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ONTOLOGY REPORT - ANNOTATIONS


Term:actin filament-based movement
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Accession:GO:0030048 term browser browse the term
Definition:Movement of organelles or other particles along actin filaments, or sliding of actin filaments past each other, mediated by motor proteins.


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actin filament-based movement term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACTC1 actin alpha cardiac muscle 1 involved_in ISO (PMID:16611632) UniProt PMID:16611632 NCBI chr30:2,514,825...2,519,398
Ensembl chr30:2,514,824...2,519,382
JBrowse link
G MYH10 myosin heavy chain 10 acts_upstream_of_or_within ISO (PMID:15845534) MGI PMID:15845534 NCBI chr 5:33,239,800...33,360,459
Ensembl chr 5:33,241,266...33,360,934
JBrowse link
G MYH14 myosin heavy chain 14 acts_upstream_of_or_within ISO (MGI:3043535|PMID:14594953), (MGI:3587548|PMID:15845534) MGI PMID:14594953 PMID:15845534 MGI:3043535 MGI:3587548 NCBI chr 1:106,371,952...106,460,388
Ensembl chr 1:106,371,939...106,458,901
JBrowse link
G MYH6 myosin heavy chain 6 acts_upstream_of_or_within ISO (MGI:3526615|PMID:15001446) MGI PMID:15001446 MGI:3526615
G MYH9 myosin heavy chain 9 involved_in
acts_upstream_of_or_within
ISS
ISO
(PMID:15845534) UniProt
MGI
PMID:15845534 GO_REF:0000024 NCBI chr10:28,063,626...28,122,953
Ensembl chr10:28,063,624...28,122,953
JBrowse link
G MYO1B myosin IB involved_in ISO PMID:20080738
PMID:17298083
UniProt PMID:17298083 PMID:20080738 RGD:8554192 RGD:8554448 NCBI chr37:1,748,287...1,921,360
Ensembl chr37:1,747,974...1,920,349
JBrowse link
G MYO5A myosin VA acts_upstream_of_or_within ISO (MGI:3039317|PMID:15007063) RGD
MGI
PMID:15007063 PMID:16030255 MGI:3039317 RGD:1581734 NCBI chr30:17,990,521...18,122,160
Ensembl chr30:17,888,419...18,213,061
JBrowse link
G MYO6 myosin VI involved_in ISO (PMID:10519557) UniProt PMID:10519557 NCBI chr12:37,359,200...37,502,342
Ensembl chr12:37,413,570...37,500,724
JBrowse link
G MYO7A myosin VIIA involved_in ISO (PMID:21687988) RGD
UniProt
PMID:12466270 PMID:21687988 RGD:633398 NCBI chr21:21,539,735...21,624,063
Ensembl chr21:21,539,785...21,624,279
JBrowse link
G MYO9B myosin IXB involved_in ISO (PMID:11901422), (PMID:16338935), (PMID:9490638) UniProt PMID:9490638 PMID:11901422 PMID:16338935 NCBI chr20:45,512,286...45,582,619
Ensembl chr20:45,512,276...45,582,619
JBrowse link
G WAS WASP actin nucleation promoting factor acts_upstream_of_or_within ISO (MGI:2387810|PMID:12147689) MGI PMID:12147689 MGI:2387810 NCBI chr  X:41,882,240...41,890,053
Ensembl chr  X:41,882,875...41,890,058
JBrowse link
G WASF2 WASP family member 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2668778|PMID:12853475) Ensembl
MGI
PMID:12853475 GO_REF:0000107 MGI:2668778 NCBI chr 2:72,800,959...72,873,728
Ensembl chr 2:72,850,525...72,872,403
JBrowse link
G WIPF1 WAS/WASL interacting protein family member 1 involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:21873635)
(MGI:2387810|PMID:12147689)
GO_Central
MGI
PMID:12147689 PMID:21873635 MGI:2387810 NCBI chr36:18,574,298...18,653,255
Ensembl chr36:18,576,813...18,697,103
JBrowse link
G WIPF2 WAS/WASL interacting protein family member 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 9:22,320,321...22,372,907
Ensembl chr 9:22,325,183...22,364,545
JBrowse link
actin-mediated cell contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACTC1 actin alpha cardiac muscle 1 acts_upstream_of_or_within ISO (MGI:5468414|PMID:22750946) MGI PMID:22750946 MGI:5468414 NCBI chr30:2,514,825...2,519,398
Ensembl chr30:2,514,824...2,519,382
JBrowse link
G EMP2 epithelial membrane protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:32,026,908...32,060,447
Ensembl chr 6:32,026,916...32,057,693
JBrowse link
G MYH2 myosin heavy chain 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:34,810,791...34,838,177
Ensembl chr 5:34,810,921...34,837,904
JBrowse link
G PARVA parvin alpha involved_in ISO (MGI:4368016|PMID:19798050) UniProt PMID:19798050 MGI:4368016 NCBI chr21:35,382,447...35,536,791
Ensembl chr21:35,382,462...35,536,776
JBrowse link
G PDPN podoplanin involved_in IBA
ISS
(PMID:21873635) GO_Central
UniProt
PMID:21873635 GO_REF:0000024 NCBI chr 2:83,552,735...83,581,375
Ensembl chr 2:83,552,830...83,581,375
JBrowse link
actin-myosin filament sliding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACTC1 actin alpha cardiac muscle 1 involved_in ISO (PMID:19799913) BHF-UCL PMID:19799913 NCBI chr30:2,514,825...2,519,398
Ensembl chr30:2,514,824...2,519,382
JBrowse link
apical constriction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CCDC88C coiled-coil domain containing 88C involved_in ISO (PMID:30948426) UniProt PMID:30948426 NCBI chr 8:62,123,934...62,245,485
Ensembl chr 8:62,143,029...62,245,491
JBrowse link
G EPB41L5 erythrocyte membrane protein band 4.1 like 5 acts_upstream_of_or_within ISO (MGI:4438998|PMID:20103536) MGI PMID:20103536 MGI:4438998 NCBI chr19:29,916,994...30,063,243
Ensembl chr19:29,921,636...30,063,216
JBrowse link
G FRMD6 FERM domain containing 6 acts_upstream_of_or_within ISO (MGI:5086051|PMID:21685893) MGI PMID:21685893 MGI:5086051 NCBI chr 8:27,757,320...27,989,319
Ensembl chr 8:27,952,398...27,987,024
JBrowse link
G PARD3 par-3 family cell polarity regulator acts_upstream_of_or_within ISO (MGI:5086051|PMID:21685893) MGI PMID:21685893 MGI:5086051 NCBI chr 2:2,252,262...2,791,459
Ensembl chr 2:2,076,502...2,789,886
JBrowse link
G ROCK1 Rho associated coiled-coil containing protein kinase 1 acts_upstream_of_or_within ISO (MGI:5086051|PMID:21685893) MGI PMID:21685893 MGI:5086051 NCBI chr 7:66,862,614...67,001,538
Ensembl chr 7:66,862,608...67,142,853
JBrowse link
atrial cardiac muscle cell action potential term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANK2 ankyrin 2 involved_in ISO (PMID:17242276), (PMID:18832177), (PMID:21859974)
(MGI:5427070|PMID:21859974)
BHF-UCL PMID:17242276 PMID:18832177 PMID:21859974 MGI:5427070 NCBI chr32:32,484,196...33,143,295
Ensembl chr32:32,671,281...33,141,036
JBrowse link
G KCNA5 potassium voltage-gated channel subfamily A member 5 involved_in ISO (PMID:19343045), (PMID:23264583) BHF-UCL PMID:19343045 PMID:23264583 NCBI chr27:39,808,987...39,810,789
Ensembl chr27:39,756,363...39,811,035
JBrowse link
G KCNE5 potassium voltage-gated channel subfamily E regulatory subunit 5 involved_in ISO (PMID:18313602) BHF-UCL PMID:18313602 NCBI chr  X:82,844,188...82,845,641
Ensembl chr  X:82,845,064...82,846,083
JBrowse link
G KCNQ1 potassium voltage-gated channel subfamily Q member 1 involved_in ISO (PMID:12522251) BHF-UCL PMID:12522251 NCBI chr18:46,554,390...46,830,533
Ensembl chr18:46,518,908...46,830,043
JBrowse link
G NUP155 nucleoporin 155 acts_upstream_of_or_within ISO (MGI:3839697|PMID:19070573) MGI PMID:19070573 MGI:3839697 NCBI chr 4:71,340,109...71,409,286
Ensembl chr 4:71,340,168...71,408,038
JBrowse link
G SCN3B sodium voltage-gated channel beta subunit 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:10,783,235...10,808,342
Ensembl chr 5:10,783,325...10,804,242
JBrowse link
G SCN5A sodium voltage-gated channel alpha subunit 5 involved_in ISO (PMID:18065446) BHF-UCL PMID:18065446 NCBI chr23:8,278,844...8,374,614
Ensembl chr23:8,280,793...8,358,560
JBrowse link
cardiac muscle cell action potential involved in contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CACNA1C calcium voltage-gated channel subunit alpha1 C involved_in ISO (PMID:15454078) BHF-UCL PMID:15454078 NCBI chr27:44,007,363...44,748,251
Ensembl chr27:44,008,020...44,746,429
JBrowse link
G CACNA1D calcium voltage-gated channel subunit alpha1 D involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:36,189,986...36,488,460
Ensembl chr20:36,191,810...36,613,686
JBrowse link
G CACNA1G calcium voltage-gated channel subunit alpha1 G involved_in ISO (MGI:3714901|PMID:16690884) BHF-UCL PMID:16690884 MGI:3714901 NCBI chr 9:26,481,148...26,544,511
Ensembl chr 9:26,481,652...26,544,845
JBrowse link
G CACNA2D1 calcium voltage-gated channel auxiliary subunit alpha2delta 1 involved_in ISO (PMID:25527503) BHF-UCL PMID:25527503 NCBI chr18:21,561,091...21,949,970
Ensembl chr18:21,564,676...21,949,544
JBrowse link
G KCND3 potassium voltage-gated channel subfamily D member 3 acts_upstream_of_or_within ISO (MGI:6402838|PMID:32109384) MGI PMID:32109384 MGI:6402838 NCBI chr17:63,470,829...63,668,354
Ensembl chr17:63,470,415...63,668,035
JBrowse link
G KCNE1 potassium voltage-gated channel subfamily E regulatory subunit 1 involved_in ISO (PMID:10400998) BHF-UCL PMID:10400998 NCBI chr31:29,858,428...29,868,315 JBrowse link
G KCNE2 potassium voltage-gated channel subfamily E regulatory subunit 2 involved_in ISO (PMID:10219239) BHF-UCL PMID:10219239 NCBI chr31:29,777,154...29,777,839
Ensembl chr31:29,581,658...29,777,525
JBrowse link
G KCNJ2 potassium inwardly rectifying channel subfamily J member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:16,468,938...16,475,722
Ensembl chr 9:16,468,938...16,475,722
JBrowse link
G PKP2 plakophilin 2 involved_in ISO (PMID:22889254) BHF-UCL PMID:22889254 NCBI chr27:16,023,186...16,109,978
Ensembl chr27:16,023,224...16,109,603
JBrowse link
G SCN1A sodium voltage-gated channel alpha subunit 1 involved_in ISO (PMID:27207958) BHF-UCL PMID:27207958 NCBI chr36:11,105,936...11,245,978
Ensembl chr36:11,108,050...11,183,496
JBrowse link
G SCN1B sodium voltage-gated channel beta subunit 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:117,504,428...117,510,666
Ensembl chr 1:117,503,828...117,511,727
JBrowse link
G SCN2B sodium voltage-gated channel beta subunit 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 5:15,514,760...15,534,179
Ensembl chr 5:15,521,481...15,534,179
JBrowse link
G SCN3B sodium voltage-gated channel beta subunit 3 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 5:10,783,235...10,808,342
Ensembl chr 5:10,783,325...10,804,242
JBrowse link
G SCN4B sodium voltage-gated channel beta subunit 4 involved_in ISO (PMID:17592081) BHF-UCL PMID:17592081 NCBI chr 5:15,552,347...15,564,085
Ensembl chr 5:15,543,632...15,563,486
JBrowse link
G SCN5A sodium voltage-gated channel alpha subunit 5 involved_in
acts_upstream_of_or_within
ISO (PMID:21895525)
(MGI:6402838|PMID:32109384)
BHF-UCL
MGI
PMID:21895525 PMID:32109384 MGI:6402838 NCBI chr23:8,278,844...8,374,614
Ensembl chr23:8,280,793...8,358,560
JBrowse link
cardiac muscle cell contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CAMK2D calcium/calmodulin dependent protein kinase II delta involved_in ISO PMID:12676814 BHF-UCL PMID:12676814 RGD:8656014 NCBI chr32:33,223,093...33,525,783
Ensembl chr32:33,224,716...33,525,371
JBrowse link
G GSN gelsolin involved_in ISO (MGI:6450443|PMID:30568254) BHF-UCL PMID:30568254 MGI:6450443 NCBI chr11:74,248,227...74,268,129
Ensembl chr11:74,233,457...74,268,129
JBrowse link
G PIK3CA phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr34:12,600,140...12,681,905
Ensembl chr34:12,600,233...12,675,910
JBrowse link
G SGCD sarcoglycan delta acts_upstream_of_or_within ISO (MGI:1343715|PMID:10481911) MGI PMID:10481911 MGI:1343715 NCBI chr 4:53,259,332...54,178,228
Ensembl chr 4:53,263,866...53,820,231
JBrowse link
G SLC9A1 solute carrier family 9 member A1 ISO RGD PMID:20868366 RGD:7349316 NCBI chr 2:73,054,742...73,103,364
Ensembl chr 2:73,054,742...73,103,364
JBrowse link
cytoplasmic actin-based contraction involved in cell motility term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LIMCH1 LIM and calponin homology domains 1 involved_in ISO (PMID:28228547) CACAO PMID:28228547 NCBI chr13:38,518,653...38,816,804
Ensembl chr13:38,518,644...38,814,369
JBrowse link
G SHTN1 shootin 1 involved_in ISO PMID:23453953 UniProt PMID:23453953 RGD:10054078 NCBI chr28:27,422,086...27,517,190
Ensembl chr28:27,421,579...27,517,935
JBrowse link
G VIL1 villin 1 involved_in ISO (PMID:15342783) UniProt PMID:15342783 NCBI chr37:25,065,887...25,090,238
Ensembl chr37:25,065,180...25,090,705
JBrowse link
membrane depolarization during atrial cardiac muscle cell action potential term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CACNA1C calcium voltage-gated channel subunit alpha1 C involved_in ISO (PMID:17224476) BHF-UCL PMID:17224476 NCBI chr27:44,007,363...44,748,251
Ensembl chr27:44,008,020...44,746,429
JBrowse link
G CACNB2 calcium voltage-gated channel auxiliary subunit beta 2 involved_in ISO (PMID:17224476) BHF-UCL PMID:17224476 NCBI chr 2:18,537,100...18,787,728
Ensembl chr 2:18,538,620...18,902,286
JBrowse link
G SCN5A sodium voltage-gated channel alpha subunit 5 involved_in ISO (PMID:18065446) BHF-UCL PMID:18065446 NCBI chr23:8,278,844...8,374,614
Ensembl chr23:8,280,793...8,358,560
JBrowse link
membrane repolarization during atrial cardiac muscle cell action potential term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G KCNA5 potassium voltage-gated channel subfamily A member 5 involved_in ISO (PMID:19343045), (PMID:23264583) BHF-UCL PMID:19343045 PMID:23264583 NCBI chr27:39,808,987...39,810,789
Ensembl chr27:39,756,363...39,811,035
JBrowse link
G KCNJ5 potassium inwardly rectifying channel subfamily J member 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:5,736,544...5,760,705
Ensembl chr 5:5,740,176...5,760,866
JBrowse link
G KCNN2 potassium calcium-activated channel subfamily N member 2 involved_in ISO (MGI:5292192|PMID:19139040) BHF-UCL PMID:19139040 MGI:5292192 NCBI chr11:4,279,362...4,423,080
Ensembl chr11:4,154,746...4,423,078
JBrowse link
G KCNQ1 potassium voltage-gated channel subfamily Q member 1 involved_in ISO (PMID:12522251), (PMID:25786344) BHF-UCL PMID:12522251 PMID:25786344 NCBI chr18:46,554,390...46,830,533
Ensembl chr18:46,518,908...46,830,043
JBrowse link
membrane repolarization during ventricular cardiac muscle cell action potential term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G KCNE1 potassium voltage-gated channel subfamily E regulatory subunit 1 involved_in IEA GOC GO_REF:0000108 NCBI chr31:29,858,428...29,868,315 JBrowse link
G KCNE2 potassium voltage-gated channel subfamily E regulatory subunit 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr31:29,777,154...29,777,839
Ensembl chr31:29,581,658...29,777,525
JBrowse link
G KCNE3 potassium voltage-gated channel subfamily E regulatory subunit 3 involved_in IEA GOC GO_REF:0000108 NCBI chr21:23,860,727...23,872,194
Ensembl chr21:23,871,648...23,871,947
JBrowse link
G KCNH2 potassium voltage-gated channel subfamily H member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:15,009,031...15,041,786
Ensembl chr16:15,009,031...15,041,504
JBrowse link
G KCNJ8 potassium inwardly rectifying channel subfamily J member 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr27:25,368,565...25,375,754
Ensembl chr27:25,368,810...25,375,009
JBrowse link
G KCNQ1 potassium voltage-gated channel subfamily Q member 1 involved_in ISO (PMID:8528244) BHF-UCL PMID:8528244 NCBI chr18:46,554,390...46,830,533
Ensembl chr18:46,518,908...46,830,043
JBrowse link
mitochondrion migration along actin filament term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MYO19 myosin XIX acts_upstream_of_or_within ISO (PMID:19932026) MGI PMID:19932026 NCBI chr 9:36,383,777...36,429,730
Ensembl chr 9:36,349,191...36,428,091
JBrowse link
muscle filament sliding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MYH6 myosin heavy chain 6 involved_in ISO (PMID:16088376) HGNC-UCL PMID:16088376
G MYH7 myosin heavy chain 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:3,660,155...3,677,650
Ensembl chr 8:3,629,585...3,792,725
JBrowse link
G MYH8 myosin heavy chain 8 involved_in ISO (PMID:17041932) BHF-UCL PMID:17041932 NCBI chr 5:34,696,377...34,725,515
Ensembl chr 5:34,696,371...34,723,574
JBrowse link
G TNNT2 troponin T2, cardiac type involved_in ISO (PMID:12186860), (PMID:15923195) UniProt PMID:12186860 PMID:15923195 NCBI chr 7:1,598,306...1,620,531
Ensembl chr 7:1,598,306...1,613,741
JBrowse link
G TPM1 tropomyosin 1 involved_in ISO PMID:11136687 BHF-UCL PMID:11136687 RGD:1556479 NCBI chr30:27,636,407...27,664,907
Ensembl chr30:27,636,283...27,664,442
JBrowse link
myofibroblast contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EPDR1 ependymin related 1 involved_in ISO (PMID:27245865) UniProt PMID:27245865 NCBI chr18:11,989,898...12,013,017
Ensembl chr18:11,990,936...11,992,596
JBrowse link
negative regulation of hepatic stellate cell contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NOS1 nitric oxide synthase 1 ISO RGD PMID:10727442 RGD:13824993 NCBI chr26:13,787,341...13,895,176
Ensembl chr26:13,786,309...13,962,332
JBrowse link
negative regulation of membrane repolarization during ventricular cardiac muscle cell action potential term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G KCNE3 potassium voltage-gated channel subfamily E regulatory subunit 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:23,860,727...23,872,194
Ensembl chr21:23,871,648...23,871,947
JBrowse link
negative regulation of muscle filament sliding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DBN1 drebrin 1 ISO RGD PMID:17543276 RGD:10398727 NCBI chr 4:35,899,969...35,913,015
Ensembl chr 4:35,889,392...35,912,507
JBrowse link
negative regulation of ventricular cardiac muscle cell action potential term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BIN1 bridging integrator 1 involved_in ISO (MGI:5583915|PMID:24836577) ARUK-UCL PMID:24836577 MGI:5583915 NCBI chr19:23,503,934...23,534,407
Ensembl chr19:23,375,363...23,534,303
JBrowse link
nuclear migration along microfilament term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SUN2 Sad1 and UNC84 domain containing 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:26,055,508...26,074,972
Ensembl chr10:26,055,536...26,074,434
JBrowse link
G SYNE2 spectrin repeat containing nuclear envelope protein 2 involved_in ISO (MGI:4888085|PMID:20724637) UniProt PMID:20724637 MGI:4888085 NCBI chr 8:38,373,900...38,643,544
Ensembl chr 8:38,373,964...38,643,240
JBrowse link
positive regulation of atrial cardiac muscle cell action potential term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TRPM4 transient receptor potential cation channel subfamily M member 4 ISO RGD PMID:23954346 RGD:10003031 NCBI chr 1:107,261,760...107,304,157
Ensembl chr 1:107,261,756...107,303,346
JBrowse link
positive regulation of cardiac muscle cell contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CACNA1H calcium voltage-gated channel subunit alpha1 H ISO RGD PMID:19443576 RGD:7205486 NCBI chr 6:39,510,129...39,533,129
Ensembl chr 6:39,510,121...39,533,753
JBrowse link
G STRIT1 small transmembrane regulator of ion transport 1 involved_in ISO (MGI:6304509|PMID:30299255) UniProt PMID:30299255 MGI:6304509 NCBI chr23:49,131,218...49,134,728
Ensembl chr23:49,131,221...49,134,942
JBrowse link
positive regulation of hepatic stellate cell contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACTA2 actin alpha 2, smooth muscle ISO RGD PMID:24204762 RGD:12879446 NCBI chr26:38,700,434...38,714,915
Ensembl chr26:38,700,480...38,711,753
JBrowse link
positive regulation of myofibroblast contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PTGER3 prostaglandin E receptor 3 ISO RGD PMID:19239477 RGD:10045899 NCBI chr 6:74,932,789...74,986,573 JBrowse link
positive regulation of voltage-gated potassium channel activity involved in ventricular cardiac muscle cell action potential repolarization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RNF207 ring finger protein 207 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:60,105,200...60,119,902
Ensembl chr 5:60,106,297...60,118,670
JBrowse link
regulation of atrial cardiac muscle cell action potential term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANK2 ankyrin 2 involved_in ISO (MGI:2449848|PMID:12571597)
(PMID:12571597)
BHF-UCL PMID:12571597 MGI:2449848 NCBI chr32:32,484,196...33,143,295
Ensembl chr32:32,671,281...33,141,036
JBrowse link
G GJA5 gap junction protein alpha 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:58,289,327...58,305,315
Ensembl chr17:58,289,327...58,305,315
JBrowse link
G RYR2 ryanodine receptor 2 involved_in ISO (PMID:17875969) BHF-UCL PMID:17875969 NCBI chr 4:2,371,868...2,908,132
Ensembl chr 4:2,373,114...2,907,875
JBrowse link
regulation of cardiac muscle cell action potential involved in regulation of contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AKAP9 A-kinase anchoring protein 9 involved_in ISO (PMID:18093912) BHF-UCL PMID:18093912 NCBI chr14:17,590,256...17,743,646
Ensembl chr14:17,590,772...17,740,294
JBrowse link
G ATP2A2 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2 involved_in ISO PMID:9851937 BHF-UCL PMID:9851937 RGD:10047146 NCBI chr26:8,148,181...8,209,392
Ensembl chr26:8,148,236...8,209,388
JBrowse link
G CAV3 caveolin 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:9,384,901...9,398,055
Ensembl chr20:9,384,901...9,401,196
JBrowse link
G FGF13 fibroblast growth factor 13 involved_in ISO (MGI:5437408|PMID:21817159) BHF-UCL PMID:21817159 MGI:5437408 NCBI chr  X:108,658,113...109,156,096
Ensembl chr  X:108,658,941...109,156,594
JBrowse link
G HCN4 hyperpolarization activated cyclic nucleotide gated potassium channel 4 involved_in ISO (PMID:16407510) BHF-UCL PMID:16407510 NCBI chr30:36,637,492...36,656,194
Ensembl chr30:36,639,908...36,656,406
JBrowse link
G RANGRF RAN guanine nucleotide release factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:33,084,355...33,085,810
Ensembl chr 5:33,084,397...33,085,812
JBrowse link
regulation of cardiac muscle cell contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADORA1 adenosine A1 receptor ISO RGD PMID:19525381 RGD:2317914 NCBI chr 7:44,819...74,217
Ensembl chr 7:44,820...73,051
JBrowse link
G ADRB1 adrenoceptor beta 1 ISO RGD PMID:19525381 PMID:22216755 RGD:2317914 RGD:6893639 NCBI chr28:24,908,224...24,909,684
Ensembl chr28:24,908,224...24,909,684
JBrowse link
G AKAP6 A-kinase anchoring protein 6 involved_in ISO PMID:11179196 BHF-UCL PMID:11179196 RGD:8553373 NCBI chr 8:11,403,655...11,882,684
Ensembl chr 8:11,406,280...11,874,406
JBrowse link
G ANK2 ankyrin 2 involved_in ISO (PMID:17242276)
(MGI:3771114|PMID:17242276)
BHF-UCL PMID:17242276 MGI:3771114 NCBI chr32:32,484,196...33,143,295
Ensembl chr32:32,671,281...33,141,036
JBrowse link
G ATP1A1 ATPase Na+/K+ transporting subunit alpha 1 ISO RGD PMID:15629895 RGD:6903236 NCBI chr17:53,828,482...53,847,043
Ensembl chr17:53,813,976...53,847,167
JBrowse link
G CASQ2 calsequestrin 2 involved_in ISO PMID:17569730 BHF-UCL PMID:17569730 RGD:2314601 NCBI chr17:53,233,966...53,299,093
Ensembl chr17:53,224,438...53,299,708
JBrowse link
G FXYD1 FXYD domain containing ion transport regulator 1 ISO RGD PMID:14684371 RGD:9685468 NCBI chr 1:117,436,239...117,440,619
Ensembl chr 1:117,430,865...117,439,718
JBrowse link
G GATA4 GATA binding protein 4 ISO RGD PMID:21702924 RGD:7207043 NCBI chr25:26,126,172...26,211,474
Ensembl chr25:26,127,853...26,182,989
JBrowse link
G KCNJ2 potassium inwardly rectifying channel subfamily J member 2 ISO RGD PMID:22426100 RGD:7247430 NCBI chr 9:16,468,938...16,475,722
Ensembl chr 9:16,468,938...16,475,722
JBrowse link
G PDE4B phosphodiesterase 4B involved_in ISO (MGI:5286798|PMID:21670503) BHF-UCL PMID:21670503 MGI:5286798 NCBI chr 5:44,063,145...44,606,070
Ensembl chr 5:44,065,106...44,500,999
JBrowse link
G PDE4D phosphodiesterase 4D involved_in IBA
ISO
(PMID:21873635) GO_Central
RGD
PMID:19801680 PMID:21873635 RGD:7327160 NCBI chr 2:45,843,767...47,245,263
Ensembl chr 2:45,846,294...46,949,912
JBrowse link
G PLN phospholamban involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3655311|PMID:8620604) Ensembl
MGI
PMID:8620604 GO_REF:0000107 MGI:3655311 NCBI chr 1:58,579,095...58,590,541
Ensembl chr 1:58,579,145...58,590,535
JBrowse link
G SCN5A sodium voltage-gated channel alpha subunit 5 acts_upstream_of_or_within
involved_in
ISO (MGI:3695100|PMID:16172272)
(PMID:22529811)
MGI
BHF-UCL
PMID:16172272 PMID:22529811 MGI:3695100 NCBI chr23:8,278,844...8,374,614
Ensembl chr23:8,280,793...8,358,560
JBrowse link
G SRI sorcin involved_in ISO (PMID:12754254), (PMID:17130302) BHF-UCL PMID:12754254 PMID:17130302 NCBI chr14:14,257,375...14,274,816
Ensembl chr14:14,260,052...14,274,801
JBrowse link
G STC1 stanniocalcin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr25:33,615,436...33,628,138
Ensembl chr25:33,615,451...33,625,218
JBrowse link
G SUMO1 small ubiquitin like modifier 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr37:11,199,937...11,229,743
Ensembl chr37:11,200,590...11,229,754
JBrowse link
regulation of muscle filament sliding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MYLK2 myosin light chain kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr24:21,284,309...21,297,889
Ensembl chr24:21,284,352...21,309,363
JBrowse link
regulation of muscle filament sliding speed term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TNNC1 troponin C1, slow skeletal and cardiac type involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:37,313,983...37,317,288
Ensembl chr20:37,311,966...37,317,321
JBrowse link
G TNNT2 troponin T2, cardiac type involved_in ISO PMID:10747195 BHF-UCL PMID:10747195 RGD:8554013 NCBI chr 7:1,598,306...1,620,531
Ensembl chr 7:1,598,306...1,613,741
JBrowse link
regulation of myofibroblast contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PDPN podoplanin involved_in ISS
IBA
(PMID:21873635) UniProt
GO_Central
PMID:21873635 GO_REF:0000024 NCBI chr 2:83,552,735...83,581,375
Ensembl chr 2:83,552,830...83,581,375
JBrowse link
regulation of ventricular cardiac muscle cell action potential term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CACNA1C calcium voltage-gated channel subunit alpha1 C involved_in ISO (PMID:15454078), (PMID:26253506) BHF-UCL PMID:15454078 PMID:26253506 NCBI chr27:44,007,363...44,748,251
Ensembl chr27:44,008,020...44,746,429
JBrowse link
G CAV1 caveolin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:55,458,934...55,494,563
Ensembl chr14:55,461,048...55,492,935
JBrowse link
G CTNNA3 catenin alpha 3 involved_in ISO (PMID:23136403) BHF-UCL PMID:23136403 NCBI chr 4:17,364,121...19,035,836
Ensembl chr 4:17,372,245...19,017,093
JBrowse link
G DLG1 discs large MAGUK scaffold protein 1 involved_in ISO (MGI:5816439|PMID:25447080) BHF-UCL PMID:25447080 MGI:5816439 NCBI chr33:30,016,323...30,253,180
Ensembl chr33:30,016,600...30,253,547
JBrowse link
G DSC2 desmocollin 2 involved_in ISO (PMID:23863954) BHF-UCL PMID:23863954 NCBI chr 7:58,369,316...58,402,028
Ensembl chr 7:58,322,959...58,457,978
JBrowse link
G DSG2 desmoglein 2 involved_in ISO (PMID:16505173), (PMID:23381804) BHF-UCL PMID:16505173 PMID:23381804 NCBI chr 7:57,981,918...58,030,197
Ensembl chr 7:57,982,825...58,077,926
JBrowse link
G DSP desmoplakin involved_in ISO (PMID:12373648) BHF-UCL PMID:12373648 NCBI chr35:7,479,628...7,524,732
Ensembl chr35:7,479,643...7,524,044
JBrowse link
G JUP junction plakoglobin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:21,028,773...21,053,071
Ensembl chr 9:21,028,828...21,053,071
JBrowse link
G PKP2 plakophilin 2 involved_in ISO (PMID:22889254) BHF-UCL PMID:22889254 NCBI chr27:16,023,186...16,109,978
Ensembl chr27:16,023,224...16,109,603
JBrowse link
G RYR2 ryanodine receptor 2 involved_in ISO (PMID:17875969) BHF-UCL PMID:17875969 NCBI chr 4:2,371,868...2,908,132
Ensembl chr 4:2,373,114...2,907,875
JBrowse link
G TRPM4 transient receptor potential cation channel subfamily M member 4 involved_in ISO (PMID:27207958) BHF-UCL PMID:27207958 NCBI chr 1:107,261,760...107,304,157
Ensembl chr 1:107,261,756...107,303,346
JBrowse link
ventricular cardiac muscle cell action potential term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANK2 ankyrin 2 involved_in ISO (PMID:17242276) BHF-UCL PMID:17242276 NCBI chr32:32,484,196...33,143,295
Ensembl chr32:32,671,281...33,141,036
JBrowse link
G CAV3 caveolin 3 involved_in ISO PMID:22879586 BHF-UCL PMID:22879586 RGD:8553349 NCBI chr20:9,384,901...9,398,055
Ensembl chr20:9,384,901...9,401,196
JBrowse link
G GJA5 gap junction protein alpha 5 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:1197846|PMID:9501070) Ensembl
MGI
PMID:9501070 GO_REF:0000107 MGI:1197846 NCBI chr17:58,289,327...58,305,315
Ensembl chr17:58,289,327...58,305,315
JBrowse link
G GPD1L glycerol-3-phosphate dehydrogenase 1 like involved_in ISO (PMID:17967977), (PMID:19666841) BHF-UCL PMID:17967977 PMID:19666841 NCBI chr23:12,568,914...12,631,903
Ensembl chr23:12,522,398...12,632,447
JBrowse link
G KCNE1 potassium voltage-gated channel subfamily E regulatory subunit 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr31:29,858,428...29,868,315 JBrowse link
G KCNE2 potassium voltage-gated channel subfamily E regulatory subunit 2 involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:21873635)
(MGI:3813163|PMID:18603586)
GO_Central
MGI
PMID:18603586 PMID:21873635 MGI:3813163 NCBI chr31:29,777,154...29,777,839
Ensembl chr31:29,581,658...29,777,525
JBrowse link
G KCNE3 potassium voltage-gated channel subfamily E regulatory subunit 3 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr21:23,860,727...23,872,194
Ensembl chr21:23,871,648...23,871,947
JBrowse link
G KCNE5 potassium voltage-gated channel subfamily E regulatory subunit 5 involved_in ISO (PMID:21493962) BHF-UCL PMID:21493962 NCBI chr  X:82,844,188...82,845,641
Ensembl chr  X:82,845,064...82,846,083
JBrowse link
G KCNH2 potassium voltage-gated channel subfamily H member 2 involved_in ISO (PMID:21536673) BHF-UCL PMID:21536673 NCBI chr16:15,009,031...15,041,786
Ensembl chr16:15,009,031...15,041,504
JBrowse link
G KCNQ1 potassium voltage-gated channel subfamily Q member 1 involved_in ISO (PMID:8528244) BHF-UCL PMID:8528244 NCBI chr18:46,554,390...46,830,533
Ensembl chr18:46,518,908...46,830,043
JBrowse link
G NEDD4L NEDD4 like E3 ubiquitin protein ligase involved_in ISO PMID:22879586 BHF-UCL PMID:22879586 RGD:8553349 NCBI chr 1:17,629,163...17,858,471
Ensembl chr 1:17,633,591...17,950,072
JBrowse link
G PKP2 plakophilin 2 involved_in ISO (PMID:22889254) BHF-UCL PMID:22889254 NCBI chr27:16,023,186...16,109,978
Ensembl chr27:16,023,224...16,109,603
JBrowse link
G RYR2 ryanodine receptor 2 involved_in ISO (MGI:3820489|PMID:17872467) BHF-UCL PMID:17872467 MGI:3820489 NCBI chr 4:2,371,868...2,908,132
Ensembl chr 4:2,373,114...2,907,875
JBrowse link
G SCN3B sodium voltage-gated channel beta subunit 3 involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:21873635)
(MGI:5294649|PMID:19351516)
GO_Central
MGI
PMID:19351516 PMID:21873635 MGI:5294649 NCBI chr 5:10,783,235...10,808,342
Ensembl chr 5:10,783,325...10,804,242
JBrowse link
G SCN5A sodium voltage-gated channel alpha subunit 5 involved_in ISO (PMID:22529811) BHF-UCL PMID:22529811 NCBI chr23:8,278,844...8,374,614
Ensembl chr23:8,280,793...8,358,560
JBrowse link
G SNTA1 syntrophin alpha 1 involved_in ISO (PMID:18591664) BHF-UCL PMID:18591664 NCBI chr24:22,636,716...22,665,828
Ensembl chr24:22,636,756...22,665,741
JBrowse link
vesicle transport along actin filament term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACTN4 actinin alpha 4 involved_in ISO (PMID:25918384) UniProt PMID:25918384 NCBI chr 1:114,354,993...114,427,997
Ensembl chr 1:114,309,693...114,427,991
JBrowse link
G FNBP1L formin binding protein 1 like involved_in ISO (PMID:20730103) BHF-UCL PMID:20730103 NCBI chr 6:55,533,270...55,642,622
Ensembl chr 6:55,534,751...55,642,463
JBrowse link
G MYO1C myosin IC involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:21873635)
(MGI:2447241|PMID:12490950)
GO_Central
MGI
PMID:12490950 PMID:21873635 MGI:2447241 NCBI chr 9:45,635,295...45,658,226
Ensembl chr 9:45,636,208...45,658,035
JBrowse link
G MYO1D myosin ID involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 9:40,171,426...40,497,556
Ensembl chr 9:40,171,158...40,496,210
JBrowse link
G MYO1E myosin IE involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr30:24,067,622...24,265,567
Ensembl chr30:24,068,283...24,265,311
JBrowse link
G MYO5A myosin VA involved_in ISO (PMID:24006491) RGD
UniProt
PMID:11470781 PMID:16190983 PMID:24006491 RGD:1600832 RGD:2306437 NCBI chr30:17,990,521...18,122,160
Ensembl chr30:17,888,419...18,213,061
JBrowse link
G WASL WASP like actin nucleation promoting factor involved_in ISO PMID:20730103 BHF-UCL PMID:20730103 RGD:8554834 NCBI chr14:11,828,298...11,901,190
Ensembl chr14:11,828,687...11,899,788
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 13863
    cellular process 13104
      actin filament-based process 704
        actin filament-based movement 113
          actin-mediated cell contraction + 92
          mitochondrion migration along actin filament 1
          nuclear migration along microfilament 2
          positive regulation of actin filament-based movement + 4
          regulation of actin filament-based movement + 45
          vesicle transport along actin filament + 7
paths to the root