ONTOLOGY REPORT - ANNOTATIONS |
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Term: | hypothalamus development |
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Accession: | GO:0021854
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browse the term
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Definition: | The progression of the hypothalamus region of the forebrain, from its initial formation to its mature state. |
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Bax |
BCL2 associated X, apoptosis regulator |
acts_upstream_of_or_within |
ISO |
MGI:1857429 (MGI:3054131|PMID:15342910) |
RGD |
PMID:15342910 |
MGI:3054131 |
NCBI chr 1:95,940,001...95,945,407
Ensembl chr 1:95,938,808...95,945,368
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Crh |
corticotropin releasing hormone |
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IEP |
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RGD |
PMID:20002962 |
RGD:5130950 |
NCBI chr 2:102,143,055...102,144,919
Ensembl chr 2:102,143,055...102,144,919
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Crhr1 |
corticotropin releasing hormone receptor 1 |
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IEP |
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RGD |
PMID:20002962 |
RGD:5130950 |
NCBI chr10:89,040,203...89,083,481
Ensembl chr10:89,040,203...89,083,481
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Crhr2 |
corticotropin releasing hormone receptor 2 |
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IEP |
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RGD |
PMID:20002962 |
RGD:5130950 |
NCBI chr 4:84,222,897...84,265,924
Ensembl chr 4:84,224,002...84,265,904
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Ctnnb1 |
catenin beta 1 |
involved_in |
ISO IEA |
MGI:1858008 (MGI:6460489|PMID:32868762) GO_REF:0000107 |
RGD Ensembl |
PMID:32868762 |
GO_REF:0000107 MGI:6460489 |
NCBI chr 8:120,640,008...120,667,110
Ensembl chr 8:120,639,995...120,667,111
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Cyp19a1 |
cytochrome P450, family 19, subfamily a, polypeptide 1 |
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IEP |
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RGD |
PMID:15804399 |
RGD:4891928 |
NCBI chr 8:54,553,165...54,580,758
Ensembl chr 8:54,553,165...54,580,758
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Esr2 |
estrogen receptor 2 |
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IEP |
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RGD |
PMID:12960049 |
RGD:1582276 |
NCBI chr 6:94,858,438...94,909,630
Ensembl chr 6:94,809,547...94,908,919
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Ets1 |
ETS proto-oncogene 1, transcription factor |
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IEP |
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RGD |
PMID:8946059 |
RGD:2313681 |
NCBI chr 8:31,045,909...31,168,010
Ensembl chr 8:31,045,945...31,168,010
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Gsx1 |
GS homeobox 1 |
acts_upstream_of_or_within |
ISO |
MGI:2154448 (MGI:79250|PMID:8631293) |
RGD |
PMID:8631293 |
MGI:79250 |
NCBI chr12:7,881,460...7,882,753
Ensembl chr12:7,881,460...7,882,753
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Myc |
MYC proto-oncogene, bHLH transcription factor |
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IEP |
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RGD |
PMID:23291449 |
RGD:7207858 |
NCBI chr 7:93,593,705...93,598,633
Ensembl chr 7:93,593,705...93,598,630
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Ncoa1 |
nuclear receptor coactivator 1 |
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IEP |
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RGD |
PMID:12551846 |
RGD:5688241 |
NCBI chr 6:27,232,609...27,507,992
Ensembl chr 6:27,232,611...27,475,664
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Nkx2-1 |
NK2 homeobox 1 |
involved_in |
ISO IEA |
MGI:5302534 (MGI:6460489|PMID:32868762) GO_REF:0000107 |
RGD Ensembl |
PMID:32868762 |
GO_REF:0000107 MGI:6460489 |
NCBI chr 6:73,996,601...74,001,483
Ensembl chr 6:73,996,601...73,999,791
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Nkx2-6 |
NK2 homeobox 6 |
acts_upstream_of_or_within involved_in |
ISO |
(PMID:9621431) (MGI:1267297|PMID:9621431) |
RGD |
PMID:9621431 |
MGI:1267297 |
NCBI chr15:44,443,151...44,447,248
Ensembl chr15:44,443,101...44,447,247
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Rab3gap1 |
RAB3 GTPase activating protein catalytic subunit 1 |
involved_in |
ISO |
(PMID:20512159) |
RGD |
PMID:20512159 |
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NCBI chr13:39,355,698...39,429,154
Ensembl chr13:39,352,247...39,429,169
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Rax |
retina and anterior neural fold homeobox |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:1856862 (MGI:54368|PMID:925203) |
Ensembl RGD |
PMID:925203 |
GO_REF:0000107 MGI:54368 |
NCBI chr18:59,463,737...59,467,431
Ensembl chr18:59,463,737...59,467,431
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Reln |
reelin |
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IEP |
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RGD |
PMID:10436054 |
RGD:634730 |
NCBI chr 4:12,736,177...13,162,956
Ensembl chr 4:12,736,130...13,162,211
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Sox3 |
SRY-box transcription factor 3 |
involved_in |
ISO |
(MGI:3033563|PMID:14981518) |
RGD |
PMID:14981518 |
MGI:3033563 |
NCBI chr X:139,308,608...139,310,734
Ensembl chr X:139,309,329...139,310,678
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Srd5a1 |
steroid 5 alpha-reductase 1 |
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IEP |
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RGD |
PMID:15804399 PMID:8770891 |
RGD:4891928, RGD:4892048 |
NCBI chr 1:33,686,069...33,720,468
Ensembl chr 1:33,686,391...33,720,461
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Srd5a2 |
steroid 5 alpha-reductase 2 |
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IEP |
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RGD |
PMID:15804399 |
RGD:4891928 |
NCBI chr 6:21,426,225...21,465,727
Ensembl chr 6:21,426,215...21,462,112
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Uqcrq |
ubiquinol-cytochrome c reductase, complex III subunit VII |
acts_upstream_of_or_within involved_in |
ISO |
(PMID:16901643) (MGI:3662936|PMID:16901643) |
RGD |
PMID:16901643 |
MGI:3662936 |
NCBI chr10:37,585,864...37,589,328
Ensembl chr10:37,586,888...37,589,169
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Ndnf |
neuron-derived neurotrophic factor |
involved_in |
ISO |
(MGI:6442643|PMID:31883645) |
RGD |
PMID:31883645 |
MGI:6442643 |
NCBI chr 4:94,944,749...94,987,414
Ensembl chr 4:94,944,360...94,981,873
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Nrp1 |
neuropilin 1 |
involved_in |
ISO |
(MGI:4850173|PMID:21059704) |
RGD |
PMID:21059704 |
MGI:4850173 |
NCBI chr19:56,359,455...56,514,628
Ensembl chr19:56,359,455...56,513,633
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Nrp2 |
neuropilin 2 |
involved_in |
ISO |
(MGI:4850173|PMID:21059704) |
RGD |
PMID:21059704 |
MGI:4850173 |
NCBI chr 9:64,122,815...64,238,007
Ensembl chr 9:64,123,132...64,237,958
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Plxna1 |
plexin A1 |
involved_in |
ISO |
UniProtKB:P70208 (MGI:6389759|PMID:31690636) |
RGD |
PMID:31690636 |
MGI:6389759 |
NCBI chr 4:121,737,934...121,782,901
Ensembl chr 4:121,737,945...122,024,196
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Plxna3 |
plexin A3 |
involved_in |
ISO |
UniProtKB:P70206 (MGI:6389759|PMID:31690636) |
RGD |
PMID:31690636 |
MGI:6389759 |
NCBI chr X:152,115,699...152,131,608
Ensembl chr X:152,115,819...152,131,603
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Sema3a |
semaphorin 3A |
involved_in |
ISO |
(MGI:4850173|PMID:21059704) |
RGD |
PMID:21059704 |
MGI:4850173 |
NCBI chr 4:21,282,398...21,754,834
Ensembl chr 4:21,287,982...21,494,432
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Sema3e |
semaphorin 3E |
involved_in |
ISO |
(PMID:25985275) |
RGD |
PMID:25985275 |
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NCBI chr 4:20,297,534...20,555,287
Ensembl chr 4:20,299,718...20,555,229
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Hap1 |
huntingtin-associated protein 1 |
involved_in |
IEA ISO |
GO_REF:0000107 (MGI:5560429|PMID:24355921) |
Ensembl RGD |
PMID:24355921 |
GO_REF:0000107 MGI:5560429 |
NCBI chr10:85,277,890...85,286,126
Ensembl chr10:85,277,890...85,286,126
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Otp |
orthopedia homeobox |
acts_upstream_of_or_within |
ISO |
MGI:2180541 (MGI:1347696|PMID:10557207) |
RGD |
PMID:10557207 |
MGI:1347696 |
NCBI chr 2:26,108,158...26,116,359
Ensembl chr 2:26,108,163...26,116,359
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Pou3f2 |
POU class 3 homeobox 2 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:1857996 (MGI:77941|PMID:8543156) |
Ensembl RGD |
PMID:8543156 |
GO_REF:0000107 MGI:77941 |
NCBI chr 5:36,077,930...36,083,838
Ensembl chr 5:36,077,930...36,083,838
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Prdm13 |
PR/SET domain 13 |
involved_in |
ISO |
(MGI:6836711|PMID:34730112) |
RGD |
PMID:34730112 |
MGI:6836711 |
NCBI chr 5:35,220,815...35,233,641
Ensembl chr 5:35,225,435...35,232,881
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Prop1 |
PROP paired-like homeobox 1 |
acts_upstream_of_or_within |
ISO |
MGI:1856842 (MGI:85929|PMID:9067988) |
RGD |
PMID:9067988 |
MGI:85929 |
NCBI chr10:35,271,959...35,274,434
Ensembl chr10:35,271,973...35,274,434
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Foxb1 |
forkhead box B1 |
involved_in |
ISO |
(MGI:4887555|PMID:19046377) |
RGD |
PMID:19046377 |
MGI:4887555 |
NCBI chr 8:70,407,221...70,409,841
Ensembl chr 8:70,408,186...70,409,781
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Pitx2 |
paired-like homeodomain 2 |
acts_upstream_of_or_within |
ISO |
MGI:1857846 (MGI:3790896|PMID:18206388) |
RGD |
PMID:18206388 |
MGI:3790896 |
NCBI chr 2:217,717,738...217,737,293
Ensembl chr 2:217,717,693...217,737,293
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Nhlh2 |
nescient helix loop helix 2 |
acts_upstream_of_or_within_positive_effect |
ISO |
(MGI:5504302|PMID:23785158) |
RGD |
PMID:23785158 |
MGI:5504302 |
NCBI chr 2:189,444,287...189,449,625
Ensembl chr 2:189,442,711...189,449,625
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Ubb |
ubiquitin B |
acts_upstream_of_or_within |
ISO |
MGI:3774112 (MGI:3776935|PMID:18299572) |
RGD |
PMID:18299572 |
MGI:3776935 |
NCBI chr10:47,247,629...47,249,335
Ensembl chr10:47,245,637...47,249,333
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