Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)

ONTOLOGY REPORT - ANNOTATIONS

Term:interneuron migration from the subpallium to the cortex
go back to main search page
Accession:GO:0021830 term browser browse the term
Definition:The directed movement of interneurons from the subpallium to the cortex during forebrain development.


show annotations for term's descendants           Sort by:
interneuron migration from the subpallium to the cortex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARL13B ADP ribosylation factor like GTPase 13B involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:165,829,772...165,910,959
Ensembl chr13:165,828,059...165,910,961 		JBrowse link
cerebral cortex GABAergic interneuron migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARX aristaless related homeobox acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr  X:21,067,631...21,079,850
Ensembl chr  X:21,067,621...21,079,723 		JBrowse link
G CNTN2 contactin 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 9:65,737,488...65,776,412
Ensembl chr 9:65,736,740...65,776,396 		JBrowse link
G DRD1 dopamine receptor D1 acts_upstream_of_or_within ISO (PMID:17409246) MGI PMID:17409246 NCBI chr16:49,189,555...49,193,722
Ensembl chr16:49,189,602...49,191,976 		JBrowse link
G DRD2 dopamine receptor D2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 9:41,068,618...41,135,262
Ensembl chr 9:41,068,779...41,133,599 		JBrowse link
G FEZF2 FEZ family zinc finger 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr13:43,953,914...43,958,419
Ensembl chr13:43,953,910...43,957,473 		JBrowse link
G LHX6 LIM homeobox 6 acts_upstream_of_or_within ISO (PMID:17376969) MGI PMID:17376969 NCBI chr 1:262,297,557...262,322,777
Ensembl chr 1:262,295,353...262,322,530 		JBrowse link
chemorepulsion involved in interneuron migration from the subpallium to the cortex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NRG1 neuregulin 1 acts_upstream_of_or_within ISO (PMID:22376909) MGI PMID:22376909 NCBI chr15:52,625,550...53,688,003
Ensembl chr15:52,630,679...52,839,505 		JBrowse link
G NRG3 neuregulin 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr14:83,316,962...84,405,347
Ensembl chr14:83,317,019...84,402,943 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 18944
    developmental process 6793
      anatomical structure development 6374
        telencephalon development 382
          telencephalon cell migration 71
            substrate-independent telencephalic tangential migration 13
              substrate-independent telencephalic tangential interneuron migration 13
                interneuron migration from the subpallium to the cortex 9
                  cerebral cortex GABAergic interneuron migration 6
                  directional guidance of interneurons involved in migration from the subpallium to the cortex + 2
                  interneuron-substratum interaction involved in interneuron migration from the subpallium to the cortex 0
                  motogenic signaling involved in interneuron migration from the subpallium to the cortex 0
Path 2
Term Annotations click to browse term
  biological_process 18944
    developmental process 6793
      anatomical structure development 6374
        multicellular organism development 5143
          system development 4491
            nervous system development 2814
              central nervous system development 1209
                brain development 892
                  forebrain development 554
                    forebrain cell migration 74
                      telencephalon cell migration 71
                        substrate-independent telencephalic tangential migration 13
                          substrate-independent telencephalic tangential interneuron migration 13
                            interneuron migration from the subpallium to the cortex 9
                              cerebral cortex GABAergic interneuron migration 6
                              directional guidance of interneurons involved in migration from the subpallium to the cortex + 2
                              interneuron-substratum interaction involved in interneuron migration from the subpallium to the cortex 0
                              motogenic signaling involved in interneuron migration from the subpallium to the cortex 0
paths to the root