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ONTOLOGY REPORT - ANNOTATIONS

Term:cerebral cortex cell migration
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Accession:GO:0021795 term browser browse the term
Definition:The orderly movement of cells from one site to another in the cerebral cortex.


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cerebral cortex cell migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CX3CR1 C-X3-C motif chemokine receptor 1 acts_upstream_of_or_within ISO (MGI:3639805|PMID:16732273) MGI PMID:16732273 MGI:3639805 NCBI chr23:8,937,069...8,954,738
Ensembl chr23:8,938,906...8,952,808 		JBrowse link
G DAB1 DAB adaptor protein 1 acts_upstream_of_or_within ISO (MGI:3050180|PMID:15249135) MGI PMID:15249135 MGI:3050180 NCBI chr 5:51,397,837...52,505,513
Ensembl chr 5:52,231,141...52,502,336 		JBrowse link
G DIXDC1 DIX domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:21,097,000...21,168,470
Ensembl chr 5:21,100,045...21,167,166 		JBrowse link
G EFHC1 EF-hand domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:20,068,287...20,131,621
Ensembl chr12:20,067,881...20,131,619 		JBrowse link
G EGFR epidermal growth factor receptor acts_upstream_of_or_within ISO (MGI:74263|PMID:7618084) MGI PMID:7618084 MGI:74263 NCBI chr18:5,983,669...6,044,092
Ensembl chr18:5,982,770...6,042,631 		JBrowse link
G FGF13 fibroblast growth factor 13 involved_in ISO (MGI:5431268|PMID:22726441) UniProt PMID:22726441 MGI:5431268 NCBI chr  X:108,658,113...109,156,096
Ensembl chr  X:108,658,941...109,156,594 		JBrowse link
G HTR6 5-hydroxytryptamine receptor 6 involved_in ISO (MGI:5607347|PMID:25078650) UniProt PMID:25078650 MGI:5607347 NCBI chr 2:79,022,790...79,033,975
Ensembl chr 2:79,022,775...79,033,975 		JBrowse link
G LRP6 LDL receptor related protein 6 acts_upstream_of_or_within ISO (MGI:3689135|PMID:16920270) MGI PMID:16920270 MGI:3689135 NCBI chr27:34,003,334...34,166,334
Ensembl chr27:34,003,539...34,161,437 		JBrowse link
G NKX2-1 NK2 homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (MGI:3834781|PMID:18786357) Ensembl
Ensembl
MGI		 PMID:18786357 GO_REF:0000107 MGI:3834781
G PEX13 peroxisomal biogenesis factor 13 acts_upstream_of_or_within ISO (MGI:2670243|PMID:12897163) MGI PMID:12897163 MGI:2670243 NCBI chr10:61,113,213...61,130,157
Ensembl chr10:61,123,655...61,193,241 		JBrowse link
G PEX5 peroxisomal biogenesis factor 5 acts_upstream_of_or_within ISO (MGI:1096198|PMID:9288097), (MGI:1352371|PMID:10653000) MGI PMID:9288097 PMID:10653000 MGI:1096198 MGI:1352371 NCBI chr27:37,843,218...37,860,664
Ensembl chr27:37,809,717...37,860,376 		JBrowse link
G PSEN1 presenilin 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (MGI:3587130|PMID:16079160) Ensembl
Ensembl
MGI		 PMID:16079160 GO_REF:0000107 MGI:3587130 NCBI chr 8:46,495,551...46,569,532
Ensembl chr 8:46,495,624...46,569,532 		JBrowse link
G RHOA ras homolog family member A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (MGI:5316314|PMID:22405202) Ensembl
Ensembl
MGI		 PMID:22405202 GO_REF:0000107 MGI:5316314 NCBI chr20:39,824,552...39,888,089
Ensembl chr20:39,824,575...39,887,215 		JBrowse link
cell motility involved in cerebral cortex radial glia guided migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMERB1 bMERB domain containing 1 acts_upstream_of
involved_in		 ISO
IEA		 (MGI:5578117|PMID:25099998) MGI
Ensembl		 PMID:25099998 GO_REF:0000107 MGI:5578117 NCBI chr 6:28,242,190...28,356,218
Ensembl chr 6:28,225,677...28,357,180 		JBrowse link
G DAB2IP DAB2 interacting protein involved_in ISO (MGI:5463669|PMID:23056358) UniProt PMID:23056358 MGI:5463669 NCBI chr 9:60,725,887...60,918,242
Ensembl chr 9:60,726,809...60,918,139 		JBrowse link
cell-cell adhesion involved in neuronal-glial interactions involved in cerebral cortex radial glia guided migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DAB1 DAB adaptor protein 1 acts_upstream_of_or_within ISO (MGI:3042322|PMID:15091337) MGI PMID:15091337 MGI:3042322 NCBI chr 5:51,397,837...52,505,513
Ensembl chr 5:52,231,141...52,502,336 		JBrowse link
cerebral cortex radial glia-guided migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADGRG1 adhesion G protein-coupled receptor G1 involved_in ISO (MGI:3796260|PMID:18509043) UniProt PMID:18509043 MGI:3796260 NCBI chr 2:58,805,737...58,842,618
Ensembl chr 2:58,805,834...58,852,684 		JBrowse link
G GLI3 GLI family zinc finger 3 acts_upstream_of_or_within ISO (MGI:1097510|PMID:9232833) MGI PMID:9232833 MGI:1097510 NCBI chr18:7,800,817...8,071,531
Ensembl chr18:7,801,394...8,068,132 		JBrowse link
G RTN4 reticulon 4 involved_in ISO (MGI:4461842|PMID:20093372) UniProt PMID:20093372 MGI:4461842 NCBI chr10:55,884,452...55,954,476
Ensembl chr10:55,885,125...55,936,574 		JBrowse link
G WDR47 WD repeat domain 47 acts_upstream_of_or_within ISO (MGI:6095492|PMID:29078390) MGI PMID:29078390 MGI:6095492 NCBI chr 6:42,733,834...42,800,419
Ensembl chr 6:42,715,951...42,799,271 		JBrowse link
cerebral cortex radially oriented cell migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CCDC141 coiled-coil domain containing 141 acts_upstream_of_or_within ISO (MGI:4868565|PMID:20956536) MGI PMID:20956536 MGI:4868565 NCBI chr36:22,437,363...22,626,200
Ensembl chr36:22,492,052...22,625,957 		JBrowse link
G CDK5R1 cyclin dependent kinase 5 regulatory subunit 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:40,481,111...40,502,689
Ensembl chr 9:40,501,646...40,502,569 		JBrowse link
G CUL5 cullin 5 acts_upstream_of_or_within ISO (MGI:5545793|PMID:24210661) MGI PMID:24210661 MGI:5545793 NCBI chr 5:24,393,692...24,477,595
Ensembl chr 5:24,396,823...24,488,043 		JBrowse link
G DAB1 DAB adaptor protein 1 acts_upstream_of_or_within ISO (MGI:1098179|PMID:9338785)
(MGI:5545793|PMID:24210661)		 RGD
MGI		 PMID:9338785 PMID:18160654 PMID:24210661 MGI:1098179 MGI:5545793 RGD:2324689 NCBI chr 5:51,397,837...52,505,513
Ensembl chr 5:52,231,141...52,502,336 		JBrowse link
G DISC1 DISC1 scaffold protein involved_in ISO (MGI:4821185|PMID:20624590) DFLAT PMID:20624590 MGI:4821185 NCBI chr 4:7,524,336...7,825,143
Ensembl chr 4:7,524,397...7,822,558 		JBrowse link
G DIXDC1 DIX domain containing 1 involved_in IEA Ensembl
Ensembl		 GO_REF:0000107 NCBI chr 5:21,097,000...21,168,470
Ensembl chr 5:21,100,045...21,167,166 		JBrowse link
G FBXO45 F-box protein 45 acts_upstream_of_or_within ISO (MGI:3849342|PMID:19398581) MGI PMID:19398581 MGI:3849342 NCBI chr33:29,627,762...29,642,175
Ensembl chr33:29,635,831...29,639,189 		JBrowse link
G FUT10 fucosyltransferase 10 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:5532797|PMID:23986452) MGI
Ensembl
Ensembl		 PMID:23986452 GO_REF:0000107 MGI:5532797 NCBI chr16:31,186,333...31,265,463
Ensembl chr16:31,186,418...31,264,963 		JBrowse link
G LHX6 LIM homeobox 6 acts_upstream_of_or_within ISO (MGI:3702257|PMID:17376969) MGI PMID:17376969 MGI:3702257 NCBI chr 9:60,348,529...60,374,037
Ensembl chr 9:60,348,335...60,374,024 		JBrowse link
G MDGA1 MAM domain containing glycosylphosphatidylinositol anchor 1 acts_upstream_of_or_within ISO (MGI:4866945|PMID:21104742) MGI PMID:21104742 MGI:4866945 NCBI chr12:6,655,586...6,716,619
Ensembl chr12:6,659,910...6,686,760 		JBrowse link
G NDEL1 nudE neurodevelopment protein 1 like 1 involved_in ISO (MGI:4821185|PMID:20624590) DFLAT PMID:20624590 MGI:4821185 NCBI chr 5:33,187,614...33,244,483
Ensembl chr 5:33,204,452...33,266,052 		JBrowse link
G POU3F2 POU class 3 homeobox 2 acts_upstream_of_or_within ISO (MGI:2183078|PMID:12130536) MGI PMID:12130536 MGI:2183078 NCBI chr12:57,103,712...57,108,522 JBrowse link
G POU3F3 POU class 3 homeobox 3 acts_upstream_of_or_within ISO (MGI:2183078|PMID:12130536) MGI PMID:12130536 MGI:2183078 NCBI chr10:38,513,872...38,517,692
Ensembl chr10:38,513,013...38,514,684 		JBrowse link
G RAC1 Rac family small GTPase 1 acts_upstream_of_or_within ISO (MGI:3709518|PMID:17409253) MGI PMID:17409253 MGI:3709518 NCBI chr 6:11,726,259...11,758,532
Ensembl chr 6:11,655,494...11,757,216 		JBrowse link
G RNF7 ring finger protein 7 acts_upstream_of_or_within ISO (MGI:5545793|PMID:24210661) MGI PMID:24210661 MGI:5545793 NCBI chr23:37,578,222...37,584,862
Ensembl chr23:37,578,273...37,584,523 		JBrowse link
G SOCS7 suppressor of cytokine signaling 7 acts_upstream_of_or_within ISO (MGI:5545793|PMID:24210661) MGI PMID:24210661 MGI:5545793 NCBI chr 9:23,775,349...23,809,325
Ensembl chr 9:23,776,827...23,803,994 		JBrowse link
cerebral cortex tangential migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARX aristaless related homeobox acts_upstream_of_or_within ISO (MGI:3709215|PMID:17460091) MGI PMID:17460091 MGI:3709215 NCBI chr  X:20,545,346...20,556,206
Ensembl chr  X:20,545,346...20,556,206 		JBrowse link
G FBXO45 F-box protein 45 acts_upstream_of_or_within ISO (MGI:3849342|PMID:19398581) MGI PMID:19398581 MGI:3849342 NCBI chr33:29,627,762...29,642,175
Ensembl chr33:29,635,831...29,639,189 		JBrowse link
G LHX6 LIM homeobox 6 acts_upstream_of_or_within ISO (MGI:3702257|PMID:17376969) MGI PMID:17376969 MGI:3702257 NCBI chr 9:60,348,529...60,374,037
Ensembl chr 9:60,348,335...60,374,024 		JBrowse link
G RELN reelin acts_upstream_of_or_within ISO (MGI:3701699|PMID:16901480) MGI PMID:16901480 MGI:3701699 NCBI chr18:16,275,822...16,773,875
Ensembl chr18:16,275,837...16,773,875 		JBrowse link
chemorepulsion involved in postnatal olfactory bulb interneuron migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ROBO1 roundabout guidance receptor 1 involved_in IEA Ensembl
Ensembl		 GO_REF:0000107 NCBI chr31:8,082,363...8,594,623
Ensembl chr31:7,626,126...8,593,728 		JBrowse link
G SLIT2 slit guidance ligand 2 involved_in IEA Ensembl
Ensembl		 GO_REF:0000107 NCBI chr 3:88,964,707...89,311,817
Ensembl chr 3:88,966,232...89,312,955 		JBrowse link
cytosolic calcium signaling involved in initiation of cell movement in glial-mediated radial cell migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G P2RY12 purinergic receptor P2Y12 involved_in ISO PMID:18183622
PMID:17299767		 ARUK-UCL PMID:17299767 PMID:18183622 RGD:13673751 RGD:13673786 NCBI chr23:45,908,574...45,954,675
Ensembl chr23:45,909,485...45,910,526 		JBrowse link
extension of a leading process involved in cell motility in cerebral cortex radial glia guided migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SRGAP2 SLIT-ROBO Rho GTPase activating protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr38:2,506,617...2,741,866 JBrowse link
layer formation in cerebral cortex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADGRG1 adhesion G protein-coupled receptor G1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:58,805,737...58,842,618
Ensembl chr 2:58,805,834...58,852,684 		JBrowse link
G CDK5 cyclin dependent kinase 5 acts_upstream_of_or_within ISO (MGI:2149271|PMID:11517264) MGI PMID:11517264 MGI:2149271 NCBI chr16:15,105,177...15,113,085
Ensembl chr16:15,101,230...15,109,269 		JBrowse link
G CDK5R1 cyclin dependent kinase 5 regulatory subunit 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:2149271|PMID:11517264) MGI
Ensembl
Ensembl		 PMID:11517264 GO_REF:0000107 MGI:2149271 NCBI chr 9:40,481,111...40,502,689
Ensembl chr 9:40,501,646...40,502,569 		JBrowse link
G CDK5R2 cyclin dependent kinase 5 regulatory subunit 2 acts_upstream_of_or_within ISO (MGI:2149271|PMID:11517264) MGI PMID:11517264 MGI:2149271 NCBI chr37:25,528,934...25,535,795
Ensembl chr37:25,529,151...25,530,263 		JBrowse link
G COL3A1 collagen type III alpha 1 chain involved_in ISO (MGI:6229268|PMID:22235340) MGI PMID:22235340 MGI:6229268 NCBI chr36:30,488,250...30,526,367
Ensembl chr36:30,488,488...30,536,765 		JBrowse link
G CTNNB1 catenin beta 1 acts_upstream_of_or_within ISO (MGI:4454697|PMID:20503375) MGI PMID:20503375 MGI:4454697 NCBI chr23:10,559,722...10,572,933
Ensembl chr23:10,559,718...10,572,927 		JBrowse link
G DAB2IP DAB2 interacting protein involved_in ISO (MGI:5463669|PMID:23056358) UniProt PMID:23056358 MGI:5463669 NCBI chr 9:60,725,887...60,918,242
Ensembl chr 9:60,726,809...60,918,139 		JBrowse link
G DCX doublecortin acts_upstream_of_or_within ISO (MGI:3844387|PMID:19342486) MGI PMID:19342486 MGI:3844387 NCBI chr  X:84,408,762...84,541,157
Ensembl chr  X:84,408,895...84,517,827 		JBrowse link
G GLI3 GLI family zinc finger 3 acts_upstream_of_or_within ISO (MGI:4949945|PMID:21525285) MGI PMID:21525285 MGI:4949945 NCBI chr18:7,800,817...8,071,531
Ensembl chr18:7,801,394...8,068,132 		JBrowse link
G LRP8 LDL receptor related protein 8 acts_upstream_of_or_within ISO (MGI:3769085|PMID:17330141) MGI PMID:17330141 MGI:3769085 NCBI chr 5:55,604,878...55,684,666
Ensembl chr 5:55,604,878...55,699,736 		JBrowse link
G MBOAT7 membrane bound O-acyltransferase domain containing 7 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:5507927|PMID:23097495) MGI
Ensembl
Ensembl		 PMID:23097495 GO_REF:0000107 MGI:5507927 NCBI chr 1:103,028,000...103,040,299
Ensembl chr 1:103,028,002...103,040,167 		JBrowse link
G NR2E1 nuclear receptor subfamily 2 group E member 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3629819|PMID:15385616) MGI
Ensembl
Ensembl		 PMID:15385616 GO_REF:0000107 MGI:3629819 NCBI chr12:65,209,177...65,230,274
Ensembl chr12:65,209,542...65,228,998 		JBrowse link
G PAFAH1B1 platelet activating factor acetylhydrolase 1b regulatory subunit 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (MGI:3769085|PMID:17330141) Ensembl
MGI		 PMID:17330141 GO_REF:0000107 MGI:3769085 NCBI chr 9:46,648,057...46,731,259
Ensembl chr 9:46,648,052...46,771,400 		JBrowse link
G RELN reelin acts_upstream_of_or_within ISO (MGI:5319303|PMID:20847152) MGI PMID:20847152 MGI:5319303 NCBI chr18:16,275,822...16,773,875
Ensembl chr18:16,275,837...16,773,875 		JBrowse link
G SOCS7 suppressor of cytokine signaling 7 acts_upstream_of_or_within ISO (MGI:5545793|PMID:24210661) MGI PMID:24210661 MGI:5545793 NCBI chr 9:23,775,349...23,809,325
Ensembl chr 9:23,776,827...23,803,994 		JBrowse link
motogenic signaling involved in postnatal olfactory bulb interneuron migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FGFR1 fibroblast growth factor receptor 1 ISO RGD PMID:20083104 RGD:2325172 NCBI chr16:27,029,902...27,080,514
Ensembl chr16:27,031,588...27,078,261 		JBrowse link
negative regulation of cell motility involved in cerebral cortex radial glia guided migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMERB1 bMERB domain containing 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (MGI:5578117|PMID:25099998) Ensembl
Ensembl
MGI		 PMID:25099998 GO_REF:0000107 MGI:5578117 NCBI chr 6:28,242,190...28,356,218
Ensembl chr 6:28,225,677...28,357,180 		JBrowse link
neuronal-glial interaction involved in cerebral cortex radial glia guided migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LAMB1 laminin subunit beta 1 involved_in ISO (PMID:23472759) UniProt PMID:23472759 NCBI chr18:12,634,640...12,700,311
Ensembl chr18:12,630,554...12,700,308 		JBrowse link
nucleokinesis involved in cell motility in cerebral cortex radial glia guided migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SUN1 Sad1 and UNC84 domain containing 1 involved_in ISO (MGI:4412315|PMID:19874786) UniProt PMID:19874786 MGI:4412315 NCBI chr 6:15,996,061...16,047,788
Ensembl chr 6:15,997,488...16,047,687 		JBrowse link
G SUN2 Sad1 and UNC84 domain containing 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:26,055,508...26,074,972
Ensembl chr10:26,055,536...26,074,434 		JBrowse link
G SYNE2 spectrin repeat containing nuclear envelope protein 2 involved_in ISO (MGI:4412315|PMID:19874786) UniProt PMID:19874786 MGI:4412315 NCBI chr 8:38,373,900...38,643,544
Ensembl chr 8:38,373,964...38,643,240 		JBrowse link
pyramidal neuron migration to cerebral cortex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DISC1 DISC1 scaffold protein ISO RGD PMID:16299498 RGD:5509783 NCBI chr 4:7,524,336...7,825,143
Ensembl chr 4:7,524,397...7,822,558 		JBrowse link
G FOXG1 forkhead box G1 acts_upstream_of_or_within ISO (MGI:5440366|PMID:22726835) MGI PMID:22726835 MGI:5440366 NCBI chr 8:8,276,300...8,279,785 JBrowse link
G ZMIZ1 zinc finger MIZ-type containing 1 involved_in IEA Ensembl
Ensembl		 GO_REF:0000107 NCBI chr 4:28,807,368...29,035,946
Ensembl chr 4:28,854,908...29,045,986 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 16481
    developmental process 6578
      anatomical structure development 6151
        cerebral cortex development 169
          cerebral cortex cell migration 55
            cerebral cortex radially oriented cell migration + 40
            cerebral cortex tangential migration + 7
Path 2
Term Annotations click to browse term
  biological_process 16481
    developmental process 6578
      anatomical structure development 6151
        multicellular organism development 5265
          system development 4778
            nervous system development 2717
              central nervous system development 1285
                brain development 996
                  forebrain development 539
                    telencephalon development 369
                      pallium development 255
                        cerebral cortex development 169
                          cerebral cortex cell migration 55
                            cerebral cortex radially oriented cell migration + 40
                            cerebral cortex tangential migration + 7
paths to the root