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ONTOLOGY REPORT - ANNOTATIONS


Term:cerebral cortex radially oriented cell migration
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Accession:GO:0021799 term browser browse the term
Definition:The migration of cells in the developing cerebral cortex in which cells move from the ventricular and/or subventricular zone toward the surface of the brain.


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cerebral cortex radially oriented cell migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccdc141 coiled-coil domain containing 141 acts_upstream_of_or_within ISO (MGI:4868565|PMID:20956536) RGD PMID:20956536 MGI:4868565 NCBI chr 3:63,865,240...64,024,208
Ensembl chr 3:63,863,951...64,024,205
JBrowse link
G Cdk5r1 cyclin-dependent kinase 5 regulatory subunit 1 involved_in ISO (MGI:4821185|PMID:20624590) RGD PMID:20624590 MGI:4821185 NCBI chr10:67,862,054...67,863,255
Ensembl chr10:67,862,054...67,863,255
JBrowse link
G Cul5 cullin 5 acts_upstream_of_or_within ISO (MGI:5545793|PMID:24210661) RGD PMID:24210661 MGI:5545793 NCBI chr 8:58,199,992...58,255,149
Ensembl chr 8:58,202,821...58,253,688
JBrowse link
G Dab1 DAB adaptor protein 1 acts_upstream_of_or_within IMP
ISO
MGI:1337096|MGI:1861918 (MGI:1098179|PMID:9338785), (MGI:5545793|PMID:24210661) RGD PMID:9338785 PMID:24210661, PMID:18160654 MGI:1098179 MGI:5545793, RGD:2324689 NCBI chr 5:123,154,360...124,279,170
Ensembl chr 5:123,905,166...124,280,115
JBrowse link
G Disc1 DISC1 scaffold protein involved_in ISO (MGI:4821185|PMID:20624590) RGD PMID:20624590 MGI:4821185 NCBI chr19:57,818,838...58,069,992
Ensembl chr19:57,820,260...58,066,152
JBrowse link
G Dixdc1 DIX domain containing 1 involved_in IEA
ISO
GO_REF:0000107
(MGI:4821185|PMID:20624590)
Ensembl
RGD
PMID:20624590 GO_REF:0000107 MGI:4821185 NCBI chr 8:55,091,232...55,164,636
Ensembl chr 8:55,091,235...55,162,421
JBrowse link
G Fbxo45 F-box protein 45 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3849742 (MGI:3849342|PMID:19398581)
Ensembl
RGD
PMID:19398581 GO_REF:0000107 MGI:3849342 NCBI chr11:71,795,977...71,811,858
Ensembl chr11:71,796,282...71,808,498
JBrowse link
G Fut10 fucosyltransferase 10 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:5532797|PMID:23986452)
Ensembl
RGD
PMID:23986452 GO_REF:0000107 MGI:5532797 NCBI chr16:64,623,246...64,716,248
Ensembl chr16:64,631,264...64,716,224
JBrowse link
G Lhx6 LIM homeobox 6 acts_upstream_of_or_within ISO MGI:3702518 (MGI:3702257|PMID:17376969) RGD PMID:17376969 MGI:3702257 NCBI chr 3:15,409,349...15,433,504
Ensembl chr 3:15,411,939...15,433,252
JBrowse link
G Mdga1 MAM domain containing glycosylphosphatidylinositol anchor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:4878863 (MGI:4866945|PMID:21104742)
Ensembl
RGD
PMID:21104742 GO_REF:0000107 MGI:4866945 NCBI chr20:8,515,142...8,574,632
Ensembl chr20:8,515,142...8,574,082
JBrowse link
G Ndel1 nudE neurodevelopment protein 1-like 1 involved_in ISO (MGI:4821185|PMID:20624590) RGD PMID:20624590 MGI:4821185 NCBI chr10:55,398,919...55,456,654
Ensembl chr10:55,411,901...55,444,861
JBrowse link
G Pou3f2 POU class 3 homeobox 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:102564 (MGI:2183078|PMID:12130536)
Ensembl
RGD
PMID:12130536 GO_REF:0000107 MGI:2183078 NCBI chr 5:36,677,452...36,683,356
Ensembl chr 5:36,681,528...36,683,356
JBrowse link
G Pou3f3 POU class 3 homeobox 3 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:101895 (MGI:2183078|PMID:12130536)
Ensembl
RGD
PMID:12130536 GO_REF:0000107 MGI:2183078 NCBI chr 9:49,479,148...49,482,246
Ensembl chr 9:49,479,023...49,482,252
JBrowse link
G Rac1 Rac family small GTPase 1 acts_upstream_of_or_within ISO MGI:1932522|MGI:2663662 (MGI:3709518|PMID:17409253) RGD PMID:17409253 MGI:3709518 NCBI chr12:13,090,316...13,111,841
Ensembl chr12:13,090,172...13,111,873
JBrowse link
G Rnf7 ring finger protein 7 acts_upstream_of_or_within ISO MGI:108554 (MGI:5545793|PMID:24210661) RGD PMID:24210661 MGI:5545793 NCBI chr 8:104,326,719...104,336,098
Ensembl chr 8:104,326,719...104,335,729
JBrowse link
G Socs7 suppressor of cytokine signaling 7 acts_upstream_of_or_within ISO (MGI:5545793|PMID:24210661) RGD PMID:24210661 MGI:5545793 NCBI chr10:85,301,797...85,337,971
Ensembl chr10:85,301,875...85,330,397
JBrowse link
cell motility involved in cerebral cortex radial glia guided migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dab2ip DAB2 interacting protein involved_in ISS
ISO
IEA
GO_REF:0000024
(MGI:5463669|PMID:23056358)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:23056358 GO_REF:0000024 GO_REF:0000107 MGI:5463669 NCBI chr 3:14,889,263...15,060,286
Ensembl chr 3:14,889,510...15,060,286
JBrowse link
cell-cell adhesion involved in neuronal-glial interactions involved in cerebral cortex radial glia guided migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dab1 DAB adaptor protein 1 acts_upstream_of_or_within ISO MGI:1856801 (MGI:3042322|PMID:15091337) RGD PMID:15091337 MGI:3042322 NCBI chr 5:123,154,360...124,279,170
Ensembl chr 5:123,905,166...124,280,115
JBrowse link
cerebral cortex radial glia-guided migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adgrg1 adhesion G protein-coupled receptor G1 involved_in ISS
ISO
GO_REF:0000024
(MGI:3796260|PMID:18509043)
UniProt
RGD
PMID:18509043 GO_REF:0000024 MGI:3796260 NCBI chr19:10,423,534...10,460,674
Ensembl chr19:10,423,501...10,460,674
JBrowse link
G Gli3 GLI family zinc finger 3 acts_upstream_of_or_within ISO MGI:1856282 (MGI:1097510|PMID:9232833) RGD PMID:9232833 MGI:1097510 NCBI chr17:52,294,942...52,569,036
Ensembl chr17:52,294,942...52,569,036
JBrowse link
G Rtn4 reticulon 4 involved_in IEA
ISO
ISS
GO_REF:0000107
(MGI:4461842|PMID:20093372)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:20093372 GO_REF:0000024 GO_REF:0000107 MGI:4461842 NCBI chr14:114,126,931...114,174,459
Ensembl chr14:114,126,943...114,174,458
JBrowse link
cytosolic calcium signaling involved in initiation of cell movement in glial-mediated radial cell migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G P2ry12 purinergic receptor P2Y12 involved_in IMP PMID:18183622
PMID:17299767
ARUK-UCL PMID:18183622, PMID:17299767 RGD:13673786, RGD:13673751 NCBI chr 2:149,440,807...149,482,592
Ensembl chr 2:149,441,598...149,444,548
JBrowse link
extension of a leading process involved in cell motility in cerebral cortex radial glia guided migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Srgap2 SLIT-ROBO Rho GTPase activating protein 2 involved_in ISS
ISO
GO_REF:0000024
(MGI:4366584|PMID:19737524)
UniProt
RGD
PMID:19737524 GO_REF:0000024 MGI:4366584 NCBI chr13:48,065,280...48,286,888
Ensembl chr13:48,068,158...48,286,720
JBrowse link
layer formation in cerebral cortex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adgrg1 adhesion G protein-coupled receptor G1 involved_in ISS
ISO
IEA
GO_REF:0000024
(MGI:3796260|PMID:18509043)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:18509043 GO_REF:0000024 GO_REF:0000107 MGI:3796260 NCBI chr19:10,423,534...10,460,674
Ensembl chr19:10,423,501...10,460,674
JBrowse link
G Cdk5 cyclin-dependent kinase 5 acts_upstream_of_or_within ISO MGI:1861809 (MGI:2149271|PMID:11517264) RGD PMID:11517264 MGI:2149271 NCBI chr 4:7,282,945...7,287,427
Ensembl chr 4:7,282,948...7,288,383
JBrowse link
G Cdk5r1 cyclin-dependent kinase 5 regulatory subunit 1 acts_upstream_of_or_within ISO MGI:1330828 (MGI:2149271|PMID:11517264) RGD PMID:11517264 MGI:2149271 NCBI chr10:67,862,054...67,863,255
Ensembl chr10:67,862,054...67,863,255
JBrowse link
G Cdk5r2 cyclin-dependent kinase 5 regulatory subunit 2 acts_upstream_of_or_within ISO MGI:101764 (MGI:2149271|PMID:11517264) RGD PMID:11517264 MGI:2149271 NCBI chr 9:82,120,059...82,121,527
Ensembl chr 9:82,120,059...82,121,527
JBrowse link
G Ctnnb1 catenin beta 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2148567|MGI:3701617 (MGI:4454697|PMID:20503375)
Ensembl
RGD
PMID:20503375 GO_REF:0000107 MGI:4454697 NCBI chr 8:129,601,511...129,628,378
Ensembl chr 8:129,617,812...129,627,372
JBrowse link
G Dab2ip DAB2 interacting protein involved_in IEA
ISO
ISS
GO_REF:0000107
(MGI:5463669|PMID:23056358)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:23056358 GO_REF:0000024 GO_REF:0000107 MGI:5463669 NCBI chr 3:14,889,263...15,060,286
Ensembl chr 3:14,889,510...15,060,286
JBrowse link
G Dcx doublecortin involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2387757 (MGI:3844387|PMID:19342486)
Ensembl
RGD
PMID:19342486 GO_REF:0000107 MGI:3844387 NCBI chr  X:115,098,675...115,175,515
Ensembl chr  X:115,098,675...115,175,299
JBrowse link
G Gli3 GLI family zinc finger 3 acts_upstream_of_or_within ISO MGI:2176173|MGI:3798847 (MGI:4949945|PMID:21525285) RGD PMID:21525285 MGI:4949945 NCBI chr17:52,294,942...52,569,036
Ensembl chr17:52,294,942...52,569,036
JBrowse link
G Lrp8 LDL receptor related protein 8 acts_upstream_of_or_within ISO MGI:109520 (MGI:3769085|PMID:17330141) RGD PMID:17330141 MGI:3769085 NCBI chr 5:127,404,348...127,476,636
Ensembl chr 5:127,404,450...127,476,641
JBrowse link
G Mboat7 membrane bound O-acyltransferase domain containing 7 acts_upstream_of_or_within ISO MGI:5509338 (MGI:5507927|PMID:23097495) RGD PMID:23097495 MGI:5507927 NCBI chr 1:64,100,159...64,114,437
Ensembl chr 1:64,101,018...64,113,792
JBrowse link
G Nr2e1 nuclear receptor subfamily 2, group E, member 1 acts_upstream_of_or_within ISO MGI:2151350 (MGI:3629819|PMID:15385616) RGD PMID:15385616 MGI:3629819 NCBI chr20:47,286,843...47,306,318
Ensembl chr20:47,288,137...47,306,318
JBrowse link
G Pafah1b1 platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 acts_upstream_of_or_within ISO MGI:1340044 (MGI:3769085|PMID:17330141) RGD PMID:17330141 MGI:3769085 NCBI chr10:61,456,144...61,577,412
Ensembl chr10:61,456,145...61,577,412
JBrowse link
G Reln reelin involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1856398 (MGI:5319303|PMID:20847152)
Ensembl
RGD
PMID:20847152 GO_REF:0000107 MGI:5319303 NCBI chr 4:9,347,533...9,774,257
Ensembl chr 4:9,347,528...9,773,670
JBrowse link
G Socs7 suppressor of cytokine signaling 7 acts_upstream_of_or_within ISO MGI:5545789 (MGI:5545793|PMID:24210661) RGD PMID:24210661 MGI:5545793 NCBI chr10:85,301,797...85,337,971
Ensembl chr10:85,301,875...85,330,397
JBrowse link
negative regulation of cell motility involved in cerebral cortex radial glia guided migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmerb1 bMERB domain containing 1 acts_upstream_of_or_within ISO (MGI:5578117|PMID:25099998) RGD PMID:25099998 MGI:5578117 NCBI chr10:3,411,380...3,570,689
Ensembl chr10:3,411,380...3,570,688
JBrowse link
neuronal-glial interaction involved in cerebral cortex radial glia guided migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lamb1 laminin subunit beta 1 involved_in ISO (PMID:23472759) RGD PMID:23472759 NCBI chr 6:50,528,796...50,596,593
Ensembl chr 6:50,528,823...50,596,079
JBrowse link
nucleokinesis involved in cell motility in cerebral cortex radial glia guided migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sun1 Sad1 and UNC84 domain containing 1 involved_in ISO (MGI:4412315|PMID:19874786) RGD PMID:19874786 MGI:4412315 NCBI chr12:17,488,482...17,533,334
Ensembl chr12:17,488,487...17,522,534
JBrowse link
G Sun2 Sad1 and UNC84 domain containing 2 involved_in ISO (MGI:4412315|PMID:19874786) RGD PMID:19874786 MGI:4412315 NCBI chr 7:120,950,391...120,967,583
Ensembl chr 7:120,951,560...120,967,490
JBrowse link
G Syne2 spectrin repeat containing nuclear envelope protein 2 involved_in ISO (MGI:4412315|PMID:19874786) RGD PMID:19874786 MGI:4412315 NCBI chr 6:98,884,269...99,153,551 JBrowse link
pyramidal neuron migration to cerebral cortex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Disc1 DISC1 scaffold protein IMP RGD PMID:16299498 RGD:5509783 NCBI chr19:57,818,838...58,069,992
Ensembl chr19:57,820,260...58,066,152
JBrowse link
G Foxg1 forkhead box G1 acts_upstream_of_or_within ISO (MGI:5440366|PMID:22726835) RGD PMID:22726835 MGI:5440366 NCBI chr 6:69,971,227...69,974,037
Ensembl chr 6:69,971,227...69,974,037
JBrowse link
G Zmiz1 zinc finger, MIZ-type containing 1 involved_in ISO (PMID:30639322) RGD PMID:30639322 NCBI chr16:1,749,191...1,954,633
Ensembl chr16:1,749,191...1,954,614
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19491
    developmental process 6765
      anatomical structure development 6191
        cerebral cortex development 152
          cerebral cortex cell migration 53
            cerebral cortex radially oriented cell migration 38
              cerebral cortex radial glia-guided migration + 26
              somal translocation + 0
Path 2
Term Annotations click to browse term
  biological_process 19491
    developmental process 6765
      anatomical structure development 6191
        multicellular organism development 5628
          system development 5300
            nervous system development 2728
              central nervous system development 1270
                brain development 976
                  forebrain development 510
                    telencephalon development 342
                      pallium development 238
                        cerebral cortex development 152
                          cerebral cortex cell migration 53
                            cerebral cortex radially oriented cell migration 38
                              cerebral cortex radial glia-guided migration + 26
                              somal translocation + 0
paths to the root