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ONTOLOGY REPORT - ANNOTATIONS

Term:DNA strand elongation
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Accession:GO:0022616 term browser browse the term
Definition:The DNA metabolic process in which an existing DNA strand is extended by activities including the addition of nucleotides to the 3' end of the strand.


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DNA strand elongation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TERT telomerase reverse transcriptase involved_in IDA (PMID:16043710) BHF-UCL PMID:16043710 NCBI chr 5:1,253,167...1,295,068
Ensembl chr 5:1,253,147...1,295,068 		JBrowse link
DNA replication, Okazaki fragment processing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DNA2 DNA replication helicase/nuclease 2 involved_in IEA
IDA		 (PMID:22570407) UniProt PMID:22570407 GO_REF:0000104 NCBI chr10:68,414,064...68,472,521
Ensembl chr10:68,414,064...68,472,121 		JBrowse link
DNA strand elongation involved in DNA replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MCM3 minichromosome maintenance complex component 3 involved_in IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr 6:52,264,015...52,284,742
Ensembl chr 6:52,264,014...52,284,881 		JBrowse link
G MCM4 minichromosome maintenance complex component 4 involved_in IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr 8:47,960,941...47,978,160
Ensembl chr 8:47,960,185...47,978,160 		JBrowse link
G MCM7 minichromosome maintenance complex component 7 involved_in IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr 7:100,092,728...100,101,397
Ensembl chr 7:100,092,233...100,101,940 		JBrowse link
G POLA1 DNA polymerase alpha 1, catalytic subunit involved_in IMP (PMID:4084590) UniProt PMID:4084590 NCBI chr  X:24,693,918...24,996,986
Ensembl chr  X:24,693,873...24,996,986 		JBrowse link
G POLD2 DNA polymerase delta 2, accessory subunit involved_in IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr 7:44,114,680...44,124,325
Ensembl chr 7:44,114,631...44,124,358 		JBrowse link
G POLD3 DNA polymerase delta 3, accessory subunit involved_in IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr11:74,592,582...74,669,341
Ensembl chr11:74,493,851...74,669,117 		JBrowse link
G RFC3 replication factor C subunit 3 involved_in TAS (PMID:7774928) PINC PMID:7774928 NCBI chr13:33,818,149...33,977,377
Ensembl chr13:33,818,069...33,966,558 		JBrowse link
G RFC4 replication factor C subunit 4 involved_in TAS (PMID:7774928) PINC PMID:7774928 NCBI chr 3:186,789,900...186,806,482
Ensembl chr 3:186,789,880...186,807,058 		JBrowse link
DNA strand elongation involved in mitotic DNA replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GINS1 GINS complex subunit 1 involved_in IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr20:25,407,673...25,448,563
Ensembl chr20:25,391,008...25,452,700 		JBrowse link
lagging strand elongation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LIG1 DNA ligase 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr19:48,115,445...48,170,344
Ensembl chr19:48,115,445...48,170,603 		JBrowse link
G LIG3 DNA ligase 3 involved_in IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr17:34,980,512...35,010,872
Ensembl chr17:34,980,512...35,009,743 		JBrowse link
G POLA1 DNA polymerase alpha 1, catalytic subunit involved_in IDA
IBA
IEA		 (PMID:2175912), (PMID:7910375) UniProt
GO_Central
TreeGrafter		 PMID:2175912 PMID:7910375 GO_REF:0000033 GO_REF:0000118 NCBI chr  X:24,693,918...24,996,986
Ensembl chr  X:24,693,873...24,996,986 		JBrowse link
leading strand elongation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PCNA proliferating cell nuclear antigen involved_in IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr20:5,114,953...5,126,622
Ensembl chr20:5,114,953...5,126,626 		JBrowse link
G POLA1 DNA polymerase alpha 1, catalytic subunit involved_in IDA
IBA
IEA		 (PMID:2175912), (PMID:7910375) UniProt
GO_Central
TreeGrafter		 PMID:2175912 PMID:7910375 GO_REF:0000033 GO_REF:0000118 NCBI chr  X:24,693,918...24,996,986
Ensembl chr  X:24,693,873...24,996,986 		JBrowse link
G POLE DNA polymerase epsilon, catalytic subunit involved_in IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr12:132,623,762...132,687,342
Ensembl chr12:132,623,753...132,687,376 		JBrowse link
G POLE3 DNA polymerase epsilon 3, accessory subunit involved_in IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr 9:113,407,235...113,410,749
Ensembl chr 9:113,407,235...113,410,675 		JBrowse link
Okazaki fragment processing involved in mitotic DNA replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LIG1 DNA ligase 1 involved_in IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr19:48,115,445...48,170,344
Ensembl chr19:48,115,445...48,170,603 		JBrowse link
positive regulation of DNA strand elongation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G POT1 protection of telomeres 1 involved_in IDA (PMID:16043710) BHF-UCL PMID:16043710 NCBI chr 7:124,822,386...124,929,825
Ensembl chr 7:124,822,386...124,929,983 		JBrowse link
regulation of DNA strand elongation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACTL6A actin like 6A involved_in IMP (PMID:25016522) ComplexPortal PMID:25016522 NCBI chr 3:179,562,926...179,588,407
Ensembl chr 3:179,562,886...179,588,407 		JBrowse link
G ACTR5 actin related protein 5 involved_in IMP (PMID:25016522) ComplexPortal PMID:25016522 NCBI chr20:38,748,460...38,772,520
Ensembl chr20:38,748,460...38,772,520 		JBrowse link
G ACTR8 actin related protein 8 involved_in IMP (PMID:25016522) ComplexPortal PMID:25016522 NCBI chr 3:53,858,992...53,882,152
Ensembl chr 3:53,867,066...53,882,152 		JBrowse link
G INO80 INO80 complex ATPase subunit involved_in IMP (PMID:25016522) ComplexPortal PMID:25016522 NCBI chr15:40,978,880...41,116,280
Ensembl chr15:40,978,880...41,116,280 		JBrowse link
G INO80B INO80 complex subunit B involved_in IMP (PMID:25016522) ComplexPortal PMID:25016522 NCBI chr 2:74,455,087...74,457,944
Ensembl chr 2:74,455,087...74,457,944 		JBrowse link
G INO80C INO80 complex subunit C involved_in IMP (PMID:25016522) ComplexPortal PMID:25016522 NCBI chr18:35,468,333...35,497,960
Ensembl chr18:35,452,230...35,497,979 		JBrowse link
G INO80D INO80 complex subunit D involved_in IMP (PMID:25016522) ComplexPortal PMID:25016522 NCBI chr 2:205,993,721...206,086,174
Ensembl chr 2:205,993,721...206,086,303 		JBrowse link
G INO80E INO80 complex subunit E involved_in IMP (PMID:25016522) ComplexPortal PMID:25016522 NCBI chr16:29,996,241...30,005,791
Ensembl chr16:29,995,715...30,005,793 		JBrowse link
G MCRS1 microspherule protein 1 involved_in IMP (PMID:25016522) ComplexPortal PMID:25016522 NCBI chr12:49,558,299...49,568,142
Ensembl chr12:49,556,544...49,568,145 		JBrowse link
G NFRKB nuclear factor related to kappaB binding protein involved_in IMP (PMID:25016522) ComplexPortal PMID:25016522 NCBI chr11:129,863,636...129,895,578
Ensembl chr11:129,863,636...129,895,590 		JBrowse link
G NUCKS1 nuclear casein kinase and cyclin dependent kinase substrate 1 involved_in IMP (PMID:26323318) ParkinsonsUK-UCL PMID:26323318 NCBI chr 1:205,712,822...205,750,182
Ensembl chr 1:205,712,822...205,750,182 		JBrowse link
G RUVBL1 RuvB like AAA ATPase 1 involved_in IMP (PMID:25016522) ComplexPortal PMID:25016522 NCBI chr 3:128,064,785...128,153,914
Ensembl chr 3:128,064,778...128,153,914 		JBrowse link
G RUVBL2 RuvB like AAA ATPase 2 involved_in IMP (PMID:25016522) ComplexPortal PMID:25016522 NCBI chr19:48,993,448...49,015,995
Ensembl chr19:48,993,562...49,015,970 		JBrowse link
G TFPT TCF3 fusion partner involved_in IMP (PMID:25016522) ComplexPortal PMID:25016522 NCBI chr19:54,107,020...54,115,657
Ensembl chr19:54,107,020...54,115,657 		JBrowse link
G UCHL5 ubiquitin C-terminal hydrolase L5 involved_in IMP (PMID:25016522) ComplexPortal PMID:25016522 NCBI chr 1:193,012,254...193,060,076
Ensembl chr 1:193,012,250...193,060,080 		JBrowse link
G YY1 YY1 transcription factor involved_in IMP (PMID:25016522) ComplexPortal PMID:25016522 NCBI chr14:100,239,144...100,282,788
Ensembl chr14:100,238,298...100,282,788 		JBrowse link
telomeric 3' overhang formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DCLRE1B DNA cross-link repair 1B involved_in IEA
ISS		 Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:113,904,619...113,914,086
Ensembl chr 1:113,904,619...113,914,086 		JBrowse link
G MRE11 MRE11 homolog, double strand break repair nuclease involved_in IMP (PMID:16374507) BHF-UCL PMID:16374507 NCBI chr11:94,415,570...94,512,412
Ensembl chr11:94,415,570...94,493,885 		JBrowse link
G NBN nibrin involved_in IMP (PMID:16374507) BHF-UCL PMID:16374507 NCBI chr 8:89,933,331...89,984,667
Ensembl chr 8:89,924,515...90,003,228 		JBrowse link
G RAD50 RAD50 double strand break repair protein involved_in IMP (PMID:16374507) BHF-UCL PMID:16374507 NCBI chr 5:132,556,977...132,646,349
Ensembl chr 5:132,556,019...132,646,349 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19770
    metabolic process 12509
      primary metabolic process 10757
        nucleobase-containing compound metabolic process 6564
          nucleic acid metabolic process 5957
            DNA metabolic process 1100
              DNA strand elongation 37
                DNA strand elongation involved in DNA replication + 15
                positive regulation of DNA strand elongation 1
                regulation of DNA strand elongation + 17
                telomeric 3' overhang formation 4
Path 2
Term Annotations click to browse term
  biological_process 19770
    metabolic process 12509
      organic substance metabolic process 12005
        organic cyclic compound metabolic process 7095
          nucleobase-containing compound metabolic process 6564
            nucleic acid metabolic process 5957
              DNA metabolic process 1100
                DNA strand elongation 37
                  DNA strand elongation involved in DNA replication + 15
                  positive regulation of DNA strand elongation 1
                  regulation of DNA strand elongation + 17
                  telomeric 3' overhang formation 4
paths to the root