Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)

ONTOLOGY REPORT - ANNOTATIONS

Term:corpus callosum development
go back to main search page
Accession:GO:0022038 term browser browse the term
Definition:The process whose specific outcome is the progression of the corpus callosum over time, from its formation to the mature structure. The corpus callosum is a thick bundle of nerve fibers comprising a commissural plate connecting the two cerebral hemispheres. It consists of contralateral axon projections that provide communication between the right and left cerebral hemispheres.


show annotations for term's descendants           Sort by:
corpus callosum development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atg16l1 autophagy related 16-like 1 acts_upstream_of_or_within ISO
IEA		 MGI:4432181 (PMID:29078390)
GO_REF:0000107		 RGD
Ensembl		 PMID:29078390 GO_REF:0000107 NCBI chr 9:95,869,839...95,905,354
Ensembl chr 9:88,422,038...88,457,529 		JBrowse link
G Cacna1c calcium voltage-gated channel subunit alpha1 C IEP RGD PMID:22473424 RGD:10411906 NCBI chr 4:153,431,169...154,051,932
Ensembl chr 4:151,764,138...152,379,648 		JBrowse link
G Cdk5 cyclin-dependent kinase 5 acts_upstream_of_or_within ISO
IEA		 MGI:1928281|MGI:3043819 (PMID:18032654)
GO_REF:0000107		 RGD
Ensembl		 PMID:18032654 GO_REF:0000107 NCBI chr 4:11,647,098...11,651,606
Ensembl chr 4:10,754,687...10,760,112 		JBrowse link
G Coro1c coronin 1C acts_upstream_of_or_within ISO
IEA		 MGI:4419168 (PMID:29078390)
GO_REF:0000107		 RGD
Ensembl		 PMID:29078390 GO_REF:0000107 NCBI chr12:48,373,573...48,445,718
Ensembl chr12:42,712,991...42,785,179 		JBrowse link
G Dcc DCC netrin 1 receptor IEP RGD PMID:22473424 RGD:10411906 NCBI chr18:67,144,272...68,248,159
Ensembl chr18:64,873,898...65,972,740 		JBrowse link
G Dmxl2 Dmx-like 2 acts_upstream_of_or_within ISO MGI:4432280 (PMID:29078390) RGD PMID:29078390 NCBI chr 8:63,637,314...63,803,911
Ensembl chr 8:54,741,160...54,885,161 		JBrowse link
G Ephb2 Eph receptor B2 involved_in ISO
IEA		 (PMID:8947026)
GO_REF:0000107		 RGD
Ensembl		 PMID:8947026 GO_REF:0000107 NCBI chr 5:154,179,065...154,360,459
Ensembl chr 5:148,897,246...149,077,059 		JBrowse link
G Ephb3 Eph receptor B3 involved_in ISO
IEA		 (PMID:8947026)
GO_REF:0000107		 RGD
Ensembl		 PMID:8947026 GO_REF:0000107 NCBI chr11:93,345,098...93,363,775
Ensembl chr11:79,840,668...79,859,370 		JBrowse link
G Filip1 filamin A interacting protein 1 acts_upstream_of_or_within ISO
IEA		 (PMID:26655467)
GO_REF:0000107		 RGD
Ensembl		 PMID:26655467 GO_REF:0000107 NCBI chr 8:80,761,283...80,956,556
Ensembl chr 8:80,764,604...80,922,549 		JBrowse link
G Herc1 HECT and RLD domain containing E3 ubiquitin protein ligase family member 1 acts_upstream_of_or_within ISO
IEA		 MGI:6102914 (PMID:29078390)
GO_REF:0000107		 RGD
Ensembl		 PMID:29078390 GO_REF:0000107 NCBI chr 8:75,796,347...75,965,347
Ensembl chr 8:66,856,935...67,070,312 		JBrowse link
G Kcna1 potassium voltage-gated channel subfamily A member 1 IEP RGD PMID:22473424 RGD:10411906 NCBI chr 4:161,150,378...161,160,051
Ensembl chr 4:159,464,188...159,472,682 		JBrowse link
G Kcna2 potassium voltage-gated channel subfamily A member 2 IEP RGD PMID:22473424 RGD:10411906 NCBI chr 2:197,392,746...197,406,606
Ensembl chr 2:194,704,639...194,718,400 		JBrowse link
G Kcna3 potassium voltage-gated channel subfamily A member 3 IEP RGD PMID:22473424 RGD:10411906 NCBI chr 2:197,320,324...197,322,277
Ensembl chr 2:194,632,196...194,650,138 		JBrowse link
G Kcnc1 potassium voltage-gated channel subfamily C member 1 IEP RGD PMID:22473424 RGD:10411906 NCBI chr 1:106,039,247...106,081,034
Ensembl chr 1:96,902,953...96,944,744 		JBrowse link
G Kcnc3 potassium voltage-gated channel subfamily C member 3 IEP RGD PMID:22473424 RGD:10411906 NCBI chr 1:104,217,472...104,231,677
Ensembl chr 1:95,080,960...95,095,160 		JBrowse link
G Kcnc4 potassium voltage-gated channel subfamily C member 4 IEP RGD PMID:22473424 RGD:10411906 NCBI chr 2:197,747,095...197,788,467
Ensembl chr 2:195,071,769...195,099,233 		JBrowse link
G Kif21b kinesin family member 21B acts_upstream_of_or_within ISO MGI:4364527 (PMID:29078390) RGD PMID:29078390 NCBI chr13:47,576,129...47,626,112
Ensembl chr13:47,576,160...47,626,127 		JBrowse link
G Lpar1 lysophosphatidic acid receptor 1 IEP RGD PMID:9753172 RGD:2317716 NCBI chr 5:78,024,139...78,147,071
Ensembl chr 5:73,229,625...73,369,895 		JBrowse link
G Nsun5 NOP2/Sun RNA methyltransferase 5 involved_in ISO
IEA		 (PMID:31174389)
GO_REF:0000107		 RGD
Ensembl		 PMID:31174389 GO_REF:0000107 NCBI chr12:26,930,204...26,935,887
Ensembl chr12:21,293,645...21,299,272 		JBrowse link
G Ptprs protein tyrosine phosphatase, receptor type, S acts_upstream_of_or_within ISO MGI:2158734 (PMID:15842738) RGD PMID:15842738 NCBI chr 9:1,332,558...1,394,161
Ensembl chr 9:1,245,410...1,306,947 		JBrowse link
G Rpgrip1l Rpgrip1-like acts_upstream_of_or_within ISO MGI:3716208 (PMID:17558409) RGD PMID:17558409 NCBI chr19:31,865,050...31,957,930
Ensembl chr19:15,692,150...15,785,083 		JBrowse link
G Rtn4r reticulon 4 receptor involved_in ISS
ISO		 GO_REF:0000024
(PMID:27339102)		 UniProt
RGD		 PMID:27339102 GO_REF:0000024 NCBI chr11:96,348,613...96,373,554
Ensembl chr11:82,844,309...82,869,466 		JBrowse link
G Rtn4rl1 reticulon 4 receptor-like 1 involved_in IEA
ISO		 GO_REF:0000107
(PMID:27339102)		 Ensembl
RGD		 PMID:27339102 GO_REF:0000107 NCBI chr10:60,541,584...60,615,302
Ensembl chr10:60,043,002...60,116,978 		JBrowse link
G Rtn4rl2 reticulon 4 receptor-like 2 involved_in ISO
IEA		 (PMID:27339102)
GO_REF:0000107		 RGD
Ensembl		 PMID:27339102 GO_REF:0000107 NCBI chr 3:69,954,557...69,971,108
Ensembl chr 3:69,955,169...69,971,488 		JBrowse link
G Ryk receptor-like tyrosine kinase involved_in ISS
ISO		 GO_REF:0000024
(PMID:16723543)		 UniProt
RGD		 PMID:16723543 GO_REF:0000024 NCBI chr 8:112,298,158...112,370,912
Ensembl chr 8:103,419,275...103,491,698 		JBrowse link
G Scn2a sodium voltage-gated channel alpha subunit 2 IEP RGD PMID:22473424 RGD:10411906 NCBI chr 3:70,710,862...70,845,569
Ensembl chr 3:50,302,877...50,437,214 		JBrowse link
G Ulk4 unc-51 like kinase 4 acts_upstream_of_or_within ISO MGI:4362969 (PMID:24284070) RGD PMID:24284070 NCBI chr 8:129,548,431...129,843,555
Ensembl chr 8:120,670,866...120,966,924 		JBrowse link
G Wdr37 WD repeat domain 37 acts_upstream_of_or_within ISO MGI:4452651 (PMID:29078390) RGD PMID:29078390 NCBI chr17:66,547,425...66,613,841
Ensembl chr17:61,637,258...61,703,677 		JBrowse link
G Wdr47 WD repeat domain 47 acts_upstream_of_or_within ISO
IEA		 MGI:4433065 (PMID:29078390)
GO_REF:0000107		 RGD
Ensembl		 PMID:29078390 GO_REF:0000107 NCBI chr 2:198,914,977...198,975,844
Ensembl chr 2:196,205,238...196,287,739 		JBrowse link
G Wdr89 WD repeat domain 89 acts_upstream_of_or_within ISO
IEA		 MGI:4944354 (PMID:29078390)
GO_REF:0000107		 RGD
Ensembl		 PMID:29078390 GO_REF:0000107 NCBI chr 6:94,350,468...94,382,085
Ensembl chr 6:94,350,303...94,382,026 		JBrowse link
corpus callosum morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bhlhe22 basic helix-loop-helix family, member e22 acts_upstream_of_or_within ISO MGI:2684610|MGI:4440742|MGI:4440744 (PMID:22284184) RGD PMID:22284184 NCBI chr 2:102,402,622...102,405,732
Ensembl chr 2:100,486,400...100,489,510 		JBrowse link
G Grcc10 gene rich cluster, C10 gene involved_in ISO (PMID:23453665), (PMID:23453666), (PMID:23633300), (PMID:24798461) RGD PMID:23453665 PMID:23453666 PMID:23633300 PMID:24798461 NCBI chr 4:159,237,562...159,239,223 JBrowse link
G Nin ninein acts_upstream_of_or_within ISO
IEA		 MGI:1344407 (PMID:25741725)
GO_REF:0000107		 RGD
Ensembl		 PMID:25741725 GO_REF:0000107 NCBI chr 6:88,525,405...88,627,710
Ensembl chr 6:88,525,742...88,627,639 		JBrowse link
G Pafah1b1 platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 involved_in ISO
IEA		 (PMID:9063735)
GO_REF:0000107		 RGD
Ensembl		 PMID:9063735 GO_REF:0000107 NCBI chr10:60,031,441...60,090,259
Ensembl chr10:59,534,117...59,591,808 		JBrowse link
G Prdm8 PR/SET domain 8 acts_upstream_of_or_within ISO
IEA		 MGI:5315763 (PMID:22284184)
GO_REF:0000107		 RGD
Ensembl		 PMID:22284184 GO_REF:0000107 NCBI chr14:11,708,477...11,728,111
Ensembl chr14:11,404,407...11,410,993 		JBrowse link
G Szt2 SZT2 subunit of KICSTOR complex involved_in ISO
IEA		 (PMID:23932106)
GO_REF:0000107		 RGD
Ensembl		 PMID:23932106 GO_REF:0000107 NCBI chr 5:137,182,648...137,229,349
Ensembl chr 5:131,897,275...131,943,904 		JBrowse link
G Tsku tsukushi, small leucine rich proteoglycan acts_upstream_of_or_within ISO MGI:4867728 (PMID:21055390) RGD PMID:21055390 NCBI chr 1:162,071,459...162,082,972
Ensembl chr 1:152,656,693...152,672,588 		JBrowse link
G Zeb2 zinc finger E-box binding homeobox 2 acts_upstream_of_or_within ISO
IEA		 MGI:2387499|MGI:2668659 (PMID:25741725)
GO_REF:0000107		 RGD
Ensembl		 PMID:25741725 GO_REF:0000107 NCBI chr 3:49,624,028...49,754,323
Ensembl chr 3:29,218,301...29,345,157 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20567
    developmental process 7160
      anatomical structure development 6656
        corpus callosum development 38
          corpus callosum morphogenesis 8
Path 2
Term Annotations click to browse term
  biological_process 20567
    developmental process 7160
      anatomical structure development 6656
        multicellular organism development 5362
          system development 4644
            nervous system development 2881
              central nervous system development 1238
                brain development 912
                  forebrain development 564
                    telencephalon development 390
                      corpus callosum development 38
                        corpus callosum morphogenesis 8
paths to the root