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ONTOLOGY REPORT - ANNOTATIONS

Term:olfactory bulb interneuron differentiation
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Accession:GO:0021889 term browser browse the term
Definition:The process in which a neuroblast acquires specialized features of an interneuron residing in the olfactory bulb.

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olfactory bulb interneuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atf5 activating transcription factor 5 acts_upstream_of_or_within ISO MGI:5467393 (MGI:5461281|PMID:23090999) RGD PMID:23090999 MGI:5461281 NCBI chr 1:95,295,602...95,299,755 JBrowse link
G Dicer1 dicer 1 ribonuclease III acts_upstream_of_or_within ISO (MGI:3778596|PMID:18184563) RGD PMID:18184563 MGI:3778596 NCBI chr 6:123,627,529...123,692,278 JBrowse link
G Dlx5 distal-less homeobox 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2180475 (MGI:5774924|PMID:25937343)		 Ensembl
RGD		 PMID:25937343 GO_REF:0000107 MGI:5774924 NCBI chr 4:34,999,139...35,003,504 JBrowse link
G Erbb4 erb-b2 receptor tyrosine kinase 4 involved_in ISS
ISO
IEA		 GO_REF:0000024
(MGI:3527369|PMID:15543145)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:15543145 GO_REF:0000024 GO_REF:0000107 MGI:3527369 NCBI chr 9:69,523,733...70,596,743 JBrowse link
G Gsx2 GS homeobox 2 acts_upstream_of_or_within ISO MGI:2150162 (MGI:1926244|PMID:11060228) RGD PMID:11060228 MGI:1926244 NCBI chr14:33,123,799...33,126,151 JBrowse link
G Mir200a microRNA 200a acts_upstream_of_or_within ISO (MGI:5774924|PMID:25937343) RGD PMID:25937343 MGI:5774924 NCBI chr 5:166,648,494...166,648,582 JBrowse link
G Mir200b microRNA 200b acts_upstream_of_or_within ISO (MGI:5774924|PMID:25937343) RGD PMID:25937343 MGI:5774924 NCBI chr 5:166,649,272...166,649,366 JBrowse link
G Mir200c microRNA 200c acts_upstream_of_or_within ISO (MGI:5774924|PMID:25937343) RGD PMID:25937343 MGI:5774924 NCBI chr 4:157,523,679...157,523,747 JBrowse link
G Mir9-3 microRNA 9-3 acts_upstream_of_or_within ISO (MGI:5774924|PMID:25937343) RGD PMID:25937343 MGI:5774924 NCBI chr 1:133,440,049...133,440,138 JBrowse link
G Sall1 spalt-like transcription factor 1 involved_in ISO (MGI:4420747|PMID:18024993) RGD PMID:18024993 MGI:4420747 NCBI chr19:18,005,782...18,022,705 JBrowse link
G Uncx UNC homeobox involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1928812 (MGI:4949589|PMID:20692344)		 Ensembl
RGD		 PMID:20692344 GO_REF:0000107 MGI:4949589 NCBI chr12:15,092,779...15,097,300 JBrowse link
chemorepulsion involved in embryonic olfactory bulb interneuron precursor migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slit1 slit guidance ligand 1 NOT|involved_in ISO (PMID:11748139) RGD PMID:11748139 NCBI chr 1:240,409,559...240,558,127 JBrowse link
G Slit2 slit guidance ligand 2 NOT|involved_in ISO (PMID:11748139) RGD PMID:11748139 NCBI chr14:62,616,337...62,955,934 JBrowse link
G Slit3 slit guidance ligand 3 NOT|involved_in ISO (PMID:11748139) RGD PMID:11748139 NCBI chr10:19,571,798...20,156,634 JBrowse link
chemorepulsion involved in postnatal olfactory bulb interneuron migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Robo1 roundabout guidance receptor 1 involved_in ISO
IEA		 (PMID:15207848)
GO_REF:0000107		 RGD
Ensembl		 PMID:15207848 GO_REF:0000107 NCBI chr11:10,580,863...11,621,672 JBrowse link
G Slit2 slit guidance ligand 2 involved_in ISO
IEA		 (PMID:15207848)
GO_REF:0000107		 RGD
Ensembl		 PMID:15207848 GO_REF:0000107 NCBI chr14:62,616,337...62,955,934 JBrowse link
embryonic olfactory bulb interneuron precursor migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arx aristaless related homeobox involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2429693 (MGI:3574008|PMID:15677725)		 Ensembl
RGD		 PMID:15677725 GO_REF:0000107 MGI:3574008 NCBI chr  X:58,016,233...58,028,149 JBrowse link
G Rac1 Rac family small GTPase 1 acts_upstream_of_or_within ISO MGI:1932522|MGI:2663662 (MGI:3709518|PMID:17409253) RGD PMID:17409253 MGI:3709518 NCBI chr12:11,037,028...11,057,251 JBrowse link
motogenic signaling involved in postnatal olfactory bulb interneuron migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgfr1 Fibroblast growth factor receptor 1 IMP RGD PMID:20083104 RGD:2325172 NCBI chr16:66,492,445...66,546,731 JBrowse link
olfactory bulb interneuron development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atf5 activating transcription factor 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:5467393 (MGI:5461281|PMID:23090999)		 Ensembl
RGD		 PMID:23090999 GO_REF:0000107 MGI:5461281 NCBI chr 1:95,295,602...95,299,755 JBrowse link
G Robo1 roundabout guidance receptor 1 involved_in ISO UniProtKB:Q7TPD3 (MGI:3702250|PMID:17360927) RGD PMID:17360927 MGI:3702250 NCBI chr11:10,580,863...11,621,672 JBrowse link
G Robo2 roundabout guidance receptor 2 involved_in ISO (MGI:3702250|PMID:17360927) RGD PMID:17360927 MGI:3702250 NCBI chr11:12,528,949...14,096,726 JBrowse link
G Sall3 spalt-like transcription factor 3 acts_upstream_of_or_within ISO MGI:3052730 (MGI:3798379|PMID:18260139) RGD PMID:18260139 MGI:3798379 NCBI chr18:74,406,058...74,425,754 JBrowse link
G Wnt5a Wnt family member 5A involved_in IEA
ISO		 GO_REF:0000107
(MGI:5285122|PMID:21539518)		 Ensembl
RGD		 PMID:21539518 GO_REF:0000107 MGI:5285122 NCBI chr16:3,695,667...3,718,234 JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19492
    developmental process 6768
      anatomical structure development 6195
        olfactory bulb development 49
          olfactory bulb interneuron differentiation 21
            olfactory bulb interneuron development + 11
            olfactory bulb interneuron fate commitment 0
Path 2
Term Annotations click to browse term
  biological_process 19492
    developmental process 6768
      anatomical structure development 6195
        multicellular organism development 5632
          system development 5300
            nervous system development 2731
              central nervous system development 1270
                brain development 976
                  forebrain development 510
                    telencephalon development 342
                      olfactory lobe development 52
                        olfactory bulb development 49
                          olfactory bulb interneuron differentiation 21
                            olfactory bulb interneuron development + 11
                            olfactory bulb interneuron fate commitment 0
paths to the root