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ONTOLOGY REPORT - ANNOTATIONS

Term:central nervous system neuron development
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Accession:GO:0021954 term browser browse the term
Definition:The process whose specific outcome is the progression of a neuron whose cell body is located in the central nervous system, from initial commitment of the cell to a neuronal fate, to the fully functional differentiated neuron.

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central nervous system neuron development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agtpbp1 ATP/GTP binding carboxypeptidase 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004936680:1,065,375...1,240,909
Ensembl chrNW_004936680:1,065,937...1,240,875 		JBrowse link
G Ascl1 achaete-scute family bHLH transcription factor 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004936492:11,315,929...11,317,166
Ensembl chrNW_004936492:11,316,417...11,317,166 		JBrowse link
G Atp7a ATPase copper transporting alpha acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004936683:2,874,022...2,936,214
Ensembl chrNW_004936683:2,874,042...2,935,040 		JBrowse link
G Brinp1 BMP/retinoic acid inducible neural specific 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936487:7,845,799...8,019,167
Ensembl chrNW_004936487:7,845,351...8,019,190 		JBrowse link
G Btg2 BTG anti-proliferation factor 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004936567:1,310,525...1,314,469
Ensembl chrNW_004936567:1,309,658...1,314,515 		JBrowse link
G Cdk5 cyclin dependent kinase 5 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004936527:6,478,934...6,483,848
Ensembl chrNW_004936527:6,478,982...6,483,866 		JBrowse link
G Fgf8 fibroblast growth factor 8 ISO development of dopaminergic neurons in the midbrain and serotonergic neurons in the rostral hindbrain RGD PMID:9630220 RGD:2289424 NCBI chrNW_004936600:4,004,847...4,010,626
Ensembl chrNW_004936600:4,004,824...4,010,689 		JBrowse link
G Fgfr1 fibroblast growth factor receptor 1 ISO RGD PMID:17314281 RGD:2325182 NCBI chrNW_004936710:1,760,365...1,815,269
Ensembl chrNW_004936710:1,760,089...1,815,508 		JBrowse link
G Foxg1 forkhead box G1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004936494:3,738,419...3,740,419
Ensembl chrNW_004936494:3,736,120...3,739,498 		JBrowse link
G Gabrb1 gamma-aminobutyric acid type A receptor subunit beta1 ISO RGD PMID:15158077 RGD:6480239 NCBI chrNW_004936482:13,219,962...13,593,868
Ensembl chrNW_004936482:13,220,236...13,586,209 		JBrowse link
G Gata2 GATA binding protein 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004936798:406,258...414,785
Ensembl chrNW_004936798:406,258...414,931 		JBrowse link
G Gba2 glucosylceramidase beta 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936524:3,730,833...3,742,526
Ensembl chrNW_004936524:3,730,833...3,742,531 		JBrowse link
G Hprt1 hypoxanthine phosphoribosyltransferase 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004936691:650,753...694,362
Ensembl chrNW_004936691:652,769...694,463 		JBrowse link
G Kiaa0319 KIAA0319 ortholog acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004936671:870,107...912,727
Ensembl chrNW_004936671:870,695...912,727 		JBrowse link
G Lep leptin acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004936479:15,394,966...15,411,334
Ensembl chrNW_004936479:15,394,966...15,411,334 		JBrowse link
G Lingo1 leucine rich repeat and Ig domain containing 1 acts_upstream_of_or_within ISO (PMID:17726113) MGI PMID:17726113 NCBI chrNW_004936471:34,657,073...34,729,662
Ensembl chrNW_004936471:34,706,198...34,731,037 		JBrowse link
G Lmx1b LIM homeobox transcription factor 1 beta acts_upstream_of_or_within ISO (PMID:17151281) MGI PMID:17151281 NCBI chrNW_004936487:14,513,303...14,587,771
Ensembl chrNW_004936487:14,513,290...14,587,902 		JBrowse link
G LOC101957772 BEN domain-containing protein 5 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:29,600,130...29,647,142
Ensembl chrNW_004936474:29,599,327...29,647,228 		JBrowse link
G Map2 microtubule associated protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936845:475,406...752,600
Ensembl chrNW_004936845:473,366...545,135 		JBrowse link
G Neurog2 neurogenin 2 acts_upstream_of_or_within ISO (PMID:16410412) MGI PMID:16410412 NCBI chrNW_004936563:3,348,052...3,350,623
Ensembl chrNW_004936563:3,348,052...3,350,623 		JBrowse link
G Nova2 NOVA alternative splicing regulator 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936706:2,261,737...2,282,922
Ensembl chrNW_004936706:2,261,904...2,274,339 		JBrowse link
G Npy neuropeptide Y involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936478:1,289,437...1,296,819
Ensembl chrNW_004936478:1,290,505...1,296,874 		JBrowse link
G Ntrk2 neurotrophic receptor tyrosine kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936680:267,850...621,467
Ensembl chrNW_004936680:267,596...615,928 		JBrowse link
G Pals1 protein associated with LIN7 1, MAGUK p55 family member involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936495:10,636,762...10,729,060
Ensembl chrNW_004936495:10,636,670...10,725,647 		JBrowse link
G Plxna1 plexin A1 involved_in IEA UniProt GO_REF:0000117 NCBI chrNW_004936798:951,138...989,955
Ensembl chrNW_004936798:952,428...989,894 		JBrowse link
G Plxna3 plexin A3 involved_in IEA UniProt GO_REF:0000117 NCBI chrNW_004936809:1,209,787...1,226,726
Ensembl chrNW_004936809:1,209,743...1,226,728 		JBrowse link
G Plxna4 plexin A4 involved_in IEA UniProt GO_REF:0000117 NCBI chrNW_004936579:3,025,251...3,449,347
Ensembl chrNW_004936579:3,092,924...3,444,012 		JBrowse link
G Taok1 TAO kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936538:5,531,639...5,668,119
Ensembl chrNW_004936538:5,531,633...5,659,239 		JBrowse link
G Ttc36 tetratricopeptide repeat domain 36 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004936542:3,567,469...3,571,393
Ensembl chrNW_004936542:3,566,876...3,571,504 		JBrowse link
anterior commissure morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bhlhe22 basic helix-loop-helix family member e22 acts_upstream_of_or_within ISO (PMID:22284184) MGI PMID:22284184 NCBI chrNW_004936496:9,085,894...9,087,623 JBrowse link
G Draxin dorsal inhibitory axon guidance protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:561,822...571,817
Ensembl chrNW_004936474:561,822...571,622 		JBrowse link
G Fbxo45 F-box protein 45 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004936784:1,162,950...1,177,407
Ensembl chrNW_004936784:1,162,950...1,179,068 		JBrowse link
G Nfib nuclear factor I B involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936539:7,763,036...8,185,001
Ensembl chrNW_004936539:7,769,413...7,985,316 		JBrowse link
G Nr2e1 nuclear receptor subfamily 2 group E member 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004936564:4,432,556...4,453,056
Ensembl chrNW_004936564:4,432,485...4,453,486 		JBrowse link
G Plxna4 plexin A4 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004936579:3,025,251...3,449,347
Ensembl chrNW_004936579:3,092,924...3,444,012 		JBrowse link
G Tsku tsukushi, small leucine rich proteoglycan acts_upstream_of_or_within
involved_in 		IEA
ISO 		(PMID:23206892) Ensembl
UniProt		 PMID:23206892 GO_REF:0000107 NCBI chrNW_004936498:5,434,912...5,487,354
Ensembl chrNW_004936498:5,434,911...5,447,147 		JBrowse link
G Wdr47 WD repeat domain 47 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004936704:543,189...603,488
Ensembl chrNW_004936704:543,196...603,488 		JBrowse link
central nervous system interneuron axonogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tctn1 tectonic family member 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004936558:3,552,909...3,581,212
Ensembl chrNW_004936558:3,552,864...3,581,368 		JBrowse link
central nervous system neuron axonogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arhgap35 Rho GTPase activating protein 35 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936664:714,036...788,584
Ensembl chrNW_004936664:713,984...789,344 		JBrowse link
G Arhgef28 Rho guanine nucleotide exchange factor 28 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004936549:2,685,953...2,977,754
Ensembl chrNW_004936549:2,686,941...2,932,203 		JBrowse link
G Atg7 autophagy related 7 acts_upstream_of_or_within ISO (PMID:20577052) MGI PMID:20577052 NCBI chrNW_004936602:1,938,720...2,179,239
Ensembl chrNW_004936602:1,935,507...2,179,256 		JBrowse link
G B4galt5 beta-1,4-galactosyltransferase 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936514:4,719,198...4,736,638
Ensembl chrNW_004936514:4,719,052...4,736,635 		JBrowse link
G B4galt6 beta-1,4-galactosyltransferase 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936682:1,535,617...1,590,723
Ensembl chrNW_004936682:1,535,586...1,593,827 		JBrowse link
G Chrnb2 cholinergic receptor nicotinic beta 2 subunit acts_upstream_of_or_within ISO (PMID:12097474) MGI PMID:12097474 NCBI chrNW_004936580:4,165,255...4,179,285
Ensembl chrNW_004936580:4,166,619...4,186,443 		JBrowse link
G Ndel1 nudE neurodevelopment protein 1 like 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004936595:1,656,956...1,692,775
Ensembl chrNW_004936595:1,656,956...1,689,322 		JBrowse link
G Prkca protein kinase C alpha ISO RGD PMID:18062921 RGD:2293300 NCBI chrNW_004936541:6,231,604...6,488,201
Ensembl chrNW_004936541:6,233,110...6,488,052 		JBrowse link
G Pten phosphatase and tensin homolog involved_in ISO (PMID:16675393) CACAO PMID:16675393 NCBI chrNW_004936735:1,252,414...1,338,318
Ensembl chrNW_004936735:1,252,414...1,338,323 		JBrowse link
G Ptk2 protein tyrosine kinase 2 acts_upstream_of_or_within ISO (PMID:15378065) MGI PMID:15378065 NCBI chrNW_004936470:10,379,855...10,578,531
Ensembl chrNW_004936470:10,379,872...10,578,543 		JBrowse link
central nervous system projection neuron axonogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bhlhe22 basic helix-loop-helix family member e22 acts_upstream_of_or_within ISO (PMID:22284184) MGI PMID:22284184 NCBI chrNW_004936496:9,085,894...9,087,623 JBrowse link
G Chrnb2 cholinergic receptor nicotinic beta 2 subunit acts_upstream_of_or_within ISO (PMID:15608630)
(PMID:11344259), (PMID:14687550) 		MGI PMID:11344259 PMID:14687550 PMID:15608630 NCBI chrNW_004936580:4,165,255...4,179,285
Ensembl chrNW_004936580:4,166,619...4,186,443 		JBrowse link
G Dclk1 doublecortin like kinase 1 acts_upstream_of_or_within ISO (PMID:16387638) MGI PMID:16387638 NCBI chrNW_004936472:29,958,716...30,287,798
Ensembl chrNW_004936472:29,964,218...30,287,841 		JBrowse link
G Dcx doublecortin acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004936499:3,905,262...4,004,457
Ensembl chrNW_004936499:3,903,376...4,005,508 		JBrowse link
G Ephb1 EPH receptor B1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004936529:8,006,780...8,261,923
Ensembl chrNW_004936529:7,839,768...8,261,942 		JBrowse link
G Ephb2 EPH receptor B2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:8,109,800...8,203,106
Ensembl chrNW_004936474:8,109,031...8,203,106 		JBrowse link
G Ephb3 EPH receptor B3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004936578:5,286,580...5,297,369
Ensembl chrNW_004936578:5,287,340...5,298,142 		JBrowse link
G Kifbp kinesin family binding protein involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936521:9,395,490...9,421,093
Ensembl chrNW_004936521:9,395,465...9,421,629 		JBrowse link
G Mycbp2 MYC binding protein 2 acts_upstream_of_or_within
involved_in 		IEA
ISO 		(PMID:17901218) Ensembl
UniProt		 PMID:17901218 GO_REF:0000107 NCBI chrNW_004936511:3,977,950...4,248,959
Ensembl chrNW_004936511:3,978,246...4,249,234 		JBrowse link
G Nr4a2 nuclear receptor subfamily 4 group A member 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004936469:21,912,118...21,920,486
Ensembl chrNW_004936469:21,912,047...21,920,486 		JBrowse link
G Prdm8 PR/SET domain 8 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004936749:1,819,491...1,827,440
Ensembl chrNW_004936749:1,820,235...1,823,714 		JBrowse link
G Sptbn4 spectrin beta, non-erythrocytic 4 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004936661:2,831,132...2,903,619
Ensembl chrNW_004936661:2,827,572...2,903,655 		JBrowse link
cerebellar neuron development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Crk CRK proto-oncogene, adaptor protein acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004936538:7,581,453...7,609,543
Ensembl chrNW_004936538:7,581,498...7,609,544 		JBrowse link
G Crkl CRK like proto-oncogene, adaptor protein acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004936619:2,447,686...2,479,589
Ensembl chrNW_004936619:2,447,614...2,479,805 		JBrowse link
G L1cam L1 cell adhesion molecule ISO RGD PMID:27027721 RGD:401959323 NCBI chrNW_004936809:736,385...768,822
Ensembl chrNW_004936809:736,319...761,973 		JBrowse link
G Samd4b sterile alpha motif domain containing 4B acts_upstream_of_or_within ISO (PMID:26609159) MGI PMID:26609159 NCBI chrNW_004936661:2,208,852...2,234,660
Ensembl chrNW_004936661:2,208,827...2,234,010 		JBrowse link
cerebral cortex GABAergic interneuron development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chrna2 cholinergic receptor nicotinic alpha 2 subunit part_of ISO RGD PMID:17046198 RGD:152995358 NCBI chrNW_004936675:327,501...334,493
Ensembl chrNW_004936675:327,501...334,581 		JBrowse link
G Rac1 Rac family small GTPase 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004936750:107,689...122,679
Ensembl chrNW_004936750:107,689...122,676 		JBrowse link
G Rac3 Rac family small GTPase 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004936594:5,527,788...5,530,694
Ensembl chrNW_004936594:5,528,908...5,531,420 		JBrowse link
cerebral cortex GABAergic interneuron migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arx aristaless related homeobox acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004936836:295,090...306,756
Ensembl chrNW_004936836:295,664...306,756 		JBrowse link
G Cntn2 contactin 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004936557:7,297,429...7,320,666
Ensembl chrNW_004936557:7,297,422...7,320,846 		JBrowse link
G Drd1 dopamine receptor D1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004936609:790,647...795,187
Ensembl chrNW_004936609:792,276...793,613 		JBrowse link
G Drd2 dopamine receptor D2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004936612:1,094,686...1,154,149
Ensembl chrNW_004936612:1,094,680...1,154,798 		JBrowse link
G Fezf2 FEZ family zinc finger 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004936637:4,045,224...4,051,058
Ensembl chrNW_004936637:4,047,119...4,052,741 		JBrowse link
G Lhx6 LIM homeobox 6 acts_upstream_of_or_within ISO (PMID:17376969) MGI PMID:17376969 NCBI chrNW_004936487:10,591,532...10,616,017
Ensembl chrNW_004936487:10,591,532...10,616,017 		JBrowse link
chemorepulsion involved in embryonic olfactory bulb interneuron precursor migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slit1 slit guidance ligand 1 NOT|involved_in ISO (PMID:11748139) UniProt PMID:11748139 NCBI chrNW_004936636:2,427,738...2,582,565
Ensembl chrNW_004936636:2,427,736...2,582,578 		JBrowse link
G Slit2 slit guidance ligand 2 NOT|involved_in ISO (PMID:11748139) UniProt PMID:11748139 NCBI chrNW_004936477:8,111,212...8,448,567
Ensembl chrNW_004936477:8,109,228...8,446,653 		JBrowse link
G Slit3 slit guidance ligand 3 NOT|involved_in ISO (PMID:11748139) UniProt PMID:11748139 NCBI chrNW_004936622:191,165...756,552
Ensembl chrNW_004936622:565,346...752,299 		JBrowse link
chemorepulsion involved in postnatal olfactory bulb interneuron migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Robo1 roundabout guidance receptor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936505:4,329,428...4,711,310
Ensembl chrNW_004936505:4,330,303...4,709,655 		JBrowse link
G Slit2 slit guidance ligand 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936477:8,111,212...8,448,567
Ensembl chrNW_004936477:8,109,228...8,446,653 		JBrowse link
corpus callosum morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bhlhe22 basic helix-loop-helix family member e22 acts_upstream_of_or_within ISO (PMID:22284184) MGI PMID:22284184 NCBI chrNW_004936496:9,085,894...9,087,623 JBrowse link
G CUNH12orf57 chromosome unknown C12orf57 homolog involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936709:884,741...886,617
Ensembl chrNW_004936709:884,741...886,895 		JBrowse link
G Nin ninein acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004936495:14,791,246...14,897,454
Ensembl chrNW_004936495:14,791,216...14,897,449 		JBrowse link
G Pafah1b1 platelet activating factor acetylhydrolase 1b regulatory subunit 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936538:8,612,142...8,693,698
Ensembl chrNW_004936538:8,612,049...8,694,015 		JBrowse link
G Prdm8 PR/SET domain 8 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004936749:1,819,491...1,827,440
Ensembl chrNW_004936749:1,820,235...1,823,714 		JBrowse link
G Szt2 SZT2 subunit of KICSTOR complex involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:24,788,175...24,837,471
Ensembl chrNW_004936474:24,788,195...24,837,395 		JBrowse link
G Tsku tsukushi, small leucine rich proteoglycan acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004936498:5,434,912...5,487,354
Ensembl chrNW_004936498:5,434,911...5,447,147 		JBrowse link
G Zeb2 zinc finger E-box binding homeobox 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004936469:32,240,730...32,372,413
Ensembl chrNW_004936469:32,240,835...32,371,267 		JBrowse link
corticospinal neuron axon guidance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Scn1b sodium voltage-gated channel beta subunit 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004936570:1,187,916...1,195,423
Ensembl chrNW_004936570:1,186,711...1,195,388 		JBrowse link
corticospinal neuron axon guidance through spinal cord term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slit2 slit guidance ligand 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936477:8,111,212...8,448,567
Ensembl chrNW_004936477:8,109,228...8,446,653 		JBrowse link
corticospinal tract morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bhlhe22 basic helix-loop-helix family member e22 acts_upstream_of_or_within ISO (PMID:22284184) MGI PMID:22284184 NCBI chrNW_004936496:9,085,894...9,087,623 JBrowse link
G Cdh11 cadherin 11 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004936475:15,513,402...15,662,330
Ensembl chrNW_004936475:15,511,804...15,662,330 		JBrowse link
G Epha4 EPH receptor A4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936569:3,539,269...3,670,322
Ensembl chrNW_004936569:3,540,053...3,670,348 		JBrowse link
G Fbxo45 F-box protein 45 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004936784:1,162,950...1,177,407
Ensembl chrNW_004936784:1,162,950...1,179,068 		JBrowse link
G Nin ninein acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004936495:14,791,246...14,897,454
Ensembl chrNW_004936495:14,791,216...14,897,449 		JBrowse link
G Prdm8 PR/SET domain 8 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004936749:1,819,491...1,827,440
Ensembl chrNW_004936749:1,820,235...1,823,714 		JBrowse link
G Spg11 SPG11 vesicle trafficking associated, spatacsin acts_upstream_of_or_within ISO (PMID:28237315) MGI PMID:28237315 NCBI chrNW_004936471:7,540,647...7,618,783 JBrowse link
G Zeb2 zinc finger E-box binding homeobox 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004936469:32,240,730...32,372,413
Ensembl chrNW_004936469:32,240,835...32,371,267 		JBrowse link
efferent axon development in a lateral line nerve term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Phox2b paired like homeobox 2B acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004936482:8,972,433...8,975,284
Ensembl chrNW_004936482:8,972,433...8,975,284 		JBrowse link
embryonic olfactory bulb interneuron precursor migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arx aristaless related homeobox acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004936836:295,090...306,756
Ensembl chrNW_004936836:295,664...306,756 		JBrowse link
G Rac1 Rac family small GTPase 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004936750:107,689...122,679
Ensembl chrNW_004936750:107,689...122,676 		JBrowse link
forebrain neuron development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgf8 fibroblast growth factor 8 ISO induction of dopaminergic neurons in the rostral forebrain RGD PMID:9630220 RGD:2289424 NCBI chrNW_004936600:4,004,847...4,010,626
Ensembl chrNW_004936600:4,004,824...4,010,689 		JBrowse link
G Gbx2 gastrulation brain homeobox 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004936525:1,870,211...1,873,536
Ensembl chrNW_004936525:1,870,195...1,873,539 		JBrowse link
G Lhx6 LIM homeobox 6 acts_upstream_of_or_within
involved_in 		ISO
IEA 		(PMID:15217369) MGI
UniProt
TreeGrafter		 PMID:15217369 GO_REF:0000117 GO_REF:0000118 NCBI chrNW_004936487:10,591,532...10,616,017
Ensembl chrNW_004936487:10,591,532...10,616,017 		JBrowse link
G Lhx8 LIM homeobox 8 acts_upstream_of_or_within
involved_in 		ISO
IEA 		(PMID:15217369) MGI
UniProt
TreeGrafter		 PMID:15217369 GO_REF:0000117 GO_REF:0000118 NCBI chrNW_004936571:2,326,851...2,352,428
Ensembl chrNW_004936571:2,326,920...2,351,779 		JBrowse link
G LOC101971998 guanine nucleotide-binding protein G(q) subunit alpha acts_upstream_of_or_within ISO (PMID:15340067) MGI PMID:15340067 NCBI chrNW_004936503:13,098,517...13,276,106
Ensembl chrNW_004936503:13,099,558...13,276,152 		JBrowse link
G Rapgef2 Rap guanine nucleotide exchange factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936576:5,583,847...5,746,583
Ensembl chrNW_004936576:5,583,805...5,746,671 		JBrowse link
G Secisbp2 SECIS binding protein 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004936780:264,366...300,999
Ensembl chrNW_004936780:264,329...301,091 		JBrowse link
G Tfap2a transcription factor AP-2 alpha acts_upstream_of_or_within ISO (PMID:10803593) MGI PMID:10803593 NCBI chrNW_004936534:2,481,804...2,518,573
Ensembl chrNW_004936534:2,481,806...2,499,317 		JBrowse link
gonadotrophin-releasing hormone neuronal migration to the hypothalamus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ndnf neuron derived neurotrophic factor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936662:593,848...624,974
Ensembl chrNW_004936662:594,331...624,980 		JBrowse link
G Nrp1 neuropilin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936574:1,694,433...1,834,720
Ensembl chrNW_004936574:1,694,336...1,834,720 		JBrowse link
G Nrp2 neuropilin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936631:2,106,378...2,222,082
Ensembl chrNW_004936631:2,106,453...2,222,088 		JBrowse link
G Plxna1 plexin A1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936798:951,138...989,955
Ensembl chrNW_004936798:952,428...989,894 		JBrowse link
G Plxna3 plexin A3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936809:1,209,787...1,226,726
Ensembl chrNW_004936809:1,209,743...1,226,728 		JBrowse link
G Sema3e semaphorin 3E involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936734:1,850,709...2,085,541
Ensembl chrNW_004936734:1,850,673...2,084,891 		JBrowse link
hypothalamus gonadotrophin-releasing hormone neuron development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nhlh2 nescient helix-loop-helix 2 acts_upstream_of_or_within_positive_effect IEA Ensembl GO_REF:0000107 NCBI chrNW_004936627:1,130,064...1,135,092
Ensembl chrNW_004936627:1,131,807...1,135,012 		JBrowse link
G Ubb ubiquitin B acts_upstream_of_or_within ISO (PMID:18299572) MGI PMID:18299572 NCBI chrNW_004936821:241,981...243,304 JBrowse link
olfactory bulb interneuron development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atf5 activating transcription factor 5 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004936664:3,713,527...3,717,824
Ensembl chrNW_004936664:3,713,527...3,717,824 		JBrowse link
G Robo1 roundabout guidance receptor 1 involved_in ISO (PMID:17360927) UniProt PMID:17360927 NCBI chrNW_004936505:4,329,428...4,711,310
Ensembl chrNW_004936505:4,330,303...4,709,655 		JBrowse link
G Robo2 roundabout guidance receptor 2 involved_in ISO (PMID:17360927) UniProt PMID:17360927 NCBI chrNW_004936505:5,544,011...6,747,417
Ensembl chrNW_004936505:5,548,164...6,094,225 		JBrowse link
G Sall3 spalt like transcription factor 3 acts_upstream_of_or_within ISO (PMID:18260139) MGI PMID:18260139 NCBI chrNW_004936616:903,220...922,635
Ensembl chrNW_004936616:901,076...922,641 		JBrowse link
G Wnt5a Wnt family member 5A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936473:6,031,627...6,052,211
Ensembl chrNW_004936473:6,029,976...6,052,159 		JBrowse link
postnatal olfactory bulb interneuron migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgfr1 fibroblast growth factor receptor 1 ISO RGD PMID:20083104 RGD:2325172 NCBI chrNW_004936710:1,760,365...1,815,269
Ensembl chrNW_004936710:1,760,089...1,815,508 		JBrowse link
pyramidal neuron development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atg7 autophagy related 7 acts_upstream_of_or_within ISO (PMID:16625205) MGI PMID:16625205 NCBI chrNW_004936602:1,938,720...2,179,239
Ensembl chrNW_004936602:1,935,507...2,179,256 		JBrowse link
G Atp7a ATPase copper transporting alpha acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004936683:2,874,022...2,936,214
Ensembl chrNW_004936683:2,874,042...2,935,040 		JBrowse link
G Dclk2 doublecortin like kinase 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004936689:272,136...428,145
Ensembl chrNW_004936689:272,130...426,078 		JBrowse link
G Dcx doublecortin acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004936499:3,905,262...4,004,457
Ensembl chrNW_004936499:3,903,376...4,005,508 		JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 involved_in ISO (PMID:20410112) UniProt PMID:20410112 NCBI chrNW_004936486:10,506,680...10,606,272
Ensembl chrNW_004936486:10,507,097...10,602,019 		JBrowse link
G LOC101970096 cytochrome b-c1 complex subunit 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936647:2,349,152...2,350,570
Ensembl chrNW_004936647:2,348,835...2,381,645 		JBrowse link
G Ogdh oxoglutarate dehydrogenase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936478:19,506,845...19,584,411
Ensembl chrNW_004936478:19,506,154...19,583,364 		JBrowse link
G Plxna3 plexin A3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004936809:1,209,787...1,226,726
Ensembl chrNW_004936809:1,209,743...1,226,728 		JBrowse link
G Scyl2 SCY1 like pseudokinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936492:13,502,854...13,564,886
Ensembl chrNW_004936492:13,501,663...13,564,867 		JBrowse link
G Slc4a10 solute carrier family 4 member 10 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004936469:17,068,179...17,349,563
Ensembl chrNW_004936469:17,068,175...17,349,782 		JBrowse link
pyramidal neuron migration to cerebral cortex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Disc1 DISC1 scaffold protein ISO RGD PMID:16299498 RGD:5509783 NCBI chrNW_004936484:19,151,752...19,237,435
Ensembl chrNW_004936484:19,047,215...19,237,306 		JBrowse link
G Foxg1 forkhead box G1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004936494:3,738,419...3,740,419
Ensembl chrNW_004936494:3,736,120...3,739,498 		JBrowse link
G Zmiz1 zinc finger MIZ-type containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936521:444,599...664,533
Ensembl chrNW_004936521:444,598...581,800 		JBrowse link
spinal cord ventral commissure morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adarb1 adenosine deaminase RNA specific B1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004936778:1,056,259...1,137,772
Ensembl chrNW_004936778:1,053,871...1,137,828 		JBrowse link
G Dcc DCC netrin 1 receptor acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004936497:10,122,078...11,169,900
Ensembl chrNW_004936497:10,122,617...11,169,803 		JBrowse link
G Gli2 GLI family zinc finger 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004936469:49,616,552...49,788,760
Ensembl chrNW_004936469:49,617,095...49,673,213 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17733
    cellular process 17274
      cellular developmental process 4463
        cell development 3159
          neuron development 1368
            central nervous system neuron development 111
              central nervous system neuron axonogenesis + 43
              cerebellar neuron development + 4
              forebrain neuron development + 45
Path 2
Term Annotations click to browse term
  biological_process 17733
    developmental process 6580
      anatomical structure development 6152
        multicellular organism development 4957
          system development 4324
            nervous system development 2710
              neurogenesis 2021
                generation of neurons 1746
                  neuron differentiation 1663
                    neuron development 1368
                      central nervous system neuron development 111
                        central nervous system neuron axonogenesis + 43
                        cerebellar neuron development + 4
                        forebrain neuron development + 45
paths to the root