ONTOLOGY REPORT - ANNOTATIONS
Term: neural tube development
Accession: GO:0021915
browse the term
Definition: The process whose specific outcome is the progression of the neural tube over time, from its formation to the mature structure. The mature structure of the neural tube exists when the tube has been segmented into the forebrain, midbrain, hindbrain and spinal cord regions. In addition neural crest has budded away from the epithelium.
G
Aldh1a2
aldehyde dehydrogenase 1 family, member A2
involved_in
ISO
(PMID:16237707)
RGD
PMID:16237707
NCBI chr 8:77,640,234...77,719,488
Ensembl chr 8:77,640,222...77,719,489
G
Ambra1
autophagy and beclin 1 regulator 1
ISO
MGI:3715977 (MGI:3715542|PMID:17589504)
RGD
PMID:17589504
MGI:3715542
NCBI chr 3:80,634,470...80,830,068
Ensembl chr 3:80,634,470...80,830,068
G
C2cd3
C2 domain containing 3 centriole elongation regulator
ISO
(MGI:3821640|PMID:19004860)
RGD
PMID:19004860
MGI:3821640
NCBI chr 1:165,382,279...165,480,088
Ensembl chr 1:165,382,690...165,479,655
G
Cecr2
CECR2, histone acetyl-lysine reader
ISO
MGI:3574034 (MGI:5295885|PMID:22045912)
RGD
PMID:22045912
MGI:5295885
NCBI chr 4:153,217,521...153,327,153
Ensembl chr 4:153,217,782...153,322,564
G
Dact1
dishevelled-binding antagonist of beta-catenin 1
involved_in
ISO
(PMID:22610794)
RGD
PMID:22610794
NCBI chr 6:93,740,440...93,751,003
Ensembl chr 6:93,740,586...93,749,809
G
Dchs1
dachsous cadherin-related 1
ISO
MGI:4867020 (MGI:4939936|PMID:21303848)
RGD
PMID:21303848
MGI:4939936
NCBI chr 1:170,594,981...170,629,062
Ensembl chr 1:170,594,822...170,628,915
G
Dvl1
dishevelled segment polarity protein 1
involved_in
ISO
(PMID:8817329)
RGD
PMID:8817329
NCBI chr 5:173,295,948...173,308,014
Ensembl chr 5:173,296,270...173,307,945
G
Epha2
Eph receptor A2
ISO
MGI:2448472 (MGI:1934524|PMID:11287184)
RGD
PMID:11287184
MGI:1934524
NCBI chr 5:159,845,773...159,874,203
Ensembl chr 5:159,845,774...159,874,206
G
Fkbp8
FKBP prolyl isomerase 8
ISO
MGI:3042750 (MGI:3806189|PMID:18590716)
RGD
PMID:18590716
MGI:3806189
NCBI chr16:20,645,956...20,652,890
Ensembl chr16:20,645,957...20,652,889
G
Gdf7
growth differentiation factor 7
ISO
MGI:2386906 (MGI:1353705|PMID:10693795)
RGD
PMID:10693795
MGI:1353705
NCBI chr 6:33,496,596...33,507,626
Ensembl chr 6:33,503,217...33,507,542
G
Gli2
GLI family zinc finger 2
ISO
MGI:3834146 (MGI:3833793|PMID:19056373)
RGD
PMID:19056373
MGI:3833793
NCBI chr13:34,829,021...35,049,172
Ensembl chr13:34,829,139...35,048,444
G
Gli3
GLI family zinc finger 3
ISO
MGI:1856276 (MGI:52587|PMID:8387379)
RGD
PMID:8387379
MGI:52587
NCBI chr17:52,294,942...52,569,036
Ensembl chr17:52,294,942...52,569,036
G
Grhl2
grainyhead-like transcription factor 2
involved_in
ISO IBA
MGI:4942413 (MGI:4943100|PMID:21377456) PMID:21873635
RGD
PMID:21377456 , PMID:21873635 , PMID:21873635
MGI:4943100 , RGD:13792537 , RGD:13792537
NCBI chr 7:76,058,623...76,197,360
Ensembl chr 7:76,059,386...76,197,856
G
Hes1
hes family bHLH transcription factor 1
ISO
MGI:104876|MGI:104877 (MGI:1855903|PMID:10804175), (MGI:2149154|PMID:11500373)
RGD
PMID:10804175 PMID:11500373
MGI:1855903 MGI:2149154
NCBI chr11:74,312,837...74,315,249
Ensembl chr11:74,312,806...74,315,248
G
Hes3
hes family bHLH transcription factor 3
ISO
MGI:104853 (MGI:2149154|PMID:11500373)
RGD
PMID:11500373
MGI:2149154
NCBI chr 5:169,463,196...169,469,795
Ensembl chr 5:169,464,989...169,467,153
G
Hes5
hes family bHLH transcription factor 5
involved_in
ISS ISO
GO_REF:0000024 MGI:104853 (MGI:1855903|PMID:10804175)
UniProt RGD
PMID:10804175
GO_REF:0000024 MGI:1855903
NCBI chr 5:172,364,421...172,365,188
Ensembl chr 5:172,364,421...172,365,188
G
Ift172
intraflagellar transport 172
ISO
MGI:2176180|MGI:4420980 (MGI:4420527|PMID:19521792)
RGD
PMID:19521792
MGI:4420527
NCBI chr 6:26,390,686...26,485,459
G
Inka1
inka box actin regulator 1
ISO
MGI:4438483 (MGI:4437492|PMID:20175189)
RGD
PMID:20175189
MGI:4437492
NCBI chr 8:116,763,149...116,764,839
Ensembl chr 8:116,763,001...116,764,780
G
Intu
inturned planar cell polarity protein
involved_in
IEA ISO
GO_REF:0000107 (MGI:5644615|PMID:25774014)
Ensembl RGD
PMID:25774014
GO_REF:0000107 MGI:5644615
NCBI chr 2:127,589,325...127,611,705
Ensembl chr 2:127,459,012...127,525,437
G
Itpk1
inositol-tetrakisphosphate 1-kinase
ISO
MGI:3587933 (MGI:3849649|PMID:19482943)
RGD
PMID:19482943
MGI:3849649
NCBI chr 6:126,448,920...126,582,188
Ensembl chr 6:126,450,139...126,582,134
G
Kdm6a
lysine demethylase 6A
ISO
MGI:4126347|MGI:5516011 (MGI:5515940|PMID:23028370)
RGD
PMID:23028370
MGI:5515940
NCBI chr X:4,805,493...4,945,788
Ensembl chr X:4,806,277...4,945,944
G
Kif3a
kinesin family member 3a
ISO
MGI:2181727 (MGI:1337724|PMID:10330409)
RGD
PMID:10330409
MGI:1337724
NCBI chr10:38,918,705...38,953,958
Ensembl chr10:38,918,748...38,952,785
G
Lrp6
LDL receptor related protein 6
ISO
MGI:98958 (MGI:4413372|PMID:19795512)
RGD
PMID:19795512
MGI:4413372
NCBI chr 4:168,194,054...168,323,962
Ensembl chr 4:168,194,927...168,323,751
G
Med12
mediator complex subunit 12
ISO
MGI:4839485 (MGI:4839544|PMID:20589884)
RGD
PMID:20589884
MGI:4839544
NCBI chr X:71,174,653...71,197,812
Ensembl chr X:71,174,699...71,197,812
G
Nf1
neurofibromin 1
involved_in
IEA ISO
GO_REF:0000107 MGI:97487 (MGI:1342174|PMID:10419687)
Ensembl RGD
PMID:10419687
GO_REF:0000107 MGI:1342174
NCBI chr10:66,732,460...66,928,706
Ensembl chr10:66,690,133...66,928,903
G
Nog
noggin
ISO
MGI:1862000 (MGI:1205964|PMID:9585504)
RGD
PMID:9585504
MGI:1205964
NCBI chr10:76,811,759...76,813,386
Ensembl chr10:76,811,759...76,813,386
G
Notch1
notch receptor 1
ISO
MGI:1857230 (MGI:72973|PMID:7789282)
RGD
PMID:7789282
MGI:72973
NCBI chr 3:3,905,562...3,951,015
Ensembl chr 3:3,905,453...3,951,025
G
Nup133
nucleoporin 133
ISO
MGI:3578539 (MGI:3798324|PMID:18539113)
RGD
PMID:18539113
MGI:3798324
NCBI chr19:56,681,965...56,731,404
Ensembl chr19:56,681,979...56,731,372
G
Pax3
paired box 3
ISO
MGI:97306 (MGI:1342174|PMID:10419687)
RGD
PMID:10419687
MGI:1342174
NCBI chr 9:84,004,004...84,101,226
Ensembl chr 9:84,005,183...84,101,172
G
Phgdh
phosphoglycerate dehydrogenase
ISO
MGI:3769591 (MGI:3835979|PMID:19114063)
RGD
PMID:19114063
MGI:3835979
NCBI chr 2:200,484,245...200,513,564
Ensembl chr 2:200,484,246...200,513,564
G
Pkd1
polycystin 1, transient receptor potential channel interacting
involved_in
ISO
(PMID:11891195)
RGD
PMID:11891195
NCBI chr10:13,914,057...13,962,008
Ensembl chr10:13,915,214...13,962,008
G
Pkd2
polycystin 2, transient receptor potential cation channel
involved_in
ISO
(PMID:11891195)
RGD
PMID:11891195
NCBI chr14:6,602,004...6,645,257
Ensembl chr14:6,602,004...6,645,257
G
Plod3
procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3
ISO
MGI:3620600|MGI:3620601 (MGI:3618677|PMID:16467571)
RGD
PMID:16467571
MGI:3618677
NCBI chr12:22,716,421...22,726,982
Ensembl chr12:22,716,423...22,726,982
G
Plxna2
plexin A2
ISO
(PMID:19666519)
RGD
PMID:19666519
NCBI chr13:113,373,569...113,570,774
Ensembl chr13:113,373,578...113,571,648
G
Sall1
spalt-like transcription factor 1
ISO
MGI:2139360 (MGI:3826724|PMID:18818376)
RGD
PMID:18818376
MGI:3826724
NCBI chr19:23,387,737...23,405,025
Ensembl chr19:23,389,375...23,405,039
G
Sall2
spalt-like transcription factor 2
ISO
MGI:3828110 (MGI:3826724|PMID:18818376)
RGD
PMID:18818376
MGI:3826724
NCBI chr15:28,728,471...28,746,042
Ensembl chr15:28,728,140...28,746,042
G
Sall4
spalt-like transcription factor 4
ISO
MGI:1354373|MGI:1889585 (MGI:3826724|PMID:18818376)
RGD
PMID:18818376
MGI:3826724
NCBI chr 3:165,520,155...165,538,176
Ensembl chr 3:165,520,392...165,537,940
G
Sema3c
semaphorin 3C
ISO
(PMID:19666519)
RGD
PMID:19666519
NCBI chr 4:14,318,276...14,490,438
Ensembl chr 4:14,318,274...14,490,446
G
Sfrp1
secreted frizzled-related protein 1
ISO
MGI:108078 (MGI:4429763|PMID:19850029)
RGD
PMID:19850029
MGI:4429763
NCBI chr16:73,372,007...73,410,777
Ensembl chr16:73,372,007...73,410,777
G
Sfrp2
secreted frizzled-related protein 2
ISO
MGI:892014 (MGI:4429763|PMID:19850029)
RGD
PMID:19850029
MGI:4429763
NCBI chr 2:182,723,732...182,731,277
Ensembl chr 2:182,723,854...182,731,764
G
Stil
STIL, centriolar assembly protein
ISO
MGI:2152962 (MGI:1339521|PMID:10385121)
RGD
PMID:10385121
MGI:1339521
NCBI chr 5:133,819,302...133,851,362
Ensembl chr 5:133,819,726...133,851,416
G
Tbc1d32
TBC1 domain family, member 32
ISO
MGI:4440463 (MGI:4439200|PMID:20159594)
RGD
PMID:20159594
MGI:4439200
NCBI chr20:37,463,879...37,701,268
Ensembl chr20:37,465,278...37,700,937
G
Tcf7
transcription factor 7
ISO
MGI:1202879 (MGI:3042541|PMID:15057272)
RGD
PMID:15057272
MGI:3042541
NCBI chr10:37,616,033...37,646,027
Ensembl chr10:37,617,279...37,645,802
G
Tcf7l2
transcription factor 7 like 2
ISO
MGI:98507 (MGI:3042541|PMID:15057272)
RGD
PMID:15057272
MGI:3042541
NCBI chr 1:276,686,911...276,730,517
Ensembl chr 1:276,659,542...276,730,514 Ensembl chr 1:276,659,542...276,730,514
G
Tgfb1
transforming growth factor, beta 1
ISO
(MGI:74339|PMID:7600998)
RGD
PMID:7600998
MGI:74339
NCBI chr 1:82,480,875...82,497,196
Ensembl chr 1:82,480,195...82,497,199
G
Trim71
tripartite motif containing 71
involved_in
ISS ISO
GO_REF:0000024 (MGI:5319563|PMID:22508726)
UniProt RGD
PMID:22508726
GO_REF:0000024 MGI:5319563
NCBI chr 8:122,553,015...122,604,787
Ensembl chr 8:122,553,015...122,604,787
G
Ttbk2
tau tubulin kinase 2
ISO
MGI:5496675 (MGI:5493390|PMID:23141541)
RGD
PMID:23141541
MGI:5493390
NCBI chr 3:112,677,932...112,789,615
Ensembl chr 3:112,684,152...112,789,289
G
Tulp3
TUB like protein 3
ISO
MGI:2388066 (MGI:3841503|PMID:19286674)
RGD
PMID:19286674
MGI:3841503
NCBI chr 4:161,636,084...161,677,807
Ensembl chr 4:161,637,892...161,658,519
G
Wnt5a
Wnt family member 5A
ISO
MGI:1298218 (MGI:4413372|PMID:19795512)
RGD
PMID:19795512
MGI:4413372
NCBI chr16:4,469,451...4,490,271
Ensembl chr16:4,469,468...4,489,860
G
Zfp36l1
zinc finger protein 36, C3H type-like 1
ISO
MGI:3050540 (MGI:3047495|PMID:15226444)
RGD
PMID:15226444
MGI:3047495
NCBI chr 6:103,308,032...103,313,074
Ensembl chr 6:103,308,045...103,313,074
G
Casp3
caspase 3
ISO IEA
MGI:5056374 (MGI:5050793|PMID:21515572) GO_REF:0000107
RGD Ensembl
PMID:21515572
GO_REF:0000107 MGI:5050793
NCBI chr16:48,845,011...48,863,249
Ensembl chr16:48,845,012...48,863,204
G
Folr1
folate receptor alpha
ISO
(MGI:3721767|PMID:17286298)
RGD
PMID:17286298
MGI:3721767
NCBI chr 1:166,934,457...166,945,864
Ensembl chr 1:166,934,460...166,943,592
G
Grhl2
grainyhead-like transcription factor 2
ISO IEA
MGI:5056365 (MGI:5050793|PMID:21515572) GO_REF:0000107
RGD Ensembl
PMID:21515572
GO_REF:0000107 MGI:5050793
NCBI chr 7:76,058,623...76,197,360
Ensembl chr 7:76,059,386...76,197,856
G
Specc1l
sperm antigen with calponin homology and coiled-coil domains 1-like
ISO
MGI:4124253|MGI:4128888 (MGI:6101898|PMID:26787558)
RGD
PMID:26787558
MGI:6101898
NCBI chr20:14,287,470...14,393,879
Ensembl chr20:14,287,457...14,393,793
G
Gatad2a
GATA zinc finger domain containing 2A
ISO
(MGI:3762244|PMID:17565372)
RGD
PMID:17565372
MGI:3762244
NCBI chr16:21,177,793...21,267,768
Ensembl chr16:21,178,138...21,268,504
G
Tfap2a
transcription factor AP-2 alpha
ISO
MGI:1888387 (MGI:80520|PMID:8622765)
RGD
PMID:8622765
MGI:80520
NCBI chr17:24,653,342...24,670,457
Ensembl chr17:24,654,902...24,670,457
G
Bmp4
bone morphogenetic protein 4
involved_in
IEA ISO
GO_REF:0000107 (MGI:3046395|PMID:15218525)
Ensembl RGD
PMID:15218525
GO_REF:0000107 MGI:3046395
NCBI chr15:20,776,060...20,791,013
Ensembl chr15:20,776,054...20,822,740
G
Fkbp8
FKBP prolyl isomerase 8
ISO
MGI:107689|MGI:3042750|MGI:3775614|MGI:95728 (MGI:3774974|PMID:18003640), (MGI:3806189|PMID:18590716)
RGD
PMID:18003640 PMID:18590716
MGI:3774974 MGI:3806189
NCBI chr16:20,645,956...20,652,890
Ensembl chr16:20,645,957...20,652,889
G
Foxa1
forkhead box A1
involved_in
IEA ISO
GO_REF:0000107 MGI:1347476 (MGI:5486225|PMID:23383217)
Ensembl RGD
PMID:23383217
GO_REF:0000107 MGI:5486225
NCBI chr 6:78,516,579...78,549,669
Ensembl chr 6:78,545,804...78,549,669
G
Foxa2
forkhead box A2
ISO
MGI:1347472|MGI:95841 (MGI:3806189|PMID:18590716), (MGI:5486225|PMID:23383217), (MGI:894511|PMID:9226455)
RGD
PMID:9226455 PMID:18590716 PMID:23383217
MGI:3806189 MGI:5486225 MGI:894511
NCBI chr 3:142,383,084...142,387,493
Ensembl chr 3:142,383,278...142,387,481
G
Gas1
growth arrest-specific 1
ISO
MGI:3711070|MGI:98297 (MGI:3710451|PMID:17504941), (MGI:3710452|PMID:17504940)
RGD
PMID:17504940 PMID:17504941
MGI:3710451 MGI:3710452
NCBI chr17:4,846,116...4,849,350
Ensembl chr17:4,846,789...4,847,940
G
Gli2
GLI family zinc finger 2
ISO
MGI:1857509 (MGI:3806189|PMID:18590716), (MGI:3841503|PMID:19286674), (MGI:894564|PMID:9247260)
RGD
PMID:9247260 PMID:18590716 PMID:19286674
MGI:3806189 MGI:3841503 MGI:894564
NCBI chr13:34,829,021...35,049,172
Ensembl chr13:34,829,139...35,048,444
G
Gsc
goosecoid homeobox
ISO
MGI:1347476 (MGI:894511|PMID:9226455)
RGD
PMID:9226455
MGI:894511
NCBI chr 6:128,147,181...128,149,220
Ensembl chr 6:128,147,181...128,149,220
G
Kif3a
kinesin family member 3a
ISO
MGI:1341070|MGI:1861960|MGI:95728 (MGI:3806189|PMID:18590716), (MGI:3841503|PMID:19286674), (MGI:4888042|PMID:21209331)
RGD
PMID:18590716 PMID:19286674 PMID:21209331
MGI:3806189 MGI:3841503 MGI:4888042
NCBI chr10:38,918,705...38,953,958
Ensembl chr10:38,918,748...38,952,785
G
Mnx1
motor neuron and pancreas homeobox 1
ISO
(MGI:3806189|PMID:18590716)
RGD
PMID:18590716
MGI:3806189
NCBI chr 4:2,376,350...2,381,308
Ensembl chr 4:2,376,958...2,381,271
G
Pax7
paired box 7
ISO
(MGI:3806189|PMID:18590716)
RGD
PMID:18590716
MGI:3806189
NCBI chr 5:158,211,001...158,313,510
Ensembl chr 5:158,214,616...158,313,426
G
Psen1
presenilin 1
ISO
MGI:109284 (MGI:1347695|PMID:10557208)
RGD
PMID:10557208
MGI:1347695
NCBI chr 6:107,169,514...107,221,000
Ensembl chr 6:107,169,528...107,216,798
G
Psen2
presenilin 2
ISO
MGI:1202717 (MGI:1347695|PMID:10557208)
RGD
PMID:10557208
MGI:1347695
NCBI chr13:98,513,600...98,539,347
Ensembl chr13:98,513,570...98,530,724
G
Ptch1
patched 1
ISO
MGI:1857447 (MGI:1095757|PMID:9262482)
RGD
PMID:9262482
MGI:1095757
NCBI chr17:1,032,242...1,085,885
Ensembl chr17:1,029,048...1,093,873
G
Rab23
RAB23, member RAS oncogene family
ISO
(MGI:69552|PMID:7720556)
RGD
PMID:7720556
MGI:69552
NCBI chr 9:38,469,784...38,496,185
Ensembl chr 9:38,470,298...38,495,176
G
Rnf220
ring finger protein 220
ISO
MGI:6393918 (MGI:6220747|PMID:30177510)
RGD
PMID:30177510
MGI:6220747
NCBI chr 5:136,129,457...136,351,752
Ensembl chr 5:136,129,425...136,166,786
G
Shh
sonic hedgehog signaling molecule
involved_in
IEA ISO
GO_REF:0000107 MGI:95655 (MGI:3710017|PMID:17442700), (MGI:3710451|PMID:17504941), (MGI:3806189|PMID:18590716), (MGI:4888042|PMID:21209331)
Ensembl RGD
PMID:17442700 PMID:17504941 PMID:18590716 PMID:21209331
GO_REF:0000107 MGI:3710017 MGI:3710451 MGI:3806189 MGI:4888042
NCBI chr 4:718,538...727,691
Ensembl chr 4:718,538...727,691
G
Smo
smoothened, frizzled class receptor
involved_in
IEA ISO
GO_REF:0000107 MGI:2176255 (MGI:3806189|PMID:18590716)
Ensembl RGD
PMID:18590716
GO_REF:0000107 MGI:3806189
NCBI chr 4:57,019,941...57,041,779
Ensembl chr 4:57,019,941...57,042,770
G
Tctn1
tectonic family member 1
ISO
MGI:3716885 (MGI:3610767|PMID:16357211)
RGD
PMID:16357211
MGI:3610767
NCBI chr12:39,790,948...39,828,215
Ensembl chr12:39,790,965...39,824,064
G
Tulp3
TUB like protein 3
ISO
MGI:2388066 (MGI:3841503|PMID:19286674)
RGD
PMID:19286674
MGI:3841503
NCBI chr 4:161,636,084...161,677,807
Ensembl chr 4:161,637,892...161,658,519
G
Wnt3a
Wnt family member 3A
ISO
MGI:1857489 (MGI:64780|PMID:8299937)
RGD
PMID:8299937
MGI:64780
NCBI chr10:45,598,898...45,643,151
Ensembl chr10:45,598,912...45,638,035
G
Cthrc1
collagen triple helix repeat containing 1
ISO
MGI:1915838 (MGI:3814781|PMID:18606138)
RGD
PMID:18606138
MGI:3814781
NCBI chr 7:77,966,722...77,977,004
Ensembl chr 7:77,966,722...77,977,004
G
Vangl2
VANGL planar cell polarity protein 2
ISO
MGI:1857642 (MGI:3814781|PMID:18606138)
RGD
PMID:18606138
MGI:3814781
NCBI chr13:90,379,203...90,405,627
Ensembl chr13:90,380,632...90,405,591
G
Cby1
chibby family member 1, beta catenin antagonist
ISO
MGI:1919757 (MGI:6149643|PMID:29487109)
RGD
PMID:29487109
MGI:6149643
NCBI chr 7:120,891,930...120,898,318
Ensembl chr 7:120,891,940...120,897,687
G
Cobl
cordon-bleu WH2 repeat protein
involved_in
ISO IEA
(PMID:7586755) GO_REF:0000107
RGD Ensembl
PMID:7586755
GO_REF:0000107
NCBI chr14:92,341,949...92,497,169
Ensembl chr14:92,342,957...92,577,936
G
Dzip1l
DAZ interacting zinc finger protein 1-like
ISO
MGI:1920989 (MGI:6149643|PMID:29487109)
RGD
PMID:29487109
MGI:6149643
NCBI chr 8:107,875,659...107,916,298
Ensembl chr 8:107,875,991...107,916,294
G
Ferd3l
Fer3-like bHLH transcription factor
ISO
MGI:4460989 (MGI:4454589|PMID:20460368)
RGD
PMID:20460368
MGI:4454589
NCBI chr 6:53,371,706...53,372,596
Ensembl chr 6:53,371,706...53,372,584
G
Foxb1
forkhead box B1
involved_in
ISS ISO
GO_REF:0000024 (MGI:3771770|PMID:18064677)
UniProt RGD
PMID:18064677
GO_REF:0000024 MGI:3771770
NCBI chr 8:75,992,751...75,995,371
Ensembl chr 8:75,992,755...75,995,371
G
Stil
STIL, centriolar assembly protein
ISO
MGI:2152962 (MGI:1339521|PMID:10385121)
RGD
PMID:10385121
MGI:1339521
NCBI chr 5:133,819,302...133,851,362
Ensembl chr 5:133,819,726...133,851,416
G
Cdk20
cyclin-dependent kinase 20
ISO
MGI:6113512 (MGI:5912686|PMID:28817564)
RGD
PMID:28817564
MGI:5912686
NCBI chr17:1,935,900...1,942,867
Ensembl chr17:1,936,163...1,942,865
G
Cluap1
clusterin associated protein 1
involved_in
ISO IEA
MGI:4363468 (MGI:5488668|PMID:23351563) GO_REF:0000107
RGD Ensembl
PMID:23351563
GO_REF:0000107 MGI:5488668
NCBI chr10:11,847,058...11,878,792
Ensembl chr10:11,847,102...11,878,792
G
Gli2
GLI family zinc finger 2
ISO
MGI:1857509 (MGI:1276795|PMID:9636069), (MGI:1277040|PMID:9655799)
RGD
PMID:9636069 PMID:9655799
MGI:1276795 MGI:1277040
NCBI chr13:34,829,021...35,049,172
Ensembl chr13:34,829,139...35,048,444
G
Nodal
nodal growth differentiation factor
ISO
MGI:2158732 (MGI:2155575|PMID:11311163)
RGD
PMID:11311163
MGI:2155575
NCBI chr20:31,035,729...31,044,096
Ensembl chr20:31,035,729...31,044,096
G
Pax6
paired box 6
involved_in
IEA ISO
GO_REF:0000107 MGI:1856155|MGI:1856158 (MGI:892757|PMID:9169845)
Ensembl RGD
PMID:9169845
GO_REF:0000107 MGI:892757
NCBI chr 3:95,700,241...95,728,682
Ensembl chr 3:95,707,386...95,728,624
G
Kdm2b
lysine demethylase 2B
ISO
(MGI:4949568|PMID:21220025)
RGD
PMID:21220025
MGI:4949568
NCBI chr12:39,021,924...39,161,954
Ensembl chr12:39,078,119...39,161,956
G
En1
engrailed homeobox 1
ISO
MGI:1857163 (MGI:3525936|PMID:15607945)
RGD
PMID:15607945
MGI:3525936
NCBI chr13:36,532,758...36,537,888
Ensembl chr13:36,532,758...36,537,093
G
Fgf8
fibroblast growth factor 8
ISO
MGI:2150347 (MGI:3720541|PMID:17601531)
RGD
PMID:17601531
MGI:3720541
NCBI chr 1:265,492,949...265,498,965
Ensembl chr 1:265,493,124...265,498,831
G
Gbx2
gastrulation brain homeobox 2
ISO
MGI:1857634 (MGI:3624192|PMID:16651541)
RGD
PMID:16651541
MGI:3624192
NCBI chr 9:97,063,265...97,065,855
Ensembl chr 9:97,063,728...97,065,817
G
Lrp6
LDL receptor related protein 6
involved_in
ISO IBA
MGI:2156191 (MGI:1891551|PMID:11029008), (MGI:4413372|PMID:19795512) PMID:21873635
RGD
PMID:11029008 PMID:19795512 , PMID:21873635 , PMID:21873635
MGI:1891551 MGI:4413372 , RGD:13792537 , RGD:13792537
NCBI chr 4:168,194,054...168,323,962
Ensembl chr 4:168,194,927...168,323,751
G
Wnt1
Wnt family member 1
ISO
MGI:1857490 (MGI:59176|PMID:2205396)
RGD
PMID:2205396
MGI:59176
NCBI chr 7:140,464,999...140,469,046
Ensembl chr 7:140,464,999...140,469,046
G
Ssbp3
single stranded DNA binding protein 3
IEA ISO
GO_REF:0000107 (MGI:3578570|PMID:15857913)
Ensembl RGD
PMID:15857913
GO_REF:0000107 MGI:3578570
NCBI chr 5:126,511,339...126,649,830
Ensembl chr 5:126,511,350...126,648,661
G
Wnt1
Wnt family member 1
ISO
MGI:1856382 (MGI:76584|PMID:8555108)
RGD
PMID:8555108
MGI:76584
NCBI chr 7:140,464,999...140,469,046
Ensembl chr 7:140,464,999...140,469,046
G
Gbx2
gastrulation brain homeobox 2
ISO
MGI:1857634 (MGI:3624192|PMID:16651541)
RGD
PMID:16651541
MGI:3624192
NCBI chr 9:97,063,265...97,065,855
Ensembl chr 9:97,063,728...97,065,817
G
Hes1
hes family bHLH transcription factor 1
involved_in
IEA ISO
GO_REF:0000107 MGI:104877 (MGI:2149154|PMID:11500373)
Ensembl RGD
PMID:11500373
GO_REF:0000107 MGI:2149154
NCBI chr11:74,312,837...74,315,249
Ensembl chr11:74,312,806...74,315,248
G
Hes3
hes family bHLH transcription factor 3
ISO
MGI:104853 (MGI:2149134|PMID:11522634)
RGD
PMID:11522634
MGI:2149134
NCBI chr 5:169,463,196...169,469,795
Ensembl chr 5:169,464,989...169,467,153
G
Kdm2b
lysine demethylase 2B
ISO
(MGI:4949568|PMID:21220025)
RGD
PMID:21220025
MGI:4949568
NCBI chr12:39,021,924...39,161,954
Ensembl chr12:39,078,119...39,161,956
G
Lrp6
LDL receptor related protein 6
ISO
MGI:98958 (MGI:4830282|PMID:19056682)
RGD
PMID:19056682
MGI:4830282
NCBI chr 4:168,194,054...168,323,962
Ensembl chr 4:168,194,927...168,323,751
G
Cdk20
cyclin-dependent kinase 20
ISO
MGI:108075|MGI:99833 (MGI:5912686|PMID:28817564)
RGD
PMID:28817564
MGI:5912686
NCBI chr17:1,935,900...1,942,867
Ensembl chr17:1,936,163...1,942,865
G
Gpr161
G protein-coupled receptor 161
ISO
(MGI:5468365|PMID:23332756)
RGD
PMID:23332756
MGI:5468365
NCBI chr13:83,530,389...83,576,117
Ensembl chr13:83,531,018...83,571,505
G
Prkaca
protein kinase cAMP-activated catalytic subunit alpha
involved_in
IEA ISO
GO_REF:0000107 MGI:97760 (MGI:5308523|PMID:22007132)
Ensembl RGD
PMID:22007132
GO_REF:0000107 MGI:5308523
NCBI chr19:25,095,089...25,118,869
Ensembl chr19:25,095,089...25,118,860
G
Prkacb
protein kinase cAMP-activated catalytic subunit beta
ISO
MGI:97592 (MGI:5308523|PMID:22007132)
RGD
PMID:22007132
MGI:5308523
NCBI chr 2:252,602,197...252,691,886
Ensembl chr 2:252,605,307...252,691,886
G
Sufu
SUFU negative regulator of hedgehog signaling
ISO
MGI:4840420 (MGI:4355593|PMID:19684112)
RGD
PMID:19684112
MGI:4355593
NCBI chr 1:266,143,766...266,241,742
Ensembl chr 1:266,143,818...266,239,016
G
Traf3ip1
TRAF3 interacting protein 1
ISO
MGI:4129326 (MGI:5298450|PMID:21945076)
RGD
PMID:21945076
MGI:5298450
NCBI chr 9:98,621,499...98,658,223
Ensembl chr 9:98,621,506...98,656,901
G
Tulp3
TUB like protein 3
ISO
MGI:2388066 (MGI:3844764|PMID:19334287)
RGD
PMID:19334287
MGI:3844764
NCBI chr 4:161,636,084...161,677,807
Ensembl chr 4:161,637,892...161,658,519
G
Luzp1
leucine zipper protein 1
involved_in
IEA IBA ISO
GO_REF:0000107 PMID:21873635 MGI:3818454 (MGI:3818102|PMID:18801334)
Ensembl RGD
PMID:18801334 , PMID:21873635 , PMID:21873635
GO_REF:0000107 MGI:3818102 , RGD:13792537 , RGD:13792537
NCBI chr 5:154,831,697...154,907,646
Ensembl chr 5:154,868,534...154,907,634
G
Bmp5
bone morphogenetic protein 5
ISO
UniProtKB:P23359 (MGI:1332253|PMID:10079236)
RGD
PMID:10079236
MGI:1332253
NCBI chr 8:82,669,466...82,950,273
Ensembl chr 8:82,878,941...82,950,273
G
Bmp7
bone morphogenetic protein 7
ISO
UniProtKB:P49003 (MGI:1332253|PMID:10079236)
RGD
PMID:10079236
MGI:1332253
NCBI chr 3:170,879,972...170,955,820
Ensembl chr 3:170,879,973...170,955,399
G
Hif1a
hypoxia inducible factor 1 subunit alpha
involved_in
IEA ISO
GO_REF:0000107 MGI:1857719 (MGI:1337194|PMID:10328919)
Ensembl RGD
PMID:10328919
GO_REF:0000107 MGI:1337194
NCBI chr 6:96,810,868...96,856,303
Ensembl chr 6:96,810,907...96,856,052
G
Cecr2
CECR2, histone acetyl-lysine reader
ISO
MGI:3574034 (MGI:4880797|PMID:21246654)
RGD
PMID:21246654
MGI:4880797
NCBI chr 4:153,217,521...153,327,153
Ensembl chr 4:153,217,782...153,322,564
G
Cfl1
cofilin 1
ISO
MGI:3574399 (MGI:3530675|PMID:15649475)
RGD
PMID:15649475
MGI:3530675
NCBI chr 1:220,869,805...220,873,337
Ensembl chr 1:220,869,805...220,873,337
G
Gatad2a
GATA zinc finger domain containing 2A
ISO
(MGI:3762244|PMID:17565372)
RGD
PMID:17565372
MGI:3762244
NCBI chr16:21,177,793...21,267,768
Ensembl chr16:21,178,138...21,268,504
G
Nodal
nodal growth differentiation factor
ISO
MGI:2158732 (MGI:2155575|PMID:11311163)
RGD
PMID:11311163
MGI:2155575
NCBI chr20:31,035,729...31,044,096
Ensembl chr20:31,035,729...31,044,096
G
Ovol2
ovo-like zinc finger 2
ISO
MGI:3522498 (MGI:3618450|PMID:16423343)
RGD
PMID:16423343
MGI:3618450
NCBI chr 3:138,433,990...138,464,511
Ensembl chr 3:138,433,990...138,462,063
G
Abl1
ABL proto-oncogene 1, non-receptor tyrosine kinase
ISO
MGI:87860 (MGI:1327082|PMID:9883720)
RGD
PMID:9883720
MGI:1327082
NCBI chr 3:10,041,820...10,145,076
Ensembl chr 3:10,041,826...10,144,388
G
Abl2
ABL proto-oncogene 2, non-receptor tyrosine kinase
ISO
MGI:87859 (MGI:1327082|PMID:9883720)
RGD
PMID:9883720
MGI:1327082
NCBI chr13:74,154,533...74,333,244
Ensembl chr13:74,154,835...74,333,244
G
Adm
adrenomedullin
ISO
MGI:2176598 (MGI:3689296|PMID:16981008)
RGD
PMID:16981008
MGI:3689296
NCBI chr 1:175,443,189...175,447,260
Ensembl chr 1:175,445,088...175,447,259
G
Alx1
ALX homeobox 1
ISO
MGI:1857553 (MGI:81193|PMID:8673125)
RGD
PMID:8673125
MGI:81193
NCBI chr 7:44,751,865...44,771,458
Ensembl chr 7:44,751,873...44,771,458
G
Apaf1
apoptotic peptidase activating factor 1
ISO
MGI:1888997 (MGI:2149166|PMID:11504943), (MGI:893797|PMID:9216040)
RGD
PMID:9216040 PMID:11504943
MGI:2149166 MGI:893797
NCBI chr 7:31,699,309...31,784,192
Ensembl chr 7:31,699,885...31,784,192
G
Arhgap35
Rho GTPase activating protein 35
involved_in
IEA ISO
GO_REF:0000107 MGI:2448591 (MGI:1926242|PMID:11044403)
Ensembl RGD
PMID:11044403
GO_REF:0000107 MGI:1926242
NCBI chr 1:78,456,409...78,573,374
Ensembl chr 1:78,456,409...78,573,374
G
Arid1a
AT-rich interaction domain 1A
ISO
MGI:5469314 (MGI:5466629|PMID:23129809)
RGD
PMID:23129809
MGI:5466629
NCBI chr 5:151,904,687...151,977,973
Ensembl chr 5:151,904,684...151,977,636
G
Bbs4
Bardet-Biedl syndrome 4
ISO
MGI:3055492 (MGI:3607949|PMID:16170314)
RGD
PMID:16170314
MGI:3607949
NCBI chr 8:64,115,005...64,154,432
Ensembl chr 8:64,121,392...64,154,396
G
Bcl10
BCL10, immune signaling adaptor
involved_in
ISS ISO
PMID:11163238 (MGI:1930354|PMID:11163238)
RGD
PMID:11163238 , PMID:11163238 , PMID:11163238
MGI:1930354 , RGD:734638 , RGD:734638
NCBI chr 2:251,805,392...251,814,957
Ensembl chr 2:251,805,392...251,814,957
G
Bmp4
bone morphogenetic protein 4
involved_in
IEA ISO
GO_REF:0000107 (MGI:4429763|PMID:19850029)
Ensembl RGD
PMID:19850029
GO_REF:0000107 MGI:4429763
NCBI chr15:20,776,060...20,791,013
Ensembl chr15:20,776,054...20,822,740
G
Brd2
bromodomain containing 2
involved_in
IEA
GO_REF:0000107
Ensembl
GO_REF:0000107
NCBI chr20:3,910,555...3,921,074
Ensembl chr20:3,910,555...3,917,426 Ensembl chr20:3,910,555...3,917,426
G
Cc2d2a
coiled-coil and C2 domain containing 2A
ISO
MGI:5708063 (MGI:5696765|PMID:24947469)
RGD
PMID:24947469
MGI:5696765
NCBI chr14:71,895,128...71,979,452
Ensembl chr14:71,895,246...71,973,419
G
Cdk20
cyclin-dependent kinase 20
ISO
MGI:6113512 (MGI:5912686|PMID:28817564)
RGD
PMID:28817564
MGI:5912686
NCBI chr17:1,935,900...1,942,867
Ensembl chr17:1,936,163...1,942,865
G
Cecr2
CECR2, histone acetyl-lysine reader
ISO
MGI:2135272|MGI:3574034|MGI:4829945 (MGI:3530173|PMID:15640247), (MGI:4822542|PMID:20589882), (MGI:4880797|PMID:21246654)
RGD
PMID:15640247 PMID:20589882 PMID:21246654
MGI:3530173 MGI:4822542 MGI:4880797
NCBI chr 4:153,217,521...153,327,153
Ensembl chr 4:153,217,782...153,322,564
G
Celsr1
cadherin, EGF LAG seven-pass G-type receptor 1
ISO
MGI:107926|MGI:2135272 (MGI:2667273|PMID:12842012), (MGI:3703464|PMID:17229766)
RGD
PMID:12842012 PMID:17229766
MGI:2667273 MGI:3703464
NCBI chr 7:126,774,010...126,914,085
Ensembl chr 7:126,775,516...126,913,585
G
Cited2
Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2
ISO
MGI:2385355 (MGI:2384266|PMID:12149478)
RGD
PMID:12149478
MGI:2384266
NCBI chr 1:12,823,363...12,825,806
Ensembl chr 1:12,823,363...12,825,786
G
Cluap1
clusterin associated protein 1
involved_in
ISO IEA
MGI:5523142 (MGI:5509110|PMID:23742838) GO_REF:0000107
RGD Ensembl
PMID:23742838
GO_REF:0000107 MGI:5509110
NCBI chr10:11,847,058...11,878,792
Ensembl chr10:11,847,102...11,878,792
G
Cobl
cordon-bleu WH2 repeat protein
involved_in
IEA ISO
GO_REF:0000107 MGI:2135272 (MGI:2676511|PMID:14512015)
Ensembl RGD
PMID:14512015
GO_REF:0000107 MGI:2676511
NCBI chr14:92,341,949...92,497,169
Ensembl chr14:92,342,957...92,577,936
G
Deaf1
DEAF1 transcription factor
ISS ISO
GO_REF:0000024 (MGI:3029622|PMID:14966286)
UniProt RGD
PMID:14966286
GO_REF:0000024 MGI:3029622
NCBI chr 1:214,283,787...214,317,466
Ensembl chr 1:214,283,790...214,317,466
G
Dlc1
DLC1 Rho GTPase activating protein
ISO
MGI:3529997 (MGI:3529660|PMID:15710412)
RGD
PMID:15710412
MGI:3529660
NCBI chr16:58,776,489...59,247,752
Ensembl chr16:59,077,574...59,247,754
G
Dvl2
dishevelled segment polarity protein 2
ISO
MGI:2429760 (MGI:2389015|PMID:12421720)
RGD
PMID:12421720
MGI:2389015
NCBI chr10:56,609,810...56,619,269
Ensembl chr10:56,610,051...56,619,269
G
Enah
ENAH, actin regulator
ISO
MGI:109268|MGI:97549 (MGI:1331576|PMID:10069337), (MGI:3054149|PMID:15371503)
RGD
PMID:10069337 PMID:15371503
MGI:1331576 MGI:3054149
NCBI chr13:100,297,421...100,415,335
Ensembl chr13:100,300,054...100,414,226
G
Fuz
fuzzy planar cell polarity protein
involved_in
ISO ISS
(PMID:21840926) GO_REF:0000024 MGI:4346364 (MGI:4367921|PMID:19877275), (MGI:4438317|PMID:19767740), (MGI:5296277|PMID:21840926)
RGD UniProt
PMID:19767740 PMID:19877275 PMID:21840926
GO_REF:0000024 MGI:4367921 MGI:4438317 MGI:5296277
NCBI chr 1:100,891,832...100,896,811
Ensembl chr 1:100,891,866...100,896,807
G
Fzd3
frizzled class receptor 3
ISO
MGI:108474 (MGI:3616416|PMID:16495441)
RGD
PMID:16495441
MGI:3616416
NCBI chr15:48,601,259...48,670,257
Ensembl chr15:48,601,266...48,670,257
G
Fzd6
frizzled class receptor 6
ISO
MGI:108476 (MGI:3616416|PMID:16495441)
RGD
PMID:16495441
MGI:3616416
NCBI chr 7:77,898,329...77,931,034
Ensembl chr 7:77,899,322...77,931,029
G
Glmn
glomulin, FKBP associated protein
ISO
MGI:3817643 (MGI:5320488|PMID:22405651)
RGD
PMID:22405651
MGI:5320488
NCBI chr14:3,204,390...3,247,703
Ensembl chr14:3,204,390...3,247,695
G
Grhl2
grainyhead-like transcription factor 2
ISO
MGI:4331210 (MGI:4835348|PMID:20654612), (MGI:4867118|PMID:20978075), (MGI:4947318|PMID:21262862)
RGD
PMID:20654612 PMID:20978075 PMID:21262862
MGI:4835348 MGI:4867118 MGI:4947318
NCBI chr 7:76,058,623...76,197,360
Ensembl chr 7:76,059,386...76,197,856
G
Grhl3
grainyhead-like transcription factor 3
ISO
(MGI:3689640|PMID:16949565), (MGI:4835348|PMID:20654612)
RGD
PMID:16949565 PMID:20654612
MGI:3689640 MGI:4835348
NCBI chr 5:153,893,039...153,925,045
Ensembl chr 5:153,893,039...153,924,896
G
Hectd1
HECT domain E3 ubiquitin protein ligase 1
ISO
MGI:2137552 (MGI:1267118|PMID:9636176), (MGI:3577662|PMID:15755804), (MGI:3714713|PMID:17442300)
RGD
PMID:9636176 PMID:15755804 PMID:17442300
MGI:1267118 MGI:3577662 MGI:3714713
NCBI chr 6:72,509,658...72,596,285
Ensembl chr 6:72,510,255...72,596,446
G
Ift122
intraflagellar transport 122
ISO
(MGI:3827087|PMID:19000668)
RGD
PMID:19000668
MGI:3827087
NCBI chr 4:147,756,574...147,826,983
Ensembl chr 4:147,756,553...147,826,997
G
Ift172
intraflagellar transport 172
ISO
MGI:3829198 (MGI:3828200|PMID:18930042)
RGD
PMID:18930042
MGI:3828200
NCBI chr 6:26,390,686...26,485,459
G
Ift57
intraflagellar transport 57
ISO
MGI:3707373 (MGI:3703110|PMID:17027958)
RGD
PMID:17027958
MGI:3703110
NCBI chr11:53,664,638...53,731,779
Ensembl chr11:53,664,638...53,731,779
G
Kat2a
lysine acetyltransferase 2A
ISO
MGI:3711317 (MGI:3709911|PMID:17325035)
RGD
PMID:17325035
MGI:3709911
NCBI chr10:88,611,586...88,619,558
Ensembl chr10:88,611,586...88,619,537
G
Kdm2a
lysine demethylase 2A
ISO
(MGI:5615026|PMID:25463925)
RGD
PMID:25463925
MGI:5615026
NCBI chr 1:219,566,130...219,642,294
Ensembl chr 1:219,566,156...219,640,294
G
Kdm6a
lysine demethylase 6A
ISO
MGI:5448825 (MGI:5448135|PMID:22949634)
RGD
PMID:22949634
MGI:5448135
NCBI chr X:4,805,493...4,945,788
Ensembl chr X:4,806,277...4,945,944
G
Kif20b
kinesin family member 20B
ISO
MGI:3578531 (MGI:3577662|PMID:15755804)
RGD
PMID:15755804
MGI:3577662
NCBI chr 1:253,220,038...253,275,523
Ensembl chr 1:253,221,812...253,275,490
G
Lhx2
LIM homeobox 2
involved_in
ISO IEA
MGI:1890208 (MGI:2154554|PMID:11719201) GO_REF:0000107
RGD Ensembl
PMID:11719201
GO_REF:0000107 MGI:2154554
NCBI chr 3:22,628,674...22,658,447
Ensembl chr 3:22,640,545...22,658,446
G
Lias
lipoic acid synthetase
ISO
MGI:3578174 (MGI:3577662|PMID:15755804)
RGD
PMID:15755804
MGI:3577662
NCBI chr14:44,507,217...44,524,287
Ensembl chr14:44,507,218...44,524,252
G
Lmo4
LIM domain only 4
ISO
MGI:3035827|MGI:3574586 (MGI:3029621|PMID:14966285), (MGI:3573996|PMID:15691703), (MGI:3689640|PMID:16949565)
RGD
PMID:14966285 PMID:15691703 PMID:16949565
MGI:3029621 MGI:3573996 MGI:3689640
NCBI chr 2:250,218,635...250,235,435
Ensembl chr 2:250,218,641...250,241,673
G
LOC100909544
bromodomain-containing protein 2-like
ISO
MGI:3840071 (MGI:6120662|PMID:19362612)
RGD
PMID:19362612
MGI:6120662
NCBI chr20:3,910,555...3,918,348
Ensembl chr20:3,910,555...3,917,426
G
LOC108348112
bromodomain-containing protein 2
involved_in
IEA
GO_REF:0000107
Ensembl
GO_REF:0000107
NCBI chr20:5,262,742...5,269,337
Ensembl chr20:5,262,120...5,269,337
G
Lrp2
LDL receptor related protein 2
involved_in
IEA ISS ISO
GO_REF:0000107 GO_REF:0000024 (MGI:5603707|PMID:24639464)
Ensembl UniProt RGD
PMID:24639464
GO_REF:0000024 GO_REF:0000107 MGI:5603707
NCBI chr 3:55,665,153...55,822,484
Ensembl chr 3:55,665,145...55,822,551
G
Lrp6
LDL receptor related protein 6
involved_in
ISO IBA
MGI:1861309|MGI:2673982|MGI:4415718|MGI:98958 (MGI:1347661|PMID:10545599), (MGI:3055483|PMID:15469977), (MGI:4413372|PMID:19795512), (MGI:4413396|PMID:19653321) PMID:21873635
RGD
PMID:10545599 PMID:15469977 PMID:19653321 PMID:19795512 , PMID:21873635 , PMID:21873635
MGI:1347661 MGI:3055483 MGI:4413372 MGI:4413396 MGI:61254 , RGD:13792537 , RGD:13792537
NCBI chr 4:168,194,054...168,323,962
Ensembl chr 4:168,194,927...168,323,751
G
Med12
mediator complex subunit 12
ISO
MGI:4839484 (MGI:4839483|PMID:20630950)
RGD
PMID:20630950
MGI:4839483
NCBI chr X:71,174,653...71,197,812
Ensembl chr X:71,174,699...71,197,812
G
Mks1
MKS transition zone complex subunit 1
involved_in
IEA ISO
GO_REF:0000107 MGI:4410614|MGI:4433029 (MGI:4367169|PMID:19776033), (MGI:5487695|PMID:23454480)
Ensembl RGD
PMID:19776033 PMID:23454480
GO_REF:0000107 MGI:4367169 MGI:5487695
NCBI chr10:75,149,814...75,160,481
Ensembl chr10:75,149,814...75,160,480
G
Mthfd1
methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1
ISO
(MGI:5503248|PMID:23704330)
RGD
PMID:23704330
MGI:5503248
NCBI chr 6:99,282,850...99,350,367
Ensembl chr 6:99,282,850...99,350,340
G
Mthfd1l
methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like
ISO
(MGI:5468075|PMID:23267094)
RGD
PMID:23267094
MGI:5468075
NCBI chr 1:40,529,092...40,719,232
Ensembl chr 1:40,529,045...40,719,391
G
Mthfr
methylenetetrahydrofolate reductase
acts_upstream_of
ISO
(PMID:25855017), (PMID:29222906)
RGD
PMID:25855017 PMID:29222906
NCBI chr 5:164,844,642...164,864,360
Ensembl chr 5:164,845,925...164,860,910
G
Nckap1
NCK-associated protein 1
ISO
MGI:3578145 (MGI:3701029|PMID:16831833)
RGD
PMID:16831833
MGI:3701029
NCBI chr 3:67,725,180...67,804,680
Ensembl chr 3:67,725,947...67,787,990
G
Nog
noggin
involved_in
IEA ISO
GO_REF:0000107 MGI:1856173|MGI:1862000 (MGI:3640733|PMID:16712836)
Ensembl RGD
PMID:16712836
GO_REF:0000107 MGI:3640733
NCBI chr10:76,811,759...76,813,386
Ensembl chr10:76,811,759...76,813,386
G
Opa1
OPA1, mitochondrial dynamin like GTPase
ISO
MGI:3578528 (MGI:3577662|PMID:15755804)
RGD
PMID:15755804
MGI:3577662
NCBI chr11:74,717,600...74,793,902
Ensembl chr11:74,720,254...74,793,803
G
Pax2
paired box 2
involved_in
ISS ISO
GO_REF:0000024 (MGI:84247|PMID:8951055)
UniProt RGD
PMID:8951055
GO_REF:0000024 MGI:84247
NCBI chr 1:264,493,579...264,585,073
Ensembl chr 1:264,504,591...264,583,329
G
Pax3
paired box 3
ISO
MGI:3043030 (MGI:3056222|PMID:15384171)
RGD
PMID:15384171
MGI:3056222
NCBI chr 9:84,004,004...84,101,226
Ensembl chr 9:84,005,183...84,101,172
G
Pfn1
profilin 1
ISO
MGI:108360 (MGI:1331576|PMID:10069337)
RGD
PMID:10069337
MGI:1331576
NCBI chr10:57,273,003...57,275,708
Ensembl chr10:57,273,005...57,275,708
G
Phactr4
phosphatase and actin regulator 4
ISO
(MGI:3719969|PMID:17609112)
RGD
PMID:17609112
MGI:3719969
NCBI chr 5:150,533,895...150,609,423
Ensembl chr 5:150,546,430...150,609,352
G
Plxnb2
plexin B2
ISO
(MGI:3712712|PMID:17554007)
RGD
PMID:17554007
MGI:3712712
NCBI chr 7:130,135,484...130,161,568
Ensembl chr 7:130,135,464...130,151,880
G
Prickle1
prickle planar cell polarity protein 1
involved_in
IEA ISO
GO_REF:0000107 (PMID:21901791)
Ensembl RGD
PMID:21901791
GO_REF:0000107
NCBI chr 7:134,702,964...134,799,437
Ensembl chr 7:134,702,964...134,722,215
G
Prkaca
protein kinase cAMP-activated catalytic subunit alpha
IEA ISO
GO_REF:0000107 MGI:97760 (MGI:5308523|PMID:22007132)
Ensembl RGD
PMID:22007132
GO_REF:0000107 MGI:5308523
NCBI chr19:25,095,089...25,118,869
Ensembl chr19:25,095,089...25,118,860
G
Prkacb
protein kinase cAMP-activated catalytic subunit beta
ISO
MGI:97592 (MGI:5308523|PMID:22007132)
RGD
PMID:22007132
MGI:5308523
NCBI chr 2:252,602,197...252,691,886
Ensembl chr 2:252,605,307...252,691,886
G
Ptch1
patched 1
ISO
MGI:1857447 (MGI:1095757|PMID:9262482)
RGD
PMID:9262482
MGI:1095757
NCBI chr17:1,032,242...1,085,885
Ensembl chr17:1,029,048...1,093,873
G
Ptk7
protein tyrosine kinase 7
ISO
MGI:2135272|MGI:3046905|MGI:3640803 (MGI:3046397|PMID:15229603), (MGI:4830023|PMID:20704721)
RGD
PMID:15229603 PMID:20704721
MGI:3046397 MGI:4830023
NCBI chr 9:16,662,588...16,729,888
Ensembl chr 9:16,702,460...16,729,030
G
Rab23
RAB23, member RAS oncogene family
ISO
MGI:2137533 (MGI:1267118|PMID:9636176), (MGI:69552|PMID:7720556)
RGD
PMID:7720556 PMID:9636176
MGI:1267118 MGI:69552
NCBI chr 9:38,469,784...38,496,185
Ensembl chr 9:38,470,298...38,495,176
G
Rala
RAS like proto-oncogene A
ISO
(MGI:5504565|PMID:23063435)
RGD
PMID:23063435
MGI:5504565
NCBI chr17:49,676,073...49,729,133
Ensembl chr17:49,714,294...49,727,664
G
Rara
retinoic acid receptor, alpha
ISO
MGI:97858 (MGI:69060|PMID:7607067)
RGD
PMID:7607067
MGI:69060
NCBI chr10:86,838,819...86,884,224
Ensembl chr10:86,860,685...86,884,210
G
Rarg
retinoic acid receptor, gamma
ISO
MGI:97856 (MGI:69060|PMID:7607067)
RGD
PMID:7607067
MGI:69060
NCBI chr 7:143,840,739...143,863,206
Ensembl chr 7:143,839,980...143,863,186
G
Rgma
repulsive guidance molecule BMP co-receptor a
ISO
MGI:3029714 (MGI:3027667|PMID:14749425)
RGD
PMID:14749425
MGI:3027667
NCBI chr 1:134,699,053...134,742,512
Ensembl chr 1:134,699,299...134,742,514
G
Rock2
Rho-associated coiled-coil containing protein kinase 2
ISO
MGI:1100883|MGI:2135272 (MGI:3703464|PMID:17229766)
RGD
PMID:17229766
MGI:3703464
NCBI chr 6:42,180,864...42,289,910
Ensembl chr 6:42,180,894...42,289,908
G
Rps7
ribosomal protein S7
ISO
MGI:3043039 (MGI:3056222|PMID:15384171)
RGD
PMID:15384171
MGI:3056222
NCBI chr 6:47,899,525...47,904,389
Ensembl chr 6:47,899,525...47,904,437
G
Sall1
spalt-like transcription factor 1
ISO
MGI:2139360 (MGI:3698636|PMID:16790473)
RGD
PMID:16790473
MGI:3698636
NCBI chr19:23,387,737...23,405,025
Ensembl chr19:23,389,375...23,405,039
G
Sall4
spalt-like transcription factor 4
ISO
MGI:1889585|MGI:3699175 (MGI:3698636|PMID:16790473)
RGD
PMID:16790473
MGI:3698636
NCBI chr 3:165,520,155...165,538,176
Ensembl chr 3:165,520,392...165,537,940
G
Scrib
scribble planar cell polarity protein
involved_in
ISO
(PMID:22095531) MGI:1889322|MGI:2135272|MGI:5056373 (MGI:4819429|PMID:20643356), (MGI:5050793|PMID:21515572)
RGD
PMID:20643356 PMID:21515572 PMID:22095531
MGI:4819429 MGI:5050793
NCBI chr 7:117,105,810...117,128,802
Ensembl chr 7:117,105,810...117,128,798
G
Sdc4
syndecan 4
ISO
MGI:2135272 (MGI:5498591|PMID:23760952)
RGD
PMID:23760952
MGI:5498591
NCBI chr 3:160,872,503...160,891,190
Ensembl chr 3:160,872,503...160,891,190
G
Sec24b
SEC24 homolog B, COPII coat complex component
ISO
MGI:2135272|MGI:4440621 (MGI:4438817|PMID:19966784), (MGI:4439427|PMID:20215345)
RGD
PMID:19966784 PMID:20215345
MGI:4438817 MGI:4439427
NCBI chr 2:230,286,886...230,356,887
Ensembl chr 2:230,287,296...230,356,919
G
Sema4c
semaphorin 4C
ISO
(MGI:4881530|PMID:21122816)
RGD
PMID:21122816
MGI:4881530
NCBI chr 9:43,129,413...43,140,442
Ensembl chr 9:43,129,415...43,139,870
G
Setd2
SET domain containing 2, histone lysine methyltransferase
ISO
MGI:4437211 (MGI:4431136|PMID:20133625)
RGD
PMID:20133625
MGI:4431136
NCBI chr 8:118,802,478...118,888,224
Ensembl chr 8:118,803,075...118,888,224
G
Sfrp1
secreted frizzled-related protein 1
ISO
MGI:108078 (MGI:4429763|PMID:19850029)
RGD
PMID:19850029
MGI:4429763
NCBI chr16:73,372,007...73,410,777
Ensembl chr16:73,372,007...73,410,777
G
Sfrp2
secreted frizzled-related protein 2
ISO
MGI:892014 (MGI:4429763|PMID:19850029)
RGD
PMID:19850029
MGI:4429763
NCBI chr 2:182,723,732...182,731,277
Ensembl chr 2:182,723,854...182,731,764
G
Shroom3
shroom family member 3
ISO
MGI:1889778 (MGI:3610718|PMID:16249236)
RGD
PMID:16249236
MGI:3610718
NCBI chr14:16,622,767...16,903,265
Ensembl chr14:16,622,760...16,903,242
G
Ski
SKI proto-oncogene
ISO
MGI:2177555 (MGI:1095997|PMID:9284043)
RGD
PMID:9284043
MGI:1095997
NCBI chr 5:172,556,196...172,623,878
Ensembl chr 5:172,559,135...172,623,899
G
Spint1
serine peptidase inhibitor, Kunitz type 1
ISO
MGI:1338031|MGI:1338881 (MGI:4360135|PMID:19592578)
RGD
PMID:19592578
MGI:4360135
NCBI chr 3:111,049,132...111,061,991
Ensembl chr 3:111,049,118...111,062,011
G
Spint2
serine peptidase inhibitor, Kunitz type, 2
ISO
MGI:1338033|MGI:1338881|MGI:2156187 (MGI:4360135|PMID:19592578)
RGD
PMID:19592578
MGI:4360135
NCBI chr 1:87,199,373...87,221,826
Ensembl chr 1:87,199,313...87,221,892
G
St14
ST14 transmembrane serine protease matriptase
ISO
MGI:1338031|MGI:1338033 (MGI:4360135|PMID:19592578)
RGD
PMID:19592578
MGI:4360135
NCBI chr 8:32,240,113...32,280,813
Ensembl chr 8:32,240,133...32,280,869
G
Stil
STIL, centriolar assembly protein
ISO
MGI:2152962 (MGI:1339521|PMID:10385121)
RGD
PMID:10385121
MGI:1339521
NCBI chr 5:133,819,302...133,851,362
Ensembl chr 5:133,819,726...133,851,416
G
Sufu
SUFU negative regulator of hedgehog signaling
ISO
MGI:3512046 (MGI:3604917|PMID:16155214)
RGD
PMID:16155214
MGI:3604917
NCBI chr 1:266,143,766...266,241,742
Ensembl chr 1:266,143,818...266,239,016
G
Tbxt
T-box transcription factor T
ISO
MGI:1856158 (MGI:3701028|PMID:16835439)
RGD
PMID:16835439
MGI:3701028
NCBI chr 1:52,887,067...52,900,691
Ensembl chr 1:52,887,067...52,894,832
G
Tead2
TEA domain transcription factor 2
ISO
MGI:3763367 (MGI:3763398|PMID:17868131)
RGD
PMID:17868131
MGI:3763398
NCBI chr 1:101,213,782...101,230,483
Ensembl chr 1:101,213,788...101,230,477
G
Tfap2a
transcription factor AP-2 alpha
ISO
MGI:2176682 (MGI:1313057|PMID:9811866), (MGI:80519|PMID:8622766)
RGD
PMID:8622766 PMID:9811866
MGI:1313057 MGI:80519
NCBI chr17:24,653,342...24,670,457
Ensembl chr17:24,654,902...24,670,457
G
Tgfb1
transforming growth factor, beta 1
ISO
(MGI:74339|PMID:7600998)
RGD
PMID:7600998
MGI:74339
NCBI chr 1:82,480,875...82,497,196
Ensembl chr 1:82,480,195...82,497,199
G
Tgfb2
transforming growth factor, beta 2
ISO
(MGI:894212|PMID:9217007)
RGD
PMID:9217007
MGI:894212
NCBI chr13:105,039,639...105,142,010
Ensembl chr13:105,039,853...105,141,030
G
Tgif1
TGFB-induced factor homeobox 1
ISO
MGI:3698004 (MGI:3697552|PMID:17082251)
RGD
PMID:17082251
MGI:3697552
NCBI chr 9:119,181,079...119,190,698
Ensembl chr 9:119,181,083...119,190,698
G
Tmed2
transmembrane p24 trafficking protein 2
ISO
MGI:4456438 (MGI:4453264|PMID:20178780)
RGD
PMID:20178780
MGI:4453264
NCBI chr12:37,471,259...37,480,344
Ensembl chr12:37,471,260...37,480,297
G
Traf6
TNF receptor associated factor 6
ISO
(MGI:2181331|PMID:11007897)
RGD
PMID:11007897
MGI:2181331
NCBI chr 3:91,252,829...91,271,607
Ensembl chr 3:91,252,829...91,271,607
G
Trim71
tripartite motif containing 71
ISO
MGI:4123844 (MGI:4356244|PMID:19098426)
RGD
PMID:19098426
MGI:4356244
NCBI chr 8:122,553,015...122,604,787
Ensembl chr 8:122,553,015...122,604,787
G
Tsc1
TSC complex subunit 1
ISO
MGI:2183146 (MGI:2137425|PMID:11438694)
RGD
PMID:11438694
MGI:2137425
NCBI chr 3:7,219,955...7,269,063
Ensembl chr 3:7,237,192...7,265,145
G
Tsc2
TSC complex subunit 2
ISO
MGI:1926345 (MGI:1333508|PMID:10096549)
RGD
PMID:10096549
MGI:1333508
NCBI chr10:13,962,006...13,996,684
Ensembl chr10:13,961,947...13,996,584
G
Tulp3
TUB like protein 3
ISO
MGI:3664273 (MGI:3841513|PMID:19223390)
RGD
PMID:19223390
MGI:3841513
NCBI chr 4:161,636,084...161,677,807
Ensembl chr 4:161,637,892...161,658,519
G
Twist1
twist family bHLH transcription factor 1
ISO
MGI:1857265 (MGI:72096|PMID:7729687)
RGD
PMID:7729687
MGI:72096
NCBI chr 6:53,401,241...53,403,235
Ensembl chr 6:53,401,109...53,403,214
G
Vangl2
VANGL planar cell polarity protein 2
ISO
MGI:105056|MGI:107926|MGI:1100883|MGI:1349164|MGI:1857642|MGI:1918711|MGI:1923799|MGI:2139764|MGI:98958 (MGI:2153976|PMID:11709546), (MGI:2449213|PMID:12499390), (MGI:2676511|PMID:14512015), (MGI:3046397|PMID:15229603), (MGI:3703464|PMID:17229766), (MGI:3714704|PMID:17433286), (MGI:4438817|PMID:19966784), (MGI:4880797|PMID:21246654), (MGI:5498591|PMID:23760952)
RGD
PMID:11709546 PMID:12499390 PMID:14512015 PMID:15229603 PMID:17229766 PMID:17433286 PMID:19966784 PMID:21246654 PMID:23760952
MGI:2153976 MGI:2449213 MGI:2676511 MGI:3046397 MGI:3703464 MGI:3714704 MGI:4438817 MGI:4880797 MGI:5498591
NCBI chr13:90,379,203...90,405,627
Ensembl chr13:90,380,632...90,405,591
G
Vasp
vasodilator-stimulated phosphoprotein
involved_in
ISO IBA
MGI:108360 (MGI:3054149|PMID:15371503) PMID:21873635
RGD
PMID:15371503 , PMID:21873635 , PMID:21873635
MGI:3054149 , RGD:13792537 , RGD:13792537
NCBI chr 1:80,170,608...80,185,882
Ensembl chr 1:80,170,619...80,185,882
G
Wnt5a
Wnt family member 5A
ISO
MGI:1298218|MGI:2135272 (MGI:3714704|PMID:17433286), (MGI:4413372|PMID:19795512)
RGD
PMID:17433286 PMID:19795512
MGI:3714704 MGI:4413372
NCBI chr16:4,469,451...4,490,271
Ensembl chr16:4,469,468...4,489,860
G
Zeb2
zinc finger E-box binding homeobox 2
ISO
MGI:2387501 (MGI:3624924|PMID:16598713)
RGD
PMID:16598713
MGI:3624924
NCBI chr 3:29,857,289...29,985,932
Ensembl chr 3:29,862,473...29,996,865
G
Zic2
Zic family member 2
ISO
MGI:1862004 (MGI:3056222|PMID:15384171)
RGD
PMID:15384171
MGI:3056222
NCBI chr15:108,908,366...108,913,812
Ensembl chr15:108,908,607...108,912,737
G
Zic5
Zic family member 5
ISO
MGI:3052154 (MGI:3051968|PMID:15136147)
RGD
PMID:15136147
MGI:3051968
NCBI chr15:108,891,992...108,907,601
Ensembl chr15:108,891,992...108,898,703
G
Brpf1
bromodomain and PHD finger containing, 1
ISO
MGI:5705132 (MGI:5806011|PMID:27528195)
RGD
PMID:27528195
MGI:5806011
NCBI chr 4:145,264,445...145,280,943
Ensembl chr 4:145,264,462...145,280,857
G
Casp8
caspase 8
ISO
MGI:3609638 (MGI:3609631|PMID:12404118)
RGD
PMID:12404118
MGI:3609631
NCBI chr 9:65,614,142...65,662,624
Ensembl chr 9:65,614,142...65,662,106
G
Cited2
Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2
ISO
MGI:2179740 (MGI:2179743|PMID:11694877)
RGD
PMID:11694877
MGI:2179743
NCBI chr 1:12,823,363...12,825,806
Ensembl chr 1:12,823,363...12,825,786
G
Coq7
coenzyme Q7, hydroxylase
ISO
MGI:2158322 (MGI:2154585|PMID:11716496)
RGD
PMID:11716496
MGI:2154585
NCBI chr 1:188,176,060...188,190,874
Ensembl chr 1:188,174,874...188,190,860
G
Ift172
intraflagellar transport 172
ISO
MGI:2682066 (MGI:2679893|PMID:14603322)
RGD
PMID:14603322
MGI:2679893
NCBI chr 6:26,390,686...26,485,459
G
Ift52
intraflagellar transport 52
ISO
(MGI:3579954|PMID:15930098)
RGD
PMID:15930098
MGI:3579954
NCBI chr 3:159,388,868...159,413,358
Ensembl chr 3:159,392,193...159,413,575
G
Ipmk
inositol polyphosphate multikinase
ISO
MGI:3583918 (MGI:3583505|PMID:15939867)
RGD
PMID:15939867
MGI:3583505
NCBI chr20:18,457,309...18,489,884
Ensembl chr20:18,457,310...18,489,833
G
Map3k7
mitogen activated protein kinase kinase kinase 7
ISO
(MGI:3607973|PMID:16260493)
RGD
PMID:16260493
MGI:3607973
NCBI chr 5:47,183,142...47,244,424
Ensembl chr 5:47,186,558...47,244,416
G
Mib1
MIB E3 ubiquitin protein ligase 1
ISO
MGI:3603514 (MGI:3603078|PMID:16000382)
RGD
PMID:16000382
MGI:3603078
NCBI chr18:1,970,914...2,094,920
Ensembl chr18:1,970,914...2,094,920
G
Nup50
nucleoporin 50
involved_in
IEA ISO
GO_REF:0000107 MGI:103561|MGI:107532|MGI:2152414|MGI:2385621|MGI:2386173 (MGI:1860670|PMID:10891500)
Ensembl RGD
PMID:10891500
GO_REF:0000107 MGI:1860670
NCBI chr 7:125,833,557...125,850,830
Ensembl chr 7:125,833,557...125,850,827
G
Ptch1
patched 1
ISO
(MGI:3687672|PMID:10500113)
RGD
PMID:10500113
MGI:3687672
NCBI chr17:1,032,242...1,085,885
Ensembl chr17:1,029,048...1,093,873
G
Shh
sonic hedgehog signaling molecule
IMP
RGD
PMID:8124714
RGD:69996
NCBI chr 4:718,538...727,691
Ensembl chr 4:718,538...727,691
G
Sox11
SRY-box transcription factor 11
involved_in
ISS ISO
GO_REF:0000024 (MGI:5285157|PMID:20596238)
UniProt RGD
PMID:20596238
GO_REF:0000024 MGI:5285157
NCBI chr 6:46,629,967...46,631,988
Ensembl chr 6:46,629,974...46,631,983
G
Sox4
SRY-box transcription factor 4
ISO
(MGI:5285157|PMID:20596238)
RGD
PMID:20596238
MGI:5285157
NCBI chr17:37,615,022...37,619,728
G
Stk3
serine/threonine kinase 3
involved_in
IEA ISO
GO_REF:0000107 MGI:1929004 (MGI:4412133|PMID:19786569)
Ensembl RGD
PMID:19786569
GO_REF:0000107 MGI:4412133
NCBI chr 7:73,617,926...73,883,896
Ensembl chr 7:73,618,644...73,883,812
G
Stk4
serine/threonine kinase 4
ISO
MGI:1928487 (MGI:4412133|PMID:19786569)
RGD
PMID:19786569
MGI:4412133
NCBI chr 3:160,467,552...160,546,540
Ensembl chr 3:160,467,552...160,546,540
G
Tctn1
tectonic family member 1
ISO
MGI:3716885 (MGI:3610767|PMID:16357211)
RGD
PMID:16357211
MGI:3610767
NCBI chr12:39,790,948...39,828,215
Ensembl chr12:39,790,965...39,824,064
G
Tulp3
TUB like protein 3
ISO
MGI:2388066 (MGI:2136130|PMID:11406614)
RGD
PMID:11406614
MGI:2136130
NCBI chr 4:161,636,084...161,677,807
Ensembl chr 4:161,637,892...161,658,519
G
Arl13b
ADP-ribosylation factor like GTPase 13B
ISO
(MGI:5444047|PMID:23014696)
RGD
PMID:23014696
MGI:5444047
NCBI chr 7:1,122,567...1,188,209
Ensembl chr 7:1,122,567...1,188,209
G
Dzip1l
DAZ interacting zinc finger protein 1-like
ISO
MGI:2442827 (MGI:6149643|PMID:29487109)
RGD
PMID:29487109
MGI:6149643
NCBI chr 8:107,875,659...107,916,298
Ensembl chr 8:107,875,991...107,916,294
G
Ift140
intraflagellar transport 140
ISO
MGI:4458412 (MGI:5635784|PMID:24009529)
RGD
PMID:24009529
MGI:5635784
NCBI chr10:14,373,668...14,461,509
Ensembl chr10:14,373,679...14,461,160
G
Ptch1
patched 1
involved_in
ISO
(PMID:8681379)
RGD
PMID:8681379
NCBI chr17:1,032,242...1,085,885
Ensembl chr17:1,029,048...1,093,873
G
Rpgrip1l
Rpgrip1-like
ISO
MGI:3716208 (MGI:3715393|PMID:17553904)
RGD
PMID:17553904
MGI:3715393
NCBI chr19:17,115,266...17,208,055
Ensembl chr19:17,115,412...17,208,055
G
Tbc1d32
TBC1 domain family, member 32
ISO
MGI:1919757 (MGI:6149643|PMID:29487109)
RGD
PMID:29487109
MGI:6149643
NCBI chr20:37,463,879...37,701,268
Ensembl chr20:37,465,278...37,700,937
G
Tmem107
transmembrane protein 107
ISO
(MGI:5432629|PMID:22698544)
RGD
PMID:22698544
MGI:5432629
NCBI chr10:55,653,694...55,656,270
Ensembl chr10:55,653,946...55,656,270
G
Traf3ip1
TRAF3 interacting protein 1
ISO
MGI:4129326 (MGI:5298450|PMID:21945076)
RGD
PMID:21945076
MGI:5298450
NCBI chr 9:98,621,499...98,658,223
Ensembl chr 9:98,621,506...98,656,901
G
Celsr1
cadherin, EGF LAG seven-pass G-type receptor 1
ISO
MGI:1918711|MGI:2135272 (MGI:4830023|PMID:20704721)
RGD
PMID:20704721
MGI:4830023
NCBI chr 7:126,774,010...126,914,085
Ensembl chr 7:126,775,516...126,913,585
G
Dvl1
dishevelled segment polarity protein 1
involved_in
ISO IBA
MGI:106613 (MGI:3624185|PMID:16571627) PMID:21873635
RGD
PMID:16571627 , PMID:21873635 , PMID:21873635
MGI:3624185 , RGD:13792537 , RGD:13792537
NCBI chr 5:173,295,948...173,308,014
Ensembl chr 5:173,296,270...173,307,945
G
Dvl2
dishevelled segment polarity protein 2
involved_in
ISO IBA
MGI:2135272|MGI:2429760|MGI:94941 (MGI:3624185|PMID:16571627) PMID:21873635
RGD
PMID:16571627 , PMID:21873635 , PMID:21873635
MGI:3624185 , RGD:13792537 , RGD:13792537
NCBI chr10:56,609,810...56,619,269
Ensembl chr10:56,610,051...56,619,269
G
Dvl3
dishevelled segment polarity protein 3
ISO IBA
MGI:2135272 (MGI:3821448|PMID:19008950) PMID:21873635
RGD
PMID:19008950 , PMID:21873635
MGI:3821448 , RGD:13792537
NCBI chr11:84,051,177...84,068,479
Ensembl chr11:84,051,078...84,068,302
G
Fzd1
frizzled class receptor 1
involved_in
IEA ISO
GO_REF:0000107 MGI:1888513|MGI:2135272 (MGI:4837757|PMID:20940229)
Ensembl RGD
PMID:20940229
GO_REF:0000107 MGI:4837757
NCBI chr 4:26,470,864...26,475,262
Ensembl chr 4:26,470,864...26,475,262
G
Fzd2
frizzled class receptor 2
involved_in
IEA ISO
GO_REF:0000107 MGI:1196625|MGI:2135272 (MGI:4837757|PMID:20940229)
Ensembl RGD
PMID:20940229
GO_REF:0000107 MGI:4837757
NCBI chr10:90,550,147...90,552,057
Ensembl chr10:90,550,147...90,552,057
G
Grhl3
grainyhead-like transcription factor 3
ISO
MGI:2135272 (MGI:4819429|PMID:20643356)
RGD
PMID:20643356
MGI:4819429
NCBI chr 5:153,893,039...153,925,045
Ensembl chr 5:153,893,039...153,924,896
G
Ptk7
protein tyrosine kinase 7
ISO
MGI:1100883|MGI:2135272 (MGI:4830023|PMID:20704721)
RGD
PMID:20704721
MGI:4830023
NCBI chr 9:16,662,588...16,729,888
Ensembl chr 9:16,702,460...16,729,030
G
Sfrp1
secreted frizzled-related protein 1
involved_in
IEA ISO
GO_REF:0000107 MGI:108078|MGI:1860298|MGI:2135272 (MGI:3793375|PMID:18257070)
Ensembl RGD
PMID:18257070
GO_REF:0000107 MGI:3793375
NCBI chr16:73,372,007...73,410,777
Ensembl chr16:73,372,007...73,410,777
G
Sfrp2
secreted frizzled-related protein 2
ISO
MGI:1860298|MGI:2135272|MGI:892014 (MGI:3793375|PMID:18257070)
RGD
PMID:18257070
MGI:3793375
NCBI chr 2:182,723,732...182,731,277
Ensembl chr 2:182,723,854...182,731,764
G
Sfrp5
secreted frizzled-related protein 5
ISO
MGI:108078|MGI:2135272|MGI:892014 (MGI:3793375|PMID:18257070)
RGD
PMID:18257070
MGI:3793375
NCBI chr 1:261,442,108...261,446,570
Ensembl chr 1:261,442,108...261,446,570
G
Vangl2
VANGL planar cell polarity protein 2
ISO
MGI:106613|MGI:108078|MGI:108100|MGI:1100883|MGI:1196625|MGI:1857642|MGI:1860298|MGI:1888513|MGI:1918711|MGI:2655333|MGI:892014 (MGI:3624185|PMID:16571627), (MGI:3793375|PMID:18257070), (MGI:3821448|PMID:19008950), (MGI:4819429|PMID:20643356), (MGI:4830023|PMID:20704721), (MGI:4837757|PMID:20940229)
RGD
PMID:16571627 PMID:18257070 PMID:19008950 PMID:20643356 PMID:20704721 PMID:20940229
MGI:3624185 MGI:3793375 MGI:3821448 MGI:4819429 MGI:4830023 MGI:4837757
NCBI chr13:90,379,203...90,405,627
Ensembl chr13:90,380,632...90,405,591
G
Wnt5a
Wnt family member 5A
involved_in
IEA ISO
GO_REF:0000107 MGI:1857617 (MGI:4830282|PMID:19056682)
Ensembl RGD
PMID:19056682
GO_REF:0000107 MGI:4830282
NCBI chr16:4,469,451...4,490,271
Ensembl chr16:4,469,468...4,489,860
G
Gorab
golgin, RAB6-interacting
ISO
(MGI:5766823|PMID:26967474)
RGD
PMID:26967474
MGI:5766823
NCBI chr13:81,682,207...81,698,827
Ensembl chr13:81,682,018...81,698,833
G
Sec24b
SEC24 homolog B, COPII coat complex component
ISO
MGI:4440619|MGI:4440621 (MGI:4438817|PMID:19966784)
RGD
PMID:19966784
MGI:4438817
NCBI chr 2:230,286,886...230,356,887
Ensembl chr 2:230,287,296...230,356,919
G
Cdk20
cyclin-dependent kinase 20
ISO
MGI:95728|MGI:95729 (MGI:5912686|PMID:28817564)
RGD
PMID:28817564
MGI:5912686
NCBI chr17:1,935,900...1,942,867
Ensembl chr17:1,936,163...1,942,865
G
Gli2
GLI family zinc finger 2
ISO
MGI:2145349 (MGI:5912686|PMID:28817564)
RGD
PMID:28817564
MGI:5912686
NCBI chr13:34,829,021...35,049,172
Ensembl chr13:34,829,139...35,048,444
G
Gli3
GLI family zinc finger 3
ISO
MGI:2145349 (MGI:5912686|PMID:28817564)
RGD
PMID:28817564
MGI:5912686
NCBI chr17:52,294,942...52,569,036
Ensembl chr17:52,294,942...52,569,036
G
Mks1
MKS transition zone complex subunit 1
involved_in
IEA ISO
GO_REF:0000107 MGI:4887578 (MGI:4868517|PMID:21045211)
Ensembl RGD
PMID:21045211
GO_REF:0000107 MGI:4868517
NCBI chr10:75,149,814...75,160,481
Ensembl chr10:75,149,814...75,160,480
G
Gdf7
growth differentiation factor 7
ISO
MGI:2386906 (MGI:1353705|PMID:10693795)
RGD
PMID:10693795
MGI:1353705
NCBI chr 6:33,496,596...33,507,626
Ensembl chr 6:33,503,217...33,507,542
G
Atp6ap2
ATPase H+ transporting accessory protein 2
involved_in
ISO
(PMID:20093472)
RGD
PMID:20093472
NCBI chr X:11,137,889...11,164,854
Ensembl chr X:11,136,939...11,164,915
G
Bmi1
BMI1 proto-oncogene, polycomb ring finger
ISO
MGI:1857632 (MGI:82985|PMID:8887324)
RGD
PMID:8887324
MGI:82985
NCBI chr17:85,360,439...85,370,283
Ensembl chr17:85,364,483...85,368,208
G
Sox17
SRY-box transcription factor 17
ISO
MGI:2179440 (MGI:4421275|PMID:19913509)
RGD
PMID:19913509
MGI:4421275
NCBI chr 5:14,890,318...14,895,907
Ensembl chr 5:14,890,408...14,895,907
G
Gli2
GLI family zinc finger 2
ISO
MGI:2442827|MGI:95729 (MGI:3709667|PMID:17395647), (MGI:4439200|PMID:20159594)
RGD
PMID:17395647 PMID:20159594
MGI:3709667 MGI:4439200
NCBI chr13:34,829,021...35,049,172
Ensembl chr13:34,829,139...35,048,444
G
Gli3
GLI family zinc finger 3
ISO
MGI:2442827|MGI:95728 (MGI:3709667|PMID:17395647), (MGI:4439200|PMID:20159594)
RGD
PMID:17395647 PMID:20159594
MGI:3709667 MGI:4439200
NCBI chr17:52,294,942...52,569,036
Ensembl chr17:52,294,942...52,569,036
G
Ift122
intraflagellar transport 122
ISO
MGI:2443231 (MGI:5428054|PMID:22689656)
RGD
PMID:22689656
MGI:5428054
NCBI chr 4:147,756,574...147,826,983
Ensembl chr 4:147,756,553...147,826,997
G
Ptch1
patched 1
ISO
MGI:1857447 (MGI:4355593|PMID:19684112)
RGD
PMID:19684112
MGI:4355593
NCBI chr17:1,032,242...1,085,885
Ensembl chr17:1,029,048...1,093,873
G
Tbc1d32
TBC1 domain family, member 32
ISO
MGI:95728|MGI:95729 (MGI:4439200|PMID:20159594)
RGD
PMID:20159594
MGI:4439200
NCBI chr20:37,463,879...37,701,268
Ensembl chr20:37,465,278...37,700,937
G
Tulp3
TUB like protein 3
ISO
MGI:3664273 (MGI:3841513|PMID:19223390)
RGD
PMID:19223390
MGI:3841513
NCBI chr 4:161,636,084...161,677,807
Ensembl chr 4:161,637,892...161,658,519
G
Wdr19
WD repeat domain 19
ISO
MGI:1932386|MGI:5315748 (MGI:5428054|PMID:22689656)
RGD
PMID:22689656
MGI:5428054
NCBI chr14:44,705,012...44,767,120
Ensembl chr14:44,705,012...44,767,120
G
Shh
sonic hedgehog signaling molecule
IDA
RGD
PMID:25281935
RGD:12832757
NCBI chr 4:718,538...727,691
Ensembl chr 4:718,538...727,691
Term paths to the root one shortest all shortest one longest all longest one shortest and longest all