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ONTOLOGY REPORT - ANNOTATIONS


Term:actin filament-based movement
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Accession:GO:0030048 term browser browse the term
Definition:Movement of organelles or other particles along actin filaments, or sliding of actin filaments past each other, mediated by motor proteins.


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actin filament-based movement term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actc1 actin alpha cardiac muscle 1 involved_in ISO (PMID:16611632) UniProt PMID:16611632 NCBI chrNW_004955416:2,139,541...2,144,678
Ensembl chrNW_004955416:2,137,101...2,145,416
JBrowse link
G Myh10 myosin heavy chain 10 acts_upstream_of_or_within ISO (PMID:15845534) MGI PMID:15845534 NCBI chrNW_004955467:8,298,514...8,427,459
Ensembl chrNW_004955467:8,298,527...8,427,459
JBrowse link
G Myh14 myosin heavy chain 14 acts_upstream_of_or_within ISO (MGI:3043535|PMID:14594953), (MGI:3587548|PMID:15845534) MGI PMID:14594953 PMID:15845534 MGI:3043535 MGI:3587548 NCBI chrNW_004955559:796,455...856,082
Ensembl chrNW_004955559:797,107...853,053
JBrowse link
G Myh9 myosin heavy chain 9 involved_in
acts_upstream_of_or_within
ISO (PMID:12237319)
(PMID:15845534)
UniProt
MGI
PMID:12237319 PMID:15845534 NCBI chrNW_004955413:22,881,759...22,972,182
Ensembl chrNW_004955413:22,881,045...22,972,450
JBrowse link
G Myo1b myosin IB involved_in ISO PMID:20080738
PMID:17298083
UniProt PMID:17298083 PMID:20080738 RGD:8554192 RGD:8554448 NCBI chrNW_004955403:7,826,058...7,966,457
Ensembl chrNW_004955403:7,826,058...7,966,624
JBrowse link
G Myo5a myosin VA acts_upstream_of_or_within ISO (MGI:3039317|PMID:15007063) RGD
MGI
PMID:15007063 PMID:16030255 MGI:3039317 RGD:1581734 NCBI chrNW_004955409:2,409,503...2,530,539
Ensembl chrNW_004955409:2,428,815...2,530,012
JBrowse link
G Myo6 myosin VI involved_in ISO (PMID:10519557) UniProt PMID:10519557 NCBI chrNW_004955502:4,219,067...4,356,988
Ensembl chrNW_004955502:4,218,885...4,356,988
JBrowse link
G Myo7a myosin VIIA involved_in ISO (PMID:21687988) RGD
UniProt
PMID:12466270 PMID:21687988 RGD:633398 NCBI chrNW_004955414:14,576,356...14,647,500
Ensembl chrNW_004955414:14,576,356...14,647,500
JBrowse link
G Myo9b myosin IXB involved_in ISO (PMID:11901422), (PMID:16338935), (PMID:9490638) UniProt PMID:9490638 PMID:11901422 PMID:16338935 NCBI chrNW_004955524:973,576...1,024,351
Ensembl chrNW_004955524:974,844...1,024,311
JBrowse link
G Was WASP actin nucleation promoting factor acts_upstream_of_or_within ISO (MGI:2387810|PMID:12147689) MGI PMID:12147689 MGI:2387810 NCBI chrNW_004955543:243,618...253,489
Ensembl chrNW_004955543:247,631...253,274
JBrowse link
G Wasf2 WASP family member 2 acts_upstream_of_or_within ISO (MGI:2668778|PMID:12853475) MGI PMID:12853475 MGI:2668778 NCBI chrNW_004955452:6,658,854...6,733,964
Ensembl chrNW_004955452:6,658,854...6,680,084
JBrowse link
G Wipf1 WAS/WASL interacting protein family member 1 acts_upstream_of_or_within ISO (MGI:2387810|PMID:12147689) MGI PMID:12147689 MGI:2387810 NCBI chrNW_004955449:760,382...831,007 JBrowse link
actin-mediated cell contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actc1 actin alpha cardiac muscle 1 acts_upstream_of_or_within ISO (MGI:5468414|PMID:22750946) MGI PMID:22750946 MGI:5468414 NCBI chrNW_004955416:2,139,541...2,144,678
Ensembl chrNW_004955416:2,137,101...2,145,416
JBrowse link
G Emp2 epithelial membrane protein 2 involved_in ISO (PMID:18469192), (PMID:22728127) UniProt PMID:18469192 PMID:22728127 NCBI chrNW_004955442:7,826,967...7,862,035
Ensembl chrNW_004955442:7,826,738...7,860,028
JBrowse link
G Myh2 myosin heavy chain 2 acts_upstream_of_or_within ISO (MGI:5468414|PMID:22750946) MGI PMID:22750946 MGI:5468414 NCBI chrNW_004955467:6,655,346...6,681,354 JBrowse link
G Parva parvin alpha involved_in ISO (MGI:4368016|PMID:19798050) UniProt PMID:19798050 MGI:4368016 NCBI chrNW_004955414:27,813,745...27,960,743
Ensembl chrNW_004955414:27,813,745...27,960,743
JBrowse link
G Pdpn podoplanin involved_in ISO (MGI:5614157|PMID:25341788) UniProt PMID:25341788 MGI:5614157 NCBI chrNW_004955527:4,183,639...4,215,200 JBrowse link
actin-myosin filament sliding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actc1 actin alpha cardiac muscle 1 involved_in ISO (PMID:19799913) BHF-UCL PMID:19799913 NCBI chrNW_004955416:2,139,541...2,144,678
Ensembl chrNW_004955416:2,137,101...2,145,416
JBrowse link
apical constriction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccdc88c coiled-coil domain containing 88C involved_in ISO (PMID:30948426) UniProt PMID:30948426 NCBI chrNW_004955438:13,585,469...13,708,170 JBrowse link
G Epb41l5 erythrocyte membrane protein band 4.1 like 5 acts_upstream_of_or_within ISO (MGI:4438998|PMID:20103536) MGI PMID:20103536 MGI:4438998 NCBI chrNW_004955459:9,641,926...9,783,718
Ensembl chrNW_004955459:9,641,884...9,784,173
JBrowse link
G Frmd6 FERM domain containing 6 acts_upstream_of_or_within ISO (MGI:5086051|PMID:21685893) MGI PMID:21685893 MGI:5086051 NCBI chrNW_004955409:11,262,456...11,420,892
Ensembl chrNW_004955409:11,262,204...11,302,146
JBrowse link
G Pard3 par-3 family cell polarity regulator acts_upstream_of_or_within ISO (MGI:5086051|PMID:21685893) MGI PMID:21685893 MGI:5086051 NCBI chrNW_004955462:2,930,171...3,457,358
Ensembl chrNW_004955462:2,849,181...3,457,478
JBrowse link
G Rock1 Rho associated coiled-coil containing protein kinase 1 acts_upstream_of_or_within ISO (MGI:5086051|PMID:21685893) MGI PMID:21685893 MGI:5086051 NCBI chrNW_004955402:9,752,101...9,864,317
Ensembl chrNW_004955402:9,750,730...9,864,317
JBrowse link
atrial cardiac muscle cell action potential term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ank2 ankyrin 2 involved_in ISO (PMID:17242276), (PMID:18832177), (PMID:21859974)
(MGI:5427070|PMID:21859974)
BHF-UCL PMID:17242276 PMID:18832177 PMID:21859974 MGI:5427070 NCBI chrNW_004955457:13,624,590...13,938,427
Ensembl chrNW_004955457:13,624,413...14,076,261
JBrowse link
G Kcna5 potassium voltage-gated channel subfamily A member 5 involved_in ISO (PMID:19343045), (PMID:23264583) BHF-UCL PMID:19343045 PMID:23264583 NCBI chrNW_004955413:2,835,730...2,838,761
Ensembl chrNW_004955413:2,836,146...2,837,966
JBrowse link
G Kcne5 potassium voltage-gated channel subfamily E regulatory subunit 5 involved_in ISO (PMID:18313602) BHF-UCL PMID:18313602 NCBI chrNW_004955490:6,242,197...6,243,627 JBrowse link
G Kcnq1 potassium voltage-gated channel subfamily Q member 1 involved_in ISO (PMID:12522251) BHF-UCL PMID:12522251 NCBI chrNW_004955422:14,212,563...14,544,556
Ensembl chrNW_004955422:14,212,553...14,544,556
JBrowse link
G Nup155 nucleoporin 155 acts_upstream_of_or_within ISO (MGI:3839697|PMID:19070573) MGI PMID:19070573 MGI:3839697 NCBI chrNW_004955426:21,997,208...22,057,205
Ensembl chrNW_004955426:21,997,208...22,057,205
JBrowse link
G Scn3b sodium voltage-gated channel beta subunit 3 involved_in ISO (PMID:21051419) BHF-UCL PMID:21051419 NCBI chrNW_004955412:24,391,764...24,412,912
Ensembl chrNW_004955412:24,388,366...24,412,604
JBrowse link
G Scn5a sodium voltage-gated channel alpha subunit 5 involved_in ISO (PMID:18065446) BHF-UCL PMID:18065446 NCBI chrNW_004955427:25,295,517...25,371,419
Ensembl chrNW_004955427:25,295,514...25,371,552
JBrowse link
cardiac muscle cell action potential involved in contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cacna1c calcium voltage-gated channel subunit alpha1 C involved_in ISO (PMID:15454078) BHF-UCL PMID:15454078 NCBI chrNW_004955454:4,573,647...5,199,046
Ensembl chrNW_004955454:4,490,923...5,198,506
JBrowse link
G Cacna1d calcium voltage-gated channel subunit alpha1 D involved_in ISO (PMID:21131953) BHF-UCL PMID:21131953 NCBI chrNW_004955430:3,450,151...3,796,983
Ensembl chrNW_004955430:3,268,953...3,794,592
JBrowse link
G Cacna1g calcium voltage-gated channel subunit alpha1 G involved_in ISO (MGI:3714901|PMID:16690884) BHF-UCL PMID:16690884 MGI:3714901 NCBI chrNW_004955451:11,136,885...11,194,321
Ensembl chrNW_004955451:11,137,214...11,194,036
JBrowse link
G Cacna2d1 calcium voltage-gated channel auxiliary subunit alpha2delta 1 involved_in ISO (PMID:25527503) BHF-UCL PMID:25527503 NCBI chrNW_004955410:3,544,398...3,963,582
Ensembl chrNW_004955410:3,619,740...3,964,239
JBrowse link
G Kcnd3 potassium voltage-gated channel subfamily D member 3 acts_upstream_of_or_within ISO (MGI:6402838|PMID:32109384) MGI PMID:32109384 MGI:6402838 NCBI chrNW_004955435:15,227,386...15,431,136
Ensembl chrNW_004955435:15,227,615...15,431,190
JBrowse link
G Kcne1 potassium voltage-gated channel subfamily E regulatory subunit 1 involved_in ISO (PMID:10400998) BHF-UCL PMID:10400998 NCBI chrNW_004955407:33,807,581...33,814,356 JBrowse link
G Kcne2 potassium voltage-gated channel subfamily E regulatory subunit 2 involved_in ISO (PMID:10219239) BHF-UCL PMID:10219239 NCBI chrNW_004955407:33,734,969...33,736,609
Ensembl chrNW_004955407:33,735,148...33,735,513
JBrowse link
G Kcnj2 potassium inwardly rectifying channel subfamily J member 2 involved_in ISO (PMID:11371347) BHF-UCL PMID:11371347 NCBI chrNW_004955478:2,734,795...2,745,217
Ensembl chrNW_004955478:2,734,795...2,745,217
JBrowse link
G Pkp2 plakophilin 2 involved_in ISO (PMID:22889254) BHF-UCL PMID:22889254 NCBI chrNW_004955505:2,878,001...2,959,299
Ensembl chrNW_004955505:2,878,081...2,958,404
JBrowse link
G Scn1a sodium voltage-gated channel alpha subunit 1 involved_in ISO (PMID:27207958) BHF-UCL PMID:27207958 NCBI chrNW_004955449:8,072,910...8,220,763
Ensembl chrNW_004955449:8,160,986...8,221,951
JBrowse link
G Scn1b sodium voltage-gated channel beta subunit 1 involved_in ISO (PMID:19808477) BHF-UCL PMID:19808477 NCBI chrNW_004955468:4,375,517...4,383,383
Ensembl chrNW_004955468:4,375,157...4,383,502
JBrowse link
G Scn2b sodium voltage-gated channel beta subunit 2 involved_in ISO (PMID:19808477) BHF-UCL PMID:19808477 NCBI chrNW_004955412:19,341,008...19,353,563
Ensembl chrNW_004955412:19,340,947...19,354,062
JBrowse link
G Scn3b sodium voltage-gated channel beta subunit 3 involved_in ISO (PMID:21051419) BHF-UCL PMID:21051419 NCBI chrNW_004955412:24,391,764...24,412,912
Ensembl chrNW_004955412:24,388,366...24,412,604
JBrowse link
G Scn4b sodium voltage-gated channel beta subunit 4 involved_in ISO (PMID:17592081) BHF-UCL PMID:17592081 NCBI chrNW_004955412:19,312,697...19,330,913
Ensembl chrNW_004955412:19,311,797...19,331,201
JBrowse link
G Scn5a sodium voltage-gated channel alpha subunit 5 involved_in
acts_upstream_of_or_within
ISO (PMID:21895525)
(MGI:6402838|PMID:32109384)
BHF-UCL
MGI
PMID:21895525 PMID:32109384 MGI:6402838 NCBI chrNW_004955427:25,295,517...25,371,419
Ensembl chrNW_004955427:25,295,514...25,371,552
JBrowse link
cardiac muscle cell contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Camk2d calcium/calmodulin dependent protein kinase II delta involved_in ISO PMID:12676814 BHF-UCL PMID:12676814 RGD:8656014 NCBI chrNW_004955428:25,583,501...25,880,395 JBrowse link
G Gsn gelsolin involved_in ISO (MGI:6450443|PMID:30568254) BHF-UCL PMID:30568254 MGI:6450443 NCBI chrNW_004955419:6,682,202...6,733,361
Ensembl chrNW_004955419:6,682,058...6,733,361
JBrowse link
G Pik3ca phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha involved_in ISO (MGI:6450443|PMID:30568254) BHF-UCL PMID:30568254 MGI:6450443 NCBI chrNW_004955420:8,355,415...8,427,024
Ensembl chrNW_004955420:8,356,353...8,427,024
JBrowse link
G Sgcd sarcoglycan delta acts_upstream_of_or_within ISO (MGI:1343715|PMID:10481911) MGI PMID:10481911 MGI:1343715 NCBI chrNW_004955408:10,273,344...10,820,108
Ensembl chrNW_004955408:10,273,223...10,819,072
JBrowse link
G Slc9a1 solute carrier family 9 member A1 ISO RGD PMID:20868366 RGD:7349316 NCBI chrNW_004955452:6,409,833...6,467,841
Ensembl chrNW_004955452:6,409,833...6,467,841
JBrowse link
cytoplasmic actin-based contraction involved in cell motility term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Limch1 LIM and calponin homology domains 1 involved_in ISO (PMID:28228547) CACAO PMID:28228547 NCBI chrNW_004955443:5,984,027...6,305,014
Ensembl chrNW_004955443:5,983,842...6,305,014
JBrowse link
G Shtn1 shootin 1 involved_in ISO PMID:23453953 UniProt PMID:23453953 RGD:10054078 NCBI chrNW_004955431:21,653,415...21,734,160
Ensembl chrNW_004955431:21,653,415...21,734,426
JBrowse link
G Vil1 villin 1 involved_in ISO (PMID:15342783) UniProt PMID:15342783 NCBI chrNW_004955453:14,935,450...14,961,011
Ensembl chrNW_004955453:14,935,456...14,961,011
JBrowse link
membrane depolarization during atrial cardiac muscle cell action potential term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cacna1c calcium voltage-gated channel subunit alpha1 C involved_in ISO (PMID:17224476) BHF-UCL PMID:17224476 NCBI chrNW_004955454:4,573,647...5,199,046
Ensembl chrNW_004955454:4,490,923...5,198,506
JBrowse link
G Cacnb2 calcium voltage-gated channel auxiliary subunit beta 2 involved_in ISO (PMID:17224476) BHF-UCL PMID:17224476 NCBI chrNW_004955429:9,642,725...9,966,175
Ensembl chrNW_004955429:9,644,053...9,966,175
JBrowse link
G Scn5a sodium voltage-gated channel alpha subunit 5 involved_in ISO (PMID:18065446) BHF-UCL PMID:18065446 NCBI chrNW_004955427:25,295,517...25,371,419
Ensembl chrNW_004955427:25,295,514...25,371,552
JBrowse link
membrane repolarization during atrial cardiac muscle cell action potential term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kcna5 potassium voltage-gated channel subfamily A member 5 involved_in ISO (PMID:19343045), (PMID:23264583) BHF-UCL PMID:19343045 PMID:23264583 NCBI chrNW_004955413:2,835,730...2,838,761
Ensembl chrNW_004955413:2,836,146...2,837,966
JBrowse link
G Kcnj5 potassium inwardly rectifying channel subfamily J member 5 involved_in ISO (PMID:20560207) BHF-UCL PMID:20560207 NCBI chrNW_004955412:29,850,097...29,874,213
Ensembl chrNW_004955412:29,850,097...29,874,213
JBrowse link
G Kcnn2 potassium calcium-activated channel subfamily N member 2 involved_in ISO (MGI:5292192|PMID:19139040) BHF-UCL PMID:19139040 MGI:5292192 NCBI chrNW_004955408:34,223,523...34,366,191
Ensembl chrNW_004955408:34,109,334...34,368,114
JBrowse link
G Kcnq1 potassium voltage-gated channel subfamily Q member 1 involved_in ISO (PMID:12522251), (PMID:25786344) BHF-UCL PMID:12522251 PMID:25786344 NCBI chrNW_004955422:14,212,563...14,544,556
Ensembl chrNW_004955422:14,212,553...14,544,556
JBrowse link
membrane repolarization during ventricular cardiac muscle cell action potential term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kcne1 potassium voltage-gated channel subfamily E regulatory subunit 1 involved_in ISO (PMID:9354802) BHF-UCL PMID:9354802 NCBI chrNW_004955407:33,807,581...33,814,356 JBrowse link
G Kcne2 potassium voltage-gated channel subfamily E regulatory subunit 2 involved_in ISO (PMID:10219239) BHF-UCL PMID:10219239 NCBI chrNW_004955407:33,734,969...33,736,609
Ensembl chrNW_004955407:33,735,148...33,735,513
JBrowse link
G Kcnh2 potassium voltage-gated channel subfamily H member 2 involved_in ISO (PMID:21536673) BHF-UCL PMID:21536673 NCBI chrNW_004955491:5,391,444...5,422,241
Ensembl chrNW_004955491:5,391,384...5,422,241
JBrowse link
G Kcnj8 potassium inwardly rectifying channel subfamily J member 8 involved_in ISO (PMID:20558321) BHF-UCL PMID:20558321 NCBI chrNW_004955413:17,364,447...17,371,255
Ensembl chrNW_004955413:17,364,213...17,371,255
JBrowse link
G Kcnq1 potassium voltage-gated channel subfamily Q member 1 involved_in ISO (PMID:8528244) BHF-UCL PMID:8528244 NCBI chrNW_004955422:14,212,563...14,544,556
Ensembl chrNW_004955422:14,212,553...14,544,556
JBrowse link
mitochondrion migration along actin filament term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Myo19 myosin XIX acts_upstream_of_or_within ISO (PMID:19932026) MGI PMID:19932026 NCBI chrNW_004955451:1,391,793...1,436,514
Ensembl chrNW_004955451:1,392,645...1,436,514
JBrowse link
muscle filament sliding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tnnt2 troponin T2, cardiac type involved_in ISO (PMID:12186860), (PMID:15923195) UniProt PMID:12186860 PMID:15923195 NCBI chrNW_004955406:37,491,462...37,507,360
Ensembl chrNW_004955406:37,487,154...37,507,639
JBrowse link
G Tpm1 tropomyosin 1 involved_in ISO PMID:11136687 BHF-UCL PMID:11136687 RGD:1556479 NCBI chrNW_004955450:12,197,241...12,223,372
Ensembl chrNW_004955450:12,194,755...12,224,011
JBrowse link
myofibroblast contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Epdr1 ependymin related 1 involved_in ISO (PMID:27245865) UniProt PMID:27245865 NCBI chrNW_004955460:5,612,589...5,650,222
Ensembl chrNW_004955460:5,612,270...5,650,661
JBrowse link
negative regulation of hepatic stellate cell contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nos1 nitric oxide synthase 1 ISO RGD PMID:10727442 RGD:13824993 NCBI chrNW_004955455:13,797,557...13,978,402
Ensembl chrNW_004955455:13,797,545...13,972,566
JBrowse link
negative regulation of membrane repolarization during ventricular cardiac muscle cell action potential term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kcne3 potassium voltage-gated channel subfamily E regulatory subunit 3 involved_in ISO (PMID:22987075) BHF-UCL PMID:22987075 NCBI chrNW_004955414:17,166,537...17,200,385
Ensembl chrNW_004955414:17,166,546...17,200,353
JBrowse link
negative regulation of muscle filament sliding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dbn1 drebrin 1 ISO RGD PMID:17543276 RGD:10398727 NCBI chrNW_004955408:29,695,442...29,705,417
Ensembl chrNW_004955408:29,696,266...29,705,416
JBrowse link
negative regulation of ventricular cardiac muscle cell action potential term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bin1 bridging integrator 1 involved_in ISO (MGI:5583915|PMID:24836577) ARUK-UCL PMID:24836577 MGI:5583915 NCBI chrNW_004955459:3,376,149...3,423,157
Ensembl chrNW_004955459:3,399,611...3,422,621
JBrowse link
nuclear migration along microfilament term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sun2 Sad1 and UNC84 domain containing 2 involved_in ISO (MGI:4888085|PMID:20724637) UniProt PMID:20724637 MGI:4888085 NCBI chrNW_004955413:24,851,626...24,868,352
Ensembl chrNW_004955413:24,851,626...24,865,575
JBrowse link
G Syne2 spectrin repeat containing nuclear envelope protein 2 involved_in ISO (MGI:4888085|PMID:20724637) UniProt PMID:20724637 MGI:4888085 NCBI chrNW_004955466:5,646,516...5,926,382 JBrowse link
positive regulation of atrial cardiac muscle cell action potential term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Trpm4 transient receptor potential cation channel subfamily M member 4 ISO RGD PMID:23954346 RGD:10003031 NCBI chrNW_004955559:1,539,036...1,581,800
Ensembl chrNW_004955559:1,546,365...1,581,712
JBrowse link
positive regulation of cardiac muscle cell contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cacna1h calcium voltage-gated channel subunit alpha1 H ISO RGD PMID:19443576 RGD:7205486 NCBI chrNW_004955442:16,047,965...16,108,862
Ensembl chrNW_004955442:16,045,895...16,108,862
JBrowse link
positive regulation of hepatic stellate cell contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acta2 actin alpha 2, smooth muscle ISO RGD PMID:24204762 RGD:12879446 NCBI chrNW_004955425:4,023,001...4,039,980
Ensembl chrNW_004955425:4,026,430...4,040,747
JBrowse link
positive regulation of myofibroblast contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ptger3 prostaglandin E receptor 3 ISO RGD PMID:19239477 RGD:10045899 NCBI chrNW_004955423:21,096,926...21,164,435 JBrowse link
regulation of atrial cardiac muscle cell action potential term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ank2 ankyrin 2 involved_in ISO (PMID:12571597)
(MGI:2449848|PMID:12571597)
BHF-UCL PMID:12571597 MGI:2449848 NCBI chrNW_004955457:13,624,590...13,938,427
Ensembl chrNW_004955457:13,624,413...14,076,261
JBrowse link
G Gja5 gap junction protein alpha 5 involved_in ISO (PMID:23348765) BHF-UCL PMID:23348765 NCBI chrNW_004955568:635,319...652,692
Ensembl chrNW_004955568:635,042...653,349
JBrowse link
G Ryr2 ryanodine receptor 2 involved_in ISO (PMID:17875969) BHF-UCL PMID:17875969 NCBI chrNW_004955492:2,647,597...3,275,512
Ensembl chrNW_004955492:2,648,956...3,076,509
JBrowse link
regulation of cardiac muscle cell action potential involved in regulation of contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akap9 A-kinase anchoring protein 9 involved_in ISO (PMID:18093912) BHF-UCL PMID:18093912 NCBI chrNW_004955432:8,933,037...9,090,872
Ensembl chrNW_004955432:8,932,952...9,095,065
JBrowse link
G Atp2a2 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2 involved_in ISO PMID:9851937 BHF-UCL PMID:9851937 RGD:10047146 NCBI chrNW_004955482:7,233,336...7,295,754
Ensembl chrNW_004955482:7,233,336...7,295,754
JBrowse link
G Cav3 caveolin 3 involved_in ISO (PMID:17060380) BHF-UCL PMID:17060380 NCBI chrNW_004955561:326,008...335,911
Ensembl chrNW_004955561:325,944...335,914
JBrowse link
G Fgf13 fibroblast growth factor 13 involved_in ISO (MGI:5437408|PMID:21817159) BHF-UCL PMID:21817159 MGI:5437408 NCBI chrNW_004955489:6,122,707...6,621,624
Ensembl chrNW_004955489:6,123,633...6,621,692
JBrowse link
G Hcn4 hyperpolarization activated cyclic nucleotide gated potassium channel 4 involved_in ISO (PMID:16407510) BHF-UCL PMID:16407510 NCBI chrNW_004955450:4,139,852...4,181,377
Ensembl chrNW_004955450:4,139,852...4,181,377
JBrowse link
G Rangrf RAN guanine nucleotide release factor involved_in ISO (PMID:21621375) BHF-UCL PMID:21621375 NCBI chrNW_004955467:8,622,843...8,624,401
Ensembl chrNW_004955467:8,622,843...8,624,401
JBrowse link
regulation of cardiac muscle cell contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adora1 adenosine A1 receptor ISO RGD PMID:19525381 RGD:2317914 NCBI chrNW_004955406:39,148,811...39,183,577
Ensembl chrNW_004955406:39,149,689...39,187,688
JBrowse link
G Adrb1 adrenoceptor beta 1 ISO RGD PMID:19525381 PMID:22216755 RGD:2317914 RGD:6893639 NCBI chrNW_004955431:19,025,663...19,027,026 JBrowse link
G Akap6 A-kinase anchoring protein 6 involved_in ISO PMID:11179196 BHF-UCL PMID:11179196 RGD:8553373 NCBI chrNW_004955409:28,067,814...28,516,881
Ensembl chrNW_004955409:28,077,621...28,516,944
JBrowse link
G Ank2 ankyrin 2 involved_in ISO (PMID:17242276)
(MGI:3771114|PMID:17242276)
BHF-UCL PMID:17242276 MGI:3771114 NCBI chrNW_004955457:13,624,590...13,938,427
Ensembl chrNW_004955457:13,624,413...14,076,261
JBrowse link
G Atp1a1 ATPase Na+/K+ transporting subunit alpha 1 ISO RGD PMID:15629895 RGD:6903236 NCBI chrNW_004955435:19,537,224...19,563,631
Ensembl chrNW_004955435:19,536,634...19,564,580
JBrowse link
G Atp1a2 ATPase Na+/K+ transporting subunit alpha 2 ISO RGD PMID:17442282 RGD:6903343 NCBI chrNW_004955468:11,898,786...11,924,341
Ensembl chrNW_004955468:11,898,915...11,922,400
JBrowse link
G Casq2 calsequestrin 2 involved_in ISO PMID:17569730 BHF-UCL PMID:17569730 RGD:2314601 NCBI chrNW_004955435:18,941,975...18,996,027
Ensembl chrNW_004955435:18,941,936...18,996,200
JBrowse link
G Fxyd1 FXYD domain containing ion transport regulator 1 ISO RGD PMID:14684371 RGD:9685468 NCBI chrNW_004955468:4,456,909...4,460,895
Ensembl chrNW_004955468:4,457,985...4,460,528
JBrowse link
G Gata4 GATA binding protein 4 ISO RGD PMID:21702924 RGD:7207043 NCBI chrNW_004955403:52,958,318...53,029,267
Ensembl chrNW_004955403:52,987,644...53,029,267
JBrowse link
G Kcnj2 potassium inwardly rectifying channel subfamily J member 2 ISO RGD PMID:22426100 RGD:7247430 NCBI chrNW_004955478:2,734,795...2,745,217
Ensembl chrNW_004955478:2,734,795...2,745,217
JBrowse link
G Pde4b phosphodiesterase 4B involved_in ISO (MGI:5286798|PMID:21670503) BHF-UCL PMID:21670503 MGI:5286798 NCBI chrNW_004955423:24,464,503...24,906,409
Ensembl chrNW_004955423:24,463,953...24,906,394
JBrowse link
G Pde4d phosphodiesterase 4D involved_in ISO (MGI:5286798|PMID:21670503), (MGI:5442270|PMID:21903937)
PMID:19801680
RGD
BHF-UCL
PMID:19801680 PMID:21670503 PMID:21903937 MGI:5286798 MGI:5442270 RGD:7327160 NCBI chrNW_004955446:7,914,326...9,252,527
Ensembl chrNW_004955446:8,211,877...9,252,653
JBrowse link
G Pln phospholamban acts_upstream_of_or_within ISO (MGI:3655311|PMID:8620604) MGI PMID:8620604 MGI:3655311 NCBI chrNW_004955436:1,439,098...1,447,070
Ensembl chrNW_004955436:1,439,098...1,447,070
JBrowse link
G Scn5a sodium voltage-gated channel alpha subunit 5 involved_in
acts_upstream_of_or_within
ISO (PMID:22529811)
(MGI:3695100|PMID:16172272)
BHF-UCL
MGI
PMID:16172272 PMID:22529811 MGI:3695100 NCBI chrNW_004955427:25,295,517...25,371,419
Ensembl chrNW_004955427:25,295,514...25,371,552
JBrowse link
G Sri sorcin involved_in ISO (PMID:12754254), (PMID:17130302) BHF-UCL PMID:12754254 PMID:17130302 NCBI chrNW_004955432:5,541,311...5,559,781
Ensembl chrNW_004955432:5,541,311...5,560,294
JBrowse link
G Stc1 stanniocalcin 1 involved_in ISO (PMID:12663264) UniProt PMID:12663264 NCBI chrNW_004955403:46,969,837...46,982,075
Ensembl chrNW_004955403:46,969,677...46,982,191
JBrowse link
G Sumo1 small ubiquitin like modifier 1 involved_in ISO (MGI:5292424|PMID:21900893) BHF-UCL PMID:21900893 MGI:5292424 NCBI chrNW_004955457:12,538,974...12,565,803
Ensembl chrNW_004955457:12,538,480...12,565,803
JBrowse link
regulation of muscle filament sliding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mylk2 myosin light chain kinase 2 involved_in ISO (PMID:16448786) BHF-UCL PMID:16448786 NCBI chrNW_004955422:29,141,699...29,154,927
Ensembl chrNW_004955422:29,141,348...29,154,927
JBrowse link
regulation of muscle filament sliding speed term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tnnc1 troponin C1, slow skeletal and cardiac type involved_in ISO (MGI:3793933|PMID:10747195) BHF-UCL PMID:10747195 MGI:3793933 NCBI chrNW_004955430:2,438,644...2,441,596
Ensembl chrNW_004955430:2,434,874...2,441,596
JBrowse link
G Tnnt2 troponin T2, cardiac type involved_in ISO PMID:10747195 BHF-UCL PMID:10747195 RGD:8554013 NCBI chrNW_004955406:37,491,462...37,507,360
Ensembl chrNW_004955406:37,487,154...37,507,639
JBrowse link
regulation of myofibroblast contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pdpn podoplanin involved_in ISO (MGI:5644359|PMID:25347465) UniProt PMID:25347465 MGI:5644359 NCBI chrNW_004955527:4,183,639...4,215,200 JBrowse link
regulation of ventricular cardiac muscle cell action potential term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cacna1c calcium voltage-gated channel subunit alpha1 C involved_in ISO (PMID:15454078), (PMID:26253506) BHF-UCL PMID:15454078 PMID:26253506 NCBI chrNW_004955454:4,573,647...5,199,046
Ensembl chrNW_004955454:4,490,923...5,198,506
JBrowse link
G Cav1 caveolin 1 involved_in ISO (MGI:5607357|PMID:25017399) BHF-UCL PMID:25017399 MGI:5607357 NCBI chrNW_004955432:22,258,262...22,292,403
Ensembl chrNW_004955432:22,258,250...22,292,403
JBrowse link
G Ctnna3 catenin alpha 3 involved_in ISO (PMID:23136403) BHF-UCL PMID:23136403 NCBI chrNW_004955425:18,623,645...20,126,200
Ensembl chrNW_004955425:18,628,961...20,087,647
JBrowse link
G Dlg1 discs large MAGUK scaffold protein 1 involved_in ISO (MGI:5816439|PMID:25447080) BHF-UCL PMID:25447080 MGI:5816439 NCBI chrNW_004955420:13,068,289...13,273,805
Ensembl chrNW_004955420:13,068,289...13,273,805
JBrowse link
G Dsc2 desmocollin 2 involved_in ISO (PMID:23863954) BHF-UCL PMID:23863954 NCBI chrNW_004955402:18,465,631...18,496,948
Ensembl chrNW_004955402:18,464,989...18,489,475
JBrowse link
G Dsg2 desmoglein 2 involved_in ISO (PMID:16505173), (PMID:23381804) BHF-UCL PMID:16505173 PMID:23381804 NCBI chrNW_004955402:18,826,400...18,876,188 JBrowse link
G Dsp desmoplakin involved_in ISO (PMID:12373648) BHF-UCL PMID:12373648 NCBI chrNW_004955465:6,356,970...6,391,206
Ensembl chrNW_004955465:6,356,863...6,392,207
JBrowse link
G Jup junction plakoglobin involved_in ISO (PMID:17924338) BHF-UCL PMID:17924338 NCBI chrNW_004955451:15,993,055...16,004,152
Ensembl chrNW_004955451:15,989,180...16,004,155
JBrowse link
G Pkp2 plakophilin 2 involved_in ISO (PMID:22889254) BHF-UCL PMID:22889254 NCBI chrNW_004955505:2,878,001...2,959,299
Ensembl chrNW_004955505:2,878,081...2,958,404
JBrowse link
G Ryr2 ryanodine receptor 2 involved_in ISO (PMID:17875969) BHF-UCL PMID:17875969 NCBI chrNW_004955492:2,647,597...3,275,512
Ensembl chrNW_004955492:2,648,956...3,076,509
JBrowse link
G Trpm4 transient receptor potential cation channel subfamily M member 4 involved_in ISO (PMID:27207958) BHF-UCL PMID:27207958 NCBI chrNW_004955559:1,539,036...1,581,800
Ensembl chrNW_004955559:1,546,365...1,581,712
JBrowse link
ventricular cardiac muscle cell action potential term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ank2 ankyrin 2 involved_in ISO (PMID:17242276) BHF-UCL PMID:17242276 NCBI chrNW_004955457:13,624,590...13,938,427
Ensembl chrNW_004955457:13,624,413...14,076,261
JBrowse link
G Cav3 caveolin 3 involved_in ISO PMID:22879586 BHF-UCL PMID:22879586 RGD:8553349 NCBI chrNW_004955561:326,008...335,911
Ensembl chrNW_004955561:325,944...335,914
JBrowse link
G Gja5 gap junction protein alpha 5 acts_upstream_of_or_within ISO (MGI:1197846|PMID:9501070) MGI PMID:9501070 MGI:1197846 NCBI chrNW_004955568:635,319...652,692
Ensembl chrNW_004955568:635,042...653,349
JBrowse link
G Gpd1l glycerol-3-phosphate dehydrogenase 1 like involved_in ISO (PMID:17967977), (PMID:19666841) BHF-UCL PMID:17967977 PMID:19666841 NCBI chrNW_004955430:23,481,957...23,536,407
Ensembl chrNW_004955430:23,481,957...23,539,495
JBrowse link
G Kcne1 potassium voltage-gated channel subfamily E regulatory subunit 1 involved_in ISO (PMID:9354802) BHF-UCL PMID:9354802 NCBI chrNW_004955407:33,807,581...33,814,356 JBrowse link
G Kcne2 potassium voltage-gated channel subfamily E regulatory subunit 2 involved_in
acts_upstream_of_or_within
ISO (PMID:10219239)
(MGI:3813163|PMID:18603586)
BHF-UCL
MGI
PMID:10219239 PMID:18603586 MGI:3813163 NCBI chrNW_004955407:33,734,969...33,736,609
Ensembl chrNW_004955407:33,735,148...33,735,513
JBrowse link
G Kcne5 potassium voltage-gated channel subfamily E regulatory subunit 5 involved_in ISO (PMID:21493962) BHF-UCL PMID:21493962 NCBI chrNW_004955490:6,242,197...6,243,627 JBrowse link
G Kcnh2 potassium voltage-gated channel subfamily H member 2 involved_in ISO (PMID:21536673) BHF-UCL PMID:21536673 NCBI chrNW_004955491:5,391,444...5,422,241
Ensembl chrNW_004955491:5,391,384...5,422,241
JBrowse link
G Kcnq1 potassium voltage-gated channel subfamily Q member 1 involved_in ISO (PMID:8528244) BHF-UCL PMID:8528244 NCBI chrNW_004955422:14,212,563...14,544,556
Ensembl chrNW_004955422:14,212,553...14,544,556
JBrowse link
G Nedd4l NEDD4 like E3 ubiquitin protein ligase involved_in ISO PMID:22879586 BHF-UCL PMID:22879586 RGD:8553349 NCBI chrNW_004955402:42,339,380...42,688,661
Ensembl chrNW_004955402:42,339,380...42,688,714
JBrowse link
G Pkp2 plakophilin 2 involved_in ISO (PMID:22889254) BHF-UCL PMID:22889254 NCBI chrNW_004955505:2,878,001...2,959,299
Ensembl chrNW_004955505:2,878,081...2,958,404
JBrowse link
G Ryr2 ryanodine receptor 2 involved_in ISO (MGI:3820489|PMID:17872467) BHF-UCL PMID:17872467 MGI:3820489 NCBI chrNW_004955492:2,647,597...3,275,512
Ensembl chrNW_004955492:2,648,956...3,076,509
JBrowse link
G Scn3b sodium voltage-gated channel beta subunit 3 involved_in
acts_upstream_of_or_within
ISO (PMID:20042427)
(MGI:5294649|PMID:19351516)
BHF-UCL
MGI
PMID:19351516 PMID:20042427 MGI:5294649 NCBI chrNW_004955412:24,391,764...24,412,912
Ensembl chrNW_004955412:24,388,366...24,412,604
JBrowse link
G Scn5a sodium voltage-gated channel alpha subunit 5 involved_in ISO (PMID:22529811) BHF-UCL PMID:22529811 NCBI chrNW_004955427:25,295,517...25,371,419
Ensembl chrNW_004955427:25,295,514...25,371,552
JBrowse link
G Snta1 syntrophin alpha 1 involved_in ISO (PMID:18591664) BHF-UCL PMID:18591664 NCBI chrNW_004955422:27,844,699...27,872,104
Ensembl chrNW_004955422:27,844,853...27,871,547
JBrowse link
vesicle transport along actin filament term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actn4 actinin alpha 4 involved_in ISO (PMID:25918384) UniProt PMID:25918384 NCBI chrNW_004955468:770,573...841,859
Ensembl chrNW_004955468:770,573...842,209
JBrowse link
G Fnbp1l formin binding protein 1 like involved_in ISO (PMID:20730103) BHF-UCL PMID:20730103 NCBI chrNW_004955423:1,115,828...1,220,316
Ensembl chrNW_004955423:1,119,471...1,220,835
JBrowse link
G Myo1c myosin IC acts_upstream_of_or_within ISO (MGI:2447241|PMID:12490950) MGI PMID:12490950 MGI:2447241 NCBI chrNW_004955481:1,676,788...1,701,421
Ensembl chrNW_004955481:1,676,728...1,703,488
JBrowse link
G Myo5a myosin VA involved_in ISO (PMID:24006491) RGD
UniProt
PMID:11470781 PMID:16190983 PMID:24006491 RGD:1600832 RGD:2306437 NCBI chrNW_004955409:2,409,503...2,530,539
Ensembl chrNW_004955409:2,428,815...2,530,012
JBrowse link
G Wasl WASP like actin nucleation promoting factor involved_in ISO PMID:20730103 BHF-UCL PMID:20730103 RGD:8554834 NCBI chrNW_004955479:5,167,851...5,200,512
Ensembl chrNW_004955479:5,166,393...5,200,512
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 11978
    cellular process 11211
      actin filament-based process 623
        actin filament-based movement 106
          actin-mediated cell contraction + 88
          mitochondrion migration along actin filament 1
          nuclear migration along microfilament 2
          positive regulation of actin filament-based movement + 3
          regulation of actin filament-based movement + 45
          vesicle transport along actin filament + 5
paths to the root