:18523151 NCBI chr2A:8,681,592...8,684,014
Ensembl chr2A:8,847,776...8,850,720 		JBrowse link
G IKZF1 IKAROS family zinc finger 1 acts_upstream_of_or_within ISO (PMID:23071339)
(PMID:7923373)		 MGI PMID:7923373 PMID:23071339 NCBI chr 7:50,946,817...51,047,168
Ensembl chr 7:51,191,685...51,291,245 		JBrowse link
G IKZF3 IKAROS family zinc finger 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:17,459,438...17,498,452
Ensembl chr17:17,643,750...17,741,479 		JBrowse link
G IL2RG interleukin 2 receptor subunit gamma acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr  X:60,375,815...60,386,936
Ensembl chr  X:70,433,360...70,437,590 		JBrowse link
G IL9 interleukin 9 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 5:131,283,170...131,289,777
Ensembl chr 5:137,425,367...137,428,945 		JBrowse link
G JAK3 Janus kinase 3 involved_in ISO (PMID:9498750) BHF-UCL PMID:9498750 NCBI chr19:17,299,129...17,330,700
Ensembl chr19:18,283,560...18,300,964 		JBrowse link
G KIT KIT proto-oncogene, receptor tyrosine kinase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 4:69,199,543...69,282,323
Ensembl chr 4:75,761,946...75,844,473 		JBrowse link
G LOC100988550 signal transducer and activator of transcription 5A acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr17:15,005,025...15,029,110
Ensembl chr17:15,228,465...15,251,783 		JBrowse link
G LOC100989105 signal transducer and activator of transcription 5B acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr17:15,040,303...15,116,682
Ensembl chr17:15,306,418...15,336,463 		JBrowse link
G LOC100991889 interleukin-9 receptor acts_upstream_of_or_within ISO (PMID:30082831) MGI PMID:30082831 NCBI chr 9:109,268,011...109,277,418
Ensembl chr  X:155,373,324...155,386,631 		JBrowse link
G LYL1 LYL1 basic helix-loop-helix family member involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:12,660,548...12,664,513
Ensembl chr19:13,407,596...13,409,309 		JBrowse link
G MS4A1 membrane spanning 4-domains A1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:55,691,750...55,706,697
Ensembl chr11:59,134,617...59,149,521 		JBrowse link
G MSH2 mutS homolog 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr2A:47,524,468...47,602,376
Ensembl chr2A:48,447,207...48,554,461 		JBrowse link
G MUC19 mucin 19, oligomeric acts_upstream_of_or_within ISO (PMID:37475871) MGI PMID:37475871 NCBI chr12:48,135,613...48,319,443 JBrowse link
G MYB MYB proto-oncogene, transcription factor acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 6:132,952,728...132,990,560
Ensembl chr 6:137,048,812...137,086,194 		JBrowse link
G NFAM1 NFAT activating protein with ITAM motif 1 involved_in ISO (PMID:15143214) HGNC-UCL PMID:15143214 NCBI chr22:23,276,675...23,332,932
Ensembl chr22:41,345,206...41,396,721 		JBrowse link
G NHEJ1 non-homologous end joining factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2B:106,326,596...106,419,928
Ensembl chr2B:224,926,183...225,008,788 		JBrowse link
G NKX2-3 NK2 homeobox 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr10:96,146,636...96,150,238 JBrowse link
G NTRK1 neurotrophic receptor tyrosine kinase 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 Ensembl chr 1:136,007,476...136,047,355 JBrowse link
G ONECUT1 one cut homeobox 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr15:31,694,830...31,727,644
Ensembl chr15:50,016,010...50,053,062 		JBrowse link
G PIK3R1 phosphoinositide-3-kinase regulatory subunit 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 5:45,701,219...45,786,652
Ensembl chr 5:47,267,286...47,350,960 		JBrowse link
G PLCG2 phospholipase C gamma 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:62,383,270...62,561,579
Ensembl chr16:81,812,565...81,984,064 		JBrowse link
G POLM DNA polymerase mu acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 7:44,785,797...44,796,624
Ensembl chr 7:44,852,594...44,862,816 		JBrowse link
G POU1F1 POU class 1 homeobox 1 acts_upstream_of_or_within ISO (PMID:9300691) MGI PMID:9300691 NCBI chr 3:87,390,157...87,407,611
Ensembl chr 3:89,501,298...89,521,168 		JBrowse link
G PTPN2 protein tyrosine phosphatase non-receptor type 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:1,440,837...1,538,501
Ensembl chr18:16,562,052...16,659,570 		JBrowse link
G PTPRC protein tyrosine phosphatase receptor type C acts_upstream_of_or_within
involved_in		 IEA
ISO		 (PMID:15557316), (PMID:18249142) Ensembl
ARUK-UCL		 PMID:15557316 PMID:18249142 GO_REF:0000107 NCBI chr 1:174,246,389...174,364,893
Ensembl chr 1:178,556,104...178,672,994 		JBrowse link
G PTPRJ protein tyrosine phosphatase receptor type J involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:47,941,134...48,130,538
Ensembl chr11:48,613,761...48,670,494 		JBrowse link
G RABL3 RAB, member of RAS oncogene family like 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:117,794,224...117,850,184
Ensembl chr 3:124,707,984...124,748,983 		JBrowse link
G RAG1 recombination activating 1 involved_in
acts_upstream_of_or_within		 IEA UniProt
Ensembl		 GO_REF:0000104 GO_REF:0000107 NCBI chr11:36,483,697...36,546,242
Ensembl chr11:36,412,420...36,422,904 		JBrowse link
G RAG2 recombination activating 2 acts_upstream_of_or_within
involved_in		 IEA
ISO		 (PMID:1547487), (PMID:1547488) Ensembl
UniProt		 PMID:1547487 PMID:1547488 GO_REF:0000107 NCBI chr11:36,558,419...36,564,997
Ensembl chr11:36,431,703...36,433,286 		JBrowse link
G RBPJ recombination signal binding protein for immunoglobulin kappa J region acts_upstream_of_or_within ISO (PMID:11967543) MGI PMID:11967543 NCBI chr 4:20,719,548...20,835,439
Ensembl chr 4:25,995,263...26,107,683 		JBrowse link
G SLC25A5 solute carrier family 25 member 5 involved_in ISO (PMID:25613378) UniProt PMID:25613378 NCBI chr  X:108,501,654...108,504,591
Ensembl chr  X:118,926,743...118,929,624 		JBrowse link
G SLC39A7 solute carrier family 39 member 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:32,773,016...32,776,650
Ensembl chr 6:33,887,955...33,891,558 		JBrowse link
G SP3 Sp3 transcription factor acts_upstream_of_or_within ISO (PMID:12676787) MGI PMID:12676787 NCBI chr2B:61,185,975...61,243,155
Ensembl chr2B:178,639,677...178,692,848 		JBrowse link
G SYK spleen associated tyrosine kinase acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr 9:61,859,767...61,956,619
Ensembl chr 9:89,959,599...90,056,101 		JBrowse link
G TCIRG1 T cell immune regulator 1, ATPase H+ transporting V0 subunit a3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr11:63,120,913...63,132,831
Ensembl chr11:66,429,435...66,441,327 		JBrowse link
G TMIGD2 transmembrane and immunoglobulin domain containing 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr19:3,315,266...3,325,759
Ensembl chr19:4,262,536...4,272,212 		JBrowse link
G TNFSF13B TNF superfamily member 13b involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17581616) Ensembl
MGI		 PMID:17581616 GO_REF:0000107 NCBI chr13:89,399,044...89,438,837
Ensembl chr13:108,536,617...108,574,296 		JBrowse link
G TOP2B DNA topoisomerase II beta involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:25,499,239...25,566,029
Ensembl chr 3:25,828,879...25,896,912 		JBrowse link
G TPD52 tumor protein D52 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 8:76,562,979...76,698,329 JBrowse link
G TSHR thyroid stimulating hormone receptor acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr14:61,517,767...61,708,241
Ensembl chr14:80,718,433...80,905,890 		JBrowse link
G YY1 YY1 transcription factor involved_in ISO (PMID:23531880) MGI PMID:23531880 NCBI chr14:80,859,491...80,903,651 JBrowse link
G ZBTB1 zinc finger and BTB domain containing 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr14:45,085,146...45,114,965
Ensembl chr14:63,354,458...63,359,403 		JBrowse link
G ZBTB7A zinc finger and BTB domain containing 7A involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:3,066,554...3,090,285 JBrowse link
B cell lineage commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BCL2 BCL2 apoptosis regulator acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr18:56,481,212...56,679,012
Ensembl chr18:59,802,443...59,992,100 		JBrowse link
G PRKDC protein kinase, DNA-activated, catalytic subunit acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 8:44,201,391...44,386,803
Ensembl chr 8:41,593,029...41,778,299 		JBrowse link
G RAG2 recombination activating 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr11:36,558,419...36,564,997
Ensembl chr11:36,431,703...36,433,286 		JBrowse link
G TCF3 transcription factor 3 involved_in ISO (PMID:15030778) UniProt PMID:15030778 Ensembl chr19:1,582,297...1,622,025 JBrowse link
G TP53 tumor protein p53 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr17:7,699,449...7,717,812
Ensembl chr17:7,684,922...7,706,120 		JBrowse link
B cell negative selection term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BAK1 BCL2 antagonist/killer 1 acts_upstream_of_or_within ISO (PMID:16055554) MGI PMID:16055554 NCBI chr 6:33,146,998...33,154,755
Ensembl chr 6:34,255,769...34,263,211 		JBrowse link
G BAX BCL2 associated X, apoptosis regulator acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr19:45,955,926...45,962,870
Ensembl chr19:54,793,594...54,800,468 		JBrowse link
B-1 B cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CD19 CD19 molecule involved_in ISO (PMID:7543183) UniProt PMID:7543183 Ensembl chr16:29,320,734...29,327,481 JBrowse link
G MALT1 MALT1 paracaspase acts_upstream_of_or_within ISO (PMID:14614861) MGI PMID:14614861 NCBI chr18:52,060,878...52,141,985
Ensembl chr18:55,395,462...55,473,574 		JBrowse link
B-1 B cell lineage commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SLAMF8 SLAM family member 8 involved_in ISO (PMID:11313408) UniProt PMID:11313408 NCBI chr 1:135,178,241...135,189,005 JBrowse link
B-1a B cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CMTM7 CKLF like MARVEL transmembrane domain containing 7 acts_upstream_of_or_within ISO (PMID:24080084) MGI PMID:24080084 NCBI chr 3:32,308,975...32,372,711 JBrowse link
G DPP4 dipeptidyl peptidase 4 ISO RGD PMID:19327106 RGD:41408336 NCBI chr2B:49,285,685...49,368,056
Ensembl chr2B:166,654,659...166,736,588 		JBrowse link
G NFATC1 nuclear factor of activated T cells 1 acts_upstream_of_or_within ISO (PMID:14595020) MGI PMID:14595020 NCBI chr18:72,948,067...73,083,180
Ensembl chr18:76,017,454...76,094,453 		JBrowse link
G PLCL2 phospholipase C like 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 3:16,736,430...17,015,531
Ensembl chr 3:17,154,500...17,351,287 		JBrowse link
beta selection term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC100971372 tyrosine-protein kinase ZAP-70 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr2A:101,582,567...101,613,175
Ensembl chr2A:98,613,740...98,639,088 		JBrowse link
G RHOA ras homolog family member A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:49,282,009...49,339,887 JBrowse link
G SYK spleen associated tyrosine kinase acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 9:61,859,767...61,956,619
Ensembl chr 9:89,959,599...90,056,101 		JBrowse link
CD4-positive or CD8-positive, alpha-beta T cell lineage commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BRAF B-Raf proto-oncogene, serine/threonine kinase acts_upstream_of_or_within ISO (PMID:18228248) MGI PMID:18228248 NCBI chr 7:132,651,908...132,855,422
Ensembl chr 7:145,138,510...145,327,115 		JBrowse link
G CYLD CYLD lysine 63 deubiquitinase acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr16:31,004,393...31,064,546
Ensembl chr16:49,882,751...49,942,629 		JBrowse link
G SHH sonic hedgehog signaling molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:147,400,112...147,414,036
Ensembl chr 7:159,114,666...159,126,651 		JBrowse link
CD4-positive, alpha-beta T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARMC5 armadillo repeat containing 5 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr16:23,498,343...23,507,287
Ensembl chr16:31,828,037...31,840,479 		JBrowse link
G BRAF B-Raf proto-oncogene, serine/threonine kinase acts_upstream_of_or_within ISO (PMID:23334952) MGI PMID:23334952 NCBI chr 7:132,651,908...132,855,422
Ensembl chr 7:145,138,510...145,327,115 		JBrowse link
G CD83 CD83 molecule acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr 6:13,961,342...13,980,686
Ensembl chr 6:14,330,752...14,349,946 		JBrowse link
G FOXP3 forkhead box P3 acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr  X:41,550,462...41,567,492
Ensembl chr  X:49,402,652...49,417,029 		JBrowse link
G GIMAP1 GTPase, IMAP family member 1 acts_upstream_of_or_within ISO (PMID:20194894) MGI PMID:20194894 NCBI chr 7:142,299,040...142,303,621 JBrowse link
G NKX2-3 NK2 homeobox 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr10:96,146,636...96,150,238 JBrowse link
G PAX1 paired box 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr20:21,663,155...21,676,880
Ensembl chr20:21,623,771...21,632,608 		JBrowse link
G RSAD2 radical S-adenosyl methionine domain containing 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2A:6,873,821...6,906,087
Ensembl chr2A:7,021,937...7,042,961 		JBrowse link
G SASH3 SAM and SH3 domain containing 3 acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr  X:118,909,980...118,924,779
Ensembl chr  X:129,207,049...129,222,342 		JBrowse link
G SATB1 SATB homeobox 1 acts_upstream_of_or_within ISO (PMID:10716941) MGI PMID:10716941 NCBI chr 3:18,267,819...18,368,924
Ensembl chr 3:18,602,204...18,681,211 		JBrowse link
CD4-positive, alpha-beta T cell lineage commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CTSL cathepsin L involved_in ISO (PMID:9545226) UniProt PMID:9545226 NCBI chr 9:58,851,899...58,857,170
Ensembl chr 9:86,903,006...86,908,303 		JBrowse link
G TOX thymocyte selection associated high mobility group box involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:55,246,933...55,553,839
Ensembl chr 8:56,922,773...57,219,410 		JBrowse link
CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FOXP3 forkhead box P3 acts_upstream_of
involved_in		 IEA
ISO		 (PMID:22079196) Ensembl
CACAO		 PMID:22079196 GO_REF:0000107 NCBI chr  X:41,550,462...41,567,492
Ensembl chr  X:49,402,652...49,417,029 		JBrowse link
G FUT7 fucosyltransferase 7 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 9:108,090,793...108,093,513
Ensembl chr 9:137,058,831...137,061,607 		JBrowse link
G IL2RG interleukin 2 receptor subunit gamma acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr  X:60,375,815...60,386,936
Ensembl chr  X:70,433,360...70,437,590 		JBrowse link
G NCOR1 nuclear receptor corepressor 1 acts_upstream_of_or_within ISO (PMID:11030619) MGI PMID:11030619 NCBI chr17:34,934,452...35,121,195 JBrowse link
G PLA2G2D phospholipase A2 group IID acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:19,066,890...19,074,711
Ensembl chr 1:20,110,323...20,117,618 		JBrowse link
CD4-positive, CD25-positive, alpha-beta regulatory T cell lineage commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TOX thymocyte selection associated high mobility group box involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:55,246,933...55,553,839
Ensembl chr 8:56,922,773...57,219,410 		JBrowse link
CD8-positive, alpha-beta intraepithelial T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GPR18 G protein-coupled receptor 18 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr13:80,423,534...80,427,604
Ensembl chr13:99,562,589...99,563,584 		JBrowse link
CD8-positive, alpha-beta T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GIMAP1 GTPase, IMAP family member 1 acts_upstream_of_or_within ISO (PMID:20194894) MGI PMID:20194894 NCBI chr 7:142,299,040...142,303,621 JBrowse link
G IRF1 interferon regulatory factor 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 5:127,903,887...127,913,843
Ensembl chr 5:134,067,441...134,075,035 		JBrowse link
G OTUD5 OTU deubiquitinase 5 acts_upstream_of_or_within ISO (PMID:25470037) MGI PMID:25470037 NCBI chr  X:41,219,536...41,256,219 JBrowse link
G PAX1 paired box 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr20:21,663,155...21,676,880
Ensembl chr20:21,623,771...21,632,608 		JBrowse link
G PSMB11 proteasome subunit beta 11 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr14:3,861,823...3,863,949
Ensembl chr14:21,959,146...21,960,048 		JBrowse link
G SATB1 SATB homeobox 1 acts_upstream_of_or_within ISO (PMID:10716941), (PMID:15814699) MGI PMID:10716941 PMID:15814699 NCBI chr 3:18,267,819...18,368,924
Ensembl chr 3:18,602,204...18,681,211 		JBrowse link
G TNFSF8 TNF superfamily member 8 involved_in
acts_upstream_of_or_within		 IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chr 9:85,998,567...86,036,373
Ensembl chr 9:114,360,206...114,397,822 		JBrowse link
CD8-positive, alpha-beta T cell differentiation involved in immune response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EOMES eomesodermin involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 3:27,601,829...27,608,701
Ensembl chr 3:27,925,086...27,930,274 		JBrowse link
G IFNG interferon gamma acts_upstream_of_or_within ISO (PMID:17277142) MGI PMID:17277142 NCBI chr12:65,663,764...65,668,732
Ensembl chr12:68,448,861...68,453,829 		JBrowse link
CD8-positive, alpha-beta T cell lineage commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BCL2 BCL2 apoptosis regulator acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr18:56,481,212...56,679,012
Ensembl chr18:59,802,443...59,992,100 		JBrowse link
G TOX thymocyte selection associated high mobility group box involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:55,246,933...55,553,839
Ensembl chr 8:56,922,773...57,219,410 		JBrowse link
CD8-positive, gamma-delta intraepithelial T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CCR9 C-C motif chemokine receptor 9 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 3:45,719,655...45,810,964
Ensembl chr 3:46,900,845...46,917,443 		JBrowse link
G GPR18 G protein-coupled receptor 18 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr13:80,423,534...80,427,604
Ensembl chr13:99,562,589...99,563,584 		JBrowse link
G LOC100990924 NKG2-A/NKG2-B type II integral membrane protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:10,469,351...10,576,060
Ensembl chr12:10,720,723...10,744,046 		JBrowse link
cytotoxic T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CD8A CD8 subunit alpha acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:1673361) MGI
TreeGrafter		 PMID:1673361 GO_REF:0000118 NCBI chr2A:86,832,559...86,855,772
Ensembl chr2A:88,377,722...88,382,635 		JBrowse link
DN2 thymocyte differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CCR6 C-C motif chemokine receptor 6 involved_in ISO (PMID:24638065) UniProt PMID:24638065 NCBI chr 6:165,094,563...165,109,774
Ensembl chr 6:170,069,689...170,084,779 		JBrowse link
G LIG4 DNA ligase 4 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr13:89,336,434...89,347,418
Ensembl chr13:108,475,820...108,478,555 		JBrowse link
G RAG2 recombination activating 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr11:36,558,419...36,564,997
Ensembl chr11:36,431,703...36,433,286 		JBrowse link
G XRCC4 X-ray repair cross complementing 4 acts_upstream_of_or_within ISO (PMID:9875844) MGI PMID:9875844 NCBI chr 5:31,927,463...32,202,394
Ensembl chr 5:32,246,320...32,521,490 		JBrowse link
DN3 thymocyte differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CCR6 C-C motif chemokine receptor 6 involved_in ISO (PMID:24638065) UniProt PMID:24638065 NCBI chr 6:165,094,563...165,109,774
Ensembl chr 6:170,069,689...170,084,779 		JBrowse link
DN4 thymocyte differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABL1 ABL proto-oncogene 1, non-receptor tyrosine kinase acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 9:101,834,189...102,005,811
Ensembl chr 9:130,484,333...130,652,941 		JBrowse link
G ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase acts_upstream_of_or_within ISO (PMID:18025176) MGI PMID:18025176 NCBI chr 1:154,586,423...154,711,621
Ensembl chr 1:158,280,994...158,313,915 		JBrowse link
G BLM BLM RecQ like helicase acts_upstream_of_or_within ISO (PMID:17210642) MGI PMID:17210642 NCBI chr15:69,407,248...69,508,070
Ensembl chr15:88,607,157...88,707,864 		JBrowse link
G NFATC3 nuclear factor of activated T cells 3 involved_in ISO (PMID:17579027) UniProt PMID:17579027 NCBI chr16:48,456,144...48,603,306
Ensembl chr16:67,888,806...67,996,274 		JBrowse link
extrathymic T cell selection term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G IL15 interleukin 15 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 4:133,693,995...134,115,470
Ensembl chr 4:145,402,111...145,416,622 		JBrowse link
follicular B cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G IRF8 interferon regulatory factor 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:66,568,370...66,591,949
Ensembl chr16:85,905,334...85,929,073 		JBrowse link
G MUC19 mucin 19, oligomeric acts_upstream_of_or_within ISO (PMID:37475871) MGI PMID:37475871 NCBI chr12:48,135,613...48,319,443 JBrowse link
G PLCG2 phospholipase C gamma 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr16:62,383,270...62,561,579
Ensembl chr16:81,812,565...81,984,064 		JBrowse link
G SPI1 Spi-1 proto-oncogene involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:47,301,245...47,326,891
Ensembl chr11:47,853,991...47,880,259 		JBrowse link
gamma-delta T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G JAG2 jagged canonical Notch ligand 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:85,785,586...85,812,056
Ensembl chr14:105,569,837...105,585,878 		JBrowse link
G LCK LCK proto-oncogene, Src family tyrosine kinase acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr 1:31,560,229...31,572,391
Ensembl chr 1:32,565,739...32,579,923 		JBrowse link
G LOC100988550 signal transducer and activator of transcription 5A acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr17:15,005,025...15,029,110
Ensembl chr17:15,228,465...15,251,783 		JBrowse link
G LOC100989105 signal transducer and activator of transcription 5B acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr17:15,040,303...15,116,682
Ensembl chr17:15,306,418...15,336,463 		JBrowse link
G PTPRC protein tyrosine phosphatase receptor type C acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr 1:174,246,389...174,364,893
Ensembl chr 1:178,556,104...178,672,994 		JBrowse link
G SOX13 SRY-box transcription factor 13 involved_in ISO (PMID:17218525), (PMID:30413363) UniProt PMID:17218525 PMID:30413363 NCBI chr 1:179,675,017...179,730,628
Ensembl chr 1:184,003,907...184,016,504 		JBrowse link
G SYK spleen associated tyrosine kinase acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr 9:61,859,767...61,956,619
Ensembl chr 9:89,959,599...90,056,101 		JBrowse link
G TCF7 transcription factor 7 involved_in ISO (PMID:30413363) UniProt PMID:30413363 NCBI chr 5:129,518,134...129,549,972
Ensembl chr 5:135,671,095...135,702,734 		JBrowse link
germinal center B cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADA adenosine deaminase acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr20:40,950,238...40,982,481
Ensembl chr20:42,044,613...42,076,868 		JBrowse link
G CDH17 cadherin 17 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:90,750,904...90,818,629
Ensembl chr 8:92,696,182...92,760,732 		JBrowse link
G IL21 interleukin 21 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:114,795,979...114,806,936
Ensembl chr 4:125,943,495...125,951,915 		JBrowse link
G IL6 interleukin 6 involved_in ISO (PMID:23045607) UniProt PMID:23045607 NCBI chr 7:23,415,922...23,420,767 JBrowse link
G IRF8 interferon regulatory factor 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:66,568,370...66,591,949
Ensembl chr16:85,905,334...85,929,073 		JBrowse link
G ITFG2 integrin alpha FG-GAP repeat containing 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr12:2,933,227...2,980,509
Ensembl chr12:2,865,297...2,877,555 		JBrowse link
G PHF14 PHD finger protein 14 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:11,608,934...11,822,039
Ensembl chr 7:10,972,503...11,169,377 		JBrowse link
G POU2AF1 POU class 2 homeobox associating factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:106,231,870...106,258,822
Ensembl chr11:110,078,850...110,103,996 		JBrowse link
G SPI1 Spi-1 proto-oncogene involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:47,301,245...47,326,891
Ensembl chr11:47,853,991...47,880,259 		JBrowse link
immature B cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FNIP1 folliculin interacting protein 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 5:127,070,906...127,219,548
Ensembl chr 5:133,235,501...133,384,218 		JBrowse link
G IRF2BP2 interferon regulatory factor 2 binding protein 2 involved_in ISO (PMID:27016798) UniProt PMID:27016798 NCBI chr 1:210,143,516...210,148,878 JBrowse link
G KIT KIT proto-oncogene, receptor tyrosine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:69,199,543...69,282,323
Ensembl chr 4:75,761,946...75,844,473 		JBrowse link
G PRKDC protein kinase, DNA-activated, catalytic subunit acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 8:44,201,391...44,386,803
Ensembl chr 8:41,593,029...41,778,299 		JBrowse link
G SPI1 Spi-1 proto-oncogene involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:47,301,245...47,326,891
Ensembl chr11:47,853,991...47,880,259 		JBrowse link
G SPIB Spi-B transcription factor involved_in ISO (PMID:28062693) ARUK-UCL PMID:28062693 NCBI chr19:47,382,653...47,395,178
Ensembl chr19:56,251,356...56,297,611 		JBrowse link
G SYVN1 synoviolin 1 involved_in ISO (PMID:29907570) UniProt PMID:29907570 NCBI chr11:60,489,626...60,496,945
Ensembl chr11:63,829,138...63,834,364 		JBrowse link
immature T cell proliferation in thymus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BLM BLM RecQ like helicase acts_upstream_of ISO (PMID:17210642) MGI PMID:17210642 NCBI chr15:69,407,248...69,508,070
Ensembl chr15:88,607,157...88,707,864 		JBrowse link
G CLEC4G C-type lectin domain family 4 member G acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr19:7,015,848...7,019,396
Ensembl chr19:7,870,730...7,873,631 		JBrowse link
G ERBB2 erb-b2 receptor tyrosine kinase 2 acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr17:17,560,337...17,600,808
Ensembl chr17:17,777,434...17,805,862 		JBrowse link
G FOXP3 forkhead box P3 acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr  X:41,550,462...41,567,492
Ensembl chr  X:49,402,652...49,417,029 		JBrowse link
G IFNAR2 interferon alpha and beta receptor subunit 2 acts_upstream_of_or_within ISO (PMID:11154225) MGI PMID:11154225 NCBI chr21:19,593,032...19,628,651
Ensembl chr21:32,981,428...33,004,062 		JBrowse link
G RIPK2 receptor interacting serine/threonine kinase 2 acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr 8:86,447,216...86,480,511
Ensembl chr 8:88,398,468...88,456,268 		JBrowse link
G WNT4 Wnt family member 4 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:21,310,228...21,335,985
Ensembl chr 1:22,255,056...22,268,801 		JBrowse link
marginal zone B cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADAM10 ADAM metallopeptidase domain 10 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:37,562,930...37,717,175
Ensembl chr15:55,873,606...56,027,188 		JBrowse link
G BCL3 BCL3 transcription coactivator acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr19:41,696,162...41,708,485
Ensembl chr19:50,304,171...50,313,005 		JBrowse link
G CDH17 cadherin 17 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:90,750,904...90,818,629
Ensembl chr 8:92,696,182...92,760,732 		JBrowse link
G DLL1 delta like canonical Notch ligand 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:168,440,192...168,449,071
Ensembl chr 6:173,534,292...173,544,759 		JBrowse link
G DOCK10 dedicator of cytokinesis 10 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2B:112,006,479...112,283,939
Ensembl chr2B:230,578,452...230,854,877 		JBrowse link
G DOCK11 dedicator of cytokinesis 11 involved_in IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chr  X:107,502,955...107,694,069
Ensembl chr  X:117,952,995...118,161,009 		JBrowse link
G LFNG LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase involved_in ISO (PMID:19217325) UniProt PMID:19217325 NCBI chr 7:2,781,493...2,790,936 JBrowse link
G MFNG MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:18,385,664...18,407,056
Ensembl chr22:36,218,403...36,239,804 		JBrowse link
G NOTCH2 notch receptor 2 involved_in ISO (PMID:19217325) UniProt PMID:19217325 NCBI chr 1:82,457,829...82,615,142
Ensembl chr 1:117,538,243...117,612,840 		JBrowse link
G PTK2B protein tyrosine kinase 2 beta involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:26,580,855...26,729,378
Ensembl chr 8:23,869,825...23,932,474 		JBrowse link
G TAOK3 TAO kinase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:115,730,619...115,954,149
Ensembl chr12:119,109,642...119,226,502 		JBrowse link
mature B cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G IL2RG interleukin 2 receptor subunit gamma acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr  X:60,375,815...60,386,936
Ensembl chr  X:70,433,360...70,437,590 		JBrowse link
G POU2F2 POU class 2 homeobox 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr19:38,974,635...39,065,103
Ensembl chr19:47,570,891...47,611,589 		JBrowse link
mature B cell differentiation involved in immune response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G C19H17orf99 chromosome 19 C17orf99 homolog involved_in ISO (PMID:28978694) UniProt PMID:28978694 NCBI chr17:72,223,073...72,244,049
Ensembl chr17:77,776,151...77,796,139 		JBrowse link
G GPR183 G protein-coupled receptor 183 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:80,461,908...80,475,046
Ensembl chr13:99,601,220...99,602,305 		JBrowse link
G RAG2 recombination activating 2 ISO RGD PMID:30206106 RGD:38508903 NCBI chr11:36,558,419...36,564,997
Ensembl chr11:36,431,703...36,433,286 		JBrowse link
memory B cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ST3GAL1 ST3 beta-galactoside alpha-2,3-sialyltransferase 1 involved_in ISO (PMID:10755614) UniProt PMID:10755614 NCBI chr 8:130,111,085...130,227,195
Ensembl chr 8:133,084,835...133,119,791 		JBrowse link
memory T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TSC1 TSC complex subunit 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 9:104,007,708...104,060,938
Ensembl chr 9:132,638,003...132,675,759 		JBrowse link
natural killer cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AXL AXL receptor tyrosine kinase involved_in
acts_upstream_of_or_within		 IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chr19:38,211,555...38,254,464
Ensembl chr19:46,719,615...46,761,747 		JBrowse link
G FLT3LG fms related receptor tyrosine kinase 3 ligand acts_upstream_of
involved_in		 ISO (PMID:14607906)
(PMID:38701783)		 MGI
UniProt		 PMID:14607906 PMID:38701783 NCBI chr19:46,486,169...46,499,008 JBrowse link
G HECTD1 HECT domain E3 ubiquitin protein ligase 1 acts_upstream_of_or_within ISO (PMID:24855001) MGI PMID:24855001 NCBI chr14:11,871,973...11,979,548
Ensembl chr14:30,070,567...30,176,915 		JBrowse link
G ID2 inhibitor of DNA binding 2 acts_upstream_of_or_within ISO (PMID:17452521) MGI PMID:17452521 NCBI chr2A:8,681,592...8,684,014
Ensembl chr2A:8,847,776...8,850,720 		JBrowse link
G IKZF1 IKAROS family zinc finger 1 acts_upstream_of_or_within ISO (PMID:7923373) MGI PMID:7923373 NCBI chr 7:50,946,817...51,047,168
Ensembl chr 7:51,191,685...51,291,245 		JBrowse link
G IL15 interleukin 15 acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr 4:133,693,995...134,115,470
Ensembl chr 4:145,402,111...145,416,622 		JBrowse link
G IL15RA interleukin 15 receptor subunit alpha acts_upstream_of ISO (PMID:14607906) MGI PMID:14607906 NCBI chr10:5,993,583...6,019,967 JBrowse link
G IL21 interleukin 21 acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr 4:114,795,979...114,806,936
Ensembl chr 4:125,943,495...125,951,915 		JBrowse link
G KAT7 lysine acetyltransferase 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:43,875,921...43,916,352
Ensembl chr17:48,605,488...48,645,784 		JBrowse link
G KCTD9 potassium channel tetramerization domain containing 9 acts_upstream_of_or_within ISO (PMID:31024568) MGI PMID:31024568 NCBI chr 8:24,708,896...24,739,197
Ensembl chr 8:21,618,042...21,648,309 		JBrowse link
G LOC100988550 signal transducer and activator of transcription 5A acts_upstream_of_or_within ISO
IEA		 (PMID:10072077) MGI
Ensembl		 PMID:10072077 GO_REF:0000107 NCBI chr17:15,005,025...15,029,110
Ensembl chr17:15,228,465...15,251,783 		JBrowse link
G LOC100989105 signal transducer and activator of transcription 5B acts_upstream_of_or_within ISO
IEA		 (PMID:10072077) MGI
Ensembl		 PMID:10072077 GO_REF:0000107 NCBI chr17:15,040,303...15,116,682
Ensembl chr17:15,306,418...15,336,463 		JBrowse link
G MERTK MER proto-oncogene, tyrosine kinase acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr2A:89,977,226...90,109,970
Ensembl chr2A:113,056,852...113,162,052 		JBrowse link
G NFIL3 nuclear factor, interleukin 3 regulated involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:62,467,360...62,482,926
Ensembl chr 9:90,567,116...90,568,504 		JBrowse link
G PBX1 PBX homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:139,985,392...140,311,845
Ensembl chr 1:143,778,701...144,104,797 		JBrowse link
G PTPRC protein tyrosine phosphatase receptor type C involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:174,246,389...174,364,893
Ensembl chr 1:178,556,104...178,672,994 		JBrowse link
G RABL3 RAB, member of RAS oncogene family like 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:117,794,224...117,850,184
Ensembl chr 3:124,707,984...124,748,983 		JBrowse link
G SLAMF1 signaling lymphocytic activation molecule family member 1 involved_in ISO (PMID:18031695) UniProt PMID:18031695 NCBI chr 1:135,963,748...136,002,982
Ensembl chr 1:139,888,772...139,925,461 		JBrowse link
G SLAMF6 SLAM family member 6 involved_in ISO (PMID:18031695) UniProt PMID:18031695 NCBI chr 1:135,838,862...135,878,207
Ensembl chr 1:139,761,121...139,799,348 		JBrowse link
G SP3 Sp3 transcription factor acts_upstream_of_or_within ISO (PMID:12676787) MGI PMID:12676787 NCBI chr2B:61,185,975...61,243,155
Ensembl chr2B:178,639,677...178,692,848 		JBrowse link
G TCF3 transcription factor 3 acts_upstream_of_or_within ISO (PMID:17452521) MGI PMID:17452521 Ensembl chr19:1,582,297...1,622,025 JBrowse link
G TOX thymocyte selection associated high mobility group box involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:55,246,933...55,553,839
Ensembl chr 8:56,922,773...57,219,410 		JBrowse link
G TUSC2 tumor suppressor 2, mitochondrial calcium regulator acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 3:50,251,034...50,254,351
Ensembl chr 3:51,486,641...51,489,962 		JBrowse link
G TYRO3 TYRO3 protein tyrosine kinase acts_upstream_of_or_within ISO (PMID:16751775) MGI PMID:16751775 NCBI chr15:20,499,789...20,520,152
Ensembl chr15:38,739,509...38,760,288 		JBrowse link
G ZNF683 zinc finger protein 683 acts_upstream_of_or_within ISO (PMID:22885984) MGI PMID:22885984 NCBI chr 1:25,622,548...25,636,106
Ensembl chr 1:26,690,359...26,703,755 		JBrowse link
negative regulation of alpha-beta T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GLI3 GLI family zinc finger 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:42,004,965...42,280,772
Ensembl chr 7:42,056,565...42,322,865 		JBrowse link
G IHH Indian hedgehog signaling molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chr2B:106,312,472...106,319,124
Ensembl chr2B:224,906,271...224,911,506 		JBrowse link
G SHH sonic hedgehog signaling molecule acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 7:147,400,112...147,414,036
Ensembl chr 7:159,114,666...159,126,651 		JBrowse link
negative regulation of B cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FLT3 fms related receptor tyrosine kinase 3 acts_upstream_of_or_within ISO (PMID:16618805) MGI PMID:16618805 NCBI chr13:9,283,747...9,381,553
Ensembl chr13:27,627,178...27,723,940 		JBrowse link
G HMGB3 high mobility group box 3 acts_upstream_of_or_within ISO (PMID:12714519) MGI PMID:12714519 NCBI chr  X:140,632,163...140,639,774 JBrowse link
G ID2 inhibitor of DNA binding 2 acts_upstream_of_or_within ISO (PMID:18523151) MGI PMID:18523151 NCBI chr2A:8,681,592...8,684,014
Ensembl chr2A:8,847,776...8,850,720 		JBrowse link
G SFRP1 secreted frizzled related protein 1 involved_in ISO (PMID:18941195) UniProt PMID:18941195 NCBI chr 8:40,507,027...40,555,053 JBrowse link
negative regulation of CD4-positive, alpha-beta T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CBFB core-binding factor subunit beta involved_in ISO (PMID:18258917) UniProt PMID:18258917 NCBI chr16:47,373,543...47,446,783 JBrowse link
G HMGB1 high mobility group box 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:11,737,942...11,894,923
Ensembl chr13:30,174,899...30,179,527 		JBrowse link
G RUNX3 RUNX family transcription factor 3 involved_in ISO (PMID:18258917) UniProt PMID:18258917 NCBI chr 1:24,097,321...24,164,065
Ensembl chr 1:25,073,134...25,137,335 		JBrowse link
negative regulation of CD8-positive, alpha-beta T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SLC4A2 solute carrier family 4 member 2 involved_in ISO (PMID:24515893) UniProt PMID:24515893 NCBI chr 7:142,646,413...142,663,376
Ensembl chr 7:154,799,256...154,815,919 		JBrowse link
G SOCS1 suppressor of cytokine signaling 1 involved_in ISO (PMID:24880459) UniProt PMID:24880459 NCBI chr16:10,196,432...10,198,205 JBrowse link
G ZBTB7B zinc finger and BTB domain containing 7B involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:130,350,798...130,366,690
Ensembl chr 1:133,959,847...133,975,729 		JBrowse link
negative regulation of cytotoxic T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LILRB4 leukocyte immunoglobulin like receptor B4 involved_in ISO (PMID:16493035) ARUK-UCL PMID:16493035 NCBI chr19:51,606,681...51,612,751 JBrowse link
negative regulation of immature T cell proliferation in thymus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMP4 bone morphogenetic protein 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:34,542,132...34,549,286
Ensembl chr14:52,821,872...52,828,752 		JBrowse link
G CDKN2A cyclin dependent kinase inhibitor 2A involved_in ISO (PMID:15964995) HGNC-UCL PMID:15964995 NCBI chr 9:21,803,862...21,831,322 JBrowse link
G CLEC4G C-type lectin domain family 4 member G acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr19:7,015,848...7,019,396
Ensembl chr19:7,870,730...7,873,631 		JBrowse link
G ERBB2 erb-b2 receptor tyrosine kinase 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr17:17,560,337...17,600,808
Ensembl chr17:17,777,434...17,805,862 		JBrowse link
G IHH Indian hedgehog signaling molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chr2B:106,312,472...106,319,124
Ensembl chr2B:224,906,271...224,911,506 		JBrowse link
G TMEM131L transmembrane 131 like involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:145,808,457...145,978,954
Ensembl chr 4:157,630,958...157,802,132 		JBrowse link
negative regulation of lymphocyte differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FBXO7 F-box protein 7 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr22:13,481,255...13,505,301
Ensembl chr22:31,335,423...31,359,224 		JBrowse link
negative regulation of memory T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FGL2 fibrinogen like 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 7:69,114,082...69,120,575
Ensembl chr 7:82,926,266...82,932,550 		JBrowse link
G LOC100976419 interferon lambda-1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:36,394,462...36,397,363
Ensembl chr19:44,942,186...44,944,519 		JBrowse link
negative regulation of natural killer cell differentiation involved in immune response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PGLYRP1 peptidoglycan recognition protein 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr19:43,033,080...43,037,726
Ensembl chr19:51,569,275...51,573,764 		JBrowse link
G PGLYRP2 peptidoglycan recognition protein 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr19:14,999,893...15,012,376
Ensembl chr19:15,986,090...15,997,726 		JBrowse link
G PGLYRP3 peptidoglycan recognition protein 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:128,642,034...128,656,082
Ensembl chr 1:132,270,957...132,283,860 		JBrowse link
G PGLYRP4 peptidoglycan recognition protein 4 acts_upstream_of_or_within ISO (PMID:20709292) MGI PMID:20709292 NCBI chr 1:128,681,726...128,700,275
Ensembl chr 1:132,310,256...132,329,013 		JBrowse link
negative regulation of plasma cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BCL6 BCL6 transcription repressor acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 3:184,748,135...184,772,375
Ensembl chr 3:193,308,296...193,332,124 		JBrowse link
G CR1 complement C3b/C4b receptor 1 (Knops blood group) acts_upstream_of ISO (PMID:22962438) ARUK-UCL PMID:22962438 NCBI chr 1:183,094,601...183,246,957 JBrowse link
negative regulation of positive thymic T cell selection term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PTPN2 protein tyrosine phosphatase non-receptor type 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:1,440,837...1,538,501
Ensembl chr18:16,562,052...16,659,570 		JBrowse link
negative regulation of pre-B cell receptor expression term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LAPTM5 lysosomal protein transmembrane 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:30,005,941...30,031,366
Ensembl chr 1:31,032,963...31,058,385 		JBrowse link
negative regulation of regulatory T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CD44 CD44 molecule (IN blood group) involved_in ISO (PMID:25065622) UniProt PMID:25065622 NCBI chr11:35,110,732...35,258,238
Ensembl chr11:34,985,634...35,079,009 		JBrowse link
G CTLA4 cytotoxic T-lymphocyte associated protein 4 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr2B:91,054,917...91,106,234
Ensembl chr2B:209,239,417...209,244,498 		JBrowse link
G HSPB1 heat shock protein family B (small) member 1 ISO RGD PMID:30287503 RGD:38549580 NCBI chr 7:67,716,021...67,717,762
Ensembl chr 7:82,751,523...82,752,984 		JBrowse link
G IRF1 interferon regulatory factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:127,903,887...127,913,843
Ensembl chr 5:134,067,441...134,075,035 		JBrowse link
G LAG3 lymphocyte activating 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:6,903,770...6,909,778
Ensembl chr12:6,817,507...6,823,047 		JBrowse link
G MDK midkine involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:46,339,365...46,342,388
Ensembl chr11:46,891,540...46,893,254 		JBrowse link
G TNFSF4 TNF superfamily member 4 involved_in ISO (PMID:18713990) BHF-UCL PMID:18713990 NCBI chr 1:148,684,689...148,989,775
Ensembl chr 1:152,391,450...152,415,845
Ensembl chr 1:152,391,450...152,415,845 		JBrowse link
G TUG1 taurine up-regulated 1 ISO RGD PMID:30287503 RGD:38549580
negative regulation of T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CD74 CD74 molecule acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 5:145,825,635...145,836,916
Ensembl chr 5:151,830,311...151,841,334 		JBrowse link
G DTX1 deltex E3 ubiquitin ligase 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr12:110,661,247...110,702,780
Ensembl chr12:114,046,700...114,085,372 		JBrowse link
G IFNB1 interferon beta 1 involved_in ISO (PMID:20554961) UniProt PMID:20554961 NCBI chr 9:20,884,742...20,886,317 JBrowse link
G LOC100972354 interferon alpha-2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:21,245,017...21,246,210
Ensembl chr 9:21,863,062...21,863,736 		JBrowse link
G LOC100976419 interferon lambda-1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:36,394,462...36,397,363
Ensembl chr19:44,942,186...44,944,519 		JBrowse link
G NRARP NOTCH regulated ankyrin repeat protein acts_upstream_of_or_within ISO (PMID:12794108) MGI PMID:12794108 NCBI chr 9:108,358,959...108,361,586 JBrowse link
G PRDX2 peroxiredoxin 2 acts_upstream_of_or_within ISO (PMID:16290204) MGI PMID:16290204 NCBI chr19:12,359,084...12,363,552
Ensembl chr19:13,103,422...13,107,369 		JBrowse link
negative regulation of T cell differentiation in thymus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMP4 bone morphogenetic protein 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:34,542,132...34,549,286
Ensembl chr14:52,821,872...52,828,752 		JBrowse link
G FOXJ1 forkhead box J1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:70,084,920...70,089,865
Ensembl chr17:75,638,634...75,641,666 		JBrowse link
G IHH Indian hedgehog signaling molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chr2B:106,312,472...106,319,124
Ensembl chr2B:224,906,271...224,911,506 		JBrowse link
G NFKBID NFKB inhibitor delta acts_upstream_of_or_within ISO (PMID:11931770) MGI PMID:11931770 NCBI chr19:32,805,772...32,817,778
Ensembl chr19:41,553,727...41,568,555 		JBrowse link
G RAG2 recombination activating 2 ISO RGD PMID:30206106 RGD:38508903 NCBI chr11:36,558,419...36,564,997
Ensembl chr11:36,431,703...36,433,286 		JBrowse link
G SHH sonic hedgehog signaling molecule acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 7:147,400,112...147,414,036
Ensembl chr 7:159,114,666...159,126,651 		JBrowse link
G ZC3H8 zinc finger CCCH-type containing 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2A:89,750,479...89,800,330
Ensembl chr2A:113,342,973...113,387,110 		JBrowse link
negative regulation of T-helper 1 cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASCL2 achaete-scute family bHLH transcription factor 2 involved_in ISO (PMID:24463518) UniProt PMID:24463518 NCBI chr11:2,305,497...2,308,080 JBrowse link
G IL4R interleukin 4 receptor acts_upstream_of_or_within ISO (PMID:16424184) MGI PMID:16424184 Ensembl chr16:27,642,702...27,737,445 JBrowse link
G JAK3 Janus kinase 3 involved_in ISO (PMID:16020505) BHF-UCL PMID:16020505 NCBI chr19:17,299,129...17,330,700
Ensembl chr19:18,283,560...18,300,964 		JBrowse link
G TNFSF4 TNF superfamily member 4 involved_in ISO (PMID:9670042) BHF-UCL PMID:9670042 NCBI chr 1:148,684,689...148,989,775
Ensembl chr 1:152,391,450...152,415,845
Ensembl chr 1:152,391,450...152,415,845 		JBrowse link
negative regulation of T-helper 17 cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASCL2 achaete-scute family bHLH transcription factor 2 involved_in ISO (PMID:24463518) UniProt PMID:24463518 NCBI chr11:2,305,497...2,308,080 JBrowse link
G FOXP3 forkhead box P3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:41,550,462...41,567,492
Ensembl chr  X:49,402,652...49,417,029 		JBrowse link
G IL2 interleukin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:114,637,328...114,642,586
Ensembl chr 4:125,782,563...125,787,984 		JBrowse link
G IL4 interleukin 4 acts_upstream_of_or_within ISO (PMID:18792410) MGI PMID:18792410 NCBI chr 5:128,091,342...128,099,886
Ensembl chr 5:134,253,039...134,261,581 		JBrowse link
G PF4 platelet factor 4 ISO RGD PMID:24986443 RGD:329901907 NCBI chr 4:50,208,806...50,210,570
Ensembl chr 4:56,041,833...56,043,750 		JBrowse link
G RC3H1 ring finger and CCCH-type domains 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:149,454,748...149,539,566
Ensembl chr 1:153,160,661...153,213,402 		JBrowse link
G RC3H2 ring finger and CCCH-type domains 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:93,975,164...94,031,516
Ensembl chr 9:122,313,791...122,365,102 		JBrowse link
G SMAD7 SMAD family member 7 involved_in ISO (PMID:25642768) BHF-UCL PMID:25642768 NCBI chr18:42,306,324...42,337,214 JBrowse link
G TBX21 T-box transcription factor 21 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:9,791,008...9,803,894
Ensembl chr17:9,973,920...9,985,660 		JBrowse link
G ZBTB7B zinc finger and BTB domain containing 7B acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:130,350,798...130,366,690
Ensembl chr 1:133,959,847...133,975,729 		JBrowse link
G ZC3H12A zinc finger CCCH-type containing 12A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:36,743,341...36,753,261
Ensembl chr 1:38,093,917...38,103,556 		JBrowse link
negative regulation of T-helper 17 cell lineage commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CD69 CD69 molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:9,800,446...9,808,874
Ensembl chr12:10,049,668...10,058,094 		JBrowse link
G JAK3 Janus kinase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:17,299,129...17,330,700
Ensembl chr19:18,283,560...18,300,964 		JBrowse link
G LGALS1 galectin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:18,593,154...18,597,432
Ensembl chr22:36,426,228...36,430,356 		JBrowse link
G LOC100988550 signal transducer and activator of transcription 5A involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:15,005,025...15,029,110
Ensembl chr17:15,228,465...15,251,783 		JBrowse link
G LOXL3 lysyl oxidase like 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2A:74,598,870...74,622,502
Ensembl chr2A:76,105,957...76,128,495 		JBrowse link
G TBX21 T-box transcription factor 21 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:9,791,008...9,803,894
Ensembl chr17:9,973,920...9,985,660 		JBrowse link
G TNFSF18 TNF superfamily member 18 involved_in ISO (PMID:24107315) UniProt PMID:24107315
negative regulation of T-helper 2 cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANXA1 annexin A1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:51,647,404...51,665,990
Ensembl chr 9:71,929,728...71,948,779 		JBrowse link
G ASCL2 achaete-scute family bHLH transcription factor 2 involved_in ISO (PMID:24463518) UniProt PMID:24463518 NCBI chr11:2,305,497...2,308,080 JBrowse link
G BCL6 BCL6 transcription repressor acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 3:184,748,135...184,772,375
Ensembl chr 3:193,308,296...193,332,124 		JBrowse link
G HLX H2.0 like homeobox acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:196,465,704...196,471,803
Ensembl chr 1:201,500,470...201,506,222 		JBrowse link
G SOCS5 suppressor of cytokine signaling 5 involved_in ISO (PMID:12242343) UniProt PMID:12242343 NCBI chr2A:46,813,589...46,878,102
Ensembl chr2A:47,804,431...47,806,041 		JBrowse link
negative regulation of T-helper cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RC3H1 ring finger and CCCH-type domains 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:149,454,748...149,539,566
Ensembl chr 1:153,160,661...153,213,402 		JBrowse link
negative T cell selection term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G THEMIS thymocyte selection associated involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:125,489,491...125,685,995
Ensembl chr 6:129,601,176...129,797,112 		JBrowse link
negative thymic T cell selection term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AIRE autoimmune regulator acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr21:30,543,018...30,556,225
Ensembl chr21:43,837,340...43,848,974 		JBrowse link
G ATG5 autophagy related 5 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 6:103,997,824...104,140,931
Ensembl chr 6:107,871,208...108,013,807 		JBrowse link
G CCR7 C-C motif chemokine receptor 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:16,720,236...16,731,955
Ensembl chr17:16,949,119...16,956,370 		JBrowse link
G CD28 CD28 molecule acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr2B:90,938,795...90,971,438
Ensembl chr2B:209,076,388...209,111,213 		JBrowse link
G CD74 CD74 molecule acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 5:145,825,635...145,836,916
Ensembl chr 5:151,830,311...151,841,334 		JBrowse link
G DOCK2 dedicator of cytokinesis 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 5:165,000,368...165,447,148
Ensembl chr 5:171,778,952...172,206,238 		JBrowse link
G FAS Fas cell surface death receptor acts_upstream_of_or_within ISO (PMID:10429671) MGI PMID:10429671 NCBI chr10:85,707,457...85,741,539
Ensembl chr10:89,217,949...89,243,612 		JBrowse link
G GLI3 GLI family zinc finger 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:42,004,965...42,280,772
Ensembl chr 7:42,056,565...42,322,865 		JBrowse link
G LOC100971372 tyrosine-protein kinase ZAP-70 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr2A:101,582,567...101,613,175
Ensembl chr2A:98,613,740...98,639,088 		JBrowse link
G LOC100978919 T-cell surface glycoprotein CD3 epsilon chain acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr11:113,142,200...113,153,928
Ensembl chr11:117,074,041...117,085,625 		JBrowse link
G MINK1 misshapen like kinase 1 acts_upstream_of_or_within ISO (PMID:15608642) MGI PMID:15608642 NCBI chr17:4,879,851...4,944,374
Ensembl chr17:4,868,620...4,932,789 		JBrowse link
G PTPRC protein tyrosine phosphatase receptor type C acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:174,246,389...174,364,893
Ensembl chr 1:178,556,104...178,672,994 		JBrowse link
G SHH sonic hedgehog signaling molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:147,400,112...147,414,036
Ensembl chr 7:159,114,666...159,126,651 		JBrowse link
G SPN sialophorin acts_upstream_of_or_within ISO (PMID:10429671) MGI PMID:10429671 Ensembl chr16:30,035,243...30,036,445 JBrowse link
NK T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATF2 activating transcription factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2B:62,348,245...62,444,428
Ensembl chr2B:179,799,365...179,895,007 		JBrowse link
G CD1D CD1d molecule involved_in ISO (PMID:9133426) CACAO PMID:9133426 NCBI chr 1:133,549,258...133,557,752
Ensembl chr 1:137,341,690...137,348,173 		JBrowse link
G FOSL2 FOS like 2, AP-1 transcription factor subunit acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr2A:28,392,328...28,416,838
Ensembl chr2A:28,485,613...28,498,397 		JBrowse link
G ITK IL2 inducible T cell kinase acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 5:152,582,125...152,656,211
Ensembl chr 5:159,204,016...159,277,689 		JBrowse link
G PSAP prosaposin acts_upstream_of_or_within ISO (PMID:14684827) MGI PMID:14684827 NCBI chr10:68,286,359...68,321,349
Ensembl chr10:70,810,881...70,828,781 		JBrowse link
G STK17A serine/threonine kinase 17a involved_in ISO (PMID:26423156) MGI PMID:26423156 NCBI chr 7:40,625,069...40,668,016 JBrowse link
G TXK TXK tyrosine kinase acts_upstream_of_or_within ISO (PMID:18292523) MGI PMID:18292523 NCBI chr 4:74,039,292...74,086,744
Ensembl chr 4:84,750,804...84,818,671 		JBrowse link
G ZBTB7B zinc finger and BTB domain containing 7B involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:130,350,798...130,366,690
Ensembl chr 1:133,959,847...133,975,729 		JBrowse link
G ZNF683 zinc finger protein 683 acts_upstream_of_or_within ISO (PMID:22885984) MGI PMID:22885984 NCBI chr 1:25,622,548...25,636,106
Ensembl chr 1:26,690,359...26,703,755 		JBrowse link
NK T cell lineage commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G KCTD9 potassium channel tetramerization domain containing 9 acts_upstream_of_or_within ISO (PMID:31024568) MGI PMID:31024568 NCBI chr 8:24,708,896...24,739,197
Ensembl chr 8:21,618,042...21,648,309 		JBrowse link
G TOX thymocyte selection associated high mobility group box involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:55,246,933...55,553,839
Ensembl chr 8:56,922,773...57,219,410 		JBrowse link
plasma cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BCL6 BCL6 transcription repressor acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr 3:184,748,135...184,772,375
Ensembl chr 3:193,308,296...193,332,124 		JBrowse link
G ENPP1 ectonucleotide pyrophosphatase/phosphodiesterase 1 involved_in ISO (PMID:29259245) MGI PMID:29259245 NCBI chr 6:129,591,858...129,673,000
Ensembl chr 6:133,698,640...133,783,644 		JBrowse link
G ITM2A integral membrane protein 2A acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr  X:68,475,114...68,482,274
Ensembl chr  X:78,585,836...78,593,037 		JBrowse link
G LGALS1 galectin 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr22:18,593,154...18,597,432
Ensembl chr22:36,426,228...36,430,356 		JBrowse link
G LGALS8 galectin 8 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:212,083,584...212,112,182 JBrowse link
G NFKBIZ NFKB inhibitor zeta involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:98,914,957...98,948,467
Ensembl chr 3:105,616,645...105,628,300 		JBrowse link
G NKX2-3 NK2 homeobox 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr10:96,146,636...96,150,238 JBrowse link
positive regulation of alpha-beta T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADA adenosine deaminase acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr20:40,950,238...40,982,481
Ensembl chr20:42,044,613...42,076,868 		JBrowse link
G GLI3 GLI family zinc finger 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:42,004,965...42,280,772
Ensembl chr 7:42,056,565...42,322,865 		JBrowse link
G IHH Indian hedgehog signaling molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chr2B:106,312,472...106,319,124
Ensembl chr2B:224,906,271...224,911,506 		JBrowse link
G ITPKB inositol-trisphosphate 3-kinase B acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:202,091,263...202,198,880
Ensembl chr 1:207,084,883...207,191,678 		JBrowse link
G LOC100971372 tyrosine-protein kinase ZAP-70 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr2A:101,582,567...101,613,175
Ensembl chr2A:98,613,740...98,639,088 		JBrowse link
G NKAP NFKB activating protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:108,988,561...109,006,946
Ensembl chr  X:119,384,655...119,402,775 		JBrowse link
G PNP purine nucleoside phosphorylase acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr14:1,343,921...1,351,670
Ensembl chr14:19,396,114...19,403,907 		JBrowse link
G RHOA ras homolog family member A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:49,282,009...49,339,887 JBrowse link
G SHH sonic hedgehog signaling molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:147,400,112...147,414,036
Ensembl chr 7:159,114,666...159,126,651 		JBrowse link
G SYK spleen associated tyrosine kinase acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 9:61,859,767...61,956,619
Ensembl chr 9:89,959,599...90,056,101 		JBrowse link
positive regulation of B cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATP11C ATPase phospholipid transporting 11C involved_in ISO (PMID:21423173) UniProt PMID:21423173 NCBI chr  X:128,880,747...129,085,989
Ensembl chr  X:139,132,783...139,334,869 		JBrowse link
G BAD BCL2 associated agonist of cell death acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr11:59,626,981...59,641,824
Ensembl chr11:62,971,808...62,986,257 		JBrowse link
G CD27 CD27 molecule involved_in IEA InterPro GO_REF:0000002 NCBI chr12:6,575,104...6,582,127
Ensembl chr12:6,492,119...6,499,427 		JBrowse link
G IL2RG interleukin 2 receptor subunit gamma acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr  X:60,375,815...60,386,936
Ensembl chr  X:70,433,360...70,437,590 		JBrowse link
G IL7 interleukin 7 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 8:75,254,166...75,337,373
Ensembl chr 8:76,895,095...76,966,918 		JBrowse link
G INPP5D inositol polyphosphate-5-phosphatase D involved_in
acts_upstream_of_or_within		 IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chr2B:120,287,606...120,436,526
Ensembl chr2B:239,201,762...239,350,190 		JBrowse link
G LOC100988550 signal transducer and activator of transcription 5A acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr17:15,005,025...15,029,110
Ensembl chr17:15,228,465...15,251,783 		JBrowse link
G LOC100989105 signal transducer and activator of transcription 5B acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr17:15,040,303...15,116,682
Ensembl chr17:15,306,418...15,336,463 		JBrowse link
G MMP14 matrix metallopeptidase 14 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:3,654,125...3,665,158
Ensembl chr14:21,753,305...21,764,058 		JBrowse link
G NCKAP1L NCK associated protein 1 like involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:34,200,102...34,249,873
Ensembl chr12:34,932,470...34,977,881 		JBrowse link
G PCID2 PCI domain containing 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:94,319,699...94,350,763
Ensembl chr13:113,388,251...113,419,251 		JBrowse link
G PPP2R3C protein phosphatase 2 regulatory subunit B''gamma involved_in
acts_upstream_of_or_within		 IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chr14:15,834,603...15,871,741
Ensembl chr14:34,020,893...34,056,842 		JBrowse link
G SPI1 Spi-1 proto-oncogene involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:47,301,245...47,326,891
Ensembl chr11:47,853,991...47,880,259 		JBrowse link
G SYK spleen associated tyrosine kinase acts_upstream_of_or_within
involved_in		 IEA Ensembl GO_REF:0000107 NCBI chr 9:61,859,767...61,956,619
Ensembl chr 9:89,959,599...90,056,101 		JBrowse link
G XBP1 X-box binding protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:9,863,479...9,869,491
Ensembl chr22:27,567,041...27,571,943 		JBrowse link
positive regulation of CD4-positive, alpha-beta T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CD83 CD83 molecule acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 6:13,961,342...13,980,686
Ensembl chr 6:14,330,752...14,349,946 		JBrowse link
G FOXP3 forkhead box P3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr  X:41,550,462...41,567,492
Ensembl chr  X:49,402,652...49,417,029 		JBrowse link
G NCKAP1L NCK associated protein 1 like involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:34,200,102...34,249,873
Ensembl chr12:34,932,470...34,977,881 		JBrowse link
G SASH3 SAM and SH3 domain containing 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr  X:118,909,980...118,924,779
Ensembl chr  X:129,207,049...129,222,342 		JBrowse link
G SOCS1 suppressor of cytokine signaling 1 involved_in ISO (PMID:24880459) UniProt PMID:24880459 NCBI chr16:10,196,432...10,198,205 JBrowse link
G TNFSF4 TNF superfamily member 4 involved_in ISO (PMID:20639485) BHF-UCL PMID:20639485 NCBI chr 1:148,684,689...148,989,775
Ensembl chr 1:152,391,450...152,415,845
Ensembl chr 1:152,391,450...152,415,845 		JBrowse link
G ZBTB7B zinc finger and BTB domain containing 7B involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:130,350,798...130,366,690
Ensembl chr 1:133,959,847...133,975,729 		JBrowse link
positive regulation of CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FOXP3 forkhead box P3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr  X:41,550,462...41,567,492
Ensembl chr  X:49,402,652...49,417,029 		JBrowse link
G GIMAP5 GTPase, IMAP family member 5 ISO RGD PMID:15778366 RGD:2303772 NCBI chr 7:142,319,479...142,326,035 JBrowse link
G IL2RG interleukin 2 receptor subunit gamma acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr  X:60,375,815...60,386,936
Ensembl chr  X:70,433,360...70,437,590 		JBrowse link
G KLHL25 kelch like family member 25 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:64,448,130...64,486,254
Ensembl chr15:83,670,090...83,671,859 		JBrowse link
G LOC100987081 HLA class II histocompatibility antigen, DR alpha chain involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:32,105,421...32,110,579
Ensembl chr 6:32,982,228...32,987,417 		JBrowse link
positive regulation of CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation involved in immune response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G IFNG interferon gamma involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:65,663,764...65,668,732
Ensembl chr12:68,448,861...68,453,829 		JBrowse link
G LOC100977210 galectin-9 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:29,125,460...29,145,028
Ensembl chr17:29,623,398...29,642,959 		JBrowse link
G LOC117976679 galectin-9B involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:35,781,679...35,790,573 JBrowse link
G LOC129394382 galectin-9B-like involved_in IEA Ensembl GO_REF:0000107
positive regulation of CD8-positive, alpha-beta T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CBFB core-binding factor subunit beta involved_in ISO (PMID:18258917) UniProt PMID:18258917 NCBI chr16:47,373,543...47,446,783 JBrowse link
G LILRB4 leukocyte immunoglobulin like receptor B4 involved_in ISO (PMID:18420485) ARUK-UCL PMID:18420485 NCBI chr19:51,606,681...51,612,751 JBrowse link
G NCKAP1L NCK associated protein 1 like involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:34,200,102...34,249,873
Ensembl chr12:34,932,470...34,977,881 		JBrowse link
G RUNX3 RUNX family transcription factor 3 involved_in ISO (PMID:18258917) UniProt PMID:18258917 NCBI chr 1:24,097,321...24,164,065
Ensembl chr 1:25,073,134...25,137,335 		JBrowse link
positive regulation of cytotoxic T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SART1 spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:61,326,262...61,343,475
Ensembl chr11:64,654,470...64,670,720 		JBrowse link
G TNFSF9 TNF superfamily member 9 involved_in ISO
IEA		 RGD
TreeGrafter		 PMID:19187795 GO_REF:0000118 RGD:2317344 NCBI chr19:5,558,021...5,562,901
Ensembl chr19:6,476,941...6,483,352 		JBrowse link
positive regulation of gamma-delta T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GIMAP5 GTPase, IMAP family member 5 ISO RGD PMID:11859104 RGD:625608 NCBI chr 7:142,319,479...142,326,035 JBrowse link
G LCK LCK proto-oncogene, Src family tyrosine kinase acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:31,560,229...31,572,391
Ensembl chr 1:32,565,739...32,579,923 		JBrowse link
G LEF1 lymphoid enhancer binding factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:100,552,959...100,674,156
Ensembl chr 4:111,125,312...111,245,980 		JBrowse link
G LOC100988550 signal transducer and activator of transcription 5A acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr17:15,005,025...15,029,110
Ensembl chr17:15,228,465...15,251,783 		JBrowse link
G LOC100989105 signal transducer and activator of transcription 5B acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr17:15,040,303...15,116,682
Ensembl chr17:15,306,418...15,336,463 		JBrowse link
G NCKAP1L NCK associated protein 1 like involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:34,200,102...34,249,873
Ensembl chr12:34,932,470...34,977,881 		JBrowse link
G PTPRC protein tyrosine phosphatase receptor type C acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:174,246,389...174,364,893
Ensembl chr 1:178,556,104...178,672,994 		JBrowse link
G SOX13 SRY-box transcription factor 13 involved_in ISO (PMID:23562159) UniProt PMID:23562159 NCBI chr 1:179,675,017...179,730,628
Ensembl chr 1:184,003,907...184,016,504 		JBrowse link
G SOX4 SRY-box transcription factor 4 involved_in ISO (PMID:23562159) UniProt PMID:23562159 NCBI chr 6:21,422,846...21,427,779 JBrowse link
G SYK spleen associated tyrosine kinase acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 9:61,859,767...61,956,619
Ensembl chr 9:89,959,599...90,056,101 		JBrowse link
positive regulation of immature T cell proliferation in thymus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BLM BLM RecQ like helicase acts_upstream_of_or_within ISO (PMID:17210642) MGI PMID:17210642 NCBI chr15:69,407,248...69,508,070
Ensembl chr15:88,607,157...88,707,864 		JBrowse link
G BMI1 BMI1 proto-oncogene, polycomb ring finger involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:22,477,755...22,487,894
Ensembl chr10:22,857,776...22,863,479 		JBrowse link
G FOXP3 forkhead box P3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr  X:41,550,462...41,567,492
Ensembl chr  X:49,402,652...49,417,029 		JBrowse link
G IL1A interleukin 1 alpha involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr2A:89,273,482...89,284,421
Ensembl chr2A:113,784,854...113,795,801 		JBrowse link
G IL1B interleukin 1 beta involved_in ISO
IEA		 RGD
TreeGrafter		 PMID:8590311 GO_REF:0000118 RGD:7401228 NCBI chr2A:89,216,313...89,223,358
Ensembl chr2A:113,846,306...113,853,424 		JBrowse link
G RIPK2 receptor interacting serine/threonine kinase 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 8:86,447,216...86,480,511
Ensembl chr 8:88,398,468...88,456,268 		JBrowse link
G SHH sonic hedgehog signaling molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:147,400,112...147,414,036
Ensembl chr 7:159,114,666...159,126,651 		JBrowse link
positive regulation of lymphocyte differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G INPP5D inositol polyphosphate-5-phosphatase D acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr2B:120,287,606...120,436,526
Ensembl chr2B:239,201,762...239,350,190 		JBrowse link
G LOC100988550 signal transducer and activator of transcription 5A acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr17:15,005,025...15,029,110
Ensembl chr17:15,228,465...15,251,783 		JBrowse link
G LOC100989105 signal transducer and activator of transcription 5B acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr17:15,040,303...15,116,682
Ensembl chr17:15,306,418...15,336,463 		JBrowse link
G NCKAP1L NCK associated protein 1 like involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:34,200,102...34,249,873
Ensembl chr12:34,932,470...34,977,881 		JBrowse link
G PRKDC protein kinase, DNA-activated, catalytic subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:44,201,391...44,386,803
Ensembl chr 8:41,593,029...41,778,299 		JBrowse link
G XRCC6 X-ray repair cross complementing 6 involved_in ISO (PMID:32103174) UniProt PMID:32103174 NCBI chr22:22,516,281...22,557,379
Ensembl chr22:40,603,038...40,643,314 		JBrowse link
positive regulation of memory T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CD46 CD46 molecule involved_in ISO (PMID:12540904) UniProt PMID:12540904 NCBI chr 1:183,330,423...183,373,916
Ensembl chr 1:188,031,758...188,182,046 		JBrowse link
G IL23A interleukin 23 subunit alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:32,575,321...32,576,856
Ensembl chr12:32,828,902...32,830,617 		JBrowse link
G LOC100987081 HLA class II histocompatibility antigen, DR alpha chain involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:32,105,421...32,110,579
Ensembl chr 6:32,982,228...32,987,417 		JBrowse link
G PCK1 phosphoenolpyruvate carboxykinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:53,901,738...53,907,090
Ensembl chr20:55,179,429...55,184,920 		JBrowse link
G TNFSF4 TNF superfamily member 4 involved_in ISO (PMID:18713990) BHF-UCL PMID:18713990 NCBI chr 1:148,684,689...148,989,775
Ensembl chr 1:152,391,450...152,415,845
Ensembl chr 1:152,391,450...152,415,845 		JBrowse link
positive regulation of natural killer cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AXL AXL receptor tyrosine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:38,211,555...38,254,464
Ensembl chr19:46,719,615...46,761,747 		JBrowse link
G FLT3LG fms related receptor tyrosine kinase 3 ligand acts_upstream_of_or_within ISO (PMID:14607906) MGI PMID:14607906 NCBI chr19:46,486,169...46,499,008 JBrowse link
G GAS6 growth arrest specific 6 involved_in IEA Ensembl GO_REF:0000107 Ensembl chr13:113,968,843...114,009,562 JBrowse link
G IL15 interleukin 15 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 4:133,693,995...134,115,470
Ensembl chr 4:145,402,111...145,416,622 		JBrowse link
G IL15RA interleukin 15 receptor subunit alpha acts_upstream_of_or_within ISO (PMID:14607906) MGI PMID:14607906 NCBI chr10:5,993,583...6,019,967 JBrowse link
G IL21 interleukin 21 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 4:114,795,979...114,806,936
Ensembl chr 4:125,943,495...125,951,915 		JBrowse link
G LOC100988550 signal transducer and activator of transcription 5A acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr17:15,005,025...15,029,110
Ensembl chr17:15,228,465...15,251,783 		JBrowse link
G LOC100989105 signal transducer and activator of transcription 5B acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr17:15,040,303...15,116,682
Ensembl chr17:15,306,418...15,336,463 		JBrowse link
G RASGRP1 RAS guanyl releasing protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:17,417,684...17,494,333
Ensembl chr15:35,675,348...35,750,315 		JBrowse link
G TOX thymocyte selection associated high mobility group box acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 8:55,246,933...55,553,839
Ensembl chr 8:56,922,773...57,219,410 		JBrowse link
G ZBTB1 zinc finger and BTB domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:45,085,146...45,114,965
Ensembl chr14:63,354,458...63,359,403 		JBrowse link
positive regulation of NK T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AP3B1 adaptor related protein complex 3 subunit beta 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 5:37,015,518...37,305,769
Ensembl chr 5:37,503,162...37,840,205 		JBrowse link
G AP3D1 adaptor related protein complex 3 subunit delta 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr19:1,110,419...1,161,826
Ensembl chr19:2,085,540...2,137,593 		JBrowse link
G CD1D CD1d molecule acts_upstream_of_or_within ISO (PMID:9133426)
(PMID:10201995)		 MGI PMID:9133426 PMID:10201995 NCBI chr 1:133,549,258...133,557,752
Ensembl chr 1:137,341,690...137,348,173 		JBrowse link
G TGFBR2 transforming growth factor beta receptor 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 3:30,536,187...30,623,653
Ensembl chr 3:30,854,460...30,938,856 		JBrowse link
G ZBTB16 zinc finger and BTB domain containing 16 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:108,938,414...109,133,819
Ensembl chr11:112,780,380...112,977,164 		JBrowse link
positive regulation of plasma cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DDRGK1 DDRGK domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:3,276,292...3,290,433
Ensembl chr20:3,038,779...3,052,789 		JBrowse link
G IL10 interleukin 10 acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr 1:182,369,234...182,374,207
Ensembl chr 1:186,648,289...186,653,371 		JBrowse link
G IL2 interleukin 2 acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr 4:114,637,328...114,642,586
Ensembl chr 4:125,782,563...125,787,984 		JBrowse link
G XBP1 X-box binding protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:9,863,479...9,869,491
Ensembl chr22:27,567,041...27,571,943 		JBrowse link
positive regulation of pro-T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ZBTB1 zinc finger and BTB domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:45,085,146...45,114,965
Ensembl chr14:63,354,458...63,359,403 		JBrowse link
positive regulation of regulatory T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AMBRA1 autophagy and beclin 1 regulator 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:46,355,026...46,556,091
Ensembl chr11:46,905,454...47,103,205 		JBrowse link
G BCL6 BCL6 transcription repressor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:184,748,135...184,772,375
Ensembl chr 3:193,308,296...193,332,124 		JBrowse link
G CARMIL2 capping protein regulator and myosin 1 linker 2 acts_upstream_of_or_within ISO (PMID:23793062) MGI PMID:23793062 NCBI chr16:47,989,040...48,001,455
Ensembl chr16:67,378,353...67,390,709 		JBrowse link
G CD46 CD46 molecule involved_in ISO (PMID:12540904) UniProt PMID:12540904 NCBI chr 1:183,330,423...183,373,916
Ensembl chr 1:188,031,758...188,182,046 		JBrowse link
G CR1 complement C3b/C4b receptor 1 (Knops blood group) involved_in ISO (PMID:25742728) ARUK-UCL PMID:25742728 NCBI chr 1:183,094,601...183,246,957 JBrowse link
G DUSP10 dual specificity phosphatase 10 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:197,293,039...197,333,828
Ensembl chr 1:202,367,318...202,404,720 		JBrowse link
G FOXO3 forkhead box O3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:106,360,519...106,485,676
Ensembl chr 6:110,406,266...110,516,272 		JBrowse link
G FOXP3 forkhead box P3 involved_in
acts_upstream_of_or_within		 IEA Ensembl GO_REF:0000107 NCBI chr  X:41,550,462...41,567,492
Ensembl chr  X:49,402,652...49,417,029 		JBrowse link
G IL2 interleukin 2 ISO RGD PMID:6233372 RGD:1600097 NCBI chr 4:114,637,328...114,642,586
Ensembl chr 4:125,782,563...125,787,984 		JBrowse link
G IL4I1 interleukin 4 induced 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:46,902,656...46,942,213
Ensembl chr19:55,819,080...55,858,389 		JBrowse link
G KAT5 lysine acetyltransferase 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:61,071,118...61,078,667
Ensembl chr11:64,404,572...64,412,667 		JBrowse link
G LILRB4 leukocyte immunoglobulin like receptor B4 involved_in ISO (PMID:20935202), (PMID:22387553) BHF-UCL PMID:20935202 PMID:22387553 NCBI chr19:51,606,681...51,612,751 JBrowse link
G LOC100975566 butyrophilin subfamily 2 member A2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 6:26,215,215...26,227,261
Ensembl chr 6:26,873,828...26,885,592 		JBrowse link
G LOC100977210 galectin-9 involved_in ISO (PMID:25065622) UniProt PMID:25065622 NCBI chr17:29,125,460...29,145,028
Ensembl chr17:29,623,398...29,642,959 		JBrowse link
G LOC100978774 patr class I histocompatibility antigen, alpha chain G involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:29,616,091...29,620,270
Ensembl chr 6:30,286,395...30,390,865 		JBrowse link
G SOCS1 suppressor of cytokine signaling 1 involved_in ISO (PMID:22387553) BHF-UCL PMID:22387553 NCBI chr16:10,196,432...10,198,205 JBrowse link
G SOX12 SRY-box transcription factor 12 involved_in ISO (PMID:30190287) UniProt PMID:30190287 NCBI chr20:533,901...537,106 JBrowse link
G TGFB1 transforming growth factor beta 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:38,324,009...38,347,003
Ensembl chr19:46,831,659...46,852,973 		JBrowse link
G VSIR V-set immunoregulatory receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:68,218,230...68,243,687
Ensembl chr10:70,742,062...70,767,613 		JBrowse link
positive regulation of T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADA adenosine deaminase acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr20:40,950,238...40,982,481
Ensembl chr20:42,044,613...42,076,868 		JBrowse link
G BAD BCL2 associated agonist of cell death acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr11:59,626,981...59,641,824
Ensembl chr11:62,971,808...62,986,257 		JBrowse link
G CD27 CD27 molecule involved_in IEA InterPro GO_REF:0000002 NCBI chr12:6,575,104...6,582,127
Ensembl chr12:6,492,119...6,499,427 		JBrowse link
G CD74 CD74 molecule acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 5:145,825,635...145,836,916
Ensembl chr 5:151,830,311...151,841,334 		JBrowse link
G CYLD CYLD lysine 63 deubiquitinase acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr16:31,004,393...31,064,546
Ensembl chr16:49,882,751...49,942,629 		JBrowse link
G GATA3 GATA binding protein 3 involved_in ISO (PMID:20696860) UniProt PMID:20696860 NCBI chr10:8,075,951...8,105,573
Ensembl chr10:8,064,207...8,086,272 		JBrowse link
G IL12A interleukin 12A acts_upstream_of_or_within ISO (PMID:22968459) MGI PMID:22968459 NCBI chr 3:157,011,675...157,019,897
Ensembl chr 3:165,061,505...165,068,666 		JBrowse link
G IL1RL2 interleukin 1 receptor like 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 Ensembl chr2A:103,237,996...103,289,414 JBrowse link
G IL2 interleukin 2 ISO RGD PMID:9352365 RGD:1600138 NCBI chr 4:114,637,328...114,642,586
Ensembl chr 4:125,782,563...125,787,984 		JBrowse link
G IL2RA interleukin 2 receptor subunit alpha ISO RGD PMID:9352365 RGD:1600138 NCBI chr10:6,053,549...6,103,863 JBrowse link
G IL4 interleukin 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:128,091,342...128,099,886
Ensembl chr 5:134,253,039...134,261,581 		JBrowse link
G IL7 interleukin 7 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 8:75,254,166...75,337,373
Ensembl chr 8:76,895,095...76,966,918 		JBrowse link
G LOC100968989 HLA class II histocompatibility antigen, DM alpha chain acts_upstream_of_or_within ISO (PMID:8598041), (PMID:9432982)
(PMID:8638109)
(PMID:8598040)		 MGI PMID:8598040 PMID:8598041 PMID:8638109 PMID:9432982 NCBI chr 6:32,518,060...32,537,989
Ensembl chr 6:33,634,123...33,637,988 		JBrowse link
G LOC100971372 tyrosine-protein kinase ZAP-70 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr2A:101,582,567...101,613,175
Ensembl chr2A:98,613,740...98,639,088 		JBrowse link
G MDK midkine involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:46,339,365...46,342,388
Ensembl chr11:46,891,540...46,893,254 		JBrowse link
G PIK3R6 phosphoinositide-3-kinase regulatory subunit 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:42,782,422...42,851,692
Ensembl chr17:47,518,629...47,585,160 		JBrowse link
G PTPRC protein tyrosine phosphatase receptor type C acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:174,246,389...174,364,893
Ensembl chr 1:178,556,104...178,672,994 		JBrowse link
G RAG1 recombination activating 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:36,483,697...36,546,242
Ensembl chr11:36,412,420...36,422,904 		JBrowse link
G RHOH ras homolog family member H involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:34,517,487...34,569,934
Ensembl chr 4:40,419,549...40,420,124 		JBrowse link
G WNT10B Wnt family member 10B acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr12:39,771,163...39,785,411
Ensembl chr12:40,659,106...40,665,734 		JBrowse link
G XBP1 X-box binding protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:9,863,479...9,869,491
Ensembl chr22:27,567,041...27,571,943 		JBrowse link
G ZBTB1 zinc finger and BTB domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:45,085,146...45,114,965
Ensembl chr14:63,354,458...63,359,403 		JBrowse link
G ZMIZ1 zinc finger MIZ-type containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:75,581,794...75,829,748
Ensembl chr10:78,294,867...78,492,475 		JBrowse link
positive regulation of T cell differentiation in thymus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADA adenosine deaminase acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr20:40,950,238...40,982,481
Ensembl chr20:42,044,613...42,076,868 		JBrowse link
G ADAM8 ADAM metallopeptidase domain 8 involved_in IEA Ensembl GO_REF:0000107 Ensembl chr10:134,172,724...134,186,227 JBrowse link
G EGR3 early growth response 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 8:21,937,516...21,943,646
Ensembl chr 8:18,877,396...18,882,874 		JBrowse link
G IHH Indian hedgehog signaling molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chr2B:106,312,472...106,319,124
Ensembl chr2B:224,906,271...224,911,506 		JBrowse link
G IL2RG interleukin 2 receptor subunit gamma acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr  X:60,375,815...60,386,936
Ensembl chr  X:70,433,360...70,437,590 		JBrowse link
G IL7R interleukin 7 receptor acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 5:74,489,188...74,516,330
Ensembl chr 5:79,769,859...79,792,612 		JBrowse link
G RASGRP1 RAS guanyl releasing protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:17,417,684...17,494,333
Ensembl chr15:35,675,348...35,750,315 		JBrowse link
G SHH sonic hedgehog signaling molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:147,400,112...147,414,036
Ensembl chr 7:159,114,666...159,126,651 		JBrowse link
G TESPA1 thymocyte expressed, positive selection associated 1 involved_in ISO (PMID:22561606) UniProt PMID:22561606 NCBI chr12:33,765,283...33,800,883
Ensembl chr12:34,492,311...34,527,627 		JBrowse link
G VNN1 vanin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:130,459,268...130,491,167
Ensembl chr 6:134,566,117...134,598,784 		JBrowse link
positive regulation of T-helper 1 cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANXA1 annexin A1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:51,647,404...51,665,990
Ensembl chr 9:71,929,728...71,948,779 		JBrowse link
G CCL19 C-C motif chemokine ligand 19 involved_in ISO (PMID:15845453) BHF-UCL PMID:15845453 NCBI chr 9:34,525,820...34,527,628
Ensembl chr 9:35,334,353...35,336,108 		JBrowse link
G HLX H2.0 like homeobox acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:196,465,704...196,471,803
Ensembl chr 1:201,500,470...201,506,222 		JBrowse link
G RIPK2 receptor interacting serine/threonine kinase 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 8:86,447,216...86,480,511
Ensembl chr 8:88,398,468...88,456,268 		JBrowse link
G SOCS5 suppressor of cytokine signaling 5 involved_in ISO (PMID:12242343) UniProt PMID:12242343 NCBI chr2A:46,813,589...46,878,102
Ensembl chr2A:47,804,431...47,806,041 		JBrowse link
positive regulation of T-helper 17 cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MALT1 MALT1 paracaspase involved_in ISO (PMID:25282160) UniProt PMID:25282160 NCBI chr18:52,060,878...52,141,985
Ensembl chr18:55,395,462...55,473,574 		JBrowse link
G NFKBID NFKB inhibitor delta involved_in ISO (PMID:25282160) UniProt PMID:25282160 NCBI chr19:32,805,772...32,817,778
Ensembl chr19:41,553,727...41,568,555 		JBrowse link
G NFKBIZ NFKB inhibitor zeta involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:98,914,957...98,948,467
Ensembl chr 3:105,616,645...105,628,300 		JBrowse link
G NLRP3 NLR family pyrin domain containing 3 involved_in ISO (PMID:26098997) UniProt PMID:26098997 NCBI chr 1:223,052,307...223,084,736
Ensembl chr 1:228,505,147...228,537,216 		JBrowse link
positive regulation of T-helper 17 cell lineage commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BRD2 bromodomain containing 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:32,538,130...32,550,823
Ensembl chr 6:33,657,648...33,666,031 		JBrowse link
G BRD4 bromodomain containing 4 involved_in ISO (PMID:28262505) UniProt PMID:28262505 NCBI chr19:14,768,239...14,805,770
Ensembl chr19:15,754,930...15,789,600 		JBrowse link
G EP300 E1A binding protein p300 involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:21,986,467...22,076,921
Ensembl chr22:40,079,503...40,168,604 		JBrowse link
G IL23A interleukin 23 subunit alpha involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr12:32,575,321...32,576,856
Ensembl chr12:32,828,902...32,830,617 		JBrowse link
G OPA1 OPA1 mitochondrial dynamin like GTPase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:190,890,242...190,995,133
Ensembl chr 3:201,207,607...201,312,358 		JBrowse link
positive regulation of T-helper 2 cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G IL18 interleukin 18 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:107,024,376...107,045,194
Ensembl chr11:110,867,586...110,888,371 		JBrowse link
G IL4R interleukin 4 receptor acts_upstream_of_or_within ISO (PMID:16424184) MGI PMID:16424184 Ensembl chr16:27,642,702...27,737,445 JBrowse link
G IL6 interleukin 6 acts_upstream_of_or_within ISO (PMID:12594267) MGI PMID:12594267 NCBI chr 7:23,415,922...23,420,767 JBrowse link
G NLRP3 NLR family pyrin domain containing 3 involved_in ISO (PMID:26098997) UniProt PMID:26098997 NCBI chr 1:223,052,307...223,084,736
Ensembl chr 1:228,505,147...228,537,216 		JBrowse link
G PRKCZ protein kinase C zeta involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:763,942...901,531
Ensembl chr 1:1,920,219...2,045,855 		JBrowse link
G RARA retinoic acid receptor alpha involved_in ISO (PMID:18416830) BHF-UCL PMID:18416830 NCBI chr17:16,932,485...16,980,958 JBrowse link
G TNFSF4 TNF superfamily member 4 involved_in ISO (PMID:18354165) BHF-UCL PMID:18354165 NCBI chr 1:148,684,689...148,989,775
Ensembl chr 1:152,391,450...152,415,845
Ensembl chr 1:152,391,450...152,415,845 		JBrowse link
positive regulation of T-helper cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SHB SH2 domain containing adaptor protein B acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 9:37,768,566...37,921,897 JBrowse link
positive T cell selection term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BCL11B BCL11 transcription factor B acts_upstream_of_or_within ISO (PMID:17998389) MGI PMID:17998389 NCBI chr14:79,795,262...79,898,472 JBrowse link
G BRAF B-Raf proto-oncogene, serine/threonine kinase acts_upstream_of_or_within ISO (PMID:23334952) MGI PMID:23334952 NCBI chr 7:132,651,908...132,855,422
Ensembl chr 7:145,138,510...145,327,115 		JBrowse link
G THEMIS thymocyte selection associated involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:125,489,491...125,685,995
Ensembl chr 6:129,601,176...129,797,112 		JBrowse link
positive thymic T cell selection term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CD1D CD1d molecule acts_upstream_of_or_within ISO (PMID:9133426) MGI PMID:9133426 NCBI chr 1:133,549,258...133,557,752
Ensembl chr 1:137,341,690...137,348,173 		JBrowse link
G CD74 CD74 molecule acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 5:145,825,635...145,836,916
Ensembl chr 5:151,830,311...151,841,334 		JBrowse link
G DOCK2 dedicator of cytokinesis 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 5:165,000,368...165,447,148
Ensembl chr 5:171,778,952...172,206,238 		JBrowse link
G ITPKB inositol-trisphosphate 3-kinase B acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:202,091,263...202,198,880
Ensembl chr 1:207,084,883...207,191,678 		JBrowse link
G LOC100968989 HLA class II histocompatibility antigen, DM alpha chain acts_upstream_of_or_within ISO (PMID:8638109)
(PMID:8598040)
(PMID:8598041), (PMID:9432982)		 MGI PMID:8598040 PMID:8598041 PMID:8638109 PMID:9432982 NCBI chr 6:32,518,060...32,537,989
Ensembl chr 6:33,634,123...33,637,988 		JBrowse link
G LOC100971372 tyrosine-protein kinase ZAP-70 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr2A:101,582,567...101,613,175
Ensembl chr2A:98,613,740...98,639,088 		JBrowse link
G LOC100978919 T-cell surface glycoprotein CD3 epsilon chain involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr11:113,142,200...113,153,928
Ensembl chr11:117,074,041...117,085,625 		JBrowse link
G LOC100979261 T-cell surface glycoprotein CD3 gamma chain involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr11:113,179,270...113,190,104
Ensembl chr11:117,111,132...117,120,566 		JBrowse link
G LOC100979946 T-cell surface glycoprotein CD3 delta chain involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr11:113,174,007...113,179,244
Ensembl chr11:117,105,868...117,111,051 		JBrowse link
G NFATC3 nuclear factor of activated T cells 3 involved_in ISO (PMID:17579027) UniProt PMID:17579027 NCBI chr16:48,456,144...48,603,306
Ensembl chr16:67,888,806...67,996,274 		JBrowse link
G PTPRC protein tyrosine phosphatase receptor type C acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:174,246,389...174,364,893
Ensembl chr 1:178,556,104...178,672,994 		JBrowse link
G SHH sonic hedgehog signaling molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:147,400,112...147,414,036
Ensembl chr 7:159,114,666...159,126,651 		JBrowse link
G SRF serum response factor acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 6:42,763,099...42,773,332
Ensembl chr 6:44,057,192...44,066,768 		JBrowse link
G STK11 serine/threonine kinase 11 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 Ensembl chr19:1,188,537...1,210,677 JBrowse link
pre-B cell allelic exclusion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATM ATM serine/threonine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:103,109,979...103,256,405
Ensembl chr11:106,584,228...106,727,041 		JBrowse link
G RAG1 recombination activating 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr11:36,483,697...36,546,242
Ensembl chr11:36,412,420...36,422,904 		JBrowse link
G RAG2 recombination activating 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:36,558,419...36,564,997
Ensembl chr11:36,431,703...36,433,286 		JBrowse link
pre-B cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATP11C ATPase phospholipid transporting 11C involved_in ISO (PMID:21423173) UniProt PMID:21423173 NCBI chr  X:128,880,747...129,085,989
Ensembl chr  X:139,132,783...139,334,869 		JBrowse link
G FOXP1 forkhead box P1 acts_upstream_of_or_within ISO (PMID:16819554) MGI PMID:16819554 NCBI chr 3:70,893,933...71,523,892
Ensembl chr 3:72,258,456...72,498,173 		JBrowse link
G LOC100982539 signal transducer CD24 acts_upstream_of_or_within ISO (PMID:7795661), (PMID:9028339) MGI PMID:7795661 PMID:9028339 NCBI chr 6:104,783,720...104,789,509
Ensembl chr 6:108,655,624...108,657,847 		JBrowse link
G LRRC8A leucine rich repeat containing 8 VRAC subunit A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:100,003,969...100,039,859
Ensembl chr 9:128,670,292...128,705,466 		JBrowse link
pro-T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FLT3 fms related receptor tyrosine kinase 3 acts_upstream_of_or_within ISO (PMID:7621074) MGI PMID:7621074 NCBI chr13:9,283,747...9,381,553
Ensembl chr13:27,627,178...27,723,940 		JBrowse link
G GATA3 GATA binding protein 3 acts_upstream_of_or_within ISO (PMID:19934022) MGI PMID:19934022 NCBI chr10:8,075,951...8,105,573
Ensembl chr10:8,064,207...8,086,272 		JBrowse link
G SPI1 Spi-1 proto-oncogene involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:47,301,245...47,326,891
Ensembl chr11:47,853,991...47,880,259 		JBrowse link
regulation of alpha-beta T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANKLE1 ankyrin repeat and LEM domain containing 1 NOT|involved_in ISO (PMID:27010503) UniProt PMID:27010503 NCBI chr19:16,769,670...16,775,114
Ensembl chr19:17,744,570...17,750,070 		JBrowse link
regulation of B cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANKLE1 ankyrin repeat and LEM domain containing 1 NOT|involved_in ISO (PMID:27010503) UniProt PMID:27010503 NCBI chr19:16,769,670...16,775,114
Ensembl chr19:17,744,570...17,750,070 		JBrowse link
G CARD11 caspase recruitment domain family member 11 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 7:3,166,788...3,304,729
Ensembl chr 7:3,258,736...3,332,999 		JBrowse link
G CYLD CYLD lysine 63 deubiquitinase acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr16:31,004,393...31,064,546
Ensembl chr16:49,882,751...49,942,629 		JBrowse link
G FAS Fas cell surface death receptor acts_upstream_of_or_within ISO (PMID:6610701) MGI PMID:6610701 NCBI chr10:85,707,457...85,741,539
Ensembl chr10:89,217,949...89,243,612 		JBrowse link
G FCRL3 Fc receptor like 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:133,038,100...133,062,467
Ensembl chr 1:136,830,553...136,855,027 		JBrowse link
G IKZF3 IKAROS family zinc finger 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:17,459,438...17,498,452
Ensembl chr17:17,643,750...17,741,479 		JBrowse link
G LOC100982539 signal transducer CD24 acts_upstream_of_or_within ISO (PMID:7795661), (PMID:9028339) MGI PMID:7795661 PMID:9028339 NCBI chr 6:104,783,720...104,789,509
Ensembl chr 6:108,655,624...108,657,847 		JBrowse link
G LOC100986336 twinfilin-2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:52,163,388...52,181,473
Ensembl chr 3:53,400,191...53,410,743
Ensembl chr 3:53,400,191...53,410,743 		JBrowse link
G NFAM1 NFAT activating protein with ITAM motif 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15143214) InterPro
MGI		 PMID:15143214 GO_REF:0000002 NCBI chr22:23,276,675...23,332,932
Ensembl chr22:41,345,206...41,396,721 		JBrowse link
G PTPN6 protein tyrosine phosphatase non-receptor type 6 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr12:7,075,879...7,093,041
Ensembl chr12:6,991,099...7,008,830 		JBrowse link
G SLAMF8 SLAM family member 8 involved_in ISO (PMID:11313408) UniProt PMID:11313408 NCBI chr 1:135,178,241...135,189,005 JBrowse link
G ZFP36L1 ZFP36 ring finger protein like 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:49,372,058...49,379,116
Ensembl chr14:68,247,347...68,255,805 		JBrowse link
G ZFP36L2 ZFP36 ring finger protein like 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2A:43,311,744...43,315,928 JBrowse link
regulation of CD4-positive, alpha-beta T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SH3RF1 SH3 domain containing ring finger 1 involved_in ISO (PMID:27084103) UniProt PMID:27084103 NCBI chr 4:161,319,093...161,495,917
Ensembl chr 4:173,394,739...173,567,096 		JBrowse link
regulation of CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G KCNK18 potassium two pore domain channel subfamily K member 18 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:113,775,944...113,792,520
Ensembl chr10:117,206,815...117,219,701 		JBrowse link
regulation of CD8-positive, alpha-beta T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ZBTB7B zinc finger and BTB domain containing 7B acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:130,350,798...130,366,690
Ensembl chr 1:133,959,847...133,975,729 		JBrowse link
regulation of extrathymic T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PRDM1 PR/SET domain 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:103,899,410...103,923,389
Ensembl chr 6:107,773,229...107,796,815 		JBrowse link
G ZNF683 zinc finger protein 683 involved_in ISO (PMID:27102484) UniProt PMID:27102484 NCBI chr 1:25,622,548...25,636,106
Ensembl chr 1:26,690,359...26,703,755 		JBrowse link
regulation of gamma-delta T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EGR3 early growth response 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 8:21,937,516...21,943,646
Ensembl chr 8:18,877,396...18,882,874 		JBrowse link
G RORC RAR related orphan receptor C acts_upstream_of_or_within ISO (PMID:21737317) MGI PMID:21737317 NCBI chr 1:127,164,725...127,190,479
Ensembl chr 1:130,808,705...130,834,490 		JBrowse link
G SOX13 SRY-box transcription factor 13 acts_upstream_of_or_within ISO (PMID:21737317) MGI PMID:21737317 NCBI chr 1:179,675,017...179,730,628
Ensembl chr 1:184,003,907...184,016,504 		JBrowse link
G TCF7 transcription factor 7 involved_in ISO (PMID:23562159) UniProt PMID:23562159 NCBI chr 5:129,518,134...129,549,972
Ensembl chr 5:135,671,095...135,702,734 		JBrowse link
regulation of immature T cell proliferation in thymus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CD1D CD1d molecule involved_in ISO (PMID:11550008) CACAO PMID:11550008 NCBI chr 1:133,549,258...133,557,752
Ensembl chr 1:137,341,690...137,348,173 		JBrowse link
G TNFRSF9 TNF receptor superfamily member 9 acts_upstream_of_or_within ISO (PMID:8405064) MGI PMID:8405064 NCBI chr 1:6,681,954...6,703,813
Ensembl chr 1:7,942,641...7,949,326 		JBrowse link
G TNFSF9 TNF superfamily member 9 acts_upstream_of_or_within ISO (PMID:8405064) MGI PMID:8405064 NCBI chr19:5,558,021...5,562,901
Ensembl chr19:6,476,941...6,483,352 		JBrowse link
regulation of lymphocyte differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G IKZF3 IKAROS family zinc finger 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:17,459,438...17,498,452
Ensembl chr17:17,643,750...17,741,479 		JBrowse link
G NDFIP1 Nedd4 family interacting protein 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 5:137,467,161...137,511,569
Ensembl chr 5:143,600,789...143,622,913 		JBrowse link
G RNF41 ring finger protein 41 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr12:32,693,349...32,710,866
Ensembl chr12:32,944,814...32,962,584 		JBrowse link
regulation of memory T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BCL6 BCL6 transcription repressor acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 3:184,748,135...184,772,375
Ensembl chr 3:193,308,296...193,332,124 		JBrowse link
regulation of natural killer cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC100977210 galectin-9 involved_in ISO (PMID:23408620) UniProt PMID:23408620 NCBI chr17:29,125,460...29,145,028
Ensembl chr17:29,623,398...29,642,959 		JBrowse link
G PRDM1 PR/SET domain 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:103,899,410...103,923,389
Ensembl chr 6:107,773,229...107,796,815 		JBrowse link
G ZNF683 zinc finger protein 683 involved_in ISO (PMID:27102484) UniProt PMID:27102484 NCBI chr 1:25,622,548...25,636,106
Ensembl chr 1:26,690,359...26,703,755 		JBrowse link
regulation of natural killer cell differentiation involved in immune response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ZNF683 zinc finger protein 683 involved_in ISO (PMID:22885984) UniProt PMID:22885984 NCBI chr 1:25,622,548...25,636,106
Ensembl chr 1:26,690,359...26,703,755 		JBrowse link
regulation of NK T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PRDM1 PR/SET domain 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:103,899,410...103,923,389
Ensembl chr 6:107,773,229...107,796,815 		JBrowse link
G ZNF683 zinc finger protein 683 involved_in ISO (PMID:27102484) UniProt PMID:27102484 NCBI chr 1:25,622,548...25,636,106
Ensembl chr 1:26,690,359...26,703,755 		JBrowse link
regulation of positive thymic T cell selection term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FOXN1 forkhead box N1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:28,237,150...28,272,010
Ensembl chr17:28,740,775...28,773,592 		JBrowse link
G TOX thymocyte selection associated high mobility group box involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:55,246,933...55,553,839
Ensembl chr 8:56,922,773...57,219,410 		JBrowse link
regulation of regulatory T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CD28 CD28 molecule acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr2B:90,938,795...90,971,438
Ensembl chr2B:209,076,388...209,111,213 		JBrowse link
G DICER1 dicer 1, ribonuclease III acts_upstream_of_or_within ISO (PMID:18725527) MGI PMID:18725527 NCBI chr14:75,709,029...75,780,779
Ensembl chr14:95,036,385...95,107,940 		JBrowse link
G DROSHA drosha ribonuclease III acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 5:78,813,923...78,945,149
Ensembl chr 5:84,194,546...84,322,310 		JBrowse link
G FANCA FA complementation group A involved_in
acts_upstream_of_or_within		 IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chr16:70,495,310...70,579,275
Ensembl chr16:90,163,950...90,245,147 		JBrowse link
G FANCD2 FA complementation group D2 acts_upstream_of_or_within ISO (PMID:24501220) MGI PMID:24501220 NCBI chr 3:9,932,292...10,037,332
Ensembl chr 3:10,312,476...10,389,190 		JBrowse link
G KAT2A lysine acetyltransferase 2A involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:15,194,414...15,202,818
Ensembl chr17:15,416,075...15,424,197 		JBrowse link
G LCK LCK proto-oncogene, Src family tyrosine kinase acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:31,560,229...31,572,391
Ensembl chr 1:32,565,739...32,579,923 		JBrowse link
G PSG9 pregnancy specific beta-1-glycoprotein 9 acts_upstream_of_positive_effect ISO (PMID:27389696) UniProt PMID:27389696 NCBI chr19:40,182,939...40,199,762 JBrowse link
G SH2B3 SH2B adaptor protein 3 ISO RGD PMID:25776069 RGD:13442483 NCBI chr12:108,977,344...109,024,029 JBrowse link
G TGFB1 transforming growth factor beta 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr19:38,324,009...38,347,003
Ensembl chr19:46,831,659...46,852,973 		JBrowse link
regulation of T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABL1 ABL proto-oncogene 1, non-receptor tyrosine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:101,834,189...102,005,811
Ensembl chr 9:130,484,333...130,652,941 		JBrowse link
G ADA adenosine deaminase acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr20:40,950,238...40,982,481
Ensembl chr20:42,044,613...42,076,868 		JBrowse link
G BRAF B-Raf proto-oncogene, serine/threonine kinase acts_upstream_of_or_within ISO (PMID:18228248) MGI PMID:18228248 NCBI chr 7:132,651,908...132,855,422
Ensembl chr 7:145,138,510...145,327,115 		JBrowse link
G CARD11 caspase recruitment domain family member 11 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 7:3,166,788...3,304,729
Ensembl chr 7:3,258,736...3,332,999 		JBrowse link
G CCR2 C-C motif chemokine receptor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:46,255,725...46,263,285
Ensembl chr 3:47,361,124...47,368,312 		JBrowse link
G CRTAM cytotoxic and regulatory T cell molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:117,671,581...117,705,818
Ensembl chr11:121,591,738...121,625,738 		JBrowse link
G CYP26B1 cytochrome P450 family 26 subfamily B member 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr2A:72,172,658...72,191,410
Ensembl chr2A:73,670,830...73,686,433 		JBrowse link
G FAS Fas cell surface death receptor acts_upstream_of_or_within ISO (PMID:6610701) MGI PMID:6610701 NCBI chr10:85,707,457...85,741,539
Ensembl chr10:89,217,949...89,243,612 		JBrowse link
G IL15 interleukin 15 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 4:133,693,995...134,115,470
Ensembl chr 4:145,402,111...145,416,622 		JBrowse link
G LOC100967723 HLA class II histocompatibility antigen, DO alpha chain acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 6:32,573,975...32,579,398
Ensembl chr 6:33,689,171...33,694,576 		JBrowse link
G LOC100978670 PRELI domain-containing protein 1, mitochondrial-like involved_in IEA Ensembl GO_REF:0000107 NCBI chr2A:63,691,913...63,692,866 JBrowse link
G LOC100979921 PRELI domain-containing protein 1, mitochondrial-like involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:186,769,079...186,770,369 JBrowse link
G METTL3 methyltransferase 3, N6-adenosine-methyltransferase complex catalytic subunit involved_in ISO (PMID:28792938) UniProt PMID:28792938 NCBI chr14:2,315,868...2,329,460
Ensembl chr14:20,392,665...20,405,906 		JBrowse link
G PRELID1 PRELI domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:172,605,767...172,608,901
Ensembl chr 5:179,669,885...179,672,965 		JBrowse link
G RAG1 recombination activating 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr11:36,483,697...36,546,242
Ensembl chr11:36,412,420...36,422,904 		JBrowse link
G SLC46A2 solute carrier family 46 member 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 9:84,001,056...84,013,231
Ensembl chr 9:112,154,001...112,165,906 		JBrowse link
G TBX21 T-box transcription factor 21 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:9,791,008...9,803,894
Ensembl chr17:9,973,920...9,985,660 		JBrowse link
regulation of T cell differentiation in thymus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADA adenosine deaminase ISO RGD PMID:3876160 RGD:152995412 NCBI chr20:40,950,238...40,982,481
Ensembl chr20:42,044,613...42,076,868 		JBrowse link
G ADRM1 ADRM1 26S proteasome ubiquitin receptor involved_in ISO (PMID:21048919) BHF-UCL PMID:21048919 NCBI chr20:58,667,601...58,673,566
Ensembl chr20:59,985,358...59,991,668 		JBrowse link
G ANKLE1 ankyrin repeat and LEM domain containing 1 NOT|involved_in ISO (PMID:27010503) UniProt PMID:27010503 NCBI chr19:16,769,670...16,775,114
Ensembl chr19:17,744,570...17,750,070 		JBrowse link
G CLPTM1 CLPTM1 regulator of GABA type A receptor forward trafficking involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:41,901,649...41,940,476
Ensembl chr19:50,506,886...50,545,204 		JBrowse link
G FOXN1 forkhead box N1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr17:28,237,150...28,272,010
Ensembl chr17:28,740,775...28,773,592 		JBrowse link
G LOC100977210 galectin-9 NOT|involved_in ISO (PMID:25065622) UniProt PMID:25065622 NCBI chr17:29,125,460...29,145,028
Ensembl chr17:29,623,398...29,642,959 		JBrowse link
G SOS1 SOS Ras/Rac guanine nucleotide exchange factor 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr2A:39,019,046...39,162,248
Ensembl chr2A:39,773,760...39,911,961 		JBrowse link
G SOS2 SOS Ras/Rho guanine nucleotide exchange factor 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr14:30,707,477...30,822,029
Ensembl chr14:49,014,782...49,101,764 		JBrowse link
G ZEB1 zinc finger E-box binding homeobox 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr10:31,449,202...31,659,534
Ensembl chr10:32,046,491...32,253,550 		JBrowse link
regulation of T-helper 1 cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G IL27 interleukin 27 involved_in ISO (PMID:12734330) UniProt PMID:12734330
regulation of T-helper 17 cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CCL20 C-C motif chemokine ligand 20 NOT|involved_in ISO (PMID:19050256) UniProt PMID:19050256 NCBI chr2B:115,052,768...115,056,479
Ensembl chr2B:233,862,505...233,866,225 		JBrowse link
G CCR6 C-C motif chemokine receptor 6 NOT|involved_in ISO (PMID:19050256) UniProt PMID:19050256 NCBI chr 6:165,094,563...165,109,774
Ensembl chr 6:170,069,689...170,084,779 		JBrowse link
regulation of T-helper cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GATA3 GATA binding protein 3 acts_upstream_of_or_within ISO (PMID:18776904) MGI PMID:18776904 NCBI chr10:8,075,951...8,105,573
Ensembl chr10:8,064,207...8,086,272 		JBrowse link
G LOC100987081 HLA class II histocompatibility antigen, DR alpha chain involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:32,105,421...32,110,579
Ensembl chr 6:32,982,228...32,987,417 		JBrowse link
G ZBTB7B zinc finger and BTB domain containing 7B acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:130,350,798...130,366,690
Ensembl chr 1:133,959,847...133,975,729 		JBrowse link
regulatory T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CD28 CD28 molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chr2B:90,938,795...90,971,438
Ensembl chr2B:209,076,388...209,111,213 		JBrowse link
G FOXP3 forkhead box P3 acts_upstream_of
involved_in		 IEA Ensembl GO_REF:0000107 NCBI chr  X:41,550,462...41,567,492
Ensembl chr  X:49,402,652...49,417,029 		JBrowse link
G TGFB1 transforming growth factor beta 1 involved_in
acts_upstream_of_or_within		 IEA Ensembl GO_REF:0000107 NCBI chr19:38,324,009...38,347,003
Ensembl chr19:46,831,659...46,852,973 		JBrowse link
G USP44 ubiquitin specific peptidase 44 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:93,111,293...93,146,889
Ensembl chr12:96,503,794...96,536,094 		JBrowse link
T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADA adenosine deaminase acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr20:40,950,238...40,982,481
Ensembl chr20:42,044,613...42,076,868 		JBrowse link
G ASCL2 achaete-scute family bHLH transcription factor 2 acts_upstream_of_or_within ISO (PMID:31539517) MGI PMID:31539517 NCBI chr11:2,305,497...2,308,080 JBrowse link
G BCL11A BCL11 transcription factor A acts_upstream_of_or_within ISO (PMID:12717432) MGI PMID:12717432 NCBI chr2A:60,552,908...60,655,437
Ensembl chr2A:61,695,613...61,795,800 		JBrowse link
G BCL2 BCL2 apoptosis regulator acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr18:56,481,212...56,679,012
Ensembl chr18:59,802,443...59,992,100 		JBrowse link
G CACNB4 calcium voltage-gated channel auxiliary subunit beta 4 NOT|acts_upstream_of_or_within ISO (PMID:17028169) MGI PMID:17028169 NCBI chr2B:39,137,777...39,399,007
Ensembl chr2B:156,379,469...156,639,328 		JBrowse link
G CD4 CD4 molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:6,920,587...6,951,814
Ensembl chr12:6,834,011...6,864,204 		JBrowse link
G CHD7 chromodomain helicase DNA binding protein 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:57,091,002...57,282,471
Ensembl chr 8:58,816,840...58,945,186 		JBrowse link
G CTNNB1 catenin beta 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 3:41,104,940...41,145,934
Ensembl chr 3:41,373,726...41,414,030 		JBrowse link
G DLL4 delta like canonical Notch ligand 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:19,871,584...19,881,817
Ensembl chr15:38,121,574...38,129,471 		JBrowse link
G DTX1 deltex E3 ubiquitin ligase 1 acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr12:110,661,247...110,702,780
Ensembl chr12:114,046,700...114,085,372 		JBrowse link
G EGR1 early growth response 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 5:133,845,305...133,849,291
Ensembl chr 5:139,975,635...139,979,260 		JBrowse link
G ENPP1 ectonucleotide pyrophosphatase/phosphodiesterase 1 involved_in ISO (PMID:23169635) MGI PMID:23169635 NCBI chr 6:129,591,858...129,673,000
Ensembl chr 6:133,698,640...133,783,644 		JBrowse link
G FOSL2 FOS like 2, AP-1 transcription factor subunit acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr2A:28,392,328...28,416,838
Ensembl chr2A:28,485,613...28,498,397 		JBrowse link
G GATA3 GATA binding protein 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr10:8,075,951...8,105,573
Ensembl chr10:8,064,207...8,086,272 		JBrowse link
G GIMAP5 GTPase, IMAP family member 5 ISO RGD PMID:16103028 RGD:1579831 NCBI chr 7:142,319,479...142,326,035 JBrowse link
G GPR89A G protein-coupled receptor 89A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:122,092,157...122,154,820 JBrowse link
G HMGA1 high mobility group AT-hook 1 acts_upstream_of_or_within ISO (PMID:15713121) MGI PMID:15713121 NCBI chr 6:33,807,171...33,816,603 JBrowse link
G IKZF1 IKAROS family zinc finger 1 acts_upstream_of_or_within ISO (PMID:7923373) MGI PMID:7923373 NCBI chr 7:50,946,817...51,047,168
Ensembl chr 7:51,191,685...51,291,245 		JBrowse link
G IKZF3 IKAROS family zinc finger 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:17,459,438...17,498,452
Ensembl chr17:17,643,750...17,741,479 		JBrowse link
G IL7R interleukin 7 receptor acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 5:74,489,188...74,516,330
Ensembl chr 5:79,769,859...79,792,612 		JBrowse link
G ITPKB inositol-trisphosphate 3-kinase B acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:202,091,263...202,198,880
Ensembl chr 1:207,084,883...207,191,678 		JBrowse link
G ITPRIPL1 ITPRIP like 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr2A:102,986,844...102,990,391
Ensembl chr2A:97,248,026...97,251,064 		JBrowse link
G JAG2 jagged canonical Notch ligand 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:85,785,586...85,812,056
Ensembl chr14:105,569,837...105,585,878 		JBrowse link
G KAT7 lysine acetyltransferase 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:43,875,921...43,916,352
Ensembl chr17:48,605,488...48,645,784 		JBrowse link
G KDELR1 KDEL endoplasmic reticulum protein retention receptor 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr19:45,382,456...45,391,338
Ensembl chr19:53,975,895...53,984,914 		JBrowse link
G KIT KIT proto-oncogene, receptor tyrosine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:69,199,543...69,282,323
Ensembl chr 4:75,761,946...75,844,473 		JBrowse link
G LCK LCK proto-oncogene, Src family tyrosine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:31,560,229...31,572,391
Ensembl chr 1:32,565,739...32,579,923 		JBrowse link
G LEP leptin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:120,230,896...120,248,602
Ensembl chr 7:132,885,011...132,901,519 		JBrowse link
G LEPR leptin receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:64,772,612...64,881,886
Ensembl chr 1:66,693,926...66,764,768 		JBrowse link
G LFNG LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase involved_in ISO (PMID:19217325) UniProt PMID:19217325 NCBI chr 7:2,781,493...2,790,936 JBrowse link
G LIPA lipase A, lysosomal acid type acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr10:85,938,240...85,976,610
Ensembl chr10:89,477,082...89,516,874 		JBrowse link
G LMBR1L limb development membrane protein 1 like involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:39,639,957...39,653,736
Ensembl chr12:40,519,746...40,533,435 		JBrowse link
G LOC100971372 tyrosine-protein kinase ZAP-70 acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr2A:101,582,567...101,613,175
Ensembl chr2A:98,613,740...98,639,088 		JBrowse link
G MUC19 mucin 19, oligomeric acts_upstream_of_or_within ISO (PMID:31539517) MGI PMID:31539517 NCBI chr12:48,135,613...48,319,443 JBrowse link
G NFATC3 nuclear factor of activated T cells 3 acts_upstream_of_or_within ISO (PMID:9768749) MGI PMID:9768749 NCBI chr16:48,456,144...48,603,306
Ensembl chr16:67,888,806...67,996,274 		JBrowse link
G NFKBIZ NFKB inhibitor zeta involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:98,914,957...98,948,467
Ensembl chr 3:105,616,645...105,628,300 		JBrowse link
G NHEJ1 non-homologous end joining factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2B:106,326,596...106,419,928
Ensembl chr2B:224,926,183...225,008,788 		JBrowse link
G NRARP NOTCH regulated ankyrin repeat protein acts_upstream_of ISO (PMID:12794108) MGI PMID:12794108 NCBI chr 9:108,358,959...108,361,586 JBrowse link
G PATZ1 POZ/BTB and AT hook containing zinc finger 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr22:12,349,691...12,370,273
Ensembl chr22:30,211,812...30,232,106 		JBrowse link
G PKNOX1 PBX/knotted 1 homeobox 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr21:29,282,883...29,341,998
Ensembl chr21:42,622,065...42,647,329 		JBrowse link
G PPP3CB protein phosphatase 3 catalytic subunit beta acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr10:69,984,241...70,043,352
Ensembl chr10:72,443,051...72,501,752 		JBrowse link
G PREX1 phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr20:44,965,850...45,169,891
Ensembl chr20:46,033,937...46,226,500 		JBrowse link
G PTPN2 protein tyrosine phosphatase non-receptor type 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:1,440,837...1,538,501
Ensembl chr18:16,562,052...16,659,570 		JBrowse link
G PTPN22 protein tyrosine phosphatase non-receptor type 22 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:88,685,736...88,743,164
Ensembl chr 1:123,734,511...123,790,830 		JBrowse link
G PTPRC protein tyrosine phosphatase receptor type C involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:174,246,389...174,364,893
Ensembl chr 1:178,556,104...178,672,994 		JBrowse link
G PTPRK protein tyrosine phosphatase receptor type K ISO RGD PMID:17434290 RGD:15036800 NCBI chr 6:125,753,656...126,312,124
Ensembl chr 6:129,864,573...130,421,644 		JBrowse link
G RAG2 recombination activating 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr11:36,558,419...36,564,997
Ensembl chr11:36,431,703...36,433,286 		JBrowse link
G RHOH ras homolog family member H involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:34,517,487...34,569,934
Ensembl chr 4:40,419,549...40,420,124 		JBrowse link
G RUNX2 RUNX family transcription factor 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 6:45,003,962...45,133,148
Ensembl chr 6:46,189,432...46,524,389 		JBrowse link
G SOX4 SRY-box transcription factor 4 involved_in ISO (PMID:9174623) BHF-UCL PMID:9174623 NCBI chr 6:21,422,846...21,427,779 JBrowse link
G SP3 Sp3 transcription factor acts_upstream_of_or_within ISO (PMID:12676787) MGI PMID:12676787 NCBI chr2B:61,185,975...61,243,155
Ensembl chr2B:178,639,677...178,692,848 		JBrowse link
G TBX21 T-box transcription factor 21 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr17:9,791,008...9,803,894
Ensembl chr17:9,973,920...9,985,660 		JBrowse link
G TCIRG1 T cell immune regulator 1, ATPase H+ transporting V0 subunit a3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr11:63,120,913...63,132,831
Ensembl chr11:66,429,435...66,441,327 		JBrowse link
G TGFB1 transforming growth factor beta 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr19:38,324,009...38,347,003
Ensembl chr19:46,831,659...46,852,973 		JBrowse link
G TRAF3IP2 TRAF3 interacting protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:109,367,333...109,414,601
Ensembl chr 6:113,444,005...113,485,533 		JBrowse link
G VAV1 vav guanine nucleotide exchange factor 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr19:5,805,121...5,888,203
Ensembl chr19:6,726,578...6,806,112 		JBrowse link
G WNT10B Wnt family member 10B acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr12:39,771,163...39,785,411
Ensembl chr12:40,659,106...40,665,734 		JBrowse link
T cell differentiation in thymus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADA adenosine deaminase acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr20:40,950,238...40,982,481
Ensembl chr20:42,044,613...42,076,868 		JBrowse link
G ADAM17 ADAM metallopeptidase domain 17 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2A:9,478,080...9,545,363
Ensembl chr2A:9,641,201...9,708,054 		JBrowse link
G APC APC regulator of WNT signaling pathway acts_upstream_of_or_within ISO (PMID:16025118) MGI PMID:16025118 NCBI chr 5:108,070,697...108,208,273
Ensembl chr 5:113,904,352...114,009,709 		JBrowse link
G B2M beta-2-microglobulin acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr15:23,668,108...23,674,791
Ensembl chr15:41,836,345...41,842,991 		JBrowse link
G BCL11B BCL11 transcription factor B acts_upstream_of_or_within ISO (PMID:16670294) MGI PMID:16670294 NCBI chr14:79,795,262...79,898,472 JBrowse link
G BCL2 BCL2 apoptosis regulator acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr18:56,481,212...56,679,012
Ensembl chr18:59,802,443...59,992,100 		JBrowse link
G BRAF B-Raf proto-oncogene, serine/threonine kinase acts_upstream_of_or_within ISO (PMID:23334952) MGI PMID:23334952 NCBI chr 7:132,651,908...132,855,422
Ensembl chr 7:145,138,510...145,327,115 		JBrowse link
G CDK6 cyclin dependent kinase 6 acts_upstream_of_or_within ISO (PMID:21508411) MGI PMID:21508411 NCBI chr 7:84,603,419...84,835,082 JBrowse link
G CTNNB1 catenin beta 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 3:41,104,940...41,145,934
Ensembl chr 3:41,373,726...41,414,030 		JBrowse link
G DNAJA3 DnaJ heat shock protein family (Hsp40) member A3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr16:3,351,825...3,381,914
Ensembl chr16:4,519,965...4,550,786 		JBrowse link
G FADD Fas associated via death domain involved_in ISO (PMID:21876153) UniProt PMID:21876153 NCBI chr11:65,300,889...65,305,020 JBrowse link
G FZD5 frizzled class receptor 5 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr2B:95,003,246...95,010,577
Ensembl chr2B:213,133,017...213,134,774 		JBrowse link
G FZD7 frizzled class receptor 7 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr2B:89,290,929...89,294,873
Ensembl chr2B:207,439,942...207,446,283 		JBrowse link
G FZD8 frizzled class receptor 8 acts_upstream_of_or_within ISO (PMID:11265645) MGI PMID:11265645 NCBI chr10:35,766,112...35,770,154 JBrowse link
G GATA3 GATA binding protein 3 acts_upstream_of_or_within ISO (PMID:14670303)
(PMID:18776904)
(PMID:8945476)
(PMID:19934022)		 MGI PMID:8945476 PMID:14670303 PMID:18776904 PMID:19934022 NCBI chr10:8,075,951...8,105,573
Ensembl chr10:8,064,207...8,086,272 		JBrowse link
G GBA1 glucosylceramidase beta 1 acts_upstream_of_or_within ISO (PMID:22665763) MGI PMID:22665763 NCBI chr 1:130,579,300...130,589,560
Ensembl chr 1:134,185,385...134,194,851 		JBrowse link
G GLI3 GLI family zinc finger 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15855276) Ensembl
MGI		 PMID:15855276 GO_REF:0000107 NCBI chr 7:42,004,965...42,280,772
Ensembl chr 7:42,056,565...42,322,865 		JBrowse link
G IL2RG interleukin 2 receptor subunit gamma acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr  X:60,375,815...60,386,936
Ensembl chr  X:70,433,360...70,437,590 		JBrowse link
G IL7R interleukin 7 receptor acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr 5:74,489,188...74,516,330
Ensembl chr 5:79,769,859...79,792,612 		JBrowse link
G JMJD6 jumonji domain containing 6, arginine demethylase and lysine hydroxylase acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr17:70,789,922...70,803,791
Ensembl chr17:76,356,142...76,370,117 		JBrowse link
G LOC100972084 major histocompatibility complex class I-related gene protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:156,510,588...156,538,447
Ensembl chr 1:160,178,106...160,198,420 		JBrowse link
G LOC100978919 T-cell surface glycoprotein CD3 epsilon chain ISO RGD PMID:11896936 RGD:2313407 NCBI chr11:113,142,200...113,153,928
Ensembl chr11:117,074,041...117,085,625 		JBrowse link
G LOC100988550 signal transducer and activator of transcription 5A acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr17:15,005,025...15,029,110
Ensembl chr17:15,228,465...15,251,783 		JBrowse link
G LOC100989105 signal transducer and activator of transcription 5B acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr17:15,040,303...15,116,682
Ensembl chr17:15,306,418...15,336,463 		JBrowse link
G MAFB MAF bZIP transcription factor B acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr20:37,023,988...37,027,446
Ensembl chr20:38,127,722...38,128,693 		JBrowse link
G MPZL2 myelin protein zero like 2 acts_upstream_of_or_within ISO (PMID:19851463) MGI PMID:19851463 NCBI chr11:113,063,961...113,102,097
Ensembl chr11:117,023,102...117,034,209 		JBrowse link
G NCAPH2 non-SMC condensin II complex subunit H2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr22:30,754,994...30,771,103
Ensembl chr22:49,873,223...49,881,027 		JBrowse link
G NCOR1 nuclear receptor corepressor 1 acts_upstream_of_or_within ISO (PMID:11030619) MGI PMID:11030619 NCBI chr17:34,934,452...35,121,195 JBrowse link
G NFKBID NFKB inhibitor delta acts_upstream_of ISO (PMID:11931770) MGI PMID:11931770 NCBI chr19:32,805,772...32,817,778
Ensembl chr19:41,553,727...41,568,555 		JBrowse link
G NKAP NFKB activating protein acts_upstream_of_or_within ISO (PMID:20610818) MGI PMID:20610818 NCBI chr  X:108,988,561...109,006,946
Ensembl chr  X:119,384,655...119,402,775 		JBrowse link
G PRKDC protein kinase, DNA-activated, catalytic subunit acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 8:44,201,391...44,386,803
Ensembl chr 8:41,593,029...41,778,299 		JBrowse link
G PRR7 proline rich 7, synaptic involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:172,748,020...172,757,989
Ensembl chr 5:179,818,184...179,821,479 		JBrowse link
G PSMB11 proteasome subunit beta 11 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr14:3,861,823...3,863,949
Ensembl chr14:21,959,146...21,960,048 		JBrowse link
G RABL3 RAB, member of RAS oncogene family like 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:117,794,224...117,850,184
Ensembl chr 3:124,707,984...124,748,983 		JBrowse link
G RAG1 recombination activating 1 involved_in
acts_upstream_of_or_within		 IEA UniProt
Ensembl		 GO_REF:0000104 GO_REF:0000107 NCBI chr11:36,483,697...36,546,242
Ensembl chr11:36,412,420...36,422,904 		JBrowse link
G RAG2 recombination activating 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:36,558,419...36,564,997
Ensembl chr11:36,431,703...36,433,286 		JBrowse link
G RIPK3 receptor interacting serine/threonine kinase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:5,112,512...5,116,486
Ensembl chr14:23,235,796...23,239,821 		JBrowse link
G RORC RAR related orphan receptor C acts_upstream_of_or_within ISO (PMID:15247480) MGI PMID:15247480 NCBI chr 1:127,164,725...127,190,479
Ensembl chr 1:130,808,705...130,834,490 		JBrowse link
G RPS6 ribosomal protein S6 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 9:19,185,455...19,189,504
Ensembl chr 9:19,674,380...19,677,722 		JBrowse link
G SHH sonic hedgehog signaling molecule acts_upstream_of
involved_in		 IEA
ISO		 (PMID:19273836) Ensembl
BHF-UCL		 PMID:19273836 GO_REF:0000107 NCBI chr 7:147,400,112...147,414,036
Ensembl chr 7:159,114,666...159,126,651 		JBrowse link
G TCF3 transcription factor 3 acts_upstream_of_or_within ISO (PMID:18958875) MGI PMID:18958875 Ensembl chr19:1,582,297...1,622,025 JBrowse link
G TESPA1 thymocyte expressed, positive selection associated 1 acts_upstream_of ISO (PMID:28598420) MGI PMID:28598420 NCBI chr12:33,765,283...33,800,883
Ensembl chr12:34,492,311...34,527,627 		JBrowse link
G TP53 tumor protein p53 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr17:7,699,449...7,717,812
Ensembl chr17:7,684,922...7,706,120 		JBrowse link
G WNT1 Wnt family member 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr12:39,767,839...39,772,460
Ensembl chr12:40,648,413...40,652,583 		JBrowse link
G WNT4 Wnt family member 4 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:21,310,228...21,335,985
Ensembl chr 1:22,255,056...22,268,801 		JBrowse link
G ZBTB1 zinc finger and BTB domain containing 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr14:45,085,146...45,114,965
Ensembl chr14:63,354,458...63,359,403 		JBrowse link
G ZFP36L1 ZFP36 ring finger protein like 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:49,372,058...49,379,116
Ensembl chr14:68,247,347...68,255,805 		JBrowse link
G ZFP36L2 ZFP36 ring finger protein like 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2A:43,311,744...43,315,928 JBrowse link
T cell differentiation involved in immune response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CLEC4D C-type lectin domain family 4 member D acts_upstream_of_or_within ISO (PMID:23602766) MGI PMID:23602766 NCBI chr12:8,599,654...8,608,494
Ensembl chr12:8,814,680...8,823,484 		JBrowse link
G CLEC4E C-type lectin domain family 4 member E acts_upstream_of_or_within ISO (PMID:23602766) MGI PMID:23602766 NCBI chr12:8,620,618...8,627,610 JBrowse link
G FCER1G Fc epsilon receptor Ig involved_in
acts_upstream_of_or_within		 IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:136,627,672...136,631,696
Ensembl chr 1:140,539,555...140,544,810 		JBrowse link
G SEMA4A semaphorin 4A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:131,489,446...131,519,864
Ensembl chr 1:135,321,288...135,350,724 		JBrowse link
T cell lineage commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BCL2 BCL2 apoptosis regulator acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr18:56,481,212...56,679,012
Ensembl chr18:59,802,443...59,992,100 		JBrowse link
G FOXN1 forkhead box N1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:28,237,150...28,272,010
Ensembl chr17:28,740,775...28,773,592 		JBrowse link
G IL7 interleukin 7 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 8:75,254,166...75,337,373
Ensembl chr 8:76,895,095...76,966,918 		JBrowse link
G PRKDC protein kinase, DNA-activated, catalytic subunit acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 8:44,201,391...44,386,803
Ensembl chr 8:41,593,029...41,778,299 		JBrowse link
G RAG2 recombination activating 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr11:36,558,419...36,564,997
Ensembl chr11:36,431,703...36,433,286 		JBrowse link
G TP53 tumor protein p53 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr17:7,699,449...7,717,812
Ensembl chr17:7,684,922...7,706,120 		JBrowse link
T cell receptor V(D)J recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BCL11B BCL11 transcription factor B acts_upstream_of_or_within ISO (PMID:12717433) MGI PMID:12717433 NCBI chr14:79,795,262...79,898,472 JBrowse link
G LEF1 lymphoid enhancer binding factor 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 4:100,552,959...100,674,156
Ensembl chr 4:111,125,312...111,245,980 		JBrowse link
G LIG4 DNA ligase 4 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr13:89,336,434...89,347,418
Ensembl chr13:108,475,820...108,478,555 		JBrowse link
G PRKDC protein kinase, DNA-activated, catalytic subunit acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 8:44,201,391...44,386,803
Ensembl chr 8:41,593,029...41,778,299 		JBrowse link
G TCF7 transcription factor 7 acts_upstream_of_or_within ISO (PMID:9462507) MGI PMID:9462507 NCBI chr 5:129,518,134...129,549,972
Ensembl chr 5:135,671,095...135,702,734 		JBrowse link
T cell selection term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CD4 CD4 molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:6,920,587...6,951,814
Ensembl chr12:6,834,011...6,864,204 		JBrowse link
T follicular helper cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASCL2 achaete-scute family bHLH transcription factor 2 involved_in ISO (PMID:24463518) UniProt PMID:24463518 NCBI chr11:2,305,497...2,308,080 JBrowse link
G FOXP1 forkhead box P1 involved_in ISO (PMID:24859450) UniProt PMID:24859450 NCBI chr 3:70,893,933...71,523,892
Ensembl chr 3:72,258,456...72,498,173 		JBrowse link
G GPR183 G protein-coupled receptor 183 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:80,461,908...80,475,046
Ensembl chr13:99,601,220...99,602,305 		JBrowse link
G ICOS inducible T cell costimulator involved_in IEA Ensembl GO_REF:0000107 NCBI chr2B:91,168,998...91,193,808
Ensembl chr2B:209,307,938...209,332,734 		JBrowse link
G ICOSLG inducible T cell costimulator ligand involved_in ISO (PMID:24411167) UniProt PMID:24411167 NCBI chr21:30,474,655...30,499,302 JBrowse link
G IL21 interleukin 21 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:114,795,979...114,806,936
Ensembl chr 4:125,943,495...125,951,915 		JBrowse link
G IL6 interleukin 6 involved_in ISO (PMID:23045607) UniProt PMID:23045607 NCBI chr 7:23,415,922...23,420,767 JBrowse link
G PIK3R1 phosphoinositide-3-kinase regulatory subunit 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:45,701,219...45,786,652
Ensembl chr 5:47,267,286...47,350,960 		JBrowse link
G RC3H1 ring finger and CCCH-type domains 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:149,454,748...149,539,566
Ensembl chr 1:153,160,661...153,213,402 		JBrowse link
G RC3H2 ring finger and CCCH-type domains 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 9:93,975,164...94,031,516
Ensembl chr 9:122,313,791...122,365,102 		JBrowse link
G TBK1 TANK binding kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:24,419,271...24,469,164
Ensembl chr12:24,917,246...24,968,587 		JBrowse link
T-helper 1 cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CRACR2A calcium release activated channel regulator 2A involved_in ISO (PMID:29987160) UniProt PMID:29987160 NCBI chr12:3,729,241...3,875,715
Ensembl chr12:3,655,031...3,737,592 		JBrowse link
G HLX H2.0 like homeobox acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr 1:196,465,704...196,471,803
Ensembl chr 1:201,500,470...201,506,222 		JBrowse link
G HMGB1 high mobility group box 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:11,737,942...11,894,923
Ensembl chr13:30,174,899...30,179,527 		JBrowse link
G IL18R1 interleukin 18 receptor 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr2A:99,419,686...99,462,650 JBrowse link
G IL4R interleukin 4 receptor acts_upstream_of ISO (PMID:16424184) MGI PMID:16424184 Ensembl chr16:27,642,702...27,737,445 JBrowse link
G LEF1 lymphoid enhancer binding factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:100,552,959...100,674,156
Ensembl chr 4:111,125,312...111,245,980 		JBrowse link
G NFKBIZ NFKB inhibitor zeta involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:98,914,957...98,948,467
Ensembl chr 3:105,616,645...105,628,300 		JBrowse link
G RELB RELB proto-oncogene, NF-kB subunit acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr19:41,948,559...41,987,121
Ensembl chr19:50,554,864...50,590,223 		JBrowse link
G SEMA4A semaphorin 4A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:131,489,446...131,519,864
Ensembl chr 1:135,321,288...135,350,724 		JBrowse link
G STAT4 signal transducer and activator of transcription 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2B:78,331,402...78,549,231
Ensembl chr2B:196,247,881...196,366,011 		JBrowse link
G TMEM98 transmembrane protein 98 involved_in ISO (PMID:25946230) UniProt PMID:25946230 NCBI chr17:23,844,747...23,858,390
Ensembl chr17:24,133,357...24,146,912 		JBrowse link
T-helper 1 cell lineage commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G IL4 interleukin 4 acts_upstream_of_or_within ISO (PMID:20706986) MGI PMID:20706986 NCBI chr 5:128,091,342...128,099,886
Ensembl chr 5:134,253,039...134,261,581 		JBrowse link
G MTOR mechanistic target of rapamycin kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:9,871,700...10,028,704
Ensembl chr 1:11,093,765...11,249,841 		JBrowse link
G SPN sialophorin involved_in IEA Ensembl GO_REF:0000107 Ensembl chr16:30,035,243...30,036,445 JBrowse link
G STAT6 signal transducer and activator of transcription 6 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 Ensembl chr12:32,068,679...32,085,099 JBrowse link
G TBX21 T-box transcription factor 21 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:9,791,008...9,803,894
Ensembl chr17:9,973,920...9,985,660 		JBrowse link
T-helper 17 cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BATF basic leucine zipper ATF-like transcription factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:56,075,768...56,100,749
Ensembl chr14:74,919,115...74,943,652 		JBrowse link
G ENTPD7 ectonucleoside triphosphate diphosphohydrolase 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:96,276,454...96,323,287
Ensembl chr10:99,768,566...99,813,568 		JBrowse link
G NFKBIZ NFKB inhibitor zeta involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:98,914,957...98,948,467
Ensembl chr 3:105,616,645...105,628,300 		JBrowse link
G RORA RAR related orphan receptor A involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:39,461,553...40,200,118
Ensembl chr15:57,771,735...57,980,460 		JBrowse link
G RORC RAR related orphan receptor C acts_upstream_of_or_within
involved_in		 ISO (PMID:18792410)
(PMID:16990136), (PMID:18164222)
(PMID:20383124)		 MGI
UniProt		 PMID:16990136 PMID:18164222 PMID:18792410 PMID:20383124 NCBI chr 1:127,164,725...127,190,479
Ensembl chr 1:130,808,705...130,834,490 		JBrowse link
T-helper 17 cell lineage commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BATF basic leucine zipper ATF-like transcription factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:56,075,768...56,100,749
Ensembl chr14:74,919,115...74,943,652 		JBrowse link
G IL6 interleukin 6 involved_in ISO (PMID:27893700)
(PMID:16990136)		 UniProt PMID:16990136 PMID:27893700 NCBI chr 7:23,415,922...23,420,767 JBrowse link
G IL6R interleukin 6 receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:129,761,914...129,824,386
Ensembl chr 1:133,374,078...133,433,089 		JBrowse link
G IRF4 interferon regulatory factor 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:206,282...226,487
Ensembl chr 6:342,718...356,654 		JBrowse link
G LY9 lymphocyte antigen 9 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:136,151,608...136,185,365
Ensembl chr 1:140,075,646...140,107,784 		JBrowse link
G OTUD5 OTU deubiquitinase 5 acts_upstream_of_or_within ISO (PMID:25470037) MGI PMID:25470037 NCBI chr  X:41,219,536...41,256,219 JBrowse link
G SLAMF6 SLAM family member 6 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:135,838,862...135,878,207
Ensembl chr 1:139,761,121...139,799,348 		JBrowse link
G STAT3 signal transducer and activator of transcription 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:14,928,689...15,003,644
Ensembl chr17:15,152,358...15,227,067 		JBrowse link
T-helper 2 cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BATF basic leucine zipper ATF-like transcription factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:56,075,768...56,100,749
Ensembl chr14:74,919,115...74,943,652 		JBrowse link
G BCL3 BCL3 transcription coactivator acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr19:41,696,162...41,708,485
Ensembl chr19:50,304,171...50,313,005 		JBrowse link
G BCL6 BCL6 transcription repressor acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr 3:184,748,135...184,772,375
Ensembl chr 3:193,308,296...193,332,124 		JBrowse link
G GATA3 GATA binding protein 3 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:20706986) MGI
Ensembl		 PMID:20706986 GO_REF:0000107 NCBI chr10:8,075,951...8,105,573
Ensembl chr10:8,064,207...8,086,272 		JBrowse link
G HLX H2.0 like homeobox acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr 1:196,465,704...196,471,803
Ensembl chr 1:201,500,470...201,506,222 		JBrowse link
G IL4 interleukin 4 acts_upstream_of_or_within ISO (PMID:20706986) MGI PMID:20706986 NCBI chr 5:128,091,342...128,099,886
Ensembl chr 5:134,253,039...134,261,581 		JBrowse link
G IL4R interleukin 4 receptor acts_upstream_of ISO (PMID:16424184) MGI PMID:16424184 Ensembl chr16:27,642,702...27,737,445 JBrowse link
G IL6 interleukin 6 acts_upstream_of ISO (PMID:12594267) MGI PMID:12594267 NCBI chr 7:23,415,922...23,420,767 JBrowse link
G KMT2A lysine methyltransferase 2A involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:113,273,198...113,364,404
Ensembl chr11:117,204,820...117,290,100 		JBrowse link
G MEN1 menin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:60,159,009...60,166,222
Ensembl chr11:63,499,962...63,507,164 		JBrowse link
G MYB MYB proto-oncogene, transcription factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:132,952,728...132,990,560
Ensembl chr 6:137,048,812...137,086,194 		JBrowse link
T-helper cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATP7A ATPase copper transporting alpha acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr  X:67,093,675...67,231,318
Ensembl chr  X:77,255,312...77,342,756 		JBrowse link
G IL12B interleukin 12B involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:154,706,467...154,722,231
Ensembl chr 5:161,325,303...161,335,381 		JBrowse link
G PDP2 pyruvate dehydrogenase phosphatase catalytic subunit 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:47,195,850...47,205,214
Ensembl chr16:66,301,453...66,303,042 		JBrowse link
G PTGER4 prostaglandin E receptor 4 involved_in ISO (PMID:19465928) UniProt PMID:19465928 NCBI chr 5:69,686,906...69,700,739
Ensembl chr 5:74,731,470...74,745,148 		JBrowse link
G RORC RAR related orphan receptor C involved_in ISO (PMID:14691482) UniProt PMID:14691482 NCBI chr 1:127,164,725...127,190,479
Ensembl chr 1:130,808,705...130,834,490 		JBrowse link
thymic T cell selection term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CARD11 caspase recruitment domain family member 11 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 7:3,166,788...3,304,729
Ensembl chr 7:3,258,736...3,332,999 		JBrowse link
G GATA3 GATA binding protein 3 acts_upstream_of_or_within ISO (PMID:14670303) MGI PMID:14670303 NCBI chr10:8,075,951...8,105,573
Ensembl chr10:8,064,207...8,086,272 		JBrowse link
G ITPKB inositol-trisphosphate 3-kinase B acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:202,091,263...202,198,880
Ensembl chr 1:207,084,883...207,191,678 		JBrowse link
G JAG2 jagged canonical Notch ligand 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:85,785,586...85,812,056
Ensembl chr14:105,569,837...105,585,878 		JBrowse link
G LOC100971372 tyrosine-protein kinase ZAP-70 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr2A:101,582,567...101,613,175
Ensembl chr2A:98,613,740...98,639,088 		JBrowse link
transitional one stage B cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABL1 ABL proto-oncogene 1, non-receptor tyrosine kinase acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 9:101,834,189...102,005,811
Ensembl chr 9:130,484,333...130,652,941 		JBrowse link
G TNFSF13B TNF superfamily member 13b acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr13:89,399,044...89,438,837
Ensembl chr13:108,536,617...108,574,296 		JBrowse link
transitional two stage B cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TRAF3IP2 TRAF3 interacting protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:109,367,333...109,414,601
Ensembl chr 6:113,444,005...113,485,533 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19315
    immune system process 2521
      leukocyte activation 1005
        lymphocyte activation 816
          lymphocyte differentiation 434
            B cell differentiation + 147
            T cell differentiation + 328
            natural killer cell differentiation + 34
            negative regulation of lymphocyte differentiation + 67
            positive regulation of lymphocyte differentiation + 120
            regulation of lymphocyte differentiation + 213
Path 2
Term Annotations click to browse term
  biological_process 19315
    developmental process 6685
      cellular developmental process 4499
        cell differentiation 4498
          cell development 3201
            hemopoiesis 1031
              leukocyte differentiation 665
                mononuclear cell differentiation 537
                  lymphocyte differentiation 434
                    B cell differentiation + 147
                    T cell differentiation + 328
                    natural killer cell differentiation + 34
                    negative regulation of lymphocyte differentiation + 67
                    positive regulation of lymphocyte differentiation + 120
                    regulation of lymphocyte differentiation + 213
paths to the root