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ONTOLOGY REPORT - ANNOTATIONS


Term:corpus callosum development
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Accession:GO:0022038 term browser browse the term
Definition:The process whose specific outcome is the progression of the corpus callosum over time, from its formation to the mature structure. The corpus callosum is a thick bundle of nerve fibers comprising a commissural plate connecting the two cerebral hemispheres. It consists of contralateral axon projections that provide communication between the right and left cerebral hemispheres.



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corpus callosum development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atg16l1 autophagy related 16-like 1 acts_upstream_of_or_within ISO MGI:4432181 (MGI:6095492|PMID:29078390) RGD PMID:29078390 MGI:6095492 NCBI chr 9:88,420,737...88,457,530
Ensembl chr 9:88,422,038...88,457,529
JBrowse link
G Cacna1c calcium voltage-gated channel subunit alpha1 C IEP RGD PMID:22473424 RGD:10411906 NCBI chr 4:151,764,138...152,379,454
Ensembl chr 4:151,764,138...152,379,648
JBrowse link
G Cdk5 cyclin-dependent kinase 5 acts_upstream_of_or_within ISO MGI:1928281|MGI:3043819 (MGI:3764566|PMID:18032654) RGD PMID:18032654 MGI:3764566 NCBI chr 4:10,754,682...10,760,110
Ensembl chr 4:10,754,687...10,760,112
JBrowse link
G Coro1c coronin 1C acts_upstream_of_or_within ISO MGI:4419168 (MGI:6095492|PMID:29078390) RGD PMID:29078390 MGI:6095492 NCBI chr12:42,712,960...42,785,179
Ensembl chr12:42,712,991...42,785,179
JBrowse link
G Dcc DCC netrin 1 receptor IEP RGD PMID:22473424 RGD:10411906 NCBI chr18:64,868,987...65,972,783
Ensembl chr18:64,873,898...65,972,740
JBrowse link
G Dmxl2 Dmx-like 2 acts_upstream_of_or_within ISO MGI:4432280 (MGI:6095492|PMID:29078390) RGD PMID:29078390 MGI:6095492 NCBI chr 8:54,741,164...54,884,948
Ensembl chr 8:54,741,160...54,885,161
JBrowse link
G Ephb2 Eph receptor B2 involved_in ISO (MGI:84499|PMID:8947026) RGD PMID:8947026 MGI:84499 NCBI chr 5:148,889,574...149,077,027
Ensembl chr 5:148,897,246...149,077,059
JBrowse link
G Ephb3 Eph receptor B3 involved_in ISO (MGI:84499|PMID:8947026) RGD PMID:8947026 MGI:84499 NCBI chr11:79,840,668...79,859,467
Ensembl chr11:79,840,668...79,859,370
JBrowse link
G Herc1 HECT and RLD domain containing E3 ubiquitin protein ligase family member 1 acts_upstream_of_or_within ISO MGI:6102914 (MGI:6095492|PMID:29078390) RGD PMID:29078390 MGI:6095492 NCBI chr 8:66,857,169...67,070,318
Ensembl chr 8:66,856,935...67,070,312
JBrowse link
G Kcna1 potassium voltage-gated channel subfamily A member 1 IEP RGD PMID:22473424 RGD:10411906 NCBI chr 4:159,464,223...159,472,905
Ensembl chr 4:159,464,188...159,472,682
JBrowse link
G Kcna2 potassium voltage-gated channel subfamily A member 2 IEP RGD PMID:22473424 RGD:10411906 NCBI chr 2:194,704,555...194,718,387
Ensembl chr 2:194,704,639...194,718,400
JBrowse link
G Kcna3 potassium voltage-gated channel subfamily A member 3 IEP RGD PMID:22473424 RGD:10411906 NCBI chr 2:194,632,360...194,633,937
Ensembl chr 2:194,632,196...194,650,138
JBrowse link
G Kcnc1 potassium voltage-gated channel subfamily C member 1 IEP RGD PMID:22473424 RGD:10411906 NCBI chr 1:96,902,953...96,944,744
Ensembl chr 1:96,902,953...96,944,744
JBrowse link
G Kcnc3 potassium voltage-gated channel subfamily C member 3 IEP RGD PMID:22473424 RGD:10411906 NCBI chr 1:95,080,960...95,095,165
Ensembl chr 1:95,080,960...95,095,160
JBrowse link
G Kcnc4 potassium voltage-gated channel subfamily C member 4 IEP RGD PMID:22473424 RGD:10411906 NCBI chr 2:195,063,967...195,099,233
Ensembl chr 2:195,071,769...195,099,233
JBrowse link
G Kif21b kinesin family member 21B acts_upstream_of_or_within ISO MGI:4364527 (MGI:6095492|PMID:29078390) RGD PMID:29078390 MGI:6095492 NCBI chr13:47,576,142...47,626,112
Ensembl chr13:47,576,160...47,626,127
JBrowse link
G Lpar1 lysophosphatidic acid receptor 1 IEP RGD PMID:9753172 RGD:2317716 NCBI chr 5:73,229,047...73,347,874
Ensembl chr 5:73,229,625...73,369,895
JBrowse link
G Nsun5 NOP2/Sun RNA methyltransferase 5 involved_in ISO (MGI:6359541|PMID:31174389) RGD PMID:31174389 MGI:6359541 NCBI chr12:21,293,637...21,299,319
Ensembl chr12:21,293,645...21,299,272
JBrowse link
G Ptprs protein tyrosine phosphatase, receptor type, S acts_upstream_of_or_within ISO MGI:2158734 (MGI:3614607|PMID:15842738) RGD PMID:15842738 MGI:3614607 NCBI chr 9:1,245,408...1,307,015
Ensembl chr 9:1,245,410...1,306,947
JBrowse link
G Rpgrip1l Rpgrip1-like acts_upstream_of_or_within ISO MGI:3716208 (MGI:3716248|PMID:17558409) RGD PMID:17558409 MGI:3716248 NCBI chr19:15,692,189...15,785,083
Ensembl chr19:15,692,150...15,785,083
JBrowse link
G Rtn4r reticulon 4 receptor involved_in ISS
ISO
GO_REF:0000024
(MGI:5824191|PMID:27339102)
UniProt
RGD
PMID:27339102 GO_REF:0000024 MGI:5824191 NCBI chr11:82,844,585...82,869,012
Ensembl chr11:82,844,309...82,869,466
JBrowse link
G Rtn4rl1 reticulon 4 receptor-like 1 involved_in ISO (MGI:5824191|PMID:27339102) RGD PMID:27339102 MGI:5824191 NCBI chr10:60,043,246...60,116,977
Ensembl chr10:60,043,002...60,116,978
JBrowse link
G Rtn4rl2 reticulon 4 receptor-like 2 involved_in ISO (MGI:5824191|PMID:27339102) RGD PMID:27339102 MGI:5824191 NCBI chr 3:69,954,557...69,971,108
Ensembl chr 3:69,955,169...69,971,488
JBrowse link
G Ryk receptor-like tyrosine kinase involved_in ISO
ISS
(MGI:3625635|PMID:16723543)
GO_REF:0000024
RGD
UniProt
PMID:16723543 GO_REF:0000024 MGI:3625635 NCBI chr 8:103,419,348...103,492,083
Ensembl chr 8:103,419,275...103,491,698
JBrowse link
G Scn2a sodium voltage-gated channel alpha subunit 2 IEP RGD PMID:22473424 RGD:10411906 NCBI chr 3:50,302,781...50,437,504
Ensembl chr 3:50,302,877...50,437,214
JBrowse link
G Ulk4 unc-51 like kinase 4 acts_upstream_of_or_within ISO MGI:4362969 (MGI:5576843|PMID:24284070) RGD PMID:24284070 MGI:5576843 NCBI chr 8:120,670,879...120,966,026
Ensembl chr 8:120,670,866...120,966,924
JBrowse link
G Wdr37 WD repeat domain 37 acts_upstream_of_or_within ISO MGI:4452651 (MGI:6095492|PMID:29078390) RGD PMID:29078390 MGI:6095492 NCBI chr17:61,637,258...61,703,664
Ensembl chr17:61,637,258...61,703,677
JBrowse link
G Wdr47 WD repeat domain 47 acts_upstream_of_or_within ISO MGI:4433065 (MGI:6095492|PMID:29078390) RGD PMID:29078390 MGI:6095492 NCBI chr 2:196,226,757...196,287,739
Ensembl chr 2:196,205,238...196,287,739
JBrowse link
G Wdr89 WD repeat domain 89 acts_upstream_of_or_within ISO MGI:4944354 (MGI:6095492|PMID:29078390) RGD PMID:29078390 MGI:6095492 NCBI chr 6:94,350,468...94,382,085
Ensembl chr 6:94,350,303...94,382,026
JBrowse link
corpus callosum morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bhlhe22 basic helix-loop-helix family, member e22 acts_upstream_of_or_within ISO MGI:2684610|MGI:4440742|MGI:4440744 (MGI:5315201|PMID:22284184) RGD PMID:22284184 MGI:5315201 NCBI chr 2:100,486,400...100,489,510
Ensembl chr 2:100,486,400...100,489,510
JBrowse link
G Grcc10 gene rich cluster, C10 gene involved_in ISO (PMID:23453665), (PMID:23453666), (PMID:23633300), (PMID:24798461) RGD PMID:23453665 PMID:23453666 PMID:23633300 PMID:24798461 NCBI chr 4:157,551,276...157,552,924 JBrowse link
G Nin ninein acts_upstream_of_or_within ISO MGI:1344407 (MGI:5629993|PMID:25741725) RGD PMID:25741725 MGI:5629993 NCBI chr 6:88,525,405...88,627,710
Ensembl chr 6:88,525,742...88,627,639
JBrowse link
G Pafah1b1 platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 involved_in ISO (PMID:9063735) RGD PMID:9063735 NCBI chr10:59,533,042...59,591,808
Ensembl chr10:59,534,117...59,591,808
JBrowse link
G Prdm8 PR/SET domain 8 acts_upstream_of_or_within ISO MGI:5315763 (MGI:5315201|PMID:22284184) RGD PMID:22284184 MGI:5315201 NCBI chr14:11,403,202...11,424,059
Ensembl chr14:11,404,407...11,410,993
JBrowse link
G Szt2 SZT2 subunit of KICSTOR complex involved_in ISO (PMID:23932106) RGD PMID:23932106 NCBI chr 5:131,897,250...131,943,953
Ensembl chr 5:131,897,275...131,943,904
JBrowse link
G Tsku tsukushi, small leucine rich proteoglycan involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:4867728 (MGI:4848234|PMID:21055390)
Ensembl
RGD
PMID:21055390 GO_REF:0000107 MGI:4848234 NCBI chr 1:152,660,259...152,671,682
Ensembl chr 1:152,656,693...152,672,588
JBrowse link
G Zeb2 zinc finger E-box binding homeobox 2 acts_upstream_of_or_within ISO MGI:2387499|MGI:2668659 (MGI:5629993|PMID:25741725) RGD PMID:25741725 MGI:5629993 NCBI chr 3:29,219,765...29,342,094
Ensembl chr 3:29,218,301...29,345,157
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19903
    developmental process 7023
      anatomical structure development 6456
        corpus callosum development 37
          corpus callosum morphogenesis 8
Path 2
Term Annotations click to browse term
  biological_process 19903
    developmental process 7023
      anatomical structure development 6456
        multicellular organism development 5242
          system development 4503
            nervous system development 2812
              central nervous system development 1324
                brain development 1021
                  forebrain development 542
                    telencephalon development 373
                      corpus callosum development 37
                        corpus callosum morphogenesis 8
paths to the root