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ONTOLOGY REPORT - ANNOTATIONS

Term:olfactory bulb interneuron differentiation
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Accession:GO:0021889 term browser browse the term
Definition:The process in which a neuroblast acquires specialized features of an interneuron residing in the olfactory bulb.


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olfactory bulb interneuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atf5 activating transcription factor 5 acts_upstream_of_or_within ISO
IEA 		MGI:5467393 (PMID:23090999)
GO_REF:0000107 		RGD
Ensembl		 PMID:23090999 GO_REF:0000107 NCBI chr 1:104,432,094...104,437,611
Ensembl chr 1:104,432,094...104,436,183 		JBrowse link
G Dicer1 dicer 1 ribonuclease III acts_upstream_of_or_within ISO (PMID:18184563) RGD PMID:18184563 NCBI chr 6:129,392,298...129,457,252
Ensembl chr 6:129,396,014...129,457,252 		JBrowse link
G Dlx5 distal-less homeobox 5 acts_upstream_of_or_within ISO
IEA 		MGI:2180475 (PMID:25937343)
GO_REF:0000107 		RGD
Ensembl		 PMID:25937343 GO_REF:0000107 NCBI chr 4:35,965,579...35,969,973
Ensembl chr 4:35,965,579...35,969,845 		JBrowse link
G Erbb4 erb-b2 receptor tyrosine kinase 4 involved_in ISS
ISO
IEA 		GO_REF:0000024
(PMID:15543145)
GO_REF:0000107 		UniProt
RGD
Ensembl		 PMID:15543145 GO_REF:0000024 GO_REF:0000107 NCBI chr 9:76,973,386...78,045,633
Ensembl chr 9:76,973,227...78,045,772 		JBrowse link
G Gsx2 GS homeobox 2 acts_upstream_of_or_within ISO
IEA 		MGI:2150162 (PMID:11060228)
GO_REF:0000107 		RGD
Ensembl		 PMID:11060228 GO_REF:0000107 NCBI chr14:33,477,968...33,480,320
Ensembl chr14:33,477,968...33,480,320 		JBrowse link
G Mir200a microRNA 200a acts_upstream_of_or_within ISO (PMID:25937343) RGD PMID:25937343 NCBI chr 5:171,930,717...171,930,805 JBrowse link
G Mir200b microRNA 200b acts_upstream_of_or_within ISO (PMID:25937343) RGD PMID:25937343 NCBI chr 5:171,931,495...171,931,589 JBrowse link
G Mir200c microRNA 200c acts_upstream_of_or_within ISO (PMID:25937343) RGD PMID:25937343 NCBI chr 4:159,209,965...159,210,033 JBrowse link
G Mir9-3 microRNA 9-3 acts_upstream_of_or_within ISO (PMID:25937343) RGD PMID:25937343 NCBI chr 1:142,849,400...142,849,489 JBrowse link
G Sall1 spalt-like transcription factor 1 involved_in ISO
IEA 		(PMID:18024993)
GO_REF:0000117 		RGD
UniProt		 PMID:18024993 GO_REF:0000117 NCBI chr19:34,179,316...34,196,278
Ensembl chr19:34,181,078...34,196,278 		JBrowse link
G Sall3 spalt-like transcription factor 3 involved_in IEA GO_REF:0000117 UniProt GO_REF:0000117 NCBI chr18:76,680,997...76,700,905
Ensembl chr18:76,681,005...76,700,905 		JBrowse link
G Uncx UNC homeobox acts_upstream_of_or_within ISO
IEA 		MGI:1928812 (PMID:20692344)
GO_REF:0000107 		RGD
Ensembl		 PMID:20692344 GO_REF:0000107 NCBI chr12:20,206,604...20,211,125
Ensembl chr12:20,206,609...20,211,125 		JBrowse link
chemorepulsion involved in embryonic olfactory bulb interneuron precursor migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slit1 slit guidance ligand 1 NOT|involved_in ISO (PMID:11748139) RGD PMID:11748139 NCBI chr 1:250,358,917...250,507,476
Ensembl chr 1:250,358,919...250,507,476 		JBrowse link
G Slit2 slit guidance ligand 2 NOT|involved_in ISO (PMID:11748139) RGD PMID:11748139 NCBI chr14:66,829,661...67,168,517
Ensembl chr14:66,829,661...67,167,146 		JBrowse link
G Slit3 slit guidance ligand 3 NOT|involved_in ISO (PMID:11748139) RGD PMID:11748139 NCBI chr10:20,075,929...20,660,704
Ensembl chr10:20,076,021...20,660,704 		JBrowse link
chemorepulsion involved in postnatal olfactory bulb interneuron migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Robo1 roundabout guidance receptor 1 involved_in ISO
IEA 		(PMID:15207848)
GO_REF:0000107 		RGD
Ensembl		 PMID:15207848 GO_REF:0000107 NCBI chr11:24,067,869...25,108,694
Ensembl chr11:24,067,878...25,108,694 		JBrowse link
G Slit2 slit guidance ligand 2 involved_in ISO
IEA 		(PMID:15207848)
GO_REF:0000107 		RGD
Ensembl		 PMID:15207848 GO_REF:0000107 NCBI chr14:66,829,661...67,168,517
Ensembl chr14:66,829,661...67,167,146 		JBrowse link
embryonic olfactory bulb interneuron precursor migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arx aristaless related homeobox acts_upstream_of_or_within ISO
IEA 		MGI:2429693 (PMID:15677725)
GO_REF:0000107 		RGD
Ensembl		 PMID:15677725 GO_REF:0000107 NCBI chr  X:62,010,097...62,022,009
Ensembl chr  X:62,010,097...62,022,002 		JBrowse link
G Rac1 Rac family small GTPase 1 acts_upstream_of_or_within ISO MGI:1932522|MGI:2663662 (PMID:17409253) RGD PMID:17409253 NCBI chr12:16,150,411...16,170,864
Ensembl chr12:16,128,649...16,172,109 		JBrowse link
olfactory bulb interneuron development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atf5 activating transcription factor 5 acts_upstream_of_or_within ISO
IEA 		MGI:5467393 (PMID:23090999)
GO_REF:0000107 		RGD
Ensembl		 PMID:23090999 GO_REF:0000107 NCBI chr 1:104,432,094...104,437,611
Ensembl chr 1:104,432,094...104,436,183 		JBrowse link
G Robo1 roundabout guidance receptor 1 involved_in ISO UniProtKB:Q7TPD3 (PMID:17360927) RGD PMID:17360927 NCBI chr11:24,067,869...25,108,694
Ensembl chr11:24,067,878...25,108,694 		JBrowse link
G Robo2 roundabout guidance receptor 2 involved_in ISO (PMID:17360927) RGD PMID:17360927 NCBI chr11:26,015,919...27,583,750
Ensembl chr11:26,015,919...26,876,185 		JBrowse link
G Sall3 spalt-like transcription factor 3 acts_upstream_of_or_within ISO MGI:3052730 (PMID:18260139) RGD PMID:18260139 NCBI chr18:76,680,997...76,700,905
Ensembl chr18:76,681,005...76,700,905 		JBrowse link
G Wnt5a Wnt family member 5A involved_in IEA
ISO 		GO_REF:0000107
(PMID:21539518) 		Ensembl
RGD		 PMID:21539518 GO_REF:0000107 NCBI chr16:3,702,300...3,724,860
Ensembl chr16:3,703,665...3,724,860 		JBrowse link
postnatal olfactory bulb interneuron migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgfr1 Fibroblast growth factor receptor 1 IMP RGD PMID:20083104 RGD:2325172 NCBI chr16:73,194,631...73,249,855
Ensembl chr16:73,194,631...73,249,855 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20667
    developmental process 7292
      anatomical structure development 6775
        olfactory bulb development 53
          olfactory bulb interneuron differentiation 21
            olfactory bulb interneuron development + 11
            olfactory bulb interneuron fate commitment 0
Path 2
Term Annotations click to browse term
  biological_process 20667
    developmental process 7292
      anatomical structure development 6775
        multicellular organism development 5421
          system development 4700
            nervous system development 2935
              central nervous system development 1250
                brain development 916
                  forebrain development 564
                    telencephalon development 390
                      olfactory lobe development 56
                        olfactory bulb development 53
                          olfactory bulb interneuron differentiation 21
                            olfactory bulb interneuron development + 11
                            olfactory bulb interneuron fate commitment 0
paths to the root