regulation of cell-cell adhesion - Ontology Report

(PMID:17548643)
PMID:21873635

PMID:17548643 PMID:21873635

NCBI chr 1:194,776,559...194,789,330
Ensembl chr 1:194,770,060...194,788,801

CD24 molecule

acts_upstream_of_or_within

(MGI:3757623|PMID:8117278)

PMID:8117278

MGI:3757623

NCBI chr20:47,074,353...47,079,662
Ensembl chr20:47,073,512...47,079,662

Celsr2

cadherin, EGF LAG seven-pass G-type receptor 2

involved_in

PMID:15955893

BHF-UCL

PMID:15955893

RGD:1579822

NCBI chr 2:196,029,206...196,053,848
Ensembl chr 2:196,029,434...196,053,845

Efna5

ephrin A5

involved_in

IBA
ISO
ISS

PMID:21873635
(MGI:2182552|PMID:11089974)
GO_REF:0000024
(PMID:11870224)

PMID:11089974 PMID:11870224 PMID:21873635

GO_REF:0000024 MGI:2182552, RGD:13792537

NCBI chr 9:102,316,753...102,595,480
Ensembl chr 9:102,320,295...102,597,413

Epha7

Eph receptor A7

involved_in

GO_REF:0000024
(MGI:2182552|PMID:11089974)

PMID:11089974

GO_REF:0000024 MGI:2182552

NCBI chr 5:42,975,353...43,128,703
Ensembl chr 5:42,975,405...43,127,112

Ephb3

Eph receptor B3

involved_in

(PMID:8397371)

PMID:8397371

NCBI chr11:79,840,668...79,859,467
Ensembl chr11:79,840,668...79,859,370

fucosyltransferase 7

involved_in

(PMID:10200296)
GO_REF:0000024

PMID:10200296

GO_REF:0000024

NCBI chr 3:8,237,687...8,242,273
Ensembl chr 3:8,239,384...8,242,260

Itgal

integrin subunit alpha L

acts_upstream_of_or_within

(MGI:3757623|PMID:8117278)

PMID:8117278

MGI:3757623

NCBI chr 1:181,918,183...181,955,735
Ensembl chr 1:181,918,183...181,955,732

lymphoid enhancer binding factor 1

acts_upstream_of_or_within

MGI:1926601 (MGI:3833040|PMID:19154719)

PMID:19154719

MGI:3833040

NCBI chr 2:219,666,549...219,779,815
Ensembl chr 2:219,666,592...219,779,794

Mink1

misshapen-like kinase 1

involved_in

(PMID:15469942)
GO_REF:0000107

PMID:15469942

GO_REF:0000107

NCBI chr10:55,278,293...55,330,782
Ensembl chr10:55,278,391...55,330,782

Nrarp

Notch-regulated ankyrin repeat protein

acts_upstream_of_or_within

MGI:3833551 (MGI:3833040|PMID:19154719)

PMID:19154719

MGI:3833040

NCBI chr 3:7,992,582...7,995,136
Ensembl chr 3:7,992,552...7,995,133

Pkhd1

PKHD1 ciliary IPT domain containing fibrocystin/polyductin

involved_in

(PMID:31398719)

PMID:31398719

NCBI chr 9:22,547,396...23,037,443
Ensembl chr 9:22,549,513...23,037,381

Podxl

podocalyxin-like

involved_in

IEA

GO_REF:0000002

InterPro

GO_REF:0000002

NCBI chr 4:60,135,124...60,181,829
Ensembl chr 4:60,135,109...60,181,899

Src

SRC proto-oncogene, non-receptor tyrosine kinase

involved_in

(PMID:21724833)

PMID:21724833

NCBI chr 3:146,091,969...146,139,492
Ensembl chr 3:146,091,841...146,139,476

Wnt4

Wnt family member 4

involved_in
acts_upstream_of_or_within

GO_REF:0000107
MGI:1857453 (MGI:4438994|PMID:20106871)

PMID:20106871

GO_REF:0000107 MGI:4438994

NCBI chr 5:149,513,573...149,535,415
Ensembl chr 5:149,514,018...149,532,859

Zdhhc2

zinc finger DHHC-type palmitoyltransferase 2

involved_in

GO_REF:0000024
(PMID:18508921)

PMID:18508921

GO_REF:0000024

NCBI chr16:51,808,465...51,878,060
Ensembl chr16:51,808,468...51,878,060

blood vessel endothelial cell delamination

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Trpv4

transient receptor potential cation channel, subfamily V, member 4

involved_in

(PMID:23136043)

PMID:23136043

NCBI chr12:41,938,533...41,977,517
Ensembl chr12:41,938,560...41,977,517

canonical Wnt signaling pathway involved in positive regulation of cell-cell adhesion

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Plpp3

phospholipid phosphatase 3

involved_in

(PMID:20123964)

PMID:20123964

NCBI chr 5:119,927,085...120,002,206
Ensembl chr 5:119,927,085...120,002,205

CD4-positive, alpha-beta T cell costimulation

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Cd81

Cd81 molecule

involved_in

(PMID:22307619)
GO_REF:0000024

PMID:22307619

GO_REF:0000024

NCBI chr 1:198,235,861...198,251,660
Ensembl chr 1:198,241,484...198,251,660

TNF superfamily member 4

involved_in

(MGI:4819294|PMID:20639485)

PMID:20639485

MGI:4819294

NCBI chr13:73,723,329...73,746,809
Ensembl chr13:73,723,329...73,746,788

corneocyte desquamation

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Abca12

ATP binding cassette subfamily A member 12

involved_in

(PMID:19179616)
(MGI:6161848|PMID:27551807)

PMID:19179616 PMID:27551807

MGI:6161848

NCBI chr 9:72,822,661...72,995,748
Ensembl chr 9:72,823,350...72,996,049

Cdsn

corneodesmosin

involved_in

(PMID:26014679)

PMID:26014679

NCBI chr20:3,179,432...3,185,854
Ensembl chr20:3,179,438...3,184,250

delamination

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Akna

AT-hook transcription factor

involved_in

(MGI:6294240|PMID:30787442)

PMID:30787442

MGI:6294240

NCBI chr 5:76,777,415...76,824,380
Ensembl chr 5:76,777,415...76,816,017

endothelial to hematopoietic transition

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Spi1

Spi-1 proto-oncogene

acts_upstream_of_or_within
involved_in

(PMID:25252941)
(MGI:6508505|PMID:25252941)

PMID:25252941

MGI:6508505

NCBI chr 3:77,059,744...77,093,730
Ensembl chr 3:77,073,012...77,092,393

negative regulation of activated T cell proliferation

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Arg1

arginase 1

involved_in

(MGI:5908339|PMID:19360123)

PMID:19360123

MGI:5908339

NCBI chr 1:20,475,878...20,488,422
Ensembl chr 1:20,475,968...20,488,422

Btn1a1

butyrophilin, subfamily 1, member A1

involved_in

(MGI:4453380|PMID:20208008)

PMID:20208008

MGI:4453380

NCBI chr17:41,654,237...41,663,427
Ensembl chr17:41,654,249...41,664,272

Btn2a2

butyrophilin, subfamily 2, member A2

acts_upstream_of_or_within
involved_in

(MGI:5520006|PMID:23589618)
(MGI:4453380|PMID:20208008)

PMID:20208008 PMID:23589618

MGI:4453380 MGI:5520006

NCBI chr17:41,620,807...41,632,621
Ensembl chr17:41,620,839...41,632,618

Casp3

caspase 3

acts_upstream_of_or_within

MGI:2178778 (MGI:2677082|PMID:12970760)

PMID:12970760

MGI:2677082

NCBI chr16:45,662,910...45,681,171
Ensembl chr16:45,662,910...45,684,648

CD274 molecule

involved_in

(PMID:12538684)
(PMID:17489864)

PMID:12538684 PMID:17489864

NCBI chr 1:227,116,627...227,137,379
Ensembl chr 1:227,116,649...227,134,450

Crtam

cytotoxic and regulatory T cell molecule

involved_in

(MGI:3834299|PMID:18329370)

PMID:18329370

MGI:3834299

NCBI chr 8:41,340,117...41,377,343
Ensembl chr 8:41,340,837...41,377,343

Ido1

indoleamine 2,3-dioxygenase 1

acts_upstream_of_or_within

MGI:3505776 (MGI:3776720|PMID:18077788)

PMID:18077788

MGI:3776720

NCBI chr16:67,430,684...67,442,459
Ensembl chr16:67,430,578...67,442,730

Laptm5

lysosomal protein transmembrane 5

involved_in

(MGI:3803048|PMID:18619870)

PMID:18619870

MGI:3803048

NCBI chr 5:143,087,759...143,109,807
Ensembl chr 5:143,087,759...143,109,807

galectin 9

involved_in

(PMID:23817958)

PMID:23817958

NCBI chr10:63,907,018...63,930,224
Ensembl chr10:63,907,018...63,930,045

leukocyte immunoglobulin like receptor B4

involved_in

(PMID:19380766)

PMID:19380766

NCBI chr 1:69,805,020...69,810,628
Ensembl chr 1:69,805,250...69,810,660

Lrrc32

leucine rich repeat containing 32

acts_upstream_of_or_within

(MGI:3807624|PMID:18628982)

PMID:18628982

MGI:3807624

NCBI chr 1:152,785,709...152,802,997
Ensembl chr 1:152,786,511...152,798,373

Mir181c

microRNA 181c

acts_upstream_of

(PMID:21112091)

PMID:21112091

NCBI chr19:23,983,523...23,983,628
Ensembl chr19:23,983,523...23,983,628

Pdcd1lg2

programmed cell death 1 ligand 2

involved_in

(PMID:12538684)

PMID:12538684

NCBI chr 1:227,158,941...227,223,938
Ensembl chr 1:227,158,941...227,223,938

Prkar1a

protein kinase cAMP-dependent type I regulatory subunit alpha

involved_in

(PMID:17911601)

PMID:17911601

NCBI chr10:94,621,042...94,639,534
Ensembl chr10:94,620,039...94,639,041

Prnp

prion protein

involved_in

(MGI:4943618|PMID:20145049)

PMID:20145049

MGI:4943618

NCBI chr 3:119,186,073...119,201,513
Ensembl chr 3:119,177,485...119,203,937

Rc3h1

ring finger and CCCH-type domains 1

involved_in

(MGI:5284769|PMID:18172933)

PMID:18172933

MGI:5284769

NCBI chr13:73,174,075...73,245,762
Ensembl chr13:73,173,946...73,238,839

Scrib

scribble planar cell polarity protein

involved_in

(MGI:3834299|PMID:18329370)

PMID:18329370

MGI:3834299

NCBI chr 7:107,759,343...107,782,364
Ensembl chr 7:107,759,343...107,782,331

negative regulation of alpha-beta T cell activation

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Adora2a

adenosine A2a receptor

acts_upstream_of_or_within

(MGI:3822045|PMID:10069416)

PMID:10069416

MGI:3822045

NCBI chr20:13,315,848...13,333,386
Ensembl chr20:13,315,853...13,333,386

Vsir

V-set immunoregulatory receptor

involved_in

PMID:21873635

GO_Central

NCBI chr20:28,281,582...28,307,262
Ensembl chr20:28,281,596...28,303,878

negative regulation of alpha-beta T cell differentiation

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Gli3

GLI family zinc finger 3

involved_in

(MGI:4355451|PMID:19667090)

PMID:19667090

MGI:4355451

NCBI chr17:49,438,567...49,709,712
Ensembl chr17:49,438,567...49,709,712

Indian hedgehog signaling molecule

involved_in

(MGI:3836494|PMID:19109233)

NCBI chr 9:76,504,315...76,510,532
Ensembl chr 9:76,504,315...76,510,532

sonic hedgehog signaling molecule

involved_in
acts_upstream_of_or_within

GO_REF:0000107
(MGI:1888832|PMID:10981962)

PMID:10981962

GO_REF:0000107 MGI:1888832

NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170

negative regulation of alpha-beta T cell proliferation

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Btla

B and T lymphocyte associated

acts_upstream_of_or_within

MGI:3027713 (MGI:3521631|PMID:15568026)

PMID:15568026

MGI:3521631

NCBI chr11:55,563,683...55,588,187
Ensembl chr11:55,564,899...55,587,181

Cblb

Cbl proto-oncogene B

acts_upstream_of_or_within

MGI:2180572 (MGI:3038342|PMID:14973438)

MGI:3038342

NCBI chr11:48,589,878...48,756,940
Ensembl chr11:48,592,703...48,756,839

Clec4g

C-type lectin domain family 4, member G

acts_upstream_of_or_within

MGI:5510586 (MGI:5475030|PMID:23487419)

PMID:23487419

MGI:5475030

NCBI chr12:1,780,370...1,785,027
Ensembl chr12:1,780,371...1,784,985

forkhead box P3

acts_upstream_of_or_within

MGI:1857034 (MGI:3692513|PMID:16945588)

PMID:16945588

MGI:3692513

NCBI chr X:14,908,494...14,924,994
Ensembl chr X:14,908,494...14,923,838

Itch

itchy E3 ubiquitin protein ligase

acts_upstream_of_or_within

MGI:1856404 (MGI:3038342|PMID:14973438)

MGI:3038342

NCBI chr 3:143,642,348...143,733,745
Ensembl chr 3:143,645,637...143,733,543

Tnfrsf14

TNF receptor superfamily member 14

acts_upstream_of_or_within
involved_in

(MGI:3521631|PMID:15568026)
PMID:21873635

PMID:15568026 PMID:21873635

MGI:3521631, RGD:13792537

NCBI chr 5:165,486,069...165,494,421
Ensembl chr 5:165,484,262...165,493,703

negative regulation of calcium-independent cell-cell adhesion

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Bmp2

bone morphogenetic protein 2

involved_in

(PMID:16194878)
GO_REF:0000107

PMID:16194878

GO_REF:0000107

NCBI chr 3:120,812,660...120,822,579
Ensembl chr 3:120,812,882...120,821,397

negative regulation of CD4-positive, alpha-beta T cell activation

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Tarm1

T cell-interacting, activating receptor on myeloid cells 1

involved_in

(PMID:26311901)

PMID:26311901

NCBI chr 1:65,666,742...65,682,402
Ensembl chr 1:65,671,902...65,679,626

Twsg1

twisted gastrulation BMP signaling modulator 1

involved_in

(PMID:17164348)

PMID:17164348

NCBI chr 9:105,533,116...105,567,525
Ensembl chr 9:105,533,136...105,567,479

negative regulation of CD4-positive, alpha-beta T cell costimulation

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Cd160

CD160 molecule

involved_in

(PMID:18193050)

PMID:18193050

NCBI chr 2:184,340,820...184,383,421
Ensembl chr 2:184,340,599...184,375,834

negative regulation of CD4-positive, alpha-beta T cell differentiation

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Cbfb

core-binding factor subunit beta

involved_in

(MGI:3772948|PMID:18258917)

NCBI chr19:33,049,162...33,092,752
Ensembl chr19:33,049,172...33,092,751

Hmgb1

high mobility group box 1

involved_in

(PMID:22473704)

PMID:22473704

NCBI chr12:5,973,062...5,978,565
Ensembl chr12:5,901,586...5,978,565

Runx1

RUNX family transcription factor 1

involved_in

GO_REF:0000024
(MGI:3772948|PMID:18258917)

GO_REF:0000024 MGI:3772948

NCBI chr11:31,839,880...32,074,427
Ensembl chr11:31,843,764...32,074,542

Runx3

RUNX family transcription factor 3

involved_in

(MGI:3772948|PMID:18258917)

NCBI chr 5:147,393,926...147,419,161
Ensembl chr 5:147,360,994...147,419,156

negative regulation of CD4-positive, alpha-beta T cell proliferation

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Arg2

arginase 2

involved_in

GO_REF:0000107
(MGI:5908533|PMID:25009204)

PMID:25009204

GO_REF:0000107 MGI:5908533

NCBI chr 6:97,936,002...97,961,379
Ensembl chr 6:97,936,002...97,961,378

Cblb

Cbl proto-oncogene B

acts_upstream_of_or_within
involved_in

MGI:2180572 (MGI:3038342|PMID:14973438)
GO_REF:0000107

GO_REF:0000107 MGI:3038342

NCBI chr11:48,589,878...48,756,940
Ensembl chr11:48,592,703...48,756,839

CD274 molecule

involved_in

(PMID:24691993)

PMID:24691993

NCBI chr 1:227,116,627...227,137,379
Ensembl chr 1:227,116,649...227,134,450

CD44 molecule (Indian blood group)

involved_in

(MGI:5688819|PMID:25065622)

PMID:25065622

MGI:5688819

NCBI chr 3:89,155,850...89,244,615
Ensembl chr 3:89,157,058...89,244,620

forkhead box P3

acts_upstream_of_or_within

(MGI:3697020|PMID:17028180)

PMID:17028180

MGI:3697020

NCBI chr X:14,908,494...14,924,994
Ensembl chr X:14,908,494...14,923,838

Itch

itchy E3 ubiquitin protein ligase

acts_upstream_of_or_within

MGI:1856404 (MGI:3038342|PMID:14973438)

MGI:3038342

NCBI chr 3:143,642,348...143,733,745
Ensembl chr 3:143,645,637...143,733,543

Lgals5

galectin 5

involved_in

PMID:21873635

GO_Central

NCBI chr10:63,853,949...63,857,198
Ensembl chr10:63,853,935...63,857,153

Lgals7

galectin 7

involved_in

PMID:21873635

GO_Central

NCBI chr 1:84,148,612...84,152,016
Ensembl chr 1:84,150,252...84,152,015

galectin 9

involved_in

(PMID:20209097)
(MGI:5688819|PMID:25065622)
PMID:21873635

PMID:20209097 PMID:25065622 PMID:21873635

MGI:5688819, RGD:13792537

NCBI chr10:63,907,018...63,930,224
Ensembl chr10:63,907,018...63,930,045

Ndfip1

Nedd4 family interacting protein 1

acts_upstream_of_or_within

MGI:3695433 (MGI:3694584|PMID:17137798)

PMID:17137798

MGI:3694584

NCBI chr18:30,265,808...30,316,068
Ensembl chr18:30,250,613...30,322,311

Tarm1

T cell-interacting, activating receptor on myeloid cells 1

involved_in

(MGI:5908526|PMID:26311901)

PMID:26311901

MGI:5908526

NCBI chr 1:65,666,742...65,682,402
Ensembl chr 1:65,671,902...65,679,626

Tnfrsf14

TNF receptor superfamily member 14

acts_upstream_of_or_within

(MGI:3521631|PMID:15568026)

PMID:15568026

MGI:3521631

NCBI chr 5:165,486,069...165,494,421
Ensembl chr 5:165,484,262...165,493,703

Twsg1

twisted gastrulation BMP signaling modulator 1

involved_in

(PMID:17164348)

PMID:17164348

NCBI chr 9:105,533,116...105,567,525
Ensembl chr 9:105,533,136...105,567,479

Vsir

V-set immunoregulatory receptor

involved_in
acts_upstream_of_or_within

(PMID:24691993)
(MGI:5292805|PMID:21383057)

PMID:21383057 PMID:24691993

MGI:5292805

NCBI chr20:28,281,582...28,307,262
Ensembl chr20:28,281,596...28,303,878

X-C motif chemokine ligand 1

involved_in

(PMID:10887101)

PMID:10887101

NCBI chr13:77,248,865...77,252,308
Ensembl chr13:77,248,717...77,252,329

negative regulation of CD8-positive, alpha-beta T cell activation

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

CD274 molecule

involved_in

(PMID:28813410), (PMID:28813417)

PMID:28813410 PMID:28813417

NCBI chr 1:227,116,627...227,137,379
Ensembl chr 1:227,116,649...227,134,450

Hfe

homeostatic iron regulator

involved_in

UniProtKB:P04439 (PMID:24643698)

PMID:24643698

NCBI chr17:41,413,451...41,421,502
Ensembl chr17:41,413,451...41,421,502

negative regulation of CD8-positive, alpha-beta T cell differentiation

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Slc4a2

solute carrier family 4 member 2

involved_in
acts_upstream_of_or_within

GO_REF:0000024
(PMID:24515893)

PMID:24515893

GO_REF:0000024

NCBI chr 4:10,736,419...10,754,407
Ensembl chr 4:10,736,425...10,752,965

Socs1

suppressor of cytokine signaling 1

involved_in

GO_REF:0000107
(MGI:6140589|PMID:24880459)
GO_REF:0000024

PMID:24880459

GO_REF:0000024 GO_REF:0000107 MGI:6140589

NCBI chr10:4,882,651...4,884,342
Ensembl chr10:4,882,560...4,884,383

zinc finger and BTB domain containing 7B

involved_in

(MGI:5446998|PMID:22730529), (MGI:6140589|PMID:24880459)

PMID:22730529 PMID:24880459

MGI:5446998 MGI:6140589

NCBI chr 2:174,795,831...174,811,980
Ensembl chr 2:174,797,453...174,814,236

negative regulation of CD8-positive, alpha-beta T cell proliferation

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Slc4a2

solute carrier family 4 member 2

involved_in
acts_upstream_of_or_within

GO_REF:0000024
(PMID:24515893)

PMID:24515893

GO_REF:0000024

NCBI chr 4:10,736,419...10,754,407
Ensembl chr 4:10,736,425...10,752,965

Vsir

V-set immunoregulatory receptor

involved_in

(PMID:24691993)

PMID:24691993

NCBI chr20:28,281,582...28,307,262
Ensembl chr20:28,281,596...28,303,878

negative regulation of cell-cell adhesion

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Abl1

ABL proto-oncogene 1, non-receptor tyrosine kinase

acts_upstream_of_or_within

MGI:103178|MGI:87860 (MGI:5574138|PMID:24367707)

PMID:24367707

MGI:5574138

NCBI chr 3:14,979,853...15,083,065
Ensembl chr 3:14,979,853...15,083,065

Abl2

ABL proto-oncogene 2, non-receptor tyrosine kinase

acts_upstream_of_or_within

MGI:103178|MGI:87859 (MGI:5574138|PMID:24367707)

PMID:24367707

MGI:5574138

NCBI chr13:68,673,702...68,839,742
Ensembl chr13:68,673,722...68,839,742

B4galnt2

beta-1,4-N-acetyl-galactosaminyl transferase 2

involved_in

(PMID:16024623)

PMID:16024623

NCBI chr10:80,801,594...80,828,005
Ensembl chr10:80,802,941...80,857,700

Cdh1

cadherin 1

involved_in

(PMID:19653274)

PMID:19653274

NCBI chr19:34,492,371...34,561,775
Ensembl chr19:34,492,371...34,561,775

Epb41l5

erythrocyte membrane protein band 4.1 like 5

acts_upstream_of_or_within

MGI:3822451 (MGI:3821807|PMID:18794329)

PMID:18794329

MGI:3821807

NCBI chr13:30,673,052...30,770,213
Ensembl chr13:30,669,764...30,768,360

Gtpbp4

GTP binding protein 4

involved_in

GO_REF:0000024
(PMID:17210637)

HGNC-UCL
RGD

PMID:17210637

GO_REF:0000024

NCBI chr17:61,308,033...61,328,184
Ensembl chr17:61,308,014...61,418,009

Jag1

jagged canonical Notch ligand 1

involved_in

(PMID:11549580)
GO_REF:0000107

PMID:11549580

GO_REF:0000107

NCBI chr 3:124,406,794...124,442,220
Ensembl chr 3:124,406,794...124,442,209

Jak2

Janus kinase 2

gastrin-induced

RGD

PMID:15530849

RGD:1641930

NCBI chr 1:226,995,334...227,054,381
Ensembl chr 1:226,995,334...227,054,189

lymphoid enhancer binding factor 1

involved_in

(PMID:19653274)

PMID:19653274

NCBI chr 2:219,666,549...219,779,815
Ensembl chr 2:219,666,592...219,779,794

Muc4

mucin 4, cell surface associated

RGD

PMID:9407114

RGD:2303753

NCBI chr11:68,008,245...68,053,229

Nf2

NF2, moesin-ezrin-radixin like (MERLIN) tumor suppressor

involved_in

(PMID:17210637)

PMID:17210637

NCBI chr14:79,627,399...79,710,709
Ensembl chr14:79,627,399...79,710,667

Pik3r1

phosphoinositide-3-kinase regulatory subunit 1

gastrin-induced

RGD

PMID:15530849

RGD:1641930

NCBI chr 2:32,878,942...32,963,611
Ensembl chr 2:32,882,032...32,963,631

Podxl

podocalyxin-like

involved_in

IBA
ISO
ISS

PMID:21873635
(MGI:5285160|PMID:20395446)
GO_REF:0000024

PMID:20395446 PMID:21873635

GO_REF:0000024 MGI:5285160, RGD:13792537

NCBI chr 4:60,135,124...60,181,829
Ensembl chr 4:60,135,109...60,181,899

Ptk2

protein tyrosine kinase 2

involved_in

(PMID:21703394)

PMID:21703394

NCBI chr 7:105,126,725...105,331,848
Ensembl chr 7:105,126,728...105,331,783

Spint2

serine peptidase inhibitor, Kunitz type, 2

acts_upstream_of_or_within

(PMID:19592578)

PMID:19592578

NCBI chr 1:84,558,159...84,580,616
Ensembl chr 1:84,558,166...84,580,616

Tgfb1

transforming growth factor, beta 1

involved_in

(PMID:18593713)
GO_REF:0000024

PMID:18593713

GO_REF:0000024

NCBI chr 1:81,196,532...81,212,848
Ensembl chr 1:81,196,532...81,212,847

Tnr

tenascin R

involved_in
acts_upstream_of_or_within

GO_REF:0000107
MGI:2154583 (MGI:3629017|PMID:15034584), (MGI:3655167|PMID:16831557)

PMID:15034584 PMID:16831557

GO_REF:0000107 MGI:3629017 MGI:3655167

NCBI chr13:71,751,714...72,172,731
Ensembl chr13:72,091,585...72,167,641

Vegfa

vascular endothelial growth factor A

acts_upstream_of_or_within

MGI:87859|MGI:87860 (MGI:5574138|PMID:24367707)

PMID:24367707

MGI:5574138

NCBI chr 9:14,955,300...14,970,641
Ensembl chr 9:14,955,300...14,970,641

Wnt1

Wnt family member 1

involved_in

(PMID:17072303)

PMID:17072303

NCBI chr 7:129,938,604...129,942,651
Ensembl chr 7:129,938,604...129,942,651

negative regulation of cell-cell adhesion mediated by cadherin

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Bmp6

bone morphogenetic protein 6

involved_in

(PMID:26598555)

PMID:26598555

NCBI chr17:26,318,121...26,469,034
Ensembl chr17:26,318,569...26,470,365

Epcam

epithelial cell adhesion molecule

involved_in

(PMID:9382878)

PMID:9382878

NCBI chr 6:6,880,142...6,896,103
Ensembl chr 6:6,878,237...6,896,127

Mad2l2

mitotic arrest deficient 2 like 2

involved_in

(PMID:19443654)

PMID:24071057 PMID:21873635

PMID:19443654

NCBI chr 5:158,563,545...158,576,698
Ensembl chr 5:158,563,567...158,576,693

Nexmif

neurite extension and migration factor

involved_in

IMP
IBA

PMID:21873635

RGD
GO_Central

RGD:13442493, RGD:13792537

NCBI chr X:69,088,076...69,219,253
Ensembl chr X:69,088,076...69,112,930

Notch1

notch receptor 1

involved_in

(PMID:17984306)

PMID:17984306

NCBI chr 3:9,277,955...9,323,531
Ensembl chr 3:9,278,086...9,323,531

Notch4

notch receptor 4

involved_in

(PMID:17984306)

PMID:17984306

NCBI chr20:4,160,362...4,184,466
Ensembl chr20:4,160,445...4,184,465

Ppm1f

protein phosphatase, Mg2+/Mn2+ dependent, 1F

involved_in

(PMID:24338362)

PMID:24338362

NCBI chr11:84,064,422...84,094,410
Ensembl chr11:84,064,420...84,094,340

Rgcc

regulator of cell cycle

involved_in

(PMID:19158077), (PMID:21307346)

PMID:19158077 PMID:21307346

NCBI chr15:54,662,483...54,675,320
Ensembl chr15:54,662,483...54,681,141

Vegfa

vascular endothelial growth factor A

involved_in

(PMID:26598555)
GO_REF:0000107

PMID:26598555

GO_REF:0000107

NCBI chr 9:14,955,300...14,970,641
Ensembl chr 9:14,955,300...14,970,641

negative regulation of cell-cell adhesion mediated by integrin

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Swap70

switching B-cell complex subunit SWAP70

involved_in

(MGI:3525048|PMID:15542837)

PMID:15542837

MGI:3525048

NCBI chr 1:164,267,588...164,328,796
Ensembl chr 1:164,267,609...164,328,794

Wnk1

WNK lysine deficient protein kinase 1

involved_in

(PMID:27400149)

NCBI chr 4:153,128,334...153,253,905
Ensembl chr 4:153,128,334...153,253,905

negative regulation of cytotoxic T cell degranulation

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

CEA cell adhesion molecule 1

involved_in

(PMID:18424730)
GO_REF:0000024

PMID:18424730

GO_REF:0000024

NCBI chr 1:81,043,595...81,060,050
Ensembl chr 1:81,043,595...81,059,992

NCK associated protein 1 like

involved_in

(PMID:32647003)

PMID:32647003

NCBI chr 7:134,577,443...134,622,934
Ensembl chr 7:134,577,482...134,622,934

negative regulation of cytotoxic T cell differentiation

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

leukocyte immunoglobulin like receptor B4

involved_in

(PMID:16493035)

PMID:16493035

NCBI chr 1:69,805,020...69,810,628
Ensembl chr 1:69,805,250...69,810,660

negative regulation of erythrocyte aggregation

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

CD24 molecule

acts_upstream_of_or_within

MGI:2179996 (MGI:2179980|PMID:9028339)

PMID:9028339

MGI:2179980

NCBI chr20:47,074,353...47,079,662
Ensembl chr20:47,073,512...47,079,662

negative regulation of establishment of T cell polarity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Ripor2

RHO family interacting cell polarization regulator 2

involved_in

(PMID:23241886)
GO_REF:0000024

PMID:23241886

GO_REF:0000024

NCBI chr17:40,323,867...40,547,482
Ensembl chr17:40,323,867...40,548,092

negative regulation of heterotypic cell-cell adhesion

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Adipoq

adiponectin, C1Q and collagen domain containing

involved_in

(PMID:10604883)
GO_REF:0000024

PMID:10604883

GO_REF:0000024

NCBI chr11:77,721,912...77,735,644
Ensembl chr11:77,721,912...77,735,564

Apoa1

apolipoprotein A1

involved_in

(PMID:21571275)
GO_REF:0000107

PMID:21571275

GO_REF:0000107

NCBI chr 8:46,527,251...46,529,035
Ensembl chr 8:46,527,144...46,529,035

Il10

interleukin 10

involved_in

UniProtKB:P06804 (MGI:5796069|PMID:26808574)

PMID:26808574

MGI:5796069

NCBI chr13:42,472,625...42,477,308
Ensembl chr13:42,472,839...42,477,313

Il1rn

interleukin 1 receptor antagonist

involved_in

(PMID:2139180)

PMID:2139180

NCBI chr 3:7,111,567...7,127,451
Ensembl chr 3:7,111,550...7,127,445

Klf4

KLF transcription factor 4

involved_in

(PMID:20551324)

PMID:20551324

NCBI chr 5:70,278,843...70,283,751
Ensembl chr 5:70,278,972...70,283,602

Map2k5

mitogen activated protein kinase kinase 5

involved_in

PMID:20551324

BHF-UCL

PMID:20551324

RGD:8553940

NCBI chr 8:63,625,220...63,852,090
Ensembl chr 8:63,625,221...63,851,983

Mapk7

mitogen-activated protein kinase 7

involved_in

UniProtKB:Q62862 (PMID:20551324)
GO_REF:0000107

PMID:20551324

GO_REF:0000107

NCBI chr10:46,170,264...46,176,262
Ensembl chr10:46,170,167...46,176,267

Mbp

myelin basic protein

involved_in

(PMID:22524708)

PMID:22524708

NCBI chr18:75,855,878...75,966,404
Ensembl chr18:75,855,878...75,966,404

Mir221

microRNA 221

involved_in

(PMID:20110463)

PMID:20110463

NCBI chr X:3,429,465...3,429,573
Ensembl chr X:3,429,465...3,429,573

Myadm

myeloid-associated differentiation marker

involved_in

IBA
IEA
ISO

PMID:21873635
GO_REF:0000107
(PMID:23264465)

PMID:23264465 PMID:21873635

GO_REF:0000107, RGD:13792537

NCBI chr 1:65,864,180...65,874,701
Ensembl chr 1:65,864,173...65,874,035

Wnk1

WNK lysine deficient protein kinase 1

involved_in

(PMID:27400149)

NCBI chr 4:153,128,334...153,253,905
Ensembl chr 4:153,128,334...153,253,905

negative regulation of homotypic cell-cell adhesion

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Ccm2l

CCM2 like scaffold protein

acts_upstream_of_or_within

(MGI:5437815|PMID:22898778)

PMID:22898778

MGI:5437815

NCBI chr 3:141,533,470...141,549,136
Ensembl chr 3:141,533,511...141,549,140

Map2k1

mitogen activated protein kinase kinase 1

IEC6 cells

RGD

PMID:17183546

RGD:2292641

NCBI chr 8:64,683,449...64,754,900
Ensembl chr 8:64,683,449...64,755,147

Rdx

radixin

involved_in

(PMID:22467863)

PMID:22467863

NCBI chr 8:52,379,494...52,437,673
Ensembl chr 8:52,379,494...52,437,678

Zfp703

zinc finger protein 703

involved_in

(MGI:4940410|PMID:21317240)

PMID:21317240

MGI:4940410

NCBI chr16:65,076,507...65,080,677
Ensembl chr16:65,076,507...65,080,677

negative regulation of immature T cell proliferation

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Gnrh1

gonadotropin releasing hormone 1

RGD

PMID:11092955

RGD:9685051

NCBI chr15:41,972,482...41,976,690
Ensembl chr15:41,972,905...41,973,581
Ensembl chr15:41,972,905...41,973,581

negative regulation of immature T cell proliferation in thymus

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Bmp4

bone morphogenetic protein 4

involved_in

GO_REF:0000107
GO_REF:0000024
(PMID:12421925)

Ensembl
UniProt
RGD

PMID:12421925

GO_REF:0000024 GO_REF:0000107

NCBI chr15:19,618,538...19,633,494
Ensembl chr15:19,618,542...19,623,306

Cdkn2a

cyclin-dependent kinase inhibitor 2A

involved_in

(MGI:3615850|PMID:15964995)

PMID:15964995

MGI:3615850

NCBI chr 5:103,984,949...103,992,143
Ensembl chr 5:103,984,949...104,003,149

Clec4g

C-type lectin domain family 4, member G

acts_upstream_of_or_within

MGI:5510586 (MGI:5475030|PMID:23487419)

PMID:23487419

MGI:5475030

NCBI chr12:1,780,370...1,785,027
Ensembl chr12:1,780,371...1,784,985

Erbb2

erb-b2 receptor tyrosine kinase 2

acts_upstream_of_or_within

(MGI:3695084|PMID:16230479)

PMID:16230479

MGI:3695084

NCBI chr10:83,411,197...83,435,078
Ensembl chr10:83,411,313...83,435,078

Indian hedgehog signaling molecule

involved_in

(MGI:3836494|PMID:19109233)

NCBI chr 9:76,504,315...76,510,532
Ensembl chr 9:76,504,315...76,510,532

Tmem131l

transmembrane 131 like

involved_in

(PMID:23690469)

PMID:23690469

NCBI chr 2:169,257,659...169,391,773
Ensembl chr 2:169,258,289...169,391,711

negative regulation of leukocyte adhesion to arterial endothelial cell

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Klf4

KLF transcription factor 4

involved_in

RNAcentral:URS00003768C5_9606 (PMID:22267480)

NCBI chr 5:70,278,843...70,283,751
Ensembl chr 5:70,278,972...70,283,602

negative regulation of leukocyte adhesion to vascular endothelial cell

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Mir125a

microRNA 125a

acts_upstream_of_or_within

RNAcentral:URS000000B1C9_9606|UniProtKB:P05231 (PMID:30670152)

PMID:30670152

NCBI chr 1:58,677,626...58,677,710
Ensembl chr 1:58,677,626...58,677,710

Mir141

microRNA 141

involved_in

(PMID:26371161)

PMID:26371161

NCBI chr 4:157,523,239...157,523,332
Ensembl chr 4:157,523,239...157,523,332

Mir146a

microRNA 146a

involved_in

(PMID:25515214)

NCBI chr10:27,848,516...27,848,610
Ensembl chr10:27,848,516...27,848,610

Mir221

microRNA 221

involved_in

RNAcentral:URS00002C6949_9606 (PMID:21310411)

PMID:21310411

NCBI chr X:3,429,465...3,429,573
Ensembl chr X:3,429,465...3,429,573

Mir222

microRNA 222

involved_in

RNAcentral:URS0000170CF4_9606 (PMID:21310411)

PMID:21310411

NCBI chr X:3,428,904...3,429,006
Ensembl chr X:3,428,904...3,429,006

Mir31

microRNA 31

involved_in

(PMID:19949084)

PMID:19949084

NCBI chr 5:103,599,038...103,599,143

Mirlet7g

microRNA let-7g

involved_in

(PMID:24291274)

PMID:24291274

NCBI chr 8:106,822,293...106,822,380
Ensembl chr 8:106,822,280...106,822,388

negative regulation of leukocyte cell-cell adhesion

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Adtrp

androgen-dependent TFPI-regulating protein

involved_in

(PMID:28341552)

PMID:28341552

NCBI chr17:22,930,012...22,993,834
Ensembl chr17:22,930,740...22,993,826

Akt1

AKT serine/threonine kinase 1

involved_in

(PMID:28341552)

PMID:28341552

NCBI chr 6:131,713,716...131,735,319
Ensembl chr 6:131,713,720...131,733,921

Ass1

argininosuccinate synthase 1

involved_in

(PMID:21106532)

PMID:21106532

NCBI chr 3:14,747,355...14,796,909
Ensembl chr 3:14,747,368...14,796,903

Mia3

MIA SH3 domain ER export factor 3

involved_in

(PMID:28341552)

PMID:28341552

NCBI chr13:94,970,421...95,012,071
Ensembl chr13:94,970,424...95,011,972

Ppara

peroxisome proliferator activated receptor alpha

involved_in

(PMID:21636785)

PMID:21636785

NCBI chr 7:116,832,405...116,900,878
Ensembl chr 7:116,832,756...116,895,346

Wnk1

WNK lysine deficient protein kinase 1

involved_in

(PMID:27400149)

NCBI chr 4:153,128,334...153,253,905
Ensembl chr 4:153,128,334...153,253,905

negative regulation of leukocyte tethering or rolling

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Ccl21

C-C motif chemokine ligand 21

involved_in

(PMID:18308860)

NCBI chr 5:56,980,557...56,981,661
Ensembl chr 5:56,980,558...56,981,686

Ccl25

C-C motif chemokine ligand 25

involved_in

(PMID:18308860)

NCBI chr12:2,707,398...2,716,571
Ensembl chr12:2,707,398...2,716,554

Ccl28

C-C motif chemokine ligand 28

involved_in

(PMID:18308860)

NCBI chr 2:51,601,354...51,625,999
Ensembl chr 2:51,601,331...51,625,997

Cxcl12

C-X-C motif chemokine ligand 12

involved_in

(PMID:18308860)

NCBI chr 4:150,388,326...150,401,173
Ensembl chr 4:150,388,325...150,401,168

negative regulation of memory T cell differentiation

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Fgl2

fibrinogen-like 2

acts_upstream_of_or_within

MGI:3582343 (MGI:6188369|PMID:29341118)

PMID:29341118

MGI:6188369

NCBI chr 4:13,710,566...13,716,207
Ensembl chr 4:13,710,575...13,716,207

Ifnl1

interferon, lambda 1

involved_in

(PMID:19346497)

PMID:19346497

NCBI chr 1:83,798,651...83,800,297
Ensembl chr 1:83,798,703...83,800,235

negative regulation of NK T cell activation

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Cd300a

Cd300a molecule

involved_in

(PMID:10540326)

PMID:10540326

NCBI chr10:99,929,801...99,942,674
Ensembl chr10:99,929,801...99,942,674

negative regulation of NK T cell proliferation

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

zinc finger and BTB domain containing 7B

involved_in

(MGI:5449456|PMID:23105140)

PMID:23105140

MGI:5449456

NCBI chr 2:174,795,831...174,811,980
Ensembl chr 2:174,797,453...174,814,236

negative regulation of platelet aggregation

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Abat

4-aminobutyrate aminotransferase

RGD

PMID:12742000

RGD:10047059

NCBI chr10:6,996,688...7,092,835
Ensembl chr10:6,999,819...7,092,835

Adamts18

ADAM metallopeptidase with thrombospondin type 1 motif, 18

acts_upstream_of_or_within

(MGI:3848389|PMID:19218546)
(PMID:19218546)

PMID:19218546

MGI:3848389

NCBI chr19:41,686,951...41,840,035
Ensembl chr19:41,688,617...41,839,781

adrenoceptor beta 2

RGD

NCBI chr18:55,642,459...55,644,501
Ensembl chr18:55,502,903...55,644,512

Alox12

arachidonate 12-lipoxygenase, 12S type

involved_in

GO_REF:0000024
(MGI:1202206|PMID:9501222)

PMID:9501222

GO_REF:0000024 MGI:1202206

NCBI chr10:54,958,263...54,970,542
Ensembl chr10:54,958,271...54,970,542

C1qtnf1

C1q and TNF related 1

involved_in

(PMID:16195328)
GO_REF:0000107

PMID:16195328

GO_REF:0000107

NCBI chr10:103,660,319...103,681,662
Ensembl chr10:103,660,327...103,681,660

Cd9

CD9 molecule

involved_in

GO_REF:0000024
(PMID:18541721)

PMID:18541721

GO_REF:0000024

NCBI chr 4:158,256,328...158,289,136
Ensembl chr 4:158,256,328...158,289,222

CEA cell adhesion molecule 1

involved_in

GO_REF:0000024
(MGI:3835235|PMID:19008452)

PMID:19008452

GO_REF:0000024 MGI:3835235

NCBI chr 1:81,043,595...81,060,050
Ensembl chr 1:81,043,595...81,059,992

Fgg

fibrinogen gamma chain

RGD

PMID:22985603

RGD:11352706

NCBI chr 2:168,354,880...168,362,325
Ensembl chr 2:168,355,013...168,362,322

Prkcd

protein kinase C, delta

involved_in

GO_REF:0000024
(MGI:3813784|PMID:16940418)

PMID:16940418

GO_REF:0000024 MGI:3813784

NCBI chr16:5,769,226...5,807,214
Ensembl chr16:5,769,215...5,799,352

Prkg1

protein kinase cGMP-dependent 1

involved_in

(PMID:16990611)

PMID:16990611

NCBI chr 1:228,409,883...229,638,794
Ensembl chr 1:228,408,947...229,639,080

Ptger3

prostaglandin E receptor 3

RGD

PMID:20303752

RGD:10043327

NCBI chr 2:246,606,131...246,750,970
Ensembl chr 2:246,606,183...246,684,434

Serpine2

serpin family E member 2

involved_in

GO_REF:0000107
(MGI:4418017|PMID:19855083)

PMID:19855083

GO_REF:0000107 MGI:4418017

NCBI chr 9:81,124,746...81,188,866
Ensembl chr 9:81,124,804...81,188,826

Sh2b3

SH2B adaptor protein 3

involved_in

GO_REF:0000107
UniProtKB:P35951 (MGI:5905608|PMID:27430239)

PMID:27430239

GO_REF:0000107 MGI:5905608

NCBI chr12:34,749,849...34,753,616
Ensembl chr12:34,731,911...34,753,616

Ubash3b

ubiquitin associated and SH3 domain containing, B

acts_upstream_of_or_within

(MGI:4838721|PMID:20585042)

PMID:20585042

MGI:4838721

NCBI chr 8:41,385,419...41,532,248
Ensembl chr 8:41,388,341...41,532,201

negative regulation of positive thymic T cell selection

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Ptpn2

protein tyrosine phosphatase, non-receptor type 2

involved_in

GO_REF:0000024
(MGI:5320871|PMID:22080863)

PMID:22080863

GO_REF:0000024 MGI:5320871

NCBI chr18:61,229,012...61,294,662
Ensembl chr18:61,229,014...61,294,627

negative regulation of regulatory T cell differentiation

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

CD44 molecule (Indian blood group)

involved_in

(MGI:5688819|PMID:25065622)

PMID:25065622

MGI:5688819

NCBI chr 3:89,155,850...89,244,615
Ensembl chr 3:89,157,058...89,244,620

Ctla4

cytotoxic T-lymphocyte-associated protein 4

involved_in

PMID:21873635
(PMID:18641304)

PMID:18641304 PMID:21873635

NCBI chr 9:62,318,874...62,325,978
Ensembl chr 9:62,319,312...62,324,963

Hspb1

heat shock protein family B (small) member 1

RGD

PMID:30287503

RGD:38549580

NCBI chr12:20,794,014...20,795,675
Ensembl chr12:20,794,028...20,795,743

Irf1

interferon regulatory factor 1

involved_in

GO_REF:0000024
(MGI:3803082|PMID:18641303)

PMID:18641303

GO_REF:0000024 MGI:3803082

NCBI chr10:37,917,155...37,924,166
Ensembl chr10:37,916,670...37,924,166

Lag3

lymphocyte activating 3

involved_in

GO_REF:0000024
(MGI:3510279|PMID:15485628)

PMID:15485628

GO_REF:0000024 MGI:3510279

NCBI chr 4:157,712,665...157,722,229
Ensembl chr 4:157,712,667...157,720,404

Mdk

midkine

involved_in

(PMID:22323540)
GO_REF:0000024

PMID:22323540

GO_REF:0000024

NCBI chr 3:77,901,156...77,903,997
Ensembl chr 3:77,901,158...77,903,130

Mir21

microRNA 21

involved_in

RNAcentral:URS0000338542_9606 (PMID:22387553)

NCBI chr10:71,405,257...71,405,348
Ensembl chr10:71,405,257...71,405,348

Mir30b

microRNA 30b

involved_in

RNAcentral:URS000039ED8D_9606 (PMID:22387553)

NCBI chr 7:100,132,589...100,132,675
Ensembl chr 7:100,132,589...100,132,675

TNF superfamily member 4

involved_in

(MGI:3806904|PMID:18713990)

PMID:18713990

MGI:3806904

NCBI chr13:73,723,329...73,746,809
Ensembl chr13:73,723,329...73,746,788

Tug1

taurine up-regulated 1

RGD

PMID:30287503

RGD:38549580

NCBI chr14:78,519,894...78,526,927
Ensembl chr14:78,522,506...78,526,927

negative regulation of T cell activation

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Ctsg

cathepsin G

involved_in

(PMID:15100291)
GO_REF:0000024

PMID:15100291

GO_REF:0000024

NCBI chr15:29,930,988...29,937,353
Ensembl chr15:29,931,003...29,937,353

Dusp22

dual specificity phosphatase 22

acts_upstream_of_or_within

(MGI:5583944|PMID:24714587)

PMID:24714587

MGI:5583944

NCBI chr17:33,780,980...33,831,540
Ensembl chr17:33,780,981...33,831,321

Dusp3

dual specificity phosphatase 3

involved_in

PMID:21873635
(PMID:12447358)

PMID:12447358 PMID:21873635

NCBI chr10:86,920,014...86,933,739
Ensembl chr10:86,920,014...86,933,962

Fgl1

fibrinogen-like 1

involved_in

ISS
ISO
IBA

GO_REF:0000024
(MGI:6273588|PMID:30580966)
PMID:21873635

PMID:30580966 PMID:21873635

GO_REF:0000024 MGI:6273588, RGD:13792537

NCBI chr16:51,120,652...51,150,907
Ensembl chr16:51,120,694...51,151,093

Gimap5

GTPase, IMAP family member 5

RGD

PMID:16584774

RGD:2303771

NCBI chr 4:77,693,417...77,701,025
Ensembl chr 4:77,687,564...77,703,086

Gpnmb

glycoprotein nmb

involved_in

(PMID:19350579)

PMID:19350579

NCBI chr 4:78,010,247...78,031,491
Ensembl chr 4:78,010,197...78,049,367

Il4

interleukin 4

acts_upstream_of_or_within

(MGI:3823129|PMID:18997793)

PMID:18997793

MGI:3823129

NCBI chr10:37,771,203...37,776,750
Ensembl chr10:37,771,203...37,776,750

Il4i1

interleukin 4 induced 1

involved_in

(PMID:28891065)

PMID:28891065

NCBI chr 1:95,299,457...95,324,564
Ensembl chr 1:95,295,601...95,324,562

Ildr2

immunoglobulin-like domain containing receptor 2

involved_in

(PMID:29431694)
(MGI:6121682|PMID:29431694)

PMID:29431694

MGI:6121682

NCBI chr13:78,518,770...78,580,627
Ensembl chr13:78,518,802...78,576,924

Jak3

Janus kinase 3

involved_in

GO_REF:0000024
(MGI:3655405|PMID:9498750)

PMID:9498750

GO_REF:0000024 MGI:3655405

NCBI chr16:18,386,330...18,398,542
Ensembl chr16:18,386,405...18,398,536

Lag3

lymphocyte activating 3

acts_upstream_of_or_within
involved_in

(MGI:2429474|PMID:12421911)
(MGI:2385414|PMID:12209638), (MGI:6273588|PMID:30580966)

PMID:12209638 PMID:12421911 PMID:30580966

MGI:2385414 MGI:2429474 MGI:6273588

NCBI chr 4:157,712,665...157,722,229
Ensembl chr 4:157,712,667...157,720,404

Laptm5

lysosomal protein transmembrane 5

involved_in

(MGI:3803048|PMID:18619870)

PMID:18619870

MGI:3803048

NCBI chr 5:143,087,759...143,109,807
Ensembl chr 5:143,087,759...143,109,807

Lax1

lymphocyte transmembrane adaptor 1

involved_in

(PMID:12359715)
PMID:21873635

PMID:12359715 PMID:21873635

NCBI chr13:45,134,825...45,145,381
Ensembl chr13:45,134,834...45,145,381

Mir181c

microRNA 181c

acts_upstream_of

(PMID:21112091)

PMID:21112091

NCBI chr19:23,983,523...23,983,628
Ensembl chr19:23,983,523...23,983,628

Mir27a

microRNA 27a

involved_in

(PMID:24725595)

PMID:12612075 PMID:21873635

PMID:24725595

NCBI chr19:23,954,831...23,954,917
Ensembl chr19:23,954,831...23,954,917

Pag1

phosphoprotein membrane anchor with glycosphingolipid microdomains 1

involved_in

IBA
IEA
ISO

PMID:21873635
GO_REF:0000002
(MGI:3687921|PMID:12612075)

InterPro
RGD

GO_REF:0000002 MGI:3687921, RGD:13792537

NCBI chr 2:91,935,378...92,076,937
Ensembl chr 2:92,057,216...92,069,849

Peli1

pellino E3 ubiquitin protein ligase 1

acts_upstream_of_or_within

MGI:4361448 (MGI:5291872|PMID:21874024)

PMID:21874024

MGI:5291872

NCBI chr14:95,254,274...95,309,168
Ensembl chr14:95,254,589...95,308,285

Pla2g2d

phospholipase A2, group IID

acts_upstream_of_or_within

(MGI:3851856|PMID:19564598)

PMID:19564598

MGI:3851856

NCBI chr 5:151,016,010...151,022,531
Ensembl chr 5:151,018,870...151,022,525

Ptpn22

protein tyrosine phosphatase, non-receptor type 22

involved_in

ISS
ISO
IBA

GO_REF:0000024
(MGI:4946183|PMID:21044313)
PMID:21873635
(PMID:18299186)

PMID:18299186 PMID:21044313 PMID:21873635

GO_REF:0000024 MGI:4946183, RGD:13792537

NCBI chr 2:191,366,761...191,414,782
Ensembl chr 2:191,366,808...191,414,779

Socs6

suppressor of cytokine signaling 6

acts_upstream_of_or_within

(MGI:4838967|PMID:20007709)

PMID:20007709

MGI:4838967

NCBI chr18:82,111,866...82,139,193
Ensembl chr18:82,111,827...82,139,219

Spn

sialophorin

acts_upstream_of_or_within

MGI:1857246 (MGI:3029937|PMID:9645617)

PMID:9645617

MGI:3029937

NCBI chr 1:181,746,937...181,759,564
Ensembl chr 1:181,746,429...181,759,628

Tgfb1

transforming growth factor, beta 1

acts_upstream_of_or_within

MGI:1857258 (MGI:3641518|PMID:12646629)

PMID:12646629

MGI:3641518

NCBI chr 1:81,196,532...81,212,848
Ensembl chr 1:81,196,532...81,212,847

Tigit

T cell immunoreceptor with Ig and ITIM domains

involved_in
acts_upstream_of_or_within

PMID:21873635
(PMID:19011627)
MGI:4939784 (MGI:4939285|PMID:21199897)

PMID:19011627 PMID:21199897 PMID:21873635

MGI:4939285, RGD:13792537

NCBI chr11:57,029,024...57,046,627
Ensembl chr11:57,029,118...57,045,994

Tnfaip8l2

TNF alpha induced protein 8 like 2

involved_in
acts_upstream_of_or_within

PMID:21873635
(MGI:5295125|PMID:21963221)

PMID:21963221 PMID:21873635

MGI:5295125, RGD:13792537

NCBI chr 2:182,710,433...182,726,724
Ensembl chr 2:182,709,378...182,726,760

Vtcn1

V-set domain containing T cell activation inhibitor 1

involved_in
acts_upstream_of_or_within

(PMID:16606666)
(MGI:3521625|PMID:15585831)

PMID:15585831 PMID:16606666

MGI:3521625

NCBI chr 2:188,253,594...188,321,658
Ensembl chr 2:188,253,594...188,321,658

negative regulation of T cell activation via T cell receptor contact with antigen bound to MHC molecule on antigen presenting cell

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Havcr2

hepatitis A virus cellular receptor 2

involved_in

(PMID:26492563)

PMID:26492563

NCBI chr10:30,882,484...30,914,018
Ensembl chr10:30,882,606...30,909,137

Lgals3

galectin 3

involved_in

(MGI:4355752|PMID:19706535)

PMID:19706535

MGI:4355752

NCBI chr15:20,620,083...20,632,019
Ensembl chr15:20,607,692...20,632,025

negative regulation of T cell costimulation

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Lilrb2

leukocyte immunoglobulin like receptor B2

involved_in

(PMID:17163451)

PMID:17163451

NCBI chr 1:65,326,832...65,334,683
Ensembl chr 1:65,326,832...65,334,679

leukocyte immunoglobulin like receptor B4

involved_in

(PMID:17163451)

PMID:17163451

NCBI chr 1:69,805,020...69,810,628
Ensembl chr 1:69,805,250...69,810,660

negative regulation of T cell differentiation

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Cd74

CD74 molecule

acts_upstream_of_or_within

MGI:1927205 (MGI:52620|PMID:7679955)

PMID:7679955

MGI:52620

NCBI chr18:54,256,757...54,266,003
Ensembl chr18:54,256,778...54,266,003

Cyld

CYLD lysine 63 deubiquitinase

acts_upstream_of_or_within

(MGI:5449492|PMID:23066153)

PMID:23066153

MGI:5449492

NCBI chr19:18,310,632...18,373,696
Ensembl chr19:18,314,019...18,373,658

Dtx1

deltex E3 ubiquitin ligase 1

acts_upstream_of_or_within

(MGI:2663321|PMID:12794108)

PMID:12794108

MGI:2663321

NCBI chr12:35,849,647...35,880,835
Ensembl chr12:35,849,617...35,880,838

Ifnb1

interferon beta 1

involved_in

(PMID:20554961)

PMID:20554961

NCBI chr 5:103,020,969...103,021,523
Ensembl chr 5:103,020,969...103,021,523

Ifnl1

interferon, lambda 1

involved_in

(PMID:19346497)

PMID:19346497

NCBI chr 1:83,798,651...83,800,297
Ensembl chr 1:83,798,703...83,800,235

Nrarp

Notch-regulated ankyrin repeat protein

acts_upstream_of_or_within

(MGI:2663321|PMID:12794108)

PMID:12794108

MGI:2663321

NCBI chr 3:7,992,582...7,995,136
Ensembl chr 3:7,992,552...7,995,133

Prdx2

peroxiredoxin 2

involved_in
acts_upstream_of_or_within

GO_REF:0000107
MGI:2668456 (MGI:3796974|PMID:16290204)

PMID:16290204

GO_REF:0000107 MGI:3796974

NCBI chr19:23,180,927...23,186,217
Ensembl chr19:23,180,930...23,186,194

negative regulation of T cell differentiation in thymus

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Bmp4

bone morphogenetic protein 4

involved_in

(PMID:12421925)

PMID:12421925

NCBI chr15:19,618,538...19,633,494
Ensembl chr15:19,618,542...19,623,306

Foxj1

forkhead box J1

involved_in

(MGI:3713603|PMID:16339515)

PMID:16339515

MGI:3713603

NCBI chr10:101,566,299...101,570,249
Ensembl chr10:101,566,304...101,570,237

Indian hedgehog signaling molecule

involved_in

(MGI:3836494|PMID:19109233)

NCBI chr 9:76,504,315...76,510,532
Ensembl chr 9:76,504,315...76,510,532

Nfkbid

NFKB inhibitor delta

acts_upstream_of_or_within

(MGI:2177878|PMID:11931770)

PMID:11931770

MGI:2177878

NCBI chr 1:85,679,353...85,690,415
Ensembl chr 1:85,680,861...85,690,447

Rag2

recombination activating 2

RGD

PMID:30206106

RGD:38508903

NCBI chr 3:87,902,373...87,910,227
Ensembl chr 3:87,902,238...87,911,066

sonic hedgehog signaling molecule

acts_upstream_of_or_within
involved_in

(MGI:1888832|PMID:10981962)
GO_REF:0000107

PMID:10981962

GO_REF:0000107 MGI:1888832

NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170

Zc3h8

zinc finger CCCH type containing 8

involved_in

(PMID:12153508)

PMID:12153508

NCBI chr 3:116,176,779...116,193,752
Ensembl chr 3:116,176,798...116,193,787

negative regulation of T cell homeostatic proliferation

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

CD24 molecule

acts_upstream_of_or_within

MGI:2179996 (MGI:3721471|PMID:16769998)

PMID:16769998

MGI:3721471

NCBI chr20:47,074,353...47,079,662
Ensembl chr20:47,073,512...47,079,662

negative regulation of T cell proliferation

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Arg1

arginase 1

involved_in

(PMID:16709924)

PMID:16709924

NCBI chr 1:20,475,878...20,488,422
Ensembl chr 1:20,475,968...20,488,422

Btla

B and T lymphocyte associated

acts_upstream_of_or_within

MGI:3027713 (MGI:2665193|PMID:12796776)

PMID:12796776

MGI:2665193

NCBI chr11:55,563,683...55,588,187
Ensembl chr11:55,564,899...55,587,181

CD274 molecule

involved_in
acts_upstream_of_or_within

PMID:21873635
(MGI:3689239|PMID:17016562)

PMID:17016562 PMID:21873635

MGI:3689239, RGD:13792537

NCBI chr 1:227,116,627...227,137,379
Ensembl chr 1:227,116,649...227,134,450

Cd276

Cd276 molecule

acts_upstream_of_or_within

MGI:3033707 (MGI:2671029|PMID:12925852)

PMID:12925852

MGI:2671029

NCBI chr 8:58,937,751...58,968,082
Ensembl chr 8:58,937,751...58,968,380

Cd37

CD37 molecule

acts_upstream_of_or_within

MGI:1350360 (MGI:4830018|PMID:20709950)

PMID:20709950

MGI:4830018

NCBI chr 1:95,719,171...95,724,662
Ensembl chr 1:95,719,190...95,724,648

Cd80

Cd80 molecule

involved_in

PMID:21873635

GO_Central

NCBI chr11:62,254,543...62,293,414
Ensembl chr11:62,254,624...62,292,030

Cd86

CD86 molecule

involved_in

PMID:21873635

GO_Central

NCBI chr11:64,142,193...64,200,816
Ensembl chr11:64,163,828...64,200,818

CEA cell adhesion molecule 1

acts_upstream_of_or_within

(MGI:3693042|PMID:17081782)
MGI:3695215 (MGI:3693042|PMID:17081782), (MGI:5451119|PMID:23123061)

PMID:17081782 PMID:23123061

MGI:3693042 MGI:5451119

NCBI chr 1:81,043,595...81,060,050
Ensembl chr 1:81,043,595...81,059,992

Cebpb

CCAAT/enhancer binding protein beta

involved_in

GO_REF:0000024
(MGI:3773092|PMID:16585579)

PMID:16585579

GO_REF:0000024 MGI:3773092

NCBI chr 3:156,398,035...156,399,466
Ensembl chr 3:156,397,052...156,399,473

Clec4g

C-type lectin domain family 4, member G

acts_upstream_of_or_within

MGI:5510586 (MGI:5475030|PMID:23487419), (MGI:5510582|PMID:19632227)
(MGI:5510582|PMID:19632227)

PMID:19632227 PMID:23487419

MGI:5475030 MGI:5510582

NCBI chr12:1,780,370...1,785,027
Ensembl chr12:1,780,371...1,784,985

Ctla4

cytotoxic T-lymphocyte-associated protein 4

RGD

PMID:15849541

RGD:2302005

NCBI chr 9:62,318,874...62,325,978
Ensembl chr 9:62,319,312...62,324,963

Dlg1

discs large MAGUK scaffold protein 1

involved_in
acts_upstream_of_or_within

GO_REF:0000107
MGI:3699270 (MGI:3768613|PMID:17724087)

PMID:17724087

GO_REF:0000107 MGI:3768613

NCBI chr11:68,911,883...69,103,230
Ensembl chr11:68,911,883...69,102,689

Dlg5

discs large MAGUK scaffold protein 5

involved_in

(PMID:28169360)

PMID:28169360

NCBI chr15:75,786...209,735
Ensembl chr15:75,786...187,837

Foxj1

forkhead box J1

involved_in

(MGI:3043440|PMID:14963332)

PMID:14963332

MGI:3043440

NCBI chr10:101,566,299...101,570,249
Ensembl chr10:101,566,304...101,570,237

forkhead box P3

involved_in
acts_upstream_of_or_within

MGI:3607665 MGI:3692513 MGI:3693968 MGI:3697020

PMID:15466453 PMID:16203996 PMID:16769892 PMID:16945588 PMID:17028180 More...

NCBI chr X:14,908,494...14,924,994
Ensembl chr X:14,908,494...14,923,838

Glmn

glomulin, FKBP associated protein

involved_in

(PMID:12604780)

PMID:12604780

NCBI chr14:2,187,144...2,231,295
Ensembl chr14:2,187,642...2,230,420

Gpnmb

glycoprotein nmb

involved_in

(PMID:19350579)

PMID:19350579

NCBI chr 4:78,010,247...78,031,491
Ensembl chr 4:78,010,197...78,049,367

Havcr2

hepatitis A virus cellular receptor 2

involved_in

(MGI:2679123|PMID:14556006)

PMID:14556006

MGI:2679123

NCBI chr10:30,882,484...30,914,018
Ensembl chr10:30,882,606...30,909,137

Ido1

indoleamine 2,3-dioxygenase 1

acts_upstream_of_or_within

MGI:3505776 (MGI:3776720|PMID:18077788)

PMID:18077788

MGI:3776720

NCBI chr16:67,430,684...67,442,459
Ensembl chr16:67,430,578...67,442,730

Il20rb

interleukin 20 receptor subunit beta

acts_upstream_of_or_within

MGI:3830304 (MGI:3827040|PMID:19124723)

PMID:19124723

MGI:3827040

NCBI chr 8:100,979,085...101,010,829
Ensembl chr 8:100,980,383...101,009,942

Il2ra

interleukin 2 receptor subunit alpha

acts_upstream_of_or_within

MGI:1857192 (MGI:2670301|PMID:12702495)

PMID:12702495

MGI:2670301

NCBI chr17:66,849,974...66,898,665
Ensembl chr17:66,849,974...66,898,697

Il4i1

interleukin 4 induced 1

involved_in

(PMID:17356132)

PMID:17356132

NCBI chr 1:95,299,457...95,324,564
Ensembl chr 1:95,295,601...95,324,562

Kng2

kininogen 2

unstimulated Jurkat cells; ConA- or PHA-stimulated, but not IL-2 stimulated, Jurkat cells

RGD

PMID:16140359

RGD:1600541

NCBI chr11:77,913,876...77,936,247
Ensembl chr11:77,909,612...78,002,971

Lilrb2

leukocyte immunoglobulin like receptor B2

involved_in

(PMID:14971032), (PMID:17163451), (PMID:19124746), (PMID:20702625)

PMID:14971032 PMID:17163451 PMID:19124746 PMID:20702625

NCBI chr 1:65,326,832...65,334,683
Ensembl chr 1:65,326,832...65,334,679

leukocyte immunoglobulin like receptor B4

involved_in

(PMID:17163451)

PMID:17163451

NCBI chr 1:69,805,020...69,810,628
Ensembl chr 1:69,805,250...69,810,660

Mad1l1

mitotic arrest deficient 1 like 1

acts_upstream_of_or_within

(MGI:1932181|PMID:11313860)

PMID:11313860

MGI:1932181

NCBI chr12:14,320,892...14,630,750
Ensembl chr12:14,320,892...14,630,703

Marchf7

membrane associated ring-CH-type finger 7

acts_upstream_of_or_within

MGI:3530008 (MGI:3529633|PMID:15670816)

PMID:15670816

MGI:3529633

NCBI chr 3:44,680,229...44,720,172
Ensembl chr 3:44,681,632...44,720,168

Ndfip1

Nedd4 family interacting protein 1

acts_upstream_of_or_within

MGI:3695433 (MGI:3694584|PMID:17137798)

PMID:17137798

MGI:3694584

NCBI chr18:30,265,808...30,316,068
Ensembl chr18:30,250,613...30,322,311

Pawr

pro-apoptotic WT1 regulator

acts_upstream_of_or_within

MGI:2678021 (MGI:2675524|PMID:12970181)

PMID:12970181

MGI:2675524

NCBI chr 7:43,645,028...43,725,033
Ensembl chr 7:43,645,084...43,725,028

Pdcd1lg2

programmed cell death 1 ligand 2

involved_in
acts_upstream_of_or_within

PMID:21873635
(MGI:1931613|PMID:11224527), (MGI:3689239|PMID:17016562)

PMID:11224527 PMID:17016562 PMID:21873635

MGI:1931613 MGI:3689239, RGD:13792537

NCBI chr 1:227,158,941...227,223,938
Ensembl chr 1:227,158,941...227,223,938

Pde5a

phosphodiesterase 5A

acts_upstream_of_or_within

(MGI:3722008|PMID:17101732)

PMID:17101732

MGI:3722008

NCBI chr 2:210,858,515...211,003,480
Ensembl chr 2:210,858,063...210,999,701

Peli1

pellino E3 ubiquitin protein ligase 1

acts_upstream_of_or_within

MGI:4361448 (MGI:5291872|PMID:21874024)

PMID:21874024

MGI:5291872

NCBI chr14:95,254,274...95,309,168
Ensembl chr14:95,254,589...95,308,285

Pla2g2a

phospholipase A2 group IIA

NOT|acts_upstream_of_or_within

(MGI:3851856|PMID:19564598)

PMID:19564598

MGI:3851856

NCBI chr 5:151,076,442...151,079,019
Ensembl chr 5:151,076,442...151,079,014

Pla2g2d

phospholipase A2, group IID

acts_upstream_of_or_within
involved_in

(MGI:3851856|PMID:19564598)
PMID:21873635

PMID:19564598 PMID:21873635

MGI:3851856, RGD:13792537

NCBI chr 5:151,016,010...151,022,531
Ensembl chr 5:151,018,870...151,022,525

Pla2g2f

phospholipase A2, group IIF

involved_in
acts_upstream_of_or_within

PMID:21873635
(MGI:3695953|PMID:16931517)

PMID:16931517 PMID:21873635

MGI:3695953, RGD:13792537

NCBI chr 5:150,986,788...150,993,175
Ensembl chr 5:150,986,788...150,993,175

Pten

phosphatase and tensin homolog

acts_upstream_of_or_within

MGI:1857936 (MGI:3586939|PMID:16027169)

PMID:16027169

MGI:3586939

NCBI chr 1:230,631,303...230,696,754
Ensembl chr 1:230,630,338...230,696,838

Ptpn6

protein tyrosine phosphatase, non-receptor type 6

involved_in
acts_upstream_of_or_within

GO_REF:0000107
MGI:1856073|MGI:1856074 (MGI:82729|PMID:9064344)

PMID:9064344

GO_REF:0000107 MGI:82729

NCBI chr 4:157,526,034...157,550,783
Ensembl chr 4:157,526,035...157,550,984

Ripor2

RHO family interacting cell polarization regulator 2

involved_in

(PMID:27556504)

PMID:27556504

NCBI chr17:40,323,867...40,547,482
Ensembl chr17:40,323,867...40,548,092

RT1-Ba

RT1 class II, locus Ba

RGD

PMID:9834080

RGD:5147666

NCBI chr20:4,575,134...4,579,727
Ensembl chr20:4,575,134...4,579,744

RT1-Bb

RT1 class II, locus Bb

RGD

PMID:9834080

RGD:5147666

NCBI chr20:4,596,558...4,602,201
Ensembl chr20:4,596,559...4,607,597

RT1 class II, locus Db1

involved_in

(PMID:15795121)

PMID:15795121

NCBI chr20:4,548,664...4,558,237
Ensembl chr20:4,548,666...4,558,258

RT1-M3-1

RT1 class Ib, locus M3, gene 1

involved_in

(PMID:20702625)

PMID:20702625

NCBI chr20:1,323,976...1,328,126
Ensembl chr20:1,287,521...1,328,117

Scgb1a1

secretoglobin family 1A member 1

acts_upstream_of_or_within

(MGI:3615741|PMID:15356574)

PMID:15356574

MGI:3615741

NCBI chr 1:205,977,060...205,980,610
Ensembl chr 1:205,977,060...205,980,610

Sdc4

syndecan 4

involved_in

(PMID:19350579)

PMID:19350579

NCBI chr 3:153,154,888...153,173,576
Ensembl chr 3:153,154,896...153,173,580

surfactant protein D

RGD

NCBI chr16:17,046,491...17,058,968
Ensembl chr16:17,046,483...17,059,927

sonic hedgehog signaling molecule

involved_in
acts_upstream_of_or_within

GO_REF:0000107
(MGI:1888832|PMID:10981962)

PMID:10981962

GO_REF:0000107 MGI:1888832

NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170

Spn

sialophorin

involved_in
acts_upstream_of_or_within

GO_REF:0000024
MGI:1857246 (MGI:3029937|PMID:9645617), (MGI:3510556|PMID:15117976), (MGI:76803|PMID:7566153)
(MGI:3847636|PMID:17638845)

PMID:7566153 PMID:9645617 PMID:15117976 PMID:17638845

GO_REF:0000024 MGI:3029937 MGI:3510556 MGI:3847636 MGI:76803

NCBI chr 1:181,746,937...181,759,564
Ensembl chr 1:181,746,429...181,759,628

Tgfb1

transforming growth factor, beta 1

acts_upstream_of_or_within

MGI:3719583 (MGI:3718815|PMID:17481928)

PMID:17481928

MGI:3718815

NCBI chr 1:81,196,532...81,212,848
Ensembl chr 1:81,196,532...81,212,847

Tnfrsf21

TNF receptor superfamily member 21

involved_in

ISS
ISO
IBA

GO_REF:0000024
(MGI:2137821|PMID:11485735)
PMID:21873635

PMID:11485735 PMID:21873635

GO_REF:0000024 MGI:2137821, RGD:13792537

NCBI chr 9:17,879,156...17,954,085
Ensembl chr 9:17,879,156...17,954,085

Tsc2

TSC complex subunit 2

acts_upstream_of_or_within

MGI:109583 (MGI:3586939|PMID:16027169)

PMID:16027169

MGI:3586939

NCBI chr10:13,621,135...13,655,773
Ensembl chr10:13,621,136...13,655,951

Tspan32

tetraspanin 32

acts_upstream_of_or_within

MGI:88330 (MGI:4830018|PMID:20709950)

PMID:20709950

MGI:4830018

NCBI chr 1:198,190,128...198,204,447
Ensembl chr 1:198,190,164...198,204,445

Vsig4

V-set and immunoglobulin domain containing 4

involved_in
acts_upstream_of_or_within

PMID:21873635
(MGI:3689239|PMID:17016562)

PMID:17016562 PMID:21873635

MGI:3689239, RGD:13792537

NCBI chr X:61,144,926...61,170,212
Ensembl chr X:61,144,928...61,170,212

Vtcn1

V-set domain containing T cell activation inhibitor 1

involved_in

(PMID:16606666)

PMID:16606666

NCBI chr 2:188,253,594...188,321,658
Ensembl chr 2:188,253,594...188,321,658

Zc3h12d

zinc finger CCCH type containing 12D

acts_upstream_of_or_within

MGI:5588370 (MGI:5567042|PMID:24415781)

PMID:24415781

MGI:5567042

NCBI chr 1:2,313,110...2,348,820
Ensembl chr 1:2,314,324...2,348,819

negative regulation of T-helper 1 cell activation

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

X-C motif chemokine ligand 1

involved_in

(PMID:10887101)

PMID:10887101

NCBI chr13:77,248,865...77,252,308
Ensembl chr13:77,248,717...77,252,329

negative regulation of T-helper 1 cell differentiation

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Il4r

interleukin 4 receptor

acts_upstream_of_or_within

MGI:96109 (MGI:3761239|PMID:16424184)

PMID:16424184

MGI:3761239

NCBI chr 1:180,115,061...180,139,981
Ensembl chr 1:180,115,120...180,139,980

Jak3

Janus kinase 3

involved_in

GO_REF:0000024
(MGI:3719947|PMID:16020505)

PMID:16020505

GO_REF:0000024 MGI:3719947

NCBI chr16:18,386,330...18,398,542
Ensembl chr16:18,386,405...18,398,536

TNF superfamily member 4

involved_in

(MGI:4942267|PMID:9670042)

PMID:9670042

MGI:4942267

NCBI chr13:73,723,329...73,746,809
Ensembl chr13:73,723,329...73,746,788

negative regulation of T-helper 17 cell differentiation

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

forkhead box P3

involved_in

(PMID:23169781)

PMID:23169781

NCBI chr X:14,908,494...14,924,994
Ensembl chr X:14,908,494...14,923,838

Il2

interleukin 2

involved_in

RNAcentral:URS000039ED8D_10090 (MGI:5634593|PMID:25642768)

PMID:25642768

MGI:5634593

NCBI chr 2:120,004,862...120,009,566
Ensembl chr 2:120,004,862...120,009,566

Il4

interleukin 4

involved_in
acts_upstream_of_or_within

PMID:21873635
(MGI:3817792|PMID:18792410)

PMID:18792410 PMID:21873635

MGI:3817792, RGD:13792537

NCBI chr10:37,771,203...37,776,750
Ensembl chr10:37,771,203...37,776,750

Rc3h1

ring finger and CCCH-type domains 1

involved_in

(MGI:6142401|PMID:25282160)

PMID:25282160

MGI:6142401

NCBI chr13:73,174,075...73,245,762
Ensembl chr13:73,173,946...73,238,839

Rc3h2

ring finger and CCCH-type domains 2

involved_in

(MGI:6142401|PMID:25282160)

PMID:25282160

MGI:6142401

NCBI chr 3:21,121,531...21,186,711
Ensembl chr 3:21,110,679...21,179,933

Smad7

SMAD family member 7

involved_in

GO_REF:0000107
(MGI:5634593|PMID:25642768)

PMID:25642768

GO_REF:0000107 MGI:5634593

NCBI chr18:68,988,429...69,016,774
Ensembl chr18:68,988,429...69,016,765

Tbx21

T-box transcription factor 21

involved_in

(MGI:4868293|PMID:21151104)

PMID:21151104

MGI:4868293

NCBI chr10:82,082,322...82,098,831
Ensembl chr10:82,082,322...82,098,831

zinc finger and BTB domain containing 7B

acts_upstream_of_or_within

MGI:3530739 (MGI:5450776|PMID:23034280)

PMID:23034280

MGI:5450776

NCBI chr 2:174,795,831...174,811,980
Ensembl chr 2:174,797,453...174,814,236

Zc3h12a

zinc finger CCCH type containing 12A

involved_in

GO_REF:0000024
(MGI:6142401|PMID:25282160)

PMID:25282160

GO_REF:0000024 MGI:6142401

NCBI chr 5:137,376,562...137,385,351
Ensembl chr 5:137,376,564...137,385,351

negative regulation of T-helper 17 cell lineage commitment

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Loxl3

lysyl oxidase-like 3

involved_in

(MGI:5825383|PMID:28065600)

PMID:28065600

MGI:5825383

NCBI chr 4:115,540,640...115,556,958
Ensembl chr 4:115,540,685...115,557,466

Tbx21

T-box transcription factor 21

involved_in

(MGI:4868293|PMID:21151104)

PMID:21151104

MGI:4868293

NCBI chr10:82,082,322...82,098,831
Ensembl chr10:82,082,322...82,098,831

Tnfsf18

TNF superfamily member 18

involved_in

(MGI:5551556|PMID:24107315)

PMID:24107315

MGI:5551556

NCBI chr13:73,833,478...73,907,249
Ensembl chr13:73,831,252...73,843,169

negative regulation of T-helper 2 cell differentiation

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Anxa1

annexin A1

involved_in

ISS
IBA
ISO

GO_REF:0000024
PMID:21873635
(PMID:17008549)

PMID:17008549 PMID:21873635

GO_REF:0000024, RGD:13792537

NCBI chr 1:217,861,175...217,877,205
Ensembl chr 1:217,861,175...217,877,343

Bcl6

BCL6, transcription repressor

acts_upstream_of_or_within

MGI:96559 (MGI:2450484|PMID:12594267)

PMID:12594267

MGI:2450484

NCBI chr11:76,854,090...76,877,389
Ensembl chr11:76,854,090...76,877,389

Hlx

H2.0-like homeobox

acts_upstream_of_or_within

MGI:105367|MGI:2182089 (MGI:3761239|PMID:16424184)

PMID:16424184

MGI:3761239

NCBI chr13:96,280,335...96,285,750
Ensembl chr13:96,280,339...96,285,750

Socs5

suppressor of cytokine signaling 5

involved_in

(MGI:3687909|PMID:12242343)

PMID:12242343

MGI:3687909

NCBI chr 6:7,481,039...7,512,644
Ensembl chr 6:7,481,095...7,514,834

Zfp35

zinc finger protein 35

acts_upstream_of_or_within

MGI:4398896 (MGI:4366385|PMID:19783676)

PMID:19783676

MGI:4366385

NCBI chr18:15,268,852...15,284,334
Ensembl chr18:15,268,814...15,285,088

negative regulation of T-helper cell differentiation

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Rc3h1

ring finger and CCCH-type domains 1

acts_upstream_of_or_within

MGI:3581675 (MGI:3580753|PMID:15917799)

PMID:15917799

MGI:3580753

NCBI chr13:73,174,075...73,245,762
Ensembl chr13:73,173,946...73,238,839

neural crest cell delamination

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Specc1l

sperm antigen with calponin homology and coiled-coil domains 1-like

acts_upstream_of_or_within

MGI:4124253|MGI:4128888 (MGI:6101898|PMID:26787558)

PMID:26787558

MGI:6101898

NCBI chr20:13,337,983...13,443,665
Ensembl chr20:13,339,692...13,443,665

neuroblast delamination

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Akna

AT-hook transcription factor

involved_in

(MGI:6294240|PMID:30787442)
PMID:21873635

PMID:30787442 PMID:21873635

MGI:6294240, RGD:13792537

NCBI chr 5:76,777,415...76,824,380
Ensembl chr 5:76,777,415...76,816,017

positive regulation of activated T cell proliferation

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Ager

advanced glycosylation end product-specific receptor

involved_in

(PMID:15944249)

PMID:15944249

NCBI chr20:4,148,150...4,151,361
Ensembl chr20:4,147,890...4,151,078

CD24 molecule

involved_in

(PMID:11272271)
GO_REF:0000024

PMID:11272271 PMID:11272271

GO_REF:0000024, RGD:8554145

NCBI chr20:47,074,353...47,079,662
Ensembl chr20:47,073,512...47,079,662

CD86 molecule

RGD

NCBI chr11:64,142,193...64,200,816
Ensembl chr11:64,163,828...64,200,818

erythropoietin

RGD

NCBI chr12:19,204,258...19,207,948
Ensembl chr12:19,204,508...19,207,946

Fadd

Fas associated via death domain

involved_in

GO_REF:0000024
(MGI:5291865|PMID:21876153)

PMID:21876153

GO_REF:0000024 MGI:5291865

NCBI chr 1:199,743,200...199,745,746
Ensembl chr 1:199,739,994...199,745,653

Gpam

glycerol-3-phosphate acyltransferase, mitochondrial

involved_in
acts_upstream_of_or_within

GO_REF:0000107
MGI:2669956 (MGI:3826295|PMID:18971390)

PMID:18971390

GO_REF:0000107 MGI:3826295

NCBI chr 1:254,106,323...254,170,755
Ensembl chr 1:254,106,331...254,142,639

Hhla2

HERV-H LTR-associating 2

involved_in

(PMID:23784006)

PMID:23784006

NCBI chr11:51,257,681...51,271,408

Hmgb1

high mobility group box 1

involved_in

(PMID:15944249)

PMID:15944249

NCBI chr12:5,973,062...5,978,565
Ensembl chr12:5,901,586...5,978,565

Igf1

insulin-like growth factor 1

involved_in

(PMID:15694994)
GO_REF:0000107

PMID:15694994

GO_REF:0000107

NCBI chr 7:22,282,895...22,361,972
Ensembl chr 7:22,282,930...22,359,296

Igf2

insulin-like growth factor 2

involved_in

(PMID:15694994)
PMID:21873635

PMID:15694994 PMID:21873635

NCBI chr 1:197,814,409...197,831,802
Ensembl chr 1:197,814,410...197,823,018

Igfbp2

insulin-like growth factor binding protein 2

involved_in

(PMID:15694994)
GO_REF:0000024

PMID:15694994

GO_REF:0000024

NCBI chr 9:74,415,574...74,442,945
Ensembl chr 9:74,415,546...74,442,937

Il12b

interleukin 12B

involved_in

(PMID:11114383), (PMID:1674604)

PMID:1674604 PMID:11114383

NCBI chr10:28,888,832...28,903,796
Ensembl chr10:28,893,008...28,902,903

Il12rb1

interleukin 12 receptor subunit beta 1

involved_in

(PMID:11114383)
PMID:21873635

PMID:11114383 PMID:21873635

NCBI chr16:18,620,228...18,633,207
Ensembl chr16:18,620,770...18,632,769

Il18

interleukin 18

involved_in

GO_REF:0000107
PMID:8766574
(PMID:8766574)

PMID:8766574 PMID:8766574

GO_REF:0000107, RGD:8554620

NCBI chr 8:50,904,630...50,932,887
Ensembl chr 8:50,906,960...50,932,887

Il2

interleukin 2

acts_upstream_of_or_within

MGI:1857191 (MGI:1889048|PMID:7584142), (MGI:3577956|PMID:10485657), (MGI:87443|PMID:1830926)
(PMID:10072077), (PMID:1830926)

PMID:1830926 PMID:7584142 PMID:10072077 PMID:10485657

MGI:1889048 MGI:3577956 MGI:87443

NCBI chr 2:120,004,862...120,009,566
Ensembl chr 2:120,004,862...120,009,566

Il23a

interleukin 23 subunit alpha

involved_in

(PMID:11114383)

PMID:11114383

NCBI chr 7:721,809...723,923
Ensembl chr 7:721,809...723,923

Il27ra

interleukin 27 receptor subunit alpha

involved_in

PMID:21873635

GO_Central

NCBI chr19:24,109,698...24,121,977
Ensembl chr19:24,109,972...24,121,938

Il2ra

interleukin 2 receptor subunit alpha

acts_upstream_of_or_within

MGI:1857192 (MGI:1889048|PMID:7584142)

PMID:7584142

MGI:1889048

NCBI chr17:66,849,974...66,898,665
Ensembl chr17:66,849,974...66,898,697

Il4

interleukin 4

acts_upstream_of_or_within

(MGI:3577956|PMID:10485657), (MGI:3655409|PMID:9841920)

PMID:9841920 PMID:10485657

MGI:3577956 MGI:3655409

NCBI chr10:37,771,203...37,776,750
Ensembl chr10:37,771,203...37,776,750

Janus kinase 3

RGD

NCBI chr16:18,386,330...18,398,542
Ensembl chr16:18,386,405...18,398,536

Mir21

microRNA 21

involved_in

RNAcentral:URS00005165DA_9606 (PMID:22387553)

NCBI chr10:71,405,257...71,405,348
Ensembl chr10:71,405,257...71,405,348

Mir30b

microRNA 30b

involved_in

RNAcentral:URS000039ED8D_9606 (PMID:22387553)

NCBI chr 7:100,132,589...100,132,675
Ensembl chr 7:100,132,589...100,132,675

Ppp3ca

protein phosphatase 3 catalytic subunit alpha

involved_in

GO_REF:0000024
(MGI:2150686|PMID:8627154)

PMID:8627154

GO_REF:0000024 MGI:2150686

NCBI chr 2:225,165,981...225,440,978
Ensembl chr 2:225,165,766...225,438,974

Pycard

PYD and CARD domain containing

involved_in

(MGI:5291858|PMID:21892172)

PMID:21892172

MGI:5291858

NCBI chr 1:182,601,657...182,603,013
Ensembl chr 1:182,601,174...182,602,955

Rps3

ribosomal protein S3

involved_in

(PMID:18045535)

PMID:18045535

NCBI chr 1:153,778,363...153,783,663
Ensembl chr 1:153,777,472...153,783,680

Slamf1

signaling lymphocytic activation molecule family member 1

involved_in

(MGI:5700493|PMID:9126961)

PMID:9126961

MGI:5700493

NCBI chr13:84,270,316...84,305,497
Ensembl chr13:84,270,316...84,305,497

Stat5a

signal transducer and activator of transcription 5A

acts_upstream_of_or_within

MGI:103035 (MGI:1332382|PMID:10072077), (MGI:3577956|PMID:10485657)

PMID:10072077 PMID:10485657

MGI:1332382 MGI:3577956

NCBI chr10:85,785,537...85,809,869
Ensembl chr10:85,785,537...85,809,866

Stat5b

signal transducer and activator of transcription 5B

involved_in
acts_upstream_of_or_within

GO_REF:0000107
MGI:103036|MGI:2181592 (MGI:1332382|PMID:10072077), (MGI:3577956|PMID:10485657), (MGI:3655409|PMID:9841920)

PMID:9841920 PMID:10072077 PMID:10485657

GO_REF:0000107 MGI:1332382 MGI:3577956 MGI:3655409

NCBI chr10:85,704,841...85,775,856
Ensembl chr10:85,705,670...85,775,668

TNF superfamily member 4

PMID:19187795 PMID:21873635

RGD

PMID:9790919

RGD:634509

NCBI chr13:73,723,329...73,746,809
Ensembl chr13:73,723,329...73,746,788

Tnfsf9

TNF superfamily member 9

involved_in

IDA
IBA

PMID:21873635

RGD
GO_Central

RGD:2317344, RGD:13792537

NCBI chr 9:1,944,017...1,946,351
Ensembl chr 9:1,944,017...1,946,345

positive regulation of alpha-beta T cell activation

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

RT1-Bb

RT1 class II, locus Bb

involved_in

(MGI:4942246|PMID:14607905), (MGI:4943670|PMID:9610637)

PMID:9610637 PMID:14607905

MGI:4942246 MGI:4943670

NCBI chr20:4,596,558...4,602,201
Ensembl chr20:4,596,559...4,607,597

positive regulation of alpha-beta T cell differentiation

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Ada

adenosine deaminase

acts_upstream_of_or_within

MGI:1857117 (MGI:3620422|PMID:12163459), (MGI:3690682|PMID:11067867), (MGI:3774231|PMID:16670300)

PMID:11067867 PMID:12163459 PMID:16670300

MGI:3620422 MGI:3690682 MGI:3774231

NCBI chr 3:152,398,745...152,422,854
Ensembl chr 3:152,398,747...152,447,088

Gli3

GLI family zinc finger 3

involved_in

(MGI:3695957|PMID:15855276)

PMID:15855276

MGI:3695957

NCBI chr17:49,438,567...49,709,712
Ensembl chr17:49,438,567...49,709,712

Indian hedgehog signaling molecule

involved_in

(MGI:3836494|PMID:19109233)

NCBI chr 9:76,504,315...76,510,532
Ensembl chr 9:76,504,315...76,510,532

Itpkb

inositol-trisphosphate 3-kinase B

acts_upstream_of_or_within

MGI:3039799 (MGI:3039326|PMID:15064401)

PMID:15064401

MGI:3039326

NCBI chr13:92,069,160...92,164,281
Ensembl chr13:92,069,216...92,162,004

Nkap

NFKB activating protein

involved_in

(PMID:19409814)
GO_REF:0000024

PMID:19409814

GO_REF:0000024

NCBI chr X:116,373,031...116,392,677
Ensembl chr X:116,372,839...116,394,945

Pnp

purine nucleoside phosphorylase

acts_upstream_of_or_within

(PMID:16964310)

PMID:16964310

NCBI chr15:24,170,456...24,178,274
Ensembl chr15:24,170,602...24,203,986

Rhoa

ras homolog family member A

involved_in

(MGI:5640904|PMID:25398325)

PMID:25398325

MGI:5640904

NCBI chr 8:108,991,926...109,025,746
Ensembl chr 8:108,991,954...109,025,746

sonic hedgehog signaling molecule

involved_in

GO_REF:0000107
(MGI:3029054|PMID:14764698)
GO_REF:0000024

PMID:14764698

GO_REF:0000024 GO_REF:0000107 MGI:3029054

NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170

Syk

spleen associated tyrosine kinase

acts_upstream_of_or_within
involved_in

MGI:99613 (MGI:1096306|PMID:9275205)
GO_REF:0000107

PMID:9275205

GO_REF:0000107 MGI:1096306

NCBI chr17:12,604,615...12,678,437
Ensembl chr17:12,604,619...12,661,410

Zap70

zeta chain of T cell receptor associated protein kinase 70

acts_upstream_of_or_within

PMID:7630421 PMID:9208839 PMID:9275205

MGI:1096306 MGI:75253 MGI:893249

NCBI chr 9:38,989,750...39,011,701
Ensembl chr 9:38,989,750...39,011,700

positive regulation of alpha-beta T cell proliferation

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Blm

BLM RecQ like helicase

acts_upstream_of_or_within

MGI:3053044|MGI:3663359 (MGI:3700903|PMID:17210642)

PMID:17210642

MGI:3700903

NCBI chr 1:134,409,832...134,496,073
Ensembl chr 1:134,409,857...134,484,312

Ccr2

C-C motif chemokine receptor 2

involved_in

GO_REF:0000024
(MGI:3699670|PMID:14662900)

PMID:14662900

GO_REF:0000024 MGI:3699670

NCBI chr 8:123,734,465...123,742,483
Ensembl chr 8:123,734,430...123,742,100

CD24 molecule

acts_upstream_of_or_within

MGI:3510282 MGI:3757614 MGI:3757622 MGI:3757624 MGI:3757626 MGI:65397

PMID:1346270 PMID:1385153 PMID:7908303 PMID:8125140 PMID:9368605 More...

NCBI chr20:47,074,353...47,079,662
Ensembl chr20:47,073,512...47,079,662

Cd28

Cd28 molecule

acts_upstream_of_or_within

MGI:1857150 (MGI:3038342|PMID:14973438), (MGI:3757614|PMID:9368605), (MGI:65397|PMID:8125140)

PMID:8125140 PMID:9368605 PMID:14973438

MGI:3038342 MGI:3757614 MGI:65397

NCBI chr 9:62,166,324...62,194,674
Ensembl chr 9:62,166,192...62,194,685

Cd3e

CD3 epsilon subunit of T-cell receptor complex

acts_upstream_of_or_within

(MGI:2176424|PMID:11894097), (MGI:3038342|PMID:14973438), (MGI:65397|PMID:8125140)

PMID:8125140 PMID:11894097 PMID:14973438

MGI:2176424 MGI:3038342 MGI:65397

NCBI chr 8:45,303,848...45,315,297
Ensembl chr 8:45,303,852...45,315,022

Cd80

Cd80 molecule

acts_upstream_of_or_within

(MGI:3757624|PMID:1385153)

PMID:1385153

MGI:3757624

NCBI chr11:62,254,543...62,293,414
Ensembl chr11:62,254,624...62,292,030

Ptprc

protein tyrosine phosphatase, receptor type, C

acts_upstream_of_or_within

MGI:2181288 (MGI:73253|PMID:7751624)

PMID:7751624

MGI:73253

NCBI chr13:49,596,193...49,708,283
Ensembl chr13:49,596,193...49,708,692

receptor-interacting serine-threonine kinase 2

acts_upstream_of_or_within

MGI:2446070|MGI:2660793 (MGI:2176422|PMID:11894098), (MGI:2176424|PMID:11894097)

PMID:11894097 PMID:11894098

MGI:2176422 MGI:2176424

NCBI chr 5:29,630,806...29,662,804
Ensembl chr 5:29,631,570...29,662,657

Syk

spleen associated tyrosine kinase

involved_in
acts_upstream_of_or_within

IBA
ISO
IEA

PMID:21873635
MGI:99613 (MGI:1096306|PMID:9275205)
GO_REF:0000107

PMID:9275205 PMID:21873635

GO_REF:0000107 MGI:1096306, RGD:13792537

NCBI chr17:12,604,615...12,678,437
Ensembl chr17:12,604,619...12,661,410

TNF superfamily member 4

involved_in

(MGI:3772919|PMID:16670306)

PMID:16670306

MGI:3772919

NCBI chr13:73,723,329...73,746,809
Ensembl chr13:73,723,329...73,746,788

Zap70

zeta chain of T cell receptor associated protein kinase 70

acts_upstream_of_or_within

MGI:99515 (MGI:1096306|PMID:9275205)

PMID:9275205

MGI:1096306

NCBI chr 9:38,989,750...39,011,701
Ensembl chr 9:38,989,750...39,011,700

positive regulation of calcium-dependent cell-cell adhesion

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Kifap3

kinesin-associated protein 3

acts_upstream_of_or_within

MGI:3579410 (MGI:3578508|PMID:15834408)

PMID:15834408

MGI:3578508

NCBI chr13:76,127,702...76,264,654
Ensembl chr13:76,127,696...76,264,650

positive regulation of calcium-independent cell-cell adhesion

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Cx3cl1

C-X3-C motif chemokine ligand 1

involved_in

(PMID:12714508)
GO_REF:0000107

PMID:12714508

GO_REF:0000107

NCBI chr19:10,227,337...10,237,826
Ensembl chr19:10,227,340...10,236,833

positive regulation of CD4-positive, alpha-beta T cell activation

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Cd55

CD55 molecule (Cromer blood group)

involved_in

(PMID:16818763)

PMID:16818763

NCBI chr13:41,857,242...41,885,966
Ensembl chr13:41,857,395...41,885,831

CEA cell adhesion molecule 1

acts_upstream_of_or_within

MGI:3053071|MGI:5609428 (MGI:5451119|PMID:23123061)

NCBI chr 1:81,043,595...81,060,050
Ensembl chr 1:81,043,595...81,059,992

RT1-Da

RT1 class II, locus Da

involved_in

(PMID:15265931)

PMID:15265931

NCBI chr20:4,513,464...4,518,457
Ensembl chr20:4,512,911...4,518,455

RT1 class II, locus Db1

involved_in

(PMID:15265931)

PMID:15265931

NCBI chr20:4,548,664...4,558,237
Ensembl chr20:4,548,666...4,558,258

positive regulation of CD4-positive, alpha-beta T cell costimulation

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

TNF superfamily member 4

involved_in

(MGI:4819294|PMID:20639485)

PMID:20639485

MGI:4819294

NCBI chr13:73,723,329...73,746,809
Ensembl chr13:73,723,329...73,746,788

positive regulation of CD4-positive, alpha-beta T cell differentiation

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Cd83

CD83 molecule

acts_upstream_of_or_within

MGI:3055293 (MGI:3054335|PMID:15322158)

PMID:15322158

MGI:3054335

NCBI chr17:20,887,309...20,907,009
Ensembl chr17:20,887,309...20,907,083

forkhead box P3

acts_upstream_of_or_within

(MGI:3697020|PMID:17028180)

PMID:17028180

MGI:3697020

NCBI chr X:14,908,494...14,924,994
Ensembl chr X:14,908,494...14,923,838

NCK associated protein 1 like

involved_in

GO_REF:0000024
(MGI:3818191|PMID:19015308)

PMID:19015308

GO_REF:0000024 MGI:3818191

NCBI chr 7:134,577,443...134,622,934
Ensembl chr 7:134,577,482...134,622,934

Sash3

SAM and SH3 domain containing 3

acts_upstream_of_or_within

MGI:3716944 (MGI:3607020|PMID:16227612)

PMID:16227612

MGI:3607020

NCBI chr X:127,326,815...127,341,521
Ensembl chr X:127,326,859...127,341,519

Socs1

suppressor of cytokine signaling 1

involved_in

GO_REF:0000107
(MGI:6140589|PMID:24880459)
GO_REF:0000024

PMID:24880459

GO_REF:0000024 GO_REF:0000107 MGI:6140589

NCBI chr10:4,882,651...4,884,342
Ensembl chr10:4,882,560...4,884,383

TNF superfamily member 4

involved_in

(MGI:4819294|PMID:20639485)

PMID:20639485

MGI:4819294

NCBI chr13:73,723,329...73,746,809
Ensembl chr13:73,723,329...73,746,788

zinc finger and BTB domain containing 7B

involved_in

(MGI:6140589|PMID:24880459)

PMID:24880459

MGI:6140589

NCBI chr 2:174,795,831...174,811,980
Ensembl chr 2:174,797,453...174,814,236

positive regulation of CD4-positive, alpha-beta T cell proliferation

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Card11

caspase recruitment domain family, member 11

acts_upstream_of_or_within

MGI:3039682 (MGI:3039643|PMID:12867038)

PMID:12867038

MGI:3039643

NCBI chr12:13,620,979...13,758,115
Ensembl chr12:13,621,087...13,758,112

CD24 molecule

acts_upstream_of_or_within

MGI:2179996 (MGI:3510282|PMID:15314074), (MGI:65397|PMID:8125140)

PMID:8125140 PMID:15314074

MGI:3510282 MGI:65397

NCBI chr20:47,074,353...47,079,662
Ensembl chr20:47,073,512...47,079,662

Cd28

Cd28 molecule

acts_upstream_of_or_within

MGI:1857150 (MGI:3038342|PMID:14973438), (MGI:3757614|PMID:9368605), (MGI:65397|PMID:8125140)

PMID:8125140 PMID:9368605 PMID:14973438

MGI:3038342 MGI:3757614 MGI:65397

NCBI chr 9:62,166,324...62,194,674
Ensembl chr 9:62,166,192...62,194,685

Cd3e

CD3 epsilon subunit of T-cell receptor complex

acts_upstream_of_or_within

(MGI:2176424|PMID:11894097), (MGI:3038342|PMID:14973438), (MGI:65397|PMID:8125140)

PMID:8125140 PMID:11894097 PMID:14973438

MGI:2176424 MGI:3038342 MGI:65397

NCBI chr 8:45,303,848...45,315,297
Ensembl chr 8:45,303,852...45,315,022

Cd55

CD55 molecule (Cromer blood group)

involved_in

(PMID:16818763)

PMID:16818763

NCBI chr13:41,857,242...41,885,966
Ensembl chr13:41,857,395...41,885,831

Cd81

Cd81 molecule

involved_in

(PMID:22307619)
GO_REF:0000024

PMID:22307619

GO_REF:0000024

NCBI chr 1:198,235,861...198,251,660
Ensembl chr 1:198,241,484...198,251,660

CEA cell adhesion molecule 1

acts_upstream_of_or_within

MGI:3053071|MGI:5609428 (MGI:5451119|PMID:23123061)

NCBI chr 1:81,043,595...81,060,050
Ensembl chr 1:81,043,595...81,059,992

galectin 9

involved_in

(PMID:16116184)

PMID:16116184

NCBI chr10:63,907,018...63,930,224
Ensembl chr10:63,907,018...63,930,045

Prkcq

protein kinase C, theta

acts_upstream_of_or_within
involved_in

MGI:2664379 (MGI:3039643|PMID:12867038)
GO_REF:0000107

PMID:12867038

GO_REF:0000107 MGI:3039643

NCBI chr17:67,246,394...67,379,049
Ensembl chr17:67,246,394...67,378,704

receptor-interacting serine-threonine kinase 2

acts_upstream_of_or_within

MGI:2446070|MGI:2660793 (MGI:2176422|PMID:11894098), (MGI:2176424|PMID:11894097)

PMID:11894097 PMID:11894098

MGI:2176422 MGI:2176424

NCBI chr 5:29,630,806...29,662,804
Ensembl chr 5:29,631,570...29,662,657

Tgfbr2

transforming growth factor, beta receptor 2

involved_in

(PMID:17164348)

PMID:17164348

NCBI chr 8:115,794,537...115,883,615
Ensembl chr 8:115,794,537...115,883,228

X-C motif chemokine ligand 1

involved_in

GO_REF:0000107
(MGI:5009207|PMID:9973465)

PMID:9973465

GO_REF:0000107 MGI:5009207

NCBI chr13:77,248,865...77,252,308
Ensembl chr13:77,248,717...77,252,329

positive regulation of CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

forkhead box P3

acts_upstream_of_or_within

PMID:12612578 PMID:16275384 PMID:16301745 PMID:18573908

MGI:2653673 MGI:3695768 MGI:3700459 MGI:3799419

NCBI chr X:14,908,494...14,924,994
Ensembl chr X:14,908,494...14,923,838

Gimap5

GTPase, IMAP family member 5

RGD

PMID:15778366

RGD:2303772

NCBI chr 4:77,693,417...77,701,025
Ensembl chr 4:77,687,564...77,703,086

Il2rg

interleukin 2 receptor subunit gamma

acts_upstream_of_or_within

MGI:1857455 (MGI:3662823|PMID:16227984)

PMID:16227984

MGI:3662823

NCBI chr X:66,395,330...66,399,026
Ensembl chr X:66,392,542...66,399,823

Klhl25

kelch-like family member 25

involved_in

(PMID:34491895)
(MGI:6765767|PMID:34491895)
GO_REF:0000024

PMID:34491895

GO_REF:0000024 MGI:6765767

NCBI chr 1:129,724,894...129,750,142
Ensembl chr 1:129,722,026...129,750,227

RT1-Da

RT1 class II, locus Da

involved_in

(PMID:28467828)

PMID:28467828

NCBI chr20:4,513,464...4,518,457
Ensembl chr20:4,512,911...4,518,455

RT1 class II, locus Db1

involved_in

(PMID:28467828)

PMID:28467828

NCBI chr20:4,548,664...4,558,237
Ensembl chr20:4,548,666...4,558,258

positive regulation of CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation involved in immune response

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Ifng

interferon gamma

involved_in

(PMID:20209097)

PMID:20209097

NCBI chr 7:53,903,339...53,907,375
Ensembl chr 7:53,903,337...53,907,375

galectin 9

involved_in

(PMID:20209097)

PMID:20209097

NCBI chr10:63,907,018...63,930,224
Ensembl chr10:63,907,018...63,930,045

positive regulation of CD8-positive, alpha-beta T cell activation

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

CEA cell adhesion molecule 1

acts_upstream_of_or_within

MGI:3053071|MGI:5609428 (MGI:5451119|PMID:23123061)

NCBI chr 1:81,043,595...81,060,050
Ensembl chr 1:81,043,595...81,059,992

RT1-A2

RT1 class Ia, locus A2

involved_in

(PMID:28676677)

PMID:28676677

NCBI chr20:4,870,939...4,910,183

RT1-S3

RT1 class Ib, locus S3

involved_in

(PMID:28676677)

PMID:28676677

NCBI chr20:2,670,654...2,675,411
Ensembl chr20:2,670,709...2,675,411

positive regulation of CD8-positive, alpha-beta T cell differentiation

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Cbfb

core-binding factor subunit beta

involved_in

(MGI:3772948|PMID:18258917)

NCBI chr19:33,049,162...33,092,752
Ensembl chr19:33,049,172...33,092,751

leukocyte immunoglobulin like receptor B4

involved_in

(PMID:18420485)

PMID:18420485

NCBI chr 1:69,805,020...69,810,628
Ensembl chr 1:69,805,250...69,810,660

NCK associated protein 1 like

involved_in

GO_REF:0000024
(MGI:3818191|PMID:19015308)

PMID:19015308

GO_REF:0000024 MGI:3818191

NCBI chr 7:134,577,443...134,622,934
Ensembl chr 7:134,577,482...134,622,934

Runx1

RUNX family transcription factor 1

involved_in

GO_REF:0000024
(MGI:3772948|PMID:18258917)

GO_REF:0000024 MGI:3772948

NCBI chr11:31,839,880...32,074,427
Ensembl chr11:31,843,764...32,074,542

Runx3

RUNX family transcription factor 3

involved_in

(MGI:3772948|PMID:18258917)

NCBI chr 5:147,393,926...147,419,161
Ensembl chr 5:147,360,994...147,419,156

positive regulation of CD8-positive, alpha-beta T cell proliferation

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Cd244

CD244 molecule

involved_in

(MGI:5700312|PMID:11739483)

PMID:11739483

MGI:5700312

NCBI chr13:84,018,887...84,036,612
Ensembl chr13:84,020,095...84,036,100

Ptpn22

protein tyrosine phosphatase, non-receptor type 22

involved_in

PMID:21873635
(MGI:5562517|PMID:23871208)

PMID:23871208 PMID:21873635

MGI:5562517, RGD:13792537

NCBI chr 2:191,366,761...191,414,782
Ensembl chr 2:191,366,808...191,414,779

RT1-A2

RT1 class Ia, locus A2

involved_in

(PMID:25631937)

PMID:25631937

NCBI chr20:4,870,939...4,910,183

RT1-S3

RT1 class Ib, locus S3

involved_in

(PMID:25631937)

PMID:25631937

NCBI chr20:2,670,654...2,675,411
Ensembl chr20:2,670,709...2,675,411

X-C motif chemokine ligand 1

involved_in

(PMID:10887101)

PMID:10887101

NCBI chr13:77,248,865...77,252,308
Ensembl chr13:77,248,717...77,252,329

positive regulation of cell-cell adhesion

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Afdn

afadin, adherens junction formation factor

involved_in

(PMID:25893857)

PMID:25893857

NCBI chr 1:53,884,711...54,034,216
Ensembl chr 1:53,905,373...54,034,216

Ccl2

C-C motif chemokine ligand 2

leukocyte-endothelium

RGD

PMID:10225970

RGD:8549768

NCBI chr10:67,005,424...67,007,222
Ensembl chr10:67,005,424...67,007,226

Ccr5

C-C motif chemokine receptor 5

RGD

PMID:16622027

RGD:4890440

NCBI chr 8:123,752,423...123,757,538
Ensembl chr 8:123,752,325...123,759,260

CD24 molecule

acts_upstream_of_or_within

(MGI:3757617|PMID:8557754), (MGI:3757619|PMID:7669058), (MGI:87805|PMID:9177270)

PMID:7669058 PMID:8557754 PMID:9177270

MGI:3757617 MGI:3757619 MGI:87805

NCBI chr20:47,074,353...47,079,662
Ensembl chr20:47,073,512...47,079,662

Cd47

Cd47 molecule

involved_in

IEA
ISO
IBA

GO_REF:0000002
(PMID:15383453)
PMID:21873635

InterPro
RGD

PMID:15383453 PMID:21873635

GO_REF:0000002, RGD:13792537

NCBI chr11:50,906,052...50,970,000
Ensembl chr11:50,906,177...50,969,425

Cdh1

cadherin 1

acts_upstream_of_or_within

(MGI:50175|PMID:2519616)

PMID:2519616

MGI:50175

NCBI chr19:34,492,371...34,561,775
Ensembl chr19:34,492,371...34,561,775

Cited2

Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2

involved_in

(MGI:3813432|PMID:17932483)

PMID:17932483

MGI:3813432

NCBI chr 1:12,312,426...12,314,869
Ensembl chr 1:12,312,160...12,314,897

Fstl3

follistatin like 3

involved_in

(PMID:16336961)

PMID:16336961

NCBI chr 7:9,924,670...9,929,195
Ensembl chr 7:9,923,576...9,939,639

fucosyltransferase 7

involved_in

(PMID:18553500)

PMID:18553500

NCBI chr 3:8,237,687...8,242,273
Ensembl chr 3:8,239,384...8,242,260

Itga6

integrin subunit alpha 6

acts_upstream_of_or_within

(MGI:3757619|PMID:7669058)

PMID:7669058

MGI:3757619

NCBI chr 3:56,604,512...56,689,428
Ensembl chr 3:56,617,268...56,689,428

Itgal

integrin subunit alpha L

acts_upstream_of_or_within

(MGI:3757626|PMID:1346270)

PMID:1346270

MGI:3757626

NCBI chr 1:181,918,183...181,955,735
Ensembl chr 1:181,918,183...181,955,732

Kif26b

kinesin family member 26B

acts_upstream_of_or_within

MGI:1930780|MGI:4459557 (MGI:4454194|PMID:20439720)

PMID:20439720

MGI:4454194

NCBI chr13:90,282,821...90,689,058
Ensembl chr13:90,283,404...90,682,811

L1cam

L1 cell adhesion molecule

acts_upstream_of_or_within

(MGI:3757619|PMID:7669058)

PMID:7669058

MGI:3757619

NCBI chr X:151,597,270...151,623,776
Ensembl chr X:151,597,277...151,623,857

lymphoid enhancer binding factor 1

involved_in

(PMID:19653274)

PMID:19653274

NCBI chr 2:219,666,549...219,779,815
Ensembl chr 2:219,666,592...219,779,794

LOC100909977

leukocyte surface antigen CD47-like

involved_in

PMID:21873635

GO_Central

NCBI chr11:51,554,880...51,619,586
Ensembl chr11:51,554,714...51,619,588

Magi1

membrane associated guanylate kinase, WW and PDZ domain containing 1

involved_in

(PMID:20298433)
GO_REF:0000107

PMID:20298433

GO_REF:0000107

NCBI chr 4:126,205,667...126,811,354
Ensembl chr 4:126,206,816...126,811,691

Megf10

multiple EGF-like domains 10

involved_in

DOI:10.1093/hmg/ddz064

NCBI chr18:50,605,231...50,755,441
Ensembl chr18:50,605,656...50,754,456

Mex3b

mex-3 RNA binding family member B

acts_upstream_of_or_within

MGI:5638674 (MGI:5585359|PMID:24803656)

PMID:24803656

MGI:5585359

NCBI chr 1:136,855,130...136,859,365
Ensembl chr 1:136,855,130...136,859,354

Myo10

myosin X

acts_upstream_of_or_within

MGI:2447076 (MGI:4454194|PMID:20439720)

PMID:20439720

MGI:4454194

NCBI chr 2:76,100,962...76,304,164
Ensembl chr 2:76,100,987...76,303,030

Nodal

nodal growth differentiation factor

involved_in

(PMID:21116837)

PMID:21116837

NCBI chr20:29,368,436...29,376,837
Ensembl chr20:29,368,436...29,376,837

phosphodiesterase 4D

RGD

NCBI chr 2:40,014,933...41,529,190
Ensembl chr 2:40,019,933...41,525,884

Plpp3

phospholipid phosphatase 3

involved_in

(PMID:20123964)
GO_REF:0000107

PMID:20123964

GO_REF:0000107

NCBI chr 5:119,927,085...120,002,206
Ensembl chr 5:119,927,085...120,002,205

Rap1gap

Rap1 GTPase-activating protein

acts_upstream_of_or_within

(MGI:5585359|PMID:24803656)

PMID:24803656

MGI:5585359

NCBI chr 5:149,873,987...149,939,254
Ensembl chr 5:149,892,019...149,939,253

Rnase10

ribonuclease A family member 10

involved_in

GO_REF:0000024
(MGI:5520030|PMID:22750516)

PMID:22750516

GO_REF:0000024 MGI:5520030

NCBI chr15:24,225,293...24,228,805
Ensembl chr15:24,226,691...24,228,561

Smad7

SMAD family member 7

involved_in

(PMID:18593713)
(MGI:5532916|PMID:18593713)
GO_REF:0000107

PMID:18593713

GO_REF:0000107 MGI:5532916

NCBI chr18:68,988,429...69,016,774
Ensembl chr18:68,988,429...69,016,765

Sox2

SRY-box transcription factor 2

RGD

PMID:20869108

RGD:8661684

NCBI chr 2:117,536,929...117,539,338
Ensembl chr 2:117,536,929...117,539,338

Tbx18

T-box transcription factor 18

acts_upstream_of_or_within

MGI:3044915 (MGI:3788971|PMID:18353863)

PMID:18353863

MGI:3788971

NCBI chr 8:88,652,054...88,680,081
Ensembl chr 8:88,652,054...88,680,058

Wnt family member 5A

RGD

NCBI chr16:3,695,667...3,718,234
Ensembl chr16:3,697,032...3,718,234

positive regulation of cell-cell adhesion mediated by cadherin

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Adam19

ADAM metallopeptidase domain 19

involved_in

(PMID:19727588)

PMID:19727588

NCBI chr10:30,491,362...30,583,115
Ensembl chr10:30,491,405...30,583,105

Afdn

afadin, adherens junction formation factor

involved_in

(PMID:16882694)

PMID:16882694

NCBI chr 1:53,884,711...54,034,216
Ensembl chr 1:53,905,373...54,034,216

Dennd6a

DENN domain containing 6A

involved_in

(PMID:22595670)

PMID:22595670

NCBI chr16:1,837,019...1,885,420
Ensembl chr16:1,837,059...1,885,420

Flot1

flotillin 1

involved_in

(PMID:24046456)
(MGI:5634880|PMID:24046456)
PMID:21873635

PMID:24046456 PMID:21873635

MGI:5634880, RGD:13792537

NCBI chr20:2,917,864...2,927,993
Ensembl chr20:2,917,137...2,927,978

Ptpru

protein tyrosine phosphatase, receptor type, U

involved_in

(PMID:16574648)

PMID:16574648

NCBI chr 5:143,950,542...144,024,791
Ensembl chr 5:143,950,965...144,024,768

Tjp1

tight junction protein 1

involved_in

(PMID:25753039)

PMID:25753039

NCBI chr 1:118,849,838...119,094,492
Ensembl chr 1:118,849,838...119,094,432

Wnt3a

Wnt family member 3A

acts_upstream_of_or_within

(MGI:4459820|PMID:10893270)

PMID:10893270

MGI:4459820

NCBI chr10:44,034,174...44,078,463
Ensembl chr10:44,034,194...44,078,324

Wnt5a

Wnt family member 5A

acts_upstream_of_or_within

(MGI:4459820|PMID:10893270)

PMID:10893270

MGI:4459820

NCBI chr16:3,695,667...3,718,234
Ensembl chr16:3,697,032...3,718,234

positive regulation of cell-cell adhesion mediated by integrin

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Ccl5

C-C motif chemokine ligand 5

involved_in

(PMID:8558019)

PMID:8558019

NCBI chr10:68,322,826...68,327,365
Ensembl chr10:68,322,829...68,327,377

CD24 molecule

acts_upstream_of_or_within

(MGI:3757620|PMID:7534304)

PMID:7534304

MGI:3757620

NCBI chr20:47,074,353...47,079,662
Ensembl chr20:47,073,512...47,079,662

Cd3e

CD3 epsilon subunit of T-cell receptor complex

involved_in

UniProtKB:P24063|UniProtKB:Q86WV1 (MGI:6201899|PMID:12652296)

MGI:6201899

NCBI chr 8:45,303,848...45,315,297
Ensembl chr 8:45,303,852...45,315,022

Cxcl13

C-X-C motif chemokine ligand 13

involved_in

(MGI:3702377|PMID:15972452)

PMID:15972452

MGI:3702377

NCBI chr14:13,608,894...13,613,965
Ensembl chr14:13,608,902...13,613,933

Piezo1

piezo-type mechanosensitive ion channel component 1

involved_in

GO_REF:0000107
GO_REF:0000024
(PMID:20016066)

Ensembl
UniProt
RGD

PMID:20016066

GO_REF:0000024 GO_REF:0000107

NCBI chr19:50,544,580...50,606,812
Ensembl chr19:50,544,582...50,606,501

Podxl

podocalyxin-like

involved_in

ISO
ISS
IBA

(PMID:18456258)
GO_REF:0000024
PMID:21873635

PMID:18456258 PMID:21873635

GO_REF:0000024, RGD:13792537

NCBI chr 4:60,135,124...60,181,829
Ensembl chr 4:60,135,109...60,181,899

Skap1

src kinase associated phosphoprotein 1

involved_in

UniProtKB:P11835|UniProtKB:P22646|UniProtKB:P24063 (PMID:12652296)

NCBI chr10:81,425,472...81,732,651
Ensembl chr10:81,425,525...81,732,650

positive regulation of cytotoxic T cell differentiation

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Sart1

spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP

involved_in

(PMID:10209962)

PMID:19187795 PMID:21873635

PMID:10209962

NCBI chr 1:202,690,472...202,699,136
Ensembl chr 1:202,690,459...202,699,136

Tnfsf9

TNF superfamily member 9

involved_in

IDA
IBA

PMID:21873635

RGD
GO_Central

RGD:2317344, RGD:13792537

NCBI chr 9:1,944,017...1,946,351
Ensembl chr 9:1,944,017...1,946,345

positive regulation of erythrocyte aggregation

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

galectin 1

RGD

NCBI chr 7:110,485,239...110,488,345
Ensembl chr 7:110,481,392...110,488,345

positive regulation of establishment of T cell polarity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Abl1

ABL proto-oncogene 1, non-receptor tyrosine kinase

involved_in

(MGI:6142789|PMID:22810897)

PMID:22810897

MGI:6142789

NCBI chr 3:14,979,853...15,083,065
Ensembl chr 3:14,979,853...15,083,065

Abl2

ABL proto-oncogene 2, non-receptor tyrosine kinase

involved_in

(MGI:6142789|PMID:22810897)

PMID:22810897

MGI:6142789

NCBI chr13:68,673,702...68,839,742
Ensembl chr13:68,673,722...68,839,742

Dock8

dedicator of cytokinesis 8

involved_in

(PMID:28028151)
PMID:21873635
(MGI:5824146|PMID:28028151)

PMID:28028151 PMID:21873635

MGI:5824146, RGD:13792537

NCBI chr 1:222,649,309...222,842,474
Ensembl chr 1:222,649,309...222,842,474

Flot2

flotillin 2

involved_in

(PMID:21696602)

PMID:21696602

NCBI chr10:62,926,047...62,947,759
Ensembl chr10:62,920,665...62,947,756

positive regulation of gamma-delta T cell differentiation

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Gimap5

GTPase, IMAP family member 5

RGD

PMID:11859104

RGD:625608

NCBI chr 4:77,693,417...77,701,025
Ensembl chr 4:77,687,564...77,703,086

Lck

LCK proto-oncogene, Src family tyrosine kinase

acts_upstream_of_or_within

MGI:1857211 (MGI:70338|PMID:7807014)

PMID:7807014

MGI:70338

NCBI chr 5:141,888,319...141,916,992
Ensembl chr 5:141,888,326...141,903,794

lymphoid enhancer binding factor 1

involved_in

GO_REF:0000024
(MGI:5486619|PMID:23562159)

PMID:23562159

GO_REF:0000024 MGI:5486619

NCBI chr 2:219,666,549...219,779,815
Ensembl chr 2:219,666,592...219,779,794

NCK associated protein 1 like

involved_in

GO_REF:0000024
(MGI:3818191|PMID:19015308)

PMID:19015308

GO_REF:0000024 MGI:3818191

NCBI chr 7:134,577,443...134,622,934
Ensembl chr 7:134,577,482...134,622,934

Ptprc

protein tyrosine phosphatase, receptor type, C

acts_upstream_of_or_within

MGI:2181288 (MGI:70338|PMID:7807014)

PMID:7807014

MGI:70338

NCBI chr13:49,596,193...49,708,283
Ensembl chr13:49,596,193...49,708,692

Sox13

SRY-box transcription factor 13

involved_in

(MGI:5486619|PMID:23562159)

PMID:23562159

MGI:5486619

NCBI chr13:44,831,097...44,875,522
Ensembl chr13:44,831,085...44,875,762

Sox4

SRY-box transcription factor 4

involved_in

(MGI:5486619|PMID:23562159)

PMID:23562159

MGI:5486619

NCBI chr17:35,667,809...35,672,515
Ensembl chr17:35,667,537...35,673,665

Stat5a

signal transducer and activator of transcription 5A

acts_upstream_of_or_within

MGI:103035 (MGI:3054293|PMID:15294943)

PMID:15294943

MGI:3054293

NCBI chr10:85,785,537...85,809,869
Ensembl chr10:85,785,537...85,809,866

Stat5b

signal transducer and activator of transcription 5B

involved_in
acts_upstream_of_or_within

GO_REF:0000107
MGI:103036 (MGI:3054293|PMID:15294943)

PMID:15294943

GO_REF:0000107 MGI:3054293

NCBI chr10:85,704,841...85,775,856
Ensembl chr10:85,705,670...85,775,668

Syk

spleen associated tyrosine kinase

involved_in
acts_upstream_of_or_within

GO_REF:0000107
MGI:1857421|MGI:2384078 (MGI:77314|PMID:7477352), (MGI:83585|PMID:8790395)

PMID:7477352 PMID:8790395

GO_REF:0000107 MGI:77314 MGI:83585

NCBI chr17:12,604,615...12,678,437
Ensembl chr17:12,604,619...12,661,410

positive regulation of heterotypic cell-cell adhesion

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Ager

advanced glycosylation end product-specific receptor

involved_in

UniProtKB:P13612|UniProtKB:P19320 (PMID:11078691)

PMID:11078691

NCBI chr20:4,148,150...4,151,361
Ensembl chr20:4,147,890...4,151,078

Alox15

arachidonate 15-lipoxygenase

RGD

PMID:15576842

RGD:5509796

NCBI chr10:55,060,169...55,068,885
Ensembl chr10:55,060,412...55,068,874

Bmp7

bone morphogenetic protein 7

involved_in

(PMID:15100360)

PMID:15100360

NCBI chr 3:161,639,915...161,716,938
Ensembl chr 3:161,516,462...161,716,788

CD44 molecule (Indian blood group)

involved_in

(PMID:15100360)

PMID:15100360

NCBI chr 3:89,155,850...89,244,615
Ensembl chr 3:89,157,058...89,244,620

Ceacam6

CEA cell adhesion molecule 6

involved_in

(PMID:16204051)

PMID:16204051

NCBI chr 1:80,416,531...80,434,668
Ensembl chr 1:80,416,531...80,434,668

Fga

fibrinogen alpha chain

involved_in

(PMID:8100742)
PMID:21873635

PMID:8100742 PMID:21873635

NCBI chr 2:168,365,364...168,381,533
Ensembl chr 2:168,374,120...168,381,528

Fgb

fibrinogen beta chain

involved_in

(PMID:8100742)

PMID:8100742

NCBI chr 2:168,394,901...168,402,863
Ensembl chr 2:168,394,916...168,405,979

Fgg

fibrinogen gamma chain

involved_in

(PMID:8100742)

PMID:8100742

NCBI chr 2:168,354,880...168,362,325
Ensembl chr 2:168,355,013...168,362,322

Flot1

flotillin 1

involved_in

(PMID:25204797)

PMID:25204797

NCBI chr20:2,917,864...2,927,993
Ensembl chr20:2,917,137...2,927,978

Gcnt2

glucosaminyl (N-acetyl) transferase 2

involved_in

(PMID:21750175)

PMID:21750175

NCBI chr17:23,796,859...23,901,625
NCBI chr17:23,866,602...23,868,691
Ensembl chr17:23,796,859...23,901,611

Il1b

interleukin 1 beta

involved_in

(PMID:15100360)

PMID:15100360

NCBI chr 3:116,577,005...116,583,386
Ensembl chr 3:116,577,010...116,583,415

Lck

LCK proto-oncogene, Src family tyrosine kinase

involved_in

(PMID:27400149)
GO_REF:0000107

GO_REF:0000107

NCBI chr 5:141,888,319...141,916,992
Ensembl chr 5:141,888,326...141,903,794

Skap1

src kinase associated phosphoprotein 1

involved_in

(PMID:12652296)

NCBI chr10:81,425,472...81,732,651
Ensembl chr10:81,425,525...81,732,650

Thy1

Thy-1 cell surface antigen

involved_in

(PMID:15004192)

PMID:15004192

NCBI chr 8:44,389,495...44,394,688
Ensembl chr 8:44,389,513...44,394,659

Tnf

tumor necrosis factor

involved_in

(PMID:10604883), (PMID:20551324)
(MGI:5796069|PMID:26808574)

PMID:10604883 PMID:20551324 PMID:26808574

MGI:5796069

NCBI chr20:3,622,011...3,624,629
Ensembl chr20:3,622,011...3,624,629

positive regulation of homophilic cell adhesion

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

CEA cell adhesion molecule 1

involved_in

PMID:8831574

UniProt

PMID:8831574

RGD:11059567

NCBI chr 1:81,043,595...81,060,050
Ensembl chr 1:81,043,595...81,059,992

Ptpn23

protein tyrosine phosphatase, non-receptor type 23

involved_in

(PMID:21724833)
GO_REF:0000107

PMID:21724833

GO_REF:0000107

NCBI chr 8:110,360,804...110,383,271
Ensembl chr 8:110,360,804...110,383,271

positive regulation of homotypic cell-cell adhesion

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

ankyrin 3

RGD

NCBI chr20:18,602,267...19,225,831
Ensembl chr20:18,602,786...19,086,300

Ccl5

C-C motif chemokine ligand 5

involved_in

(PMID:10488085)

PMID:10488085

NCBI chr10:68,322,826...68,327,365
Ensembl chr10:68,322,829...68,327,377

Jak1

Janus kinase 1

involved_in

(PMID:21679692)

PMID:21679692

NCBI chr 5:115,780,248...115,888,841
Ensembl chr 5:115,780,248...115,888,926

Plaur

plasminogen activator, urokinase receptor

involved_in

(PMID:21679692)

PMID:21679692

NCBI chr 1:80,053,441...80,068,384
Ensembl chr 1:80,050,324...80,068,595

Tnfsf11

TNF superfamily member 11

involved_in

(PMID:9367155)
GO_REF:0000107

PMID:9367155

GO_REF:0000107

NCBI chr15:53,674,990...53,705,171
Ensembl chr15:53,673,877...53,705,445

positive regulation of immature T cell proliferation

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

receptor-interacting serine-threonine kinase 2

acts_upstream_of_or_within

MGI:2660793 (MGI:2176422|PMID:11894098)

PMID:11894098

MGI:2176422

NCBI chr 5:29,630,806...29,662,804
Ensembl chr 5:29,631,570...29,662,657

positive regulation of immature T cell proliferation in thymus

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Blm

BLM RecQ like helicase

acts_upstream_of_or_within

MGI:3053044|MGI:3663359 (MGI:3700903|PMID:17210642)

PMID:17210642

MGI:3700903

NCBI chr 1:134,409,832...134,496,073
Ensembl chr 1:134,409,857...134,484,312

Bmi1

BMI1 proto-oncogene, polycomb ring finger

involved_in

(MGI:3615850|PMID:15964995)

PMID:15964995

MGI:3615850

NCBI chr17:81,332,175...81,341,625
Ensembl chr17:81,332,214...81,388,690

forkhead box P3

acts_upstream_of_or_within

MGI:1857034 (MGI:3695084|PMID:16230479)

PMID:16230479

MGI:3695084

NCBI chr X:14,908,494...14,924,994
Ensembl chr X:14,908,494...14,923,838

Il1a

interleukin 1 alpha

involved_in

PMID:21873635

GO_Central

PMID:8590311 PMID:21873635

NCBI chr 3:116,526,601...116,537,055
Ensembl chr 3:116,526,604...116,536,822

Il1b

interleukin 1 beta

involved_in

IDA
IBA

PMID:21873635

RGD
GO_Central

RGD:7401228, RGD:13792537

NCBI chr 3:116,577,005...116,583,386
Ensembl chr 3:116,577,010...116,583,415

receptor-interacting serine-threonine kinase 2

acts_upstream_of_or_within

MGI:2660793 (MGI:2176422|PMID:11894098)

PMID:11894098

MGI:2176422

NCBI chr 5:29,630,806...29,662,804
Ensembl chr 5:29,631,570...29,662,657

sonic hedgehog signaling molecule

involved_in

GO_REF:0000107
(MGI:3029054|PMID:14764698), (MGI:3847177|PMID:19273836)
GO_REF:0000024

PMID:14764698 PMID:19273836

GO_REF:0000024 GO_REF:0000107 MGI:3029054 MGI:3847177

NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170

positive regulation of leukocyte adhesion to arterial endothelial cell

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Alox5

arachidonate 5-lipoxygenase

involved_in

GO_REF:0000107
GO_REF:0000024
(MGI:5619939|PMID:23720274)

Ensembl
UniProt
RGD

PMID:23720274

GO_REF:0000024 GO_REF:0000107 MGI:5619939

NCBI chr 4:149,531,329...149,578,696
Ensembl chr 4:149,531,515...149,578,743

Mir92a1

microRNA 92a-1

involved_in

(PMID:22267480)

NCBI chr15:92,181,336...92,181,413
Ensembl chr15:92,181,336...92,181,413

Mir92a2

microRNA 92a-2

involved_in

(PMID:22267480)

NCBI chr X:132,421,942...132,422,033
Ensembl chr X:132,421,942...132,422,033

Tnf

tumor necrosis factor

involved_in

(PMID:22267480)

NCBI chr20:3,622,011...3,624,629
Ensembl chr20:3,622,011...3,624,629

positive regulation of leukocyte adhesion to vascular endothelial cell

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Ets1

ETS proto-oncogene 1, transcription factor

involved_in

(PMID:21310411)

PMID:21310411

NCBI chr 8:31,045,909...31,168,010
Ensembl chr 8:31,045,945...31,168,010

fucosyltransferase 7

involved_in

(PMID:29138114)

PMID:29138114

NCBI chr 3:8,237,687...8,242,273
Ensembl chr 3:8,239,384...8,242,260

Icam1

intercellular adhesion molecule 1

RGD

PMID:10517906

RGD:11520788

NCBI chr 8:19,553,063...19,565,438
Ensembl chr 8:19,553,645...19,565,438

Il6

interleukin 6

acts_upstream_of_or_within

(PMID:30670152)

PMID:30670152

NCBI chr 4:5,214,602...5,219,178
Ensembl chr 4:5,213,394...5,219,178

Irak1

interleukin-1 receptor-associated kinase 1

involved_in

(PMID:25515214)

NCBI chr X:151,768,621...151,778,521
Ensembl chr X:151,768,777...151,778,521

Itgb2

integrin subunit beta 2

involved_in

(MGI:5568278|PMID:24458438)

PMID:24458438

MGI:5568278

NCBI chr20:11,061,394...11,097,656
Ensembl chr20:11,061,430...11,097,600

Mdk

midkine

involved_in

GO_REF:0000024
(MGI:5568278|PMID:24458438)

PMID:24458438

GO_REF:0000024 MGI:5568278

NCBI chr 3:77,901,156...77,903,997
Ensembl chr 3:77,901,158...77,903,130

Mir21

microRNA 21

involved_in

(PMID:21636785)

PMID:21636785

NCBI chr10:71,405,257...71,405,348
Ensembl chr10:71,405,257...71,405,348

Mir92a1

microRNA 92a-1

involved_in

(PMID:23897866), (PMID:24255059)

PMID:23897866 PMID:24255059

NCBI chr15:92,181,336...92,181,413
Ensembl chr15:92,181,336...92,181,413

Mir92a2

microRNA 92a-2

involved_in

(PMID:23897866), (PMID:24255059)

PMID:23897866 PMID:24255059

NCBI chr X:132,421,942...132,422,033
Ensembl chr X:132,421,942...132,422,033

Nfat5

nuclear factor of activated T-cells 5

involved_in

(PMID:25515214)

NCBI chr19:35,199,737...35,286,675
Ensembl chr19:35,199,016...35,286,675

Rela

RELA proto-oncogene, NF-kB subunit

involved_in

(PMID:25515214)

NCBI chr 1:202,925,001...202,935,484
Ensembl chr 1:202,924,945...202,935,484

Rhoa

ras homolog family member A

involved_in

(PMID:25515214)

NCBI chr 8:108,991,926...109,025,746
Ensembl chr 8:108,991,954...109,025,746

Tnf

tumor necrosis factor

involved_in

(PMID:26371161)

PMID:26371161

NCBI chr20:3,622,011...3,624,629
Ensembl chr20:3,622,011...3,624,629

Traf6

TNF receptor associated factor 6

involved_in

(PMID:25515214)

NCBI chr 3:87,963,517...87,988,316
Ensembl chr 3:87,963,514...87,983,507

positive regulation of leukocyte cell-cell adhesion

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Itga4

integrin subunit alpha 4

RGD

PMID:7680140

RGD:9698449

NCBI chr 3:64,162,764...64,235,010
Ensembl chr 3:64,163,085...64,233,715

Lck

LCK proto-oncogene, Src family tyrosine kinase

involved_in

(PMID:27400149)

NCBI chr 5:141,888,319...141,916,992
Ensembl chr 5:141,888,326...141,903,794

Mdk

midkine

involved_in

GO_REF:0000024
(PMID:24458438)

PMID:24458438

GO_REF:0000024

NCBI chr 3:77,901,156...77,903,997
Ensembl chr 3:77,901,158...77,903,130

Ptafr

platelet-activating factor receptor

RGD

PMID:8592427

RGD:10041047

NCBI chr 5:144,765,770...144,795,057
Ensembl chr 5:144,765,976...144,795,251

Skap1

src kinase associated phosphoprotein 1

involved_in

(PMID:12652296)

NCBI chr10:81,425,472...81,732,651
Ensembl chr10:81,425,525...81,732,650

positive regulation of leukocyte tethering or rolling

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

calpain 1

RGD

NCBI chr 1:203,275,912...203,300,848
Ensembl chr 1:203,277,344...203,300,177

Ccr2

C-C motif chemokine receptor 2

acts_upstream_of_or_within

MGI:2158345 (MGI:1100445|PMID:9342361)

PMID:9342361

MGI:1100445

NCBI chr 8:123,734,465...123,742,483
Ensembl chr 8:123,734,430...123,742,100

Chst2

carbohydrate sulfotransferase 2

involved_in

(MGI:3662819|PMID:16227985)

PMID:16227985

MGI:3662819

NCBI chr 8:95,960,067...95,965,803
Ensembl chr 8:95,959,826...95,966,955

Chst4

carbohydrate sulfotransferase 4

involved_in

(MGI:3662819|PMID:16227985)

PMID:16227985

MGI:3662819

NCBI chr19:37,993,471...38,002,123
Ensembl chr19:37,991,417...38,003,608

Elane

elastase, neutrophil expressed

RGD

PMID:20860667

RGD:10450565

NCBI chr 7:9,817,251...9,819,174
Ensembl chr 7:9,817,252...9,819,100

Fut4

fucosyltransferase 4

involved_in

GO_REF:0000107
(MGI:1860416|PMID:10894166), (MGI:2387990|PMID:11485743)
GO_REF:0000024

PMID:10894166 PMID:11485743

GO_REF:0000024 GO_REF:0000107 MGI:1860416 MGI:2387990

NCBI chr 8:11,586,721...11,590,682
Ensembl chr 8:11,586,721...11,590,682

fucosyltransferase 7

involved_in

GO_REF:0000024
(MGI:1860416|PMID:10894166), (MGI:2387990|PMID:11485743), (MGI:3578437|PMID:15843584)

PMID:10894166 PMID:11485743 PMID:15843584

GO_REF:0000024 MGI:1860416 MGI:2387990 MGI:3578437

NCBI chr 3:8,237,687...8,242,273
Ensembl chr 3:8,239,384...8,242,260

Gcnt1

glucosaminyl (N-acetyl) transferase 1

involved_in

(MGI:2679759|PMID:9881978)

PMID:9881978

MGI:2679759

NCBI chr 1:214,718,344...214,755,735
Ensembl chr 1:214,718,293...214,758,776

Gp1ba

glycoprotein Ib platelet subunit alpha

RGD

PMID:12218538

RGD:150527852

NCBI chr10:55,352,938...55,355,804
Ensembl chr10:55,352,899...55,356,774

Itga4

integrin subunit alpha 4

RGD

PMID:9394821

RGD:9698423

NCBI chr 3:64,162,764...64,235,010
Ensembl chr 3:64,163,085...64,233,715

Pawr

pro-apoptotic WT1 regulator

RGD

PMID:12133973

RGD:9835372

NCBI chr 7:43,645,028...43,725,033
Ensembl chr 7:43,645,084...43,725,028

Ptafr

platelet-activating factor receptor

RGD

PMID:10528212

RGD:10041051

NCBI chr 5:144,765,770...144,795,057
Ensembl chr 5:144,765,976...144,795,251

Sele

selectin E

involved_in

ISS
IEA
ISO

GO_REF:0000024
GO_REF:0000107
(MGI:1860416|PMID:10894166)

UniProt
Ensembl
RGD

PMID:10894166

GO_REF:0000024 GO_REF:0000107 MGI:1860416

NCBI chr13:76,402,841...76,412,741
Ensembl chr13:76,403,304...76,412,741

Selp

selectin P

involved_in

ISS
ISO
IEA

GO_REF:0000024
(MGI:1860416|PMID:10894166)
GO_REF:0000107

UniProt
RGD
Ensembl

PMID:10894166

GO_REF:0000024 GO_REF:0000107 MGI:1860416

NCBI chr13:76,476,229...76,511,846
Ensembl chr13:76,476,295...76,511,845

St3gal4

ST3 beta-galactoside alpha-2,3-sialyltransferase 4

involved_in

(PMID:25498912)
(MGI:6467688|PMID:25498912)
GO_REF:0000024

PMID:25498912

GO_REF:0000024 MGI:6467688

NCBI chr 8:33,415,666...33,465,365
Ensembl chr 8:33,415,671...33,524,389

positive regulation of memory T cell activation

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

CEA cell adhesion molecule 1

acts_upstream_of_or_within

MGI:3053071|MGI:5609428 (MGI:5451119|PMID:23123061)

NCBI chr 1:81,043,595...81,060,050
Ensembl chr 1:81,043,595...81,059,992

Cyrib

CYFIP related Rac1 interactor B

involved_in

(MGI:5432330|PMID:22522492)

PMID:22522492

MGI:5432330

NCBI chr 7:95,633,876...95,760,588
Ensembl chr 7:95,633,876...95,697,686

TNF superfamily member 4

involved_in

(MGI:3763508|PMID:12496423)

PMID:12496423

MGI:3763508

NCBI chr13:73,723,329...73,746,809
Ensembl chr13:73,723,329...73,746,788

positive regulation of memory T cell differentiation

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Cd46

CD46 molecule

involved_in

(PMID:12540904)

PMID:12540904

NCBI chr13:106,575,586...106,606,325
Ensembl chr13:106,574,858...106,660,445

Il23a

interleukin 23 subunit alpha

involved_in

(MGI:3027369|PMID:14688363)

PMID:14688363

MGI:3027369

NCBI chr 7:721,809...723,923
Ensembl chr 7:721,809...723,923

Pck1

phosphoenolpyruvate carboxykinase 1

involved_in

GO_REF:0000024
(MGI:6119963|PMID:29230018)

PMID:29230018

GO_REF:0000024 MGI:6119963

NCBI chr 3:161,930,256...161,936,205
Ensembl chr 3:161,930,256...161,936,191

RT1-Da

RT1 class II, locus Da

involved_in

(PMID:27591323)

PMID:27591323

NCBI chr20:4,513,464...4,518,457
Ensembl chr20:4,512,911...4,518,455

RT1 class II, locus Db1

involved_in

(PMID:27591323)

PMID:27591323

NCBI chr20:4,548,664...4,558,237
Ensembl chr20:4,548,666...4,558,258

TNF superfamily member 4

involved_in

(MGI:3806904|PMID:18713990)

PMID:18713990

MGI:3806904

NCBI chr13:73,723,329...73,746,809
Ensembl chr13:73,723,329...73,746,788

positive regulation of monocyte aggregation

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

CD44 molecule (Indian blood group)

involved_in

(PMID:20522558)

PMID:20522558

NCBI chr 3:89,155,850...89,244,615
Ensembl chr 3:89,157,058...89,244,620

Has2

hyaluronan synthase 2

involved_in

(PMID:20522558)