ONTOLOGY REPORT - ANNOTATIONS
Term: substantia nigra development
Accession: GO:0021762
browse the term
Definition: The progression of the substantia nigra over time from its initial formation until its mature state. The substantia nigra is the layer of gray substance that separates the posterior parts of the cerebral peduncles (tegmentum mesencephali) from the anterior parts; it normally includes a posterior compact part with many pigmented cells (pars compacta) and an anterior reticular part whose cells contain little pigment (pars reticularis).
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ACTB
actin beta
involved_in
ISO
(PMID:22926577)
UniProt
PMID:22926577
NCBI chr 6:12,421,006...12,424,449
Ensembl chr 6:12,418,932...12,462,845
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ATP5PF
ATP synthase peripheral stalk subunit F6
involved_in
ISO
(PMID:22926577)
UniProt
PMID:22926577
NCBI chr31:21,207,080...21,212,220
Ensembl chr31:21,200,337...21,215,975
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BASP1
brain abundant membrane attached signal protein 1
involved_in
ISO
(PMID:22926577)
UniProt
PMID:22926577
NCBI chr 4:86,360,641...86,417,408
Ensembl chr 4:86,361,608...86,382,715
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CALM1
calmodulin 1
involved_in
ISO
(PMID:22926577)
UniProt
PMID:22926577
NCBI chr 8:61,398,231...61,408,874
Ensembl chr 8:61,398,244...61,406,195
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CALM2
calmodulin 2
involved_in
ISO
(PMID:22926577)
UniProt
PMID:22926577
NCBI chr10:49,299,698...49,314,533
Ensembl chr10:49,299,897...49,314,457
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CALM3
calmodulin 3
involved_in
ISO
(PMID:22926577)
UniProt
PMID:22926577
NCBI chr 1:109,284,729...109,294,491
Ensembl chr 1:109,286,155...109,294,391
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CCDC14
coiled-coil domain containing 14
involved_in
ISO
(PMID:22926577)
UniProt
PMID:22926577
NCBI chr33:26,958,752...27,009,159
Ensembl chr33:26,959,430...27,009,436
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CNP
2',3'-cyclic nucleotide 3' phosphodiesterase
involved_in
ISO
(PMID:22926577)
UniProt
PMID:22926577
NCBI chr 9:20,888,350...20,896,139
Ensembl chr 9:20,886,574...20,896,079
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DYNLL1
dynein light chain LC8-type 1
involved_in
ISO
(PMID:22926577)
UniProt
PMID:22926577
NCBI chr26:16,369,878...16,402,302
Ensembl chr26:16,398,886...16,402,021 Ensembl chr26:16,398,886...16,402,021
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ENO3
enolase 3
involved_in
ISO
(PMID:22926577)
UniProt
PMID:22926577
NCBI chr 5:31,662,284...31,667,498
Ensembl chr 5:31,662,285...31,834,968
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FGF2
fibroblast growth factor 2
acts_upstream_of_or_within
ISO
(MGI:3696489|PMID:17234579)
MGI
PMID:17234579
MGI:3696489
NCBI chr19:17,403,288...17,463,143
Ensembl chr19:16,994,661...17,463,151
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FGF9
fibroblast growth factor 9
involved_in
ISO
(PMID:22926577)
UniProt
PMID:22926577
NCBI chr25:16,630,321...16,665,935
Ensembl chr25:16,632,812...16,663,550
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FGFR3
fibroblast growth factor receptor 3
acts_upstream_of_or_within
ISO
(MGI:3696489|PMID:17234579)
MGI
PMID:17234579
MGI:3696489
NCBI chr 3:62,309,128...62,318,932
Ensembl chr 3:62,303,756...62,323,896
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G6PD
glucose-6-phosphate dehydrogenase
involved_in
ISO
(PMID:22926577)
UniProt
PMID:22926577
NCBI chr X:122,217,317...122,231,862
Ensembl chr X:122,205,683...122,231,678
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GLUD1
glutamate dehydrogenase 1
involved_in
ISO
(PMID:22926577)
UniProt
PMID:22926577
NCBI chr 4:34,629,046...34,662,711
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GNB4
G protein subunit beta 4
involved_in
ISO
(PMID:22926577)
UniProt
PMID:22926577
NCBI chr34:12,818,063...12,849,822
Ensembl chr34:12,822,104...12,876,865
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H2BC12
H2B clustered histone 12
involved_in
ISO
(PMID:22926577)
UniProt
PMID:22926577
NCBI chr35:24,556,368...24,558,216
Ensembl chr35:24,557,784...24,558,164
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HSPA5
heat shock protein family A (Hsp70) member 5
involved_in
ISO
(PMID:22926577)
UniProt
PMID:22926577
NCBI chr 9:57,850,870...57,855,607
Ensembl chr 9:57,850,922...57,855,257
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INA
internexin neuronal intermediate filament protein alpha
involved_in
ISO
(PMID:22926577)
UniProt
PMID:22926577
NCBI chr28:15,670,919...15,685,080
Ensembl chr28:15,670,999...15,683,380
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LDHA
lactate dehydrogenase A
involved_in
ISO
(PMID:22926577)
UniProt
PMID:22926577
NCBI chr21:40,829,844...40,840,947
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LOC100688796
ATP synthase F(0) complex subunit B1, mitochondrial
involved_in
ISO
(PMID:22926577)
UniProt
PMID:22926577
NCBI chr17:63,940,486...63,954,982
Ensembl chr 6:40,613,415...40,625,979 Ensembl chr 6:40,613,415...40,625,979
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LOC100855552
creatine kinase B-type
involved_in
ISO
(PMID:22926577)
UniProt
PMID:22926577
NCBI chr 8:71,284,104...71,287,379
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LOC403934
cell division cycle 42
involved_in
ISO
(PMID:22926577)
UniProt
PMID:22926577
NCBI chr 2:77,153,276...77,169,947
Ensembl chr 2:77,153,095...77,199,211
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LOC612644
cytochrome c oxidase subunit 6B1
involved_in
ISO
(PMID:22926577)
UniProt
PMID:22926577
NCBI chr 1:116,960,851...116,969,415
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MAG
myelin associated glycoprotein
involved_in
ISO
(PMID:22926577)
UniProt
PMID:22926577
NCBI chr 1:117,288,306...117,301,975
Ensembl chr 1:117,288,343...117,302,386
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MAOB
monoamine oxidase B
involved_in
ISO
(PMID:22926577)
UniProt
PMID:22926577
NCBI chr X:37,765,810...37,883,955
Ensembl chr X:37,765,813...37,883,955
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MAPKAP1
MAPK associated protein 1
involved_in
ISO
(PMID:22926577)
UniProt
PMID:22926577
NCBI chr 9:57,447,115...57,699,979
Ensembl chr 9:57,446,832...57,699,950
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MBP
myelin basic protein
involved_in
ISO
(PMID:22926577)
UniProt
PMID:22926577
NCBI chr 1:2,841,801...2,952,553
Ensembl chr 1:2,846,589...2,951,860
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NDRG2
NDRG family member 2
involved_in
ISO
(PMID:22926577)
UniProt
PMID:22926577
NCBI chr15:18,106,651...18,115,026
Ensembl chr15:18,106,654...18,113,970
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NDUFS3
NADH:ubiquinone oxidoreductase core subunit S3
involved_in
ISO
(PMID:22926577)
UniProt
PMID:22926577
NCBI chr18:42,069,402...42,075,843
Ensembl chr18:42,069,398...42,076,921
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PADI2
peptidyl arginine deiminase 2
involved_in
ISO
(PMID:22926577)
UniProt
PMID:22926577
NCBI chr 2:81,116,031...81,147,889
Ensembl chr 2:81,116,140...81,145,043
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PLP1
proteolipid protein 1
involved_in
ISO
(PMID:22926577)
UniProt
PMID:22926577
NCBI chr X:77,191,112...77,207,772
Ensembl chr X:77,191,150...77,205,964
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RAD1
RAD1 checkpoint DNA exonuclease
involved_in
ISO
(PMID:22926577)
UniProt
PMID:22926577
NCBI chr 4:73,372,391...73,393,148
Ensembl chr 4:73,385,566...73,452,033
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RHOA
ras homolog family member A
involved_in
ISO
(PMID:22926577)
UniProt
PMID:22926577
NCBI chr20:39,824,552...39,888,089
Ensembl chr20:39,824,575...39,887,215
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S100A1
S100 calcium binding protein A1
involved_in
ISO
(PMID:22926577)
UniProt
PMID:22926577
NCBI chr 7:43,428,819...43,432,637
Ensembl chr 7:43,428,820...43,433,459
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SEC16A
SEC16 homolog A, endoplasmic reticulum export factor
involved_in
ISO
(PMID:22926577)
UniProt
PMID:22926577
NCBI chr 9:49,027,190...49,060,858
Ensembl chr 9:49,031,669...49,060,848
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SIRT2
sirtuin 2
involved_in
ISO
(PMID:22926577)
UniProt
PMID:22926577
NCBI chr 1:114,224,922...114,235,041
Ensembl chr 1:114,224,900...114,234,583
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SUDS3
SDS3 homolog, SIN3A corepressor complex component
involved_in
ISO
(PMID:22926577)
UniProt
PMID:22926577
NCBI chr26:14,716,759...14,749,475
Ensembl chr26:14,716,562...15,019,622
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SYNGR3
synaptogyrin 3
involved_in
ISO
(PMID:22926577)
UniProt
PMID:22926577
NCBI chr 6:38,941,933...38,944,110
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SYPL2
synaptophysin like 2
involved_in
ISO
(PMID:22926577)
UniProt
PMID:22926577
NCBI chr 6:42,377,528...42,391,765
Ensembl chr 6:42,380,144...42,385,102
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TTBK1
tau tubulin kinase 1
involved_in
ISO
(PMID:22926577)
UniProt
PMID:22926577
NCBI chr12:11,738,466...11,774,663
Ensembl chr12:11,738,232...11,757,814
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UCHL1
ubiquitin C-terminal hydrolase L1
involved_in
ISO
(PMID:22926577)
UniProt
PMID:22926577
NCBI chr 3:71,396,694...71,430,395
Ensembl chr 3:71,370,822...71,411,350
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YWHAE
tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein epsilon
involved_in
ISO
(PMID:22926577)
UniProt
PMID:22926577
NCBI chr 9:45,506,830...45,562,081
Ensembl chr 9:45,507,282...45,562,086
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YWHAH
tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein eta
involved_in
ISO
(PMID:22926577)
UniProt
PMID:22926577
NCBI chr26:24,785,374...24,796,603
Ensembl chr26:24,785,368...24,795,778
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YWHAQ
tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta
involved_in
ISO
(PMID:22926577)
UniProt
PMID:22926577
NCBI chr17:6,660,504...6,697,954
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ZNF148
zinc finger protein 148
involved_in
ISO
(PMID:22926577)
UniProt
PMID:22926577
NCBI chr33:28,229,270...28,347,939
Ensembl chr33:28,233,728...28,348,154
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