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ONTOLOGY REPORT - ANNOTATIONS

Term:circadian sleep/wake cycle process
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Accession:GO:0022410 term browser browse the term
Definition:A behavioral process involved in the cycle from wakefulness through an orderly succession of sleep states and stages that occurs on an approximately 24 hour rhythm.


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circadian sleep/wake cycle process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hcrtr2 hypocretin (orexin) receptor 2 involved_in IEA InterPro GO_REF:0000002 NCBI chr 9:76,133,162...76,230,905
Ensembl chr 9:76,133,162...76,231,138 		JBrowse link
circadian sleep/wake cycle, non-REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Btbd9 BTB domain containing 9 acts_upstream_of_or_within IMP (PMID:22678064) MGI PMID:22678064 NCBI chr17:30,434,498...30,801,595
Ensembl chr17:30,434,498...30,795,462 		JBrowse link
circadian sleep/wake cycle, REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gabrb3 GABRB3, gamma-aminobutyric acid type A receptor subunit beta 3 acts_upstream_of_or_within IMP (PMID:12419540) MGI PMID:12419540 NCBI chr 7:57,240,266...57,478,550
Ensembl chr 7:57,069,440...57,478,550 		JBrowse link
circadian sleep/wake cycle, sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pln phospholamban involved_in IMP (PMID:38493225) UniProt PMID:38493225 NCBI chr10:53,213,782...53,222,095
Ensembl chr10:53,213,763...53,222,083 		JBrowse link
negative regulation of circadian sleep/wake cycle, non-REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ada adenosine deaminase involved_in ISO RGD
GO_Central		 PMID:19066225 GO_REF:0000096 RGD:5128864 NCBI chr 2:163,565,703...163,592,154
Ensembl chr 2:163,568,504...163,592,159 		JBrowse link
G Adora1 adenosine A1 receptor involved_in ISO
IEA		 RGD
GO_Central
Ensembl		 PMID:19491711 GO_REF:0000096 GO_REF:0000107 RGD:2317916 NCBI chr 1:134,126,953...134,163,195
Ensembl chr 1:134,126,963...134,163,169 		JBrowse link
negative regulation of circadian sleep/wake cycle, REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ghrl ghrelin involved_in ISO
IEA		 GO_Central
Ensembl		 GO_REF:0000107 GO_REF:0000119 NCBI chr 6:113,693,080...113,696,872
Ensembl chr 6:113,693,080...113,696,841 		JBrowse link
negative regulation of circadian sleep/wake cycle, sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adora1 adenosine A1 receptor involved_in ISO in the sleep-promoting area of the lateral preoptic area of the brain RGD
GO_Central		 PMID:16109808 GO_REF:0000096 RGD:1625234 NCBI chr 1:134,126,953...134,163,195
Ensembl chr 1:134,126,963...134,163,169 		JBrowse link
G Drd1 dopamine receptor D1 involved_in ISO RGD
GO_Central		 PMID:12944496 GO_REF:0000096 RGD:1581422 NCBI chr13:54,205,202...54,209,677
Ensembl chr13:54,205,202...54,209,724 		JBrowse link
G Drd2 dopamine receptor D2 involved_in ISO
IEA		 RGD
GO_Central
Ensembl		 PMID:12944496 GO_REF:0000096 GO_REF:0000107 RGD:1581422 NCBI chr 9:49,251,703...49,319,468
Ensembl chr 9:49,251,927...49,319,477 		JBrowse link
negative regulation of circadian sleep/wake cycle, wakefulness term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ptger3 prostaglandin E receptor 3 (subtype EP3) involved_in ISO RGD
GO_Central		 PMID:10923657 GO_REF:0000096 RGD:10043386 NCBI chr 3:157,272,459...157,350,392
Ensembl chr 3:157,272,529...157,351,525 		JBrowse link
positive regulation of circadian sleep/wake cycle, non-REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alb albumin involved_in ISO RGD
GO_Central		 PMID:9748091 GO_REF:0000096 RGD:1625449 NCBI chr 5:90,608,729...90,624,461
Ensembl chr 5:90,608,756...90,624,461 		JBrowse link
G Casp1 caspase 1 involved_in ISO RGD
GO_Central		 PMID:16455762 GO_REF:0000096 RGD:2315921 NCBI chr 9:5,298,517...5,307,281
Ensembl chr 9:5,298,508...5,307,290 		JBrowse link
G Ghrh growth hormone releasing hormone involved_in ISO RGD
GO_Central		 PMID:19889861 PMID:20237285 GO_REF:0000096 RGD:10401262 RGD:2325188 NCBI chr 2:157,171,416...157,190,645
Ensembl chr 2:157,171,417...157,189,426 		JBrowse link
G Ghrhr growth hormone releasing hormone receptor involved_in ISO RGD
GO_Central		 PMID:20237285 GO_REF:0000096 RGD:10401262 NCBI chr 6:55,353,204...55,365,515
Ensembl chr 6:55,353,280...55,365,515 		JBrowse link
G Ghrl ghrelin involved_in IEA
ISO		 Ensembl
GO_Central		 GO_REF:0000107 GO_REF:0000119 NCBI chr 6:113,693,080...113,696,872
Ensembl chr 6:113,693,080...113,696,841 		JBrowse link
G Mtnr1b melatonin receptor 1B involved_in ISO RGD
GO_Central		 PMID:19429170 PMID:22171046 GO_REF:0000096 RGD:9588660 RGD:9588665 NCBI chr 9:15,773,910...15,785,852
Ensembl chr 9:15,735,824...15,785,852 		JBrowse link
G Npy2r neuropeptide Y receptor Y2 involved_in ISO RGD
GO_Central		 PMID:16378653 GO_REF:0000096 RGD:1642507 NCBI chr 3:82,445,688...82,455,404
Ensembl chr 3:82,445,690...82,455,391 		JBrowse link
G Ptger3 prostaglandin E receptor 3 (subtype EP3) involved_in ISO RGD
GO_Central		 PMID:10923657 GO_REF:0000096 RGD:10043386 NCBI chr 3:157,272,459...157,350,392
Ensembl chr 3:157,272,529...157,351,525 		JBrowse link
G Ptger4 prostaglandin E receptor 4 (subtype EP4) involved_in ISO RGD
GO_Central		 PMID:10923657 GO_REF:0000096 RGD:10043386 NCBI chr15:5,262,880...5,273,668
Ensembl chr15:5,236,142...5,273,668 		JBrowse link
positive regulation of circadian sleep/wake cycle, REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ghrh growth hormone releasing hormone NOT|involved_in ISO (PMID:15538933) BHF-UCL PMID:15538933 NCBI chr 2:157,171,416...157,190,645
Ensembl chr 2:157,171,417...157,189,426 		JBrowse link
G Pmch pro-melanin-concentrating hormone involved_in ISO RGD
GO_Central		 PMID:12964948 GO_REF:0000096 RGD:1642489 NCBI chr10:87,926,934...87,928,236
Ensembl chr10:87,926,934...87,928,237 		JBrowse link
G Uts2 urotensin 2 involved_in ISO
IEA		 RGD
Ensembl
GO_Central		 PMID:15944374 GO_REF:0000096 GO_REF:0000107 RGD:2306844 NCBI chr 4:151,081,554...151,086,267
Ensembl chr 4:151,081,554...151,086,267 		JBrowse link
G Uts2r urotensin 2 receptor involved_in ISO RGD
GO_Central		 PMID:15944374 GO_REF:0000096 RGD:2306844 NCBI chr11:121,051,097...121,052,799
Ensembl chr11:121,051,097...121,052,799 		JBrowse link
positive regulation of circadian sleep/wake cycle, sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adora2a adenosine A2a receptor involved_in ISO
IEA		 in the sleep-promoting area of the lateral preoptic area of the brain RGD
GO_Central
Ensembl		 PMID:16109808 GO_REF:0000096 GO_REF:0000107 RGD:1625234 NCBI chr10:75,152,711...75,170,626
Ensembl chr10:75,152,711...75,170,618 		JBrowse link
positive regulation of circadian sleep/wake cycle, wakefulness term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nlgn1 neuroligin 1 involved_in IMP (PMID:23716671) UniProt PMID:23716671 NCBI chr 3:25,475,972...26,387,504
Ensembl chr 3:25,480,379...26,386,609 		JBrowse link
G Nps neuropeptide S involved_in ISO
IEA		 RGD
Ensembl
GO_Central		 PMID:22300983 GO_REF:0000096 GO_REF:0000107 RGD:9831203 NCBI chr 7:134,870,348...134,874,671
Ensembl chr 7:134,860,432...134,874,671 		JBrowse link
G Uts2 urotensin 2 involved_in ISO
IEA		 RGD
GO_Central
Ensembl		 PMID:15944374 GO_REF:0000096 GO_REF:0000107 RGD:2306844 NCBI chr 4:151,081,554...151,086,267
Ensembl chr 4:151,081,554...151,086,267 		JBrowse link
G Uts2r urotensin 2 receptor involved_in ISO RGD
GO_Central		 PMID:15944374 GO_REF:0000096 RGD:2306844 NCBI chr11:121,051,097...121,052,799
Ensembl chr11:121,051,097...121,052,799 		JBrowse link
regulation of circadian sleep/wake cycle, non-REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chrnb2 cholinergic receptor nicotinic beta 2 subunit acts_upstream_of_or_within IMP (PMID:15215293) MGI PMID:15215293 NCBI chr 3:89,660,755...89,671,939
Ensembl chr 3:89,653,502...89,671,939 		JBrowse link
G Il6 interleukin 6 involved_in ISO RGD
GO_Central		 PMID:12667648 GO_REF:0000096 RGD:1358315 NCBI chr 5:30,218,112...30,224,973
Ensembl chr 5:30,218,112...30,224,979 		JBrowse link
G Kcna2 potassium voltage-gated channel, shaker-related subfamily, member 2 involved_in IMP (PMID:17925011) UniProt PMID:17925011 NCBI chr 3:106,998,203...107,022,321
Ensembl chr 3:107,008,462...107,022,321 		JBrowse link
G Parp1 poly (ADP-ribose) polymerase family, member 1 involved_in IMP (PMID:34798058) UniProt PMID:34798058 NCBI chr 1:180,396,456...180,428,564
Ensembl chr 1:180,396,489...180,428,819 		JBrowse link
regulation of circadian sleep/wake cycle, REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chrnb2 cholinergic receptor nicotinic beta 2 subunit acts_upstream_of_or_within IMP (PMID:15215293) MGI PMID:15215293 NCBI chr 3:89,660,755...89,671,939
Ensembl chr 3:89,653,502...89,671,939 		JBrowse link
regulation of circadian sleep/wake cycle, sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ada adenosine deaminase ISO RGD PMID:11038259 RGD:631747 NCBI chr 2:163,565,703...163,592,154
Ensembl chr 2:163,568,504...163,592,159 		JBrowse link
G Adrb1 adrenergic receptor, beta 1 involved_in ISO
IMP		 (PMID:25083013) GO_Central
UniProt		 PMID:25083013 GO_REF:0000119 NCBI chr19:56,710,549...56,713,582
Ensembl chr19:56,710,631...56,721,545 		JBrowse link
G Cort cortistatin involved_in ISO RGD
GO_Central		 PMID:8622767 GO_REF:0000096 RGD:727760 NCBI chr 4:149,209,491...149,211,132
Ensembl chr 4:149,209,491...149,211,220 		JBrowse link
G Csf2 colony stimulating factor 2 (granulocyte-macrophage) involved_in ISO RGD
GO_Central		 PMID:12047622 GO_REF:0000096 RGD:10449529 NCBI chr11:54,138,096...54,140,725
Ensembl chr11:54,138,097...54,140,493 		JBrowse link
G Drd3 dopamine receptor D3 involved_in ISO RGD
GO_Central		 PMID:15913875 GO_REF:0000096 RGD:1625069 NCBI chr16:43,574,285...43,646,353
Ensembl chr16:43,574,389...43,643,295 		JBrowse link
G Fxr1 FMR1 autosomal homolog 1 involved_in IMP (PMID:32893934) UniProt PMID:32893934 NCBI chr 3:34,074,133...34,124,129
Ensembl chr 3:34,074,092...34,124,471 		JBrowse link
G Nmu neuromedin U involved_in ISO GO_Central GO_REF:0000096 NCBI chr 5:76,481,342...76,511,624
Ensembl chr 5:76,481,342...76,511,635 		JBrowse link
G Per3 period circadian clock 3 involved_in ISS
IMP
ISO		 (PMID:21957163) UniProt
GO_Central		 PMID:21957163 GO_REF:0000024 GO_REF:0000119 NCBI chr 4:151,081,475...151,129,167
Ensembl chr 4:151,088,109...151,129,122 		JBrowse link
G Pglyrp1 peptidoglycan recognition protein 1 ISO RGD PMID:11145837 RGD:724610 NCBI chr 7:18,618,615...18,624,363
Ensembl chr 7:18,605,256...18,624,384 		JBrowse link
G Ptgds prostaglandin D2 synthase (brain) involved_in IDA (PMID:10781097) UniProt PMID:10781097 NCBI chr 2:25,356,723...25,360,080
Ensembl chr 2:25,356,721...25,360,058 		JBrowse link
regulation of circadian sleep/wake cycle, wakefulness term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hcrtr2 hypocretin (orexin) receptor 2 involved_in ISS UniProt GO_REF:0000024 NCBI chr 9:76,133,162...76,230,905
Ensembl chr 9:76,133,162...76,231,138 		JBrowse link
G Ptger3 prostaglandin E receptor 3 (subtype EP3) involved_in ISO RGD
GO_Central		 PMID:10923657 GO_REF:0000096 RGD:10043386 NCBI chr 3:157,272,459...157,350,392
Ensembl chr 3:157,272,529...157,351,525 		JBrowse link
G Ptger4 prostaglandin E receptor 4 (subtype EP4) involved_in ISO RGD
GO_Central		 PMID:10923657 GO_REF:0000096 RGD:10043386 NCBI chr15:5,262,880...5,273,668
Ensembl chr15:5,236,142...5,273,668 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 28636
    rhythmic process 438
      circadian rhythm 289
        circadian behavior 77
          circadian sleep/wake cycle process 36
            circadian sleep/wake cycle, REM sleep + 7
            circadian sleep/wake cycle, non-REM sleep + 16
            circadian sleep/wake cycle, sleep + 33
            circadian sleep/wake cycle, wakefulness + 7
Path 2
Term Annotations click to browse term
  biological_process 28636
    multicellular organismal process 9060
      behavior 890
        rhythmic behavior 80
          circadian behavior 77
            circadian sleep/wake cycle 44
              circadian sleep/wake cycle process 36
                circadian sleep/wake cycle, REM sleep + 7
                circadian sleep/wake cycle, non-REM sleep + 16
                circadian sleep/wake cycle, sleep + 33
                circadian sleep/wake cycle, wakefulness + 7
paths to the root