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ONTOLOGY REPORT - ANNOTATIONS


Term:limbic system development
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Accession:GO:0021761 term browser browse the term
Definition:The progression of the limbic system over time from its initial formation until its mature state. The limbic system is a collection of structures in the brain involved in emotion, motivation and emotional aspects of memory.


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limbic system development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cntnap2 contactin associated protein 2 involved_in
acts_upstream_of_or_within
ISO (PMID:18179895) RGD PMID:18179895 NCBI chr 4:74,700,539...77,025,463 JBrowse link
G Tbx3 T-box transcription factor 3 acts_upstream_of_or_within ISO MGI:3710254 (MGI:3709665|PMID:17473172) RGD PMID:17473172 MGI:3709665 NCBI chr12:42,479,518...42,494,588
Ensembl chr12:42,480,560...42,492,526
JBrowse link
ammon gyrus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lrp8 LDL receptor related protein 8 involved_in ISO (MGI:3821675|PMID:18778775) RGD PMID:18778775 MGI:3821675 NCBI chr 5:127,404,348...127,476,636
Ensembl chr 5:127,404,450...127,476,641
JBrowse link
amygdala development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp1a2 ATPase Na+/K+ transporting subunit alpha 2 acts_upstream_of_or_within ISO (MGI:2664023|PMID:12805306) RGD PMID:12805306 MGI:2664023 NCBI chr13:90,651,682...90,676,629
Ensembl chr13:90,651,686...90,676,629
JBrowse link
G Esr2 estrogen receptor 2 IEP RGD PMID:22791648 RGD:8694158 NCBI chr 6:99,163,953...99,214,711
Ensembl chr 6:99,164,357...99,214,251
JBrowse link
G Nf1 neurofibromin 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1339975 (MGI:5620820|PMID:25242307)
Ensembl
RGD
PMID:25242307 GO_REF:0000107 MGI:5620820 NCBI chr10:66,732,460...66,928,706
Ensembl chr10:66,690,133...66,928,903
JBrowse link
G Nr2e1 nuclear receptor subfamily 2, group E, member 1 acts_upstream_of_or_within ISO MGI:2151350 (MGI:3527227|PMID:12527005) RGD PMID:12527005 MGI:3527227 NCBI chr20:47,286,843...47,306,318
Ensembl chr20:47,288,137...47,306,318
JBrowse link
G Pak1 p21 (RAC1) activated kinase 1 acts_upstream_of_or_within ISO MGI:97306 (MGI:5620820|PMID:25242307) RGD PMID:25242307 MGI:5620820 NCBI chr 1:162,768,156...162,883,356
Ensembl chr 1:162,768,156...162,883,355
JBrowse link
G Tbr1 T-box brain transcription factor 1 acts_upstream_of_or_within ISO MGI:2179766 (MGI:5560839|PMID:24441682) RGD PMID:24441682 MGI:5560839 NCBI chr 3:47,677,720...47,685,902
Ensembl chr 3:47,677,720...47,685,902
JBrowse link
G Uba6 ubiquitin-like modifier activating enzyme 6 acts_upstream_of_or_within ISO MGI:2176173|MGI:5509054 (MGI:5495570|PMID:23499007) RGD PMID:23499007 MGI:5495570 NCBI chr14:23,507,628...23,571,446
Ensembl chr14:23,507,628...23,571,446
JBrowse link
dentate gyrus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atat1 alpha tubulin acetyltransferase 1 acts_upstream_of_or_within ISO MGI:4453011 (MGI:5516166|PMID:23720746) RGD PMID:23720746 MGI:5516166 NCBI chr20:3,351,269...3,364,565
Ensembl chr20:3,351,303...3,364,565
JBrowse link
G Btg2 BTG anti-proliferation factor 2 acts_upstream_of_or_within ISO MGI:3525505 (MGI:4418391|PMID:20020054) RGD PMID:20020054 MGI:4418391 NCBI chr13:50,913,185...50,916,944
Ensembl chr13:50,913,180...50,916,982
JBrowse link
G Drd1 dopamine receptor D1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2181426|MGI:3707260 (MGI:3703826|PMID:17360497)
Ensembl
RGD
PMID:17360497 GO_REF:0000107 MGI:3703826 NCBI chr17:11,099,736...11,104,352
Ensembl chr17:11,101,306...11,103,541
JBrowse link
G Emx2 empty spiracles homeobox 2 acts_upstream_of_or_within ISO MGI:2148858 (MGI:2153372|PMID:10729342) RGD PMID:10729342 MGI:2153372 NCBI chr 1:280,633,938...280,640,946
Ensembl chr 1:280,633,938...280,640,946
JBrowse link
G Fezf2 Fez family zinc finger 2 acts_upstream_of_or_within ISO MGI:3046867 (MGI:3702790|PMID:16971467) RGD PMID:16971467 MGI:3702790 NCBI chr15:12,825,333...12,831,496
Ensembl chr15:12,827,707...12,831,496
JBrowse link
G Kif3a kinesin family member 3a acts_upstream_of_or_within ISO MGI:2179048|MGI:2386464 (MGI:3794243|PMID:18297065) RGD PMID:18297065 MGI:3794243 NCBI chr10:38,918,705...38,953,958
Ensembl chr10:38,918,748...38,952,785
JBrowse link
G Lef1 lymphoid enhancer binding factor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1933764 (MGI:1351293|PMID:10631168)
Ensembl
RGD
PMID:10631168 GO_REF:0000107 MGI:1351293 NCBI chr 2:236,232,115...236,345,061
Ensembl chr 2:236,233,239...236,345,056
JBrowse link
G Lmx1a LIM homeobox transcription factor 1 alpha acts_upstream_of_or_within ISO MGI:1888413 (MGI:49987|PMID:1638738) RGD PMID:1638738 MGI:49987 NCBI chr13:85,916,753...86,061,534
Ensembl chr13:85,918,252...86,061,176
JBrowse link
G Mdk midkine acts_upstream_of_or_within ISO (PMID:10096022) RGD PMID:10096022 NCBI chr 3:80,841,003...80,843,895
Ensembl chr 3:80,841,005...80,842,916
JBrowse link
G Mef2c myocyte enhancer factor 2C IEP RGD PMID:18949272 RGD:5131610 NCBI chr 2:11,658,534...11,822,788
Ensembl chr 2:11,658,568...11,822,787
JBrowse link
G Neurod1 neuronal differentiation 1 involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
MGI:106593 (MGI:1858353|PMID:10804213)
(MGI:1352314|PMID:10639171), (MGI:2159022|PMID:10398678)
UniProt
RGD
PMID:10398678 PMID:10639171 PMID:10804213 GO_REF:0000024 MGI:1352314 MGI:1858353 MGI:2159022 NCBI chr 3:66,414,314...66,417,617
Ensembl chr 3:66,414,308...66,417,741
JBrowse link
G Neurod6 neuronal differentiation 6 acts_upstream_of_or_within ISO MGI:1339708 (MGI:1858353|PMID:10804213) RGD PMID:10804213 MGI:1858353 NCBI chr 4:85,911,861...85,915,107
Ensembl chr 4:85,911,861...85,915,099
JBrowse link
G Nr2e1 nuclear receptor subfamily 2, group E, member 1 acts_upstream_of_or_within ISO MGI:2151350|MGI:2181426 (MGI:3527227|PMID:12527005), (MGI:3763461|PMID:17953618) RGD PMID:12527005 PMID:17953618 MGI:3527227 MGI:3763461 NCBI chr20:47,286,843...47,306,318
Ensembl chr20:47,288,137...47,306,318
JBrowse link
G Prox1 prospero homeobox 1 involved_in ISO (MGI:4849596|PMID:20808958) RGD PMID:20808958 MGI:4849596 NCBI chr13:108,382,536...108,444,107
Ensembl chr13:108,382,399...108,443,294
JBrowse link
G Pten phosphatase and tensin homolog involved_in ISO (MGI:3759727|PMID:17706614) RGD PMID:17706614 MGI:3759727 NCBI chr 1:251,421,814...251,487,634
Ensembl chr 1:251,421,596...251,487,832
JBrowse link
G Reln reelin IMP RGD PMID:15459104 RGD:2317799 NCBI chr 4:9,347,533...9,774,257
Ensembl chr 4:9,347,528...9,773,670
JBrowse link
G Sct secretin acts_upstream_of_or_within ISO MGI:3815315 (MGI:4939559|PMID:21159798) RGD PMID:21159798 MGI:4939559 NCBI chr 1:214,264,865...214,277,437
Ensembl chr 1:214,264,754...214,265,668
JBrowse link
G Smo smoothened, frizzled class receptor involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2176256|MGI:2179048 (MGI:3794243|PMID:18297065)
Ensembl
RGD
PMID:18297065 GO_REF:0000107 MGI:3794243 NCBI chr 4:57,019,941...57,041,779
Ensembl chr 4:57,019,941...57,042,770
JBrowse link
G Tmem108 transmembrane protein 108 involved_in ISO (MGI:5825380|PMID:28096412) RGD PMID:28096412 MGI:5825380 NCBI chr 8:111,968,568...112,265,623
Ensembl chr 8:111,970,288...111,984,572
JBrowse link
fibroblast growth factor receptor signaling pathway involved in orbitofrontal cortex development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgfr1 Fibroblast growth factor receptor 1 involved_in ISO (MGI:4452541|PMID:20410112) RGD PMID:20410112 MGI:4452541 NCBI chr16:71,265,390...71,319,046
Ensembl chr16:71,266,248...71,319,449
JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 involved_in ISO (MGI:4452541|PMID:20410112) RGD PMID:20410112 MGI:4452541 NCBI chr 1:200,590,951...200,696,946
Ensembl chr 1:200,590,953...200,696,928
JBrowse link
gonadotrophin-releasing hormone neuronal migration to the hypothalamus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ndnf neuron-derived neurotrophic factor involved_in ISO (MGI:6442643|PMID:31883645) RGD PMID:31883645 MGI:6442643 NCBI chr 4:96,528,830...96,565,780 JBrowse link
G Nrp1 neuropilin 1 involved_in ISO (MGI:4850173|PMID:21059704) RGD PMID:21059704 MGI:4850173 NCBI chr19:61,332,351...61,486,166
Ensembl chr19:61,332,351...61,485,858
JBrowse link
G Nrp2 neuropilin 2 involved_in ISO (MGI:4850173|PMID:21059704) RGD PMID:21059704 MGI:4850173 NCBI chr 9:69,496,875...69,609,802
Ensembl chr 9:69,497,121...69,612,087
JBrowse link
G Sema3a semaphorin 3A involved_in ISO (MGI:4850173|PMID:21059704) RGD PMID:21059704 MGI:4850173 NCBI chr 4:18,170,375...18,545,190
Ensembl chr 4:18,178,656...18,396,035
JBrowse link
hippocampus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvr1c activin A receptor type 1C IEP RGD PMID:8940033 RGD:631880 NCBI chr 3:44,272,859...44,342,501
Ensembl chr 3:44,270,653...44,342,355
JBrowse link
G Akap5 A-kinase anchoring protein 5 IEP RGD PMID:19535604 RGD:2313144 NCBI chr 6:99,356,509...99,361,909
Ensembl chr 6:99,356,509...99,361,909
JBrowse link
G Akr1c14 aldo-keto reductase family 1, member C14 IEP RGD PMID:21047951 RGD:4145527 NCBI chr17:69,806,095...69,827,125
Ensembl chr17:69,806,065...69,827,112
JBrowse link
G Alk ALK receptor tyrosine kinase acts_upstream_of_or_within ISO MGI:5700373 (MGI:5697626|PMID:17487225) RGD PMID:17487225 MGI:5697626 NCBI chr 6:22,696,415...23,203,791
Ensembl chr 6:22,696,397...23,203,775
JBrowse link
G Anxa3 annexin A3 IEP RGD PMID:18493952 RGD:2302825 NCBI chr14:14,371,921...14,426,503
Ensembl chr14:14,364,008...14,426,437
JBrowse link
G Atp2b4 ATPase plasma membrane Ca2+ transporting 4 IEP RGD PMID:16200642 RGD:6906893 NCBI chr13:50,091,644...50,153,808
Ensembl chr13:50,091,430...50,153,823
JBrowse link
G Bbs1 Bardet-Biedl syndrome 1 acts_upstream_of_or_within ISO MGI:3767672 (MGI:3767384|PMID:18032602) RGD PMID:18032602 MGI:3767384 NCBI chr 1:220,146,084...220,165,545
Ensembl chr 1:220,147,327...220,165,678
JBrowse link
G Bbs2 Bardet-Biedl syndrome 2 acts_upstream_of_or_within ISO MGI:3521669 (MGI:3767384|PMID:18032602) RGD PMID:18032602 MGI:3767384 NCBI chr19:11,385,921...11,421,523
Ensembl chr19:11,386,024...11,421,498
JBrowse link
G Bbs4 Bardet-Biedl syndrome 4 acts_upstream_of_or_within ISO MGI:3045473 (MGI:3767384|PMID:18032602), (MGI:5604561|PMID:24695551) RGD PMID:18032602 PMID:24695551 MGI:3767384 MGI:5604561 NCBI chr 8:64,115,005...64,154,432
Ensembl chr 8:64,121,392...64,154,396
JBrowse link
G Bcan brevican involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2388924 (MGI:2388543|PMID:12370289)
Ensembl
RGD
PMID:12370289 GO_REF:0000107 MGI:2388543 NCBI chr 2:187,359,674...187,373,133
Ensembl chr 2:187,359,677...187,372,657
JBrowse link
G Casp3 caspase 3 IEP RGD PMID:18459132 RGD:2293317 NCBI chr16:48,845,011...48,863,249
Ensembl chr16:48,845,012...48,863,204
JBrowse link
G Cdk5 cyclin-dependent kinase 5 acts_upstream_of_or_within ISO MGI:1861809 (MGI:2149271|PMID:11517264) RGD PMID:11517264 MGI:2149271 NCBI chr 4:7,282,945...7,287,427
Ensembl chr 4:7,282,948...7,288,383
JBrowse link
G Cdk5r1 cyclin-dependent kinase 5 regulatory subunit 1 acts_upstream_of_or_within ISO MGI:1330828 (MGI:2149271|PMID:11517264) RGD PMID:11517264 MGI:2149271 NCBI chr10:67,862,054...67,863,255
Ensembl chr10:67,862,054...67,863,255
JBrowse link
G Cdk5r2 cyclin-dependent kinase 5 regulatory subunit 2 acts_upstream_of_or_within ISO MGI:101764 (MGI:2149271|PMID:11517264) RGD PMID:11517264 MGI:2149271 NCBI chr 9:82,120,059...82,121,527
Ensembl chr 9:82,120,059...82,121,527
JBrowse link
G Cfl1 cofilin 1 IEP RGD PMID:27073215 RGD:11568695 NCBI chr 1:220,869,805...220,873,337
Ensembl chr 1:220,869,805...220,873,337
JBrowse link
G Crk CRK proto-oncogene, adaptor protein acts_upstream_of_or_within ISO MGI:104686 (MGI:3822695|PMID:19074029) RGD PMID:19074029 MGI:3822695 NCBI chr10:63,829,731...63,855,999
Ensembl chr10:63,829,807...63,852,780
JBrowse link
G Crkl CRK like proto-oncogene, adaptor protein acts_upstream_of_or_within ISO MGI:88508 (MGI:3822695|PMID:19074029) RGD PMID:19074029 MGI:3822695 NCBI chr11:87,338,606...87,356,644
Ensembl chr11:87,778,312...87,815,043
JBrowse link
G Cyp11a1 cytochrome P450, family 11, subfamily a, polypeptide 1 IEP RGD PMID:21047951 RGD:4145527 NCBI chr 8:62,798,317...62,809,848
Ensembl chr 8:62,779,875...62,809,893
JBrowse link
G Cyp17a1 cytochrome P450, family 17, subfamily a, polypeptide 1 IEP RGD PMID:21047951 RGD:4145527 NCBI chr 1:266,422,127...266,429,947
Ensembl chr 1:266,422,132...266,428,239
JBrowse link
G Cyp19a1 cytochrome P450, family 19, subfamily a, polypeptide 1 IEP RGD PMID:21047951 RGD:4145527 NCBI chr 8:58,744,849...58,772,408
Ensembl chr 8:58,744,849...58,772,408
JBrowse link
G Dab1 DAB adaptor protein 1 acts_upstream_of_or_within ISO MGI:3777252 (MGI:3810044|PMID:18477607) RGD PMID:18477607 MGI:3810044 NCBI chr 5:123,154,360...124,279,170
Ensembl chr 5:123,905,166...124,280,115
JBrowse link
G Dclk2 doublecortin-like kinase 2 acts_upstream_of_or_within ISO MGI:1277171 (MGI:3844387|PMID:19342486) RGD PMID:19342486 MGI:3844387 NCBI chr 2:186,116,624...186,245,937
Ensembl chr 2:186,116,624...186,245,771
JBrowse link
G Dcx doublecortin involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1918012|MGI:2387757 (MGI:3844387|PMID:19342486)
Ensembl
RGD
PMID:19342486 GO_REF:0000107 MGI:3844387 NCBI chr  X:115,098,675...115,175,515
Ensembl chr  X:115,098,675...115,175,299
JBrowse link
G Dlx1 distal-less homeobox 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:94902 (MGI:1928567|PMID:11163262)
Ensembl
RGD
PMID:11163262 GO_REF:0000107 MGI:1928567 NCBI chr 3:58,164,931...58,169,521
Ensembl chr 3:58,164,931...58,169,521
JBrowse link
G Dlx2 distal-less homeobox 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:94901 (MGI:1928567|PMID:11163262)
Ensembl
RGD
PMID:11163262 GO_REF:0000107 MGI:1928567 NCBI chr 3:58,180,088...58,181,971
Ensembl chr 3:58,180,088...58,181,971
JBrowse link
G Drd1 dopamine receptor D1 acts_upstream_of_or_within ISO MGI:2181426|MGI:3707260 (MGI:3703826|PMID:17360497) RGD PMID:17360497 MGI:3703826 NCBI chr17:11,099,736...11,104,352
Ensembl chr17:11,101,306...11,103,541
JBrowse link
G Eif2b2 eukaryotic translation initiation factor 2B subunit beta IEP RGD PMID:12850562 RGD:11041879 NCBI chr 6:109,044,830...109,051,254
Ensembl chr 6:109,043,880...109,051,253
JBrowse link
G Eif2b3 eukaryotic translation initiation factor 2B subunit gamma IEP RGD PMID:12850562 RGD:11041879 NCBI chr 5:135,882,946...135,949,276
Ensembl chr 5:135,882,967...135,949,818
JBrowse link
G Eif2b4 eukaryotic translation initiation factor 2B subunit delta IEP RGD PMID:12850562 RGD:11041879 NCBI chr 6:26,546,917...26,552,474
Ensembl chr 6:26,546,924...26,552,430
JBrowse link
G Eif2b5 eukaryotic translation initiation factor 2B subunit epsilon IEP RGD PMID:12850562 RGD:11041879 NCBI chr11:84,080,273...84,090,259
Ensembl chr11:84,080,273...84,090,259
JBrowse link
G Enpp1 ectonucleotide pyrophosphatase/phosphodiesterase 1 IEP RGD PMID:18565716 RGD:13204724 NCBI chr 1:21,748,201...21,813,205
Ensembl chr 1:21,748,261...21,813,371
JBrowse link
G Epha5 EPH receptor A5 involved_in ISS
ISO
IBA
GO_REF:0000024
(MGI:2384261|PMID:12124402)
PMID:21873635
UniProt
RGD
PMID:12124402, PMID:21873635 GO_REF:0000024 MGI:2384261, RGD:13792537 NCBI chr14:25,589,312...25,958,258
Ensembl chr14:25,589,762...25,958,227
JBrowse link
G Ezh1 enhancer of zeste 1 polycomb repressive complex 2 subunit IEP RGD PMID:23932971 RGD:9587811 NCBI chr10:89,104,026...89,139,978
Ensembl chr10:89,104,027...89,130,339
JBrowse link
G Ezh2 enhancer of zeste 2 polycomb repressive complex 2 subunit IEP RGD PMID:23932971 RGD:9587811 NCBI chr 4:77,284,404...77,347,011
Ensembl chr 4:77,284,404...77,347,011
JBrowse link
G Fez1 fasciculation and elongation protein zeta 1 IEP RGD PMID:14992819 RGD:13208825 NCBI chr 8:39,305,128...39,350,270
Ensembl chr 8:39,305,128...39,350,270
JBrowse link
G Fgf13 fibroblast growth factor 13 involved_in ISS
ISO
GO_REF:0000024
(MGI:5431268|PMID:22726441)
UniProt
RGD
PMID:22726441 GO_REF:0000024 MGI:5431268 NCBI chr  X:142,053,648...142,589,274
Ensembl chr  X:142,053,654...142,248,369
JBrowse link
G Gli3 GLI family zinc finger 3 acts_upstream_of_or_within ISO MGI:2684610|MGI:3798847 (MGI:5523775|PMID:22235033) RGD PMID:22235033 MGI:5523775 NCBI chr17:52,294,942...52,569,036
Ensembl chr17:52,294,942...52,569,036
JBrowse link
G Grin2a glutamate ionotropic receptor NMDA type subunit 2A IEP RGD PMID:19535712 RGD:2325978 NCBI chr10:5,707,806...6,123,568
Ensembl chr10:5,930,298...6,119,990
JBrowse link
G Grin2b glutamate ionotropic receptor NMDA type subunit 2B IEP RGD PMID:19535712 RGD:2325978 NCBI chr 4:169,541,620...170,000,216
Ensembl chr 4:169,560,387...169,999,873
JBrowse link
G Gsk3b glycogen synthase kinase 3 beta involved_in ISO (PMID:19581563) RGD PMID:19581563 NCBI chr11:65,060,884...65,208,842
Ensembl chr11:65,066,235...65,209,268
JBrowse link
G Hdac1 histone deacetylase 1 acts_upstream_of_or_within ISO MGI:1097691 (MGI:3844761|PMID:19380719) RGD PMID:19380719 MGI:3844761 NCBI chr 5:147,716,664...147,743,723
Ensembl chr 5:147,716,664...147,743,723
JBrowse link
G Hdac2 histone deacetylase 2 acts_upstream_of_or_within ISO MGI:108086 (MGI:3844761|PMID:19380719) RGD PMID:19380719 MGI:3844761 NCBI chr20:43,084,870...43,108,198
Ensembl chr20:43,084,870...43,108,198
JBrowse link
G Hnrnpk heterogeneous nuclear ribonucleoprotein K IEP RGD PMID:22102872 RGD:10002783 NCBI chr17:6,664,730...6,676,753
Ensembl chr17:6,665,659...6,676,654
JBrowse link
G Hsd17b3 hydroxysteroid (17-beta) dehydrogenase 3 IEP RGD PMID:21047951 RGD:4145527 NCBI chr17:1,579,319...1,610,745
Ensembl chr17:1,579,319...1,610,745
JBrowse link
G Hsd17b7 hydroxysteroid (17-beta) dehydrogenase 7 IEP RGD PMID:21047951 RGD:4145527 NCBI chr13:88,288,116...88,308,019
Ensembl chr13:88,288,046...88,307,988
JBrowse link
G Hsd3b1 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1 involved_in IEP
IBA
PMID:21873635 RGD
GO_Central
PMID:21047951, PMID:21873635 RGD:4145527, RGD:13792537
G Hsd3b2 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2 involved_in IEP
IBA
PMID:21873635 RGD
GO_Central
PMID:21047951, PMID:21873635 RGD:4145527, RGD:13792537 NCBI chr 2:200,712,895...200,722,429
Ensembl chr 2:202,341,422...202,350,929
JBrowse link
G Hsd3b3 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:200,756,557...200,762,492
Ensembl chr 2:200,585,748...200,762,492
JBrowse link
G Hsd3b5 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 5 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:200,615,910...200,633,317
Ensembl chr 2:200,584,986...200,692,335
JBrowse link
G Htr5a 5-hydroxytryptamine receptor 5A IEP RGD PMID:16572590 RGD:2316993 NCBI chr 4:199,916...209,599
Ensembl chr 4:199,916...209,599
JBrowse link
G Id4 inhibitor of DNA binding 4, HLH protein acts_upstream_of_or_within ISO MGI:3505549 (MGI:3487176|PMID:15469968) RGD PMID:15469968 MGI:3487176 NCBI chr17:16,692,557...16,695,126
Ensembl chr17:16,692,557...16,695,126
JBrowse link
G Igf1r insulin-like growth factor 1 receptor IEP RGD PMID:22042446 RGD:10403040 NCBI chr 1:128,924,921...129,213,816
Ensembl chr 1:128,924,966...129,206,516
JBrowse link
G Insr insulin receptor IEP RGD PMID:22042446 RGD:10403040 NCBI chr12:1,682,527...1,816,414
Ensembl chr12:1,680,957...1,816,414
JBrowse link
G Kcna1 potassium voltage-gated channel subfamily A member 1 involved_in ISO (MGI:5613474|PMID:17315199) RGD PMID:17315199 MGI:5613474 NCBI chr 4:159,190,781...159,192,526
Ensembl chr 4:159,190,804...159,192,526
JBrowse link
G Kdm6b lysine demethylase 6B IDA RGD PMID:23932971 RGD:9587811 NCBI chr10:56,000,494...56,009,582
Ensembl chr10:56,001,799...56,008,885
JBrowse link
G Kif14 kinesin family member 14 involved_in ISO (MGI:5485315|PMID:23308235) RGD PMID:23308235 MGI:5485315 NCBI chr13:53,350,073...53,421,992
Ensembl chr13:53,351,717...53,420,111
JBrowse link
G Kif5a kinesin family member 5A IEP RGD PMID:9349526 RGD:12792964 NCBI chr 7:70,515,832...70,552,897
Ensembl chr 7:70,513,343...70,556,827
JBrowse link
G Kif5b kinesin family member 5B IEP RGD PMID:9349526 RGD:12792964 NCBI chr17:54,181,416...54,219,048
Ensembl chr17:54,181,419...54,212,096
JBrowse link
G Kirrel3 kirre like nephrin family adhesion molecule 3 involved_in ISO (MGI:5705162|PMID:26575286) RGD PMID:26575286 MGI:5705162 NCBI chr 8:35,692,525...36,254,755
Ensembl chr 8:36,125,999...36,254,753
JBrowse link
G Lef1 lymphoid enhancer binding factor 1 acts_upstream_of_or_within ISO MGI:1933764 (MGI:1351293|PMID:10631168) RGD PMID:10631168 MGI:1351293 NCBI chr 2:236,232,115...236,345,061
Ensembl chr 2:236,233,239...236,345,056
JBrowse link
G Lhx5 LIM homeobox 5 acts_upstream_of_or_within ISO MGI:2152620 (MGI:1337234|PMID:10325223) RGD PMID:10325223 MGI:1337234 NCBI chr12:41,663,000...41,671,437
Ensembl chr12:41,663,000...41,671,437
JBrowse link
G Lmx1a LIM homeobox transcription factor 1 alpha acts_upstream_of_or_within ISO MGI:1888413 (MGI:49987|PMID:1638738) RGD PMID:1638738 MGI:49987 NCBI chr13:85,916,753...86,061,534
Ensembl chr13:85,918,252...86,061,176
JBrowse link
G Lrp8 LDL receptor related protein 8 acts_upstream_of_or_within ISO MGI:109520 (MGI:3769085|PMID:17330141) RGD PMID:17330141 MGI:3769085 NCBI chr 5:127,404,348...127,476,636
Ensembl chr 5:127,404,450...127,476,641
JBrowse link
G Mas1 MAS1 proto-oncogene, G protein-coupled receptor IEP RGD PMID:1521325 RGD:2316795 NCBI chr 1:48,076,761...48,108,218
Ensembl chr 1:48,077,033...48,108,216
JBrowse link
G Mdk midkine involved_in ISO (MGI:2178952|PMID:10096022) RGD PMID:10096022 MGI:2178952 NCBI chr 3:80,841,003...80,843,895
Ensembl chr 3:80,841,005...80,842,916
JBrowse link
G Mecp2 methyl CpG binding protein 2 IEP RGD PMID:14751287 RGD:12743658 NCBI chr  X:156,650,389...156,713,813
Ensembl chr  X:156,655,960...156,705,233
JBrowse link
G Mfsd2a major facilitator superfamily domain containing 2A involved_in ISO (MGI:5571501|PMID:24828044) RGD PMID:24828044 MGI:5571501 NCBI chr 5:140,642,865...140,657,759
Ensembl chr 5:140,642,885...140,657,745
JBrowse link
G Mkks MKKS centrosomal shuttling protein acts_upstream_of_or_within ISO MGI:3526444 (MGI:3767384|PMID:18032602) RGD PMID:18032602 MGI:3767384 NCBI chr 3:129,866,542...129,885,213
Ensembl chr 3:129,866,545...129,884,810
JBrowse link
G Ncoa1 nuclear receptor coactivator 1 IEP RGD PMID:22085911 RGD:5688137 NCBI chr 6:28,677,563...28,931,844
Ensembl chr 6:28,677,540...28,931,843
JBrowse link
G Nefh neurofilament heavy IEP RGD PMID:14620872 RGD:9743946 NCBI chr14:85,181,572...85,191,557
Ensembl chr14:85,181,572...85,191,557
JBrowse link
G Nefl neurofilament light IEP RGD PMID:14620872 RGD:9743946 NCBI chr15:44,799,378...44,803,251
Ensembl chr15:44,799,334...44,804,574
JBrowse link
G Nefm neurofilament medium IEP RGD PMID:14620872 RGD:9743946 NCBI chr15:44,855,307...44,860,604
Ensembl chr15:44,855,310...44,860,604
JBrowse link
G Nf2 neurofibromin 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:5502251|PMID:23863479)
Ensembl
RGD
PMID:23863479 GO_REF:0000107 MGI:5502251 NCBI chr14:84,996,905...85,088,547
Ensembl chr14:84,996,905...85,088,523
JBrowse link
G Nkx2-1 NK2 homeobox 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1857494 (MGI:1928567|PMID:11163262)
Ensembl
RGD
PMID:11163262 GO_REF:0000107 MGI:1928567 NCBI chr 6:77,418,096...77,423,383
Ensembl chr 6:77,418,096...77,421,286
JBrowse link
G Nme1 NME/NM23 nucleoside diphosphate kinase 1 IEP RGD PMID:18493952 RGD:2302825 NCBI chr10:81,657,152...81,666,542
Ensembl chr10:81,657,153...81,666,523
JBrowse link
G Nog noggin IEP RGD PMID:15171992 RGD:10416525 NCBI chr10:76,811,759...76,813,386
Ensembl chr10:76,811,759...76,813,386
JBrowse link
G Nr4a3 nuclear receptor subfamily 4, group A, member 3 acts_upstream_of_or_within ISO MGI:3037444 (MGI:3056852|PMID:15456880) RGD PMID:15456880 MGI:3056852 NCBI chr 5:63,781,801...63,822,890
Ensembl chr 5:63,781,801...63,821,637
JBrowse link
G Ogdh oxoglutarate dehydrogenase acts_upstream_of_or_within ISO (PMID:16901643) RGD PMID:16901643 NCBI chr14:86,414,924...86,481,903
Ensembl chr14:86,414,949...86,613,327
JBrowse link
G Pafah1b1 platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 acts_upstream_of_or_within ISO MGI:1340044|MGI:2384054 (MGI:2183347|PMID:10729324), (MGI:3769085|PMID:17330141) RGD PMID:10729324 PMID:17330141 MGI:2183347 MGI:3769085 NCBI chr10:61,456,144...61,577,412
Ensembl chr10:61,456,145...61,577,412
JBrowse link
G Pebp1 phosphatidylethanolamine binding protein 1 IEP RGD PMID:18493952 RGD:2302825 NCBI chr12:45,026,948...45,031,148
Ensembl chr12:45,026,886...45,031,145
JBrowse link
G Phlpp1 PH domain and leucine rich repeat protein phosphatase 1 IEP RGD PMID:20819118 RGD:8693633 NCBI chr13:26,145,989...26,394,505
Ensembl chr13:26,172,243...26,394,505
JBrowse link
G Phlpp2 PH domain and leucine rich repeat protein phosphatase 2 IEP RGD PMID:20819118 RGD:8693633 NCBI chr19:41,731,845...41,798,451
Ensembl chr19:41,731,646...41,798,383
JBrowse link
G Plxna3 plexin A3 acts_upstream_of_or_within ISO MGI:2386961 (MGI:2152659|PMID:11683995) RGD PMID:11683995 MGI:2152659 NCBI chr  X:156,363,400...156,379,433
Ensembl chr  X:156,363,405...156,379,189
JBrowse link
G Ppp1r9b protein phosphatase 1, regulatory subunit 9B IEP RGD PMID:21123436 RGD:10043818 NCBI chr10:82,800,704...82,816,735
Ensembl chr10:82,800,704...82,816,731
JBrowse link
G Ptprs protein tyrosine phosphatase, receptor type, S involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2158734 (MGI:3614607|PMID:15842738)
Ensembl
RGD
PMID:15842738 GO_REF:0000107 MGI:3614607 NCBI chr 9:10,585,360...10,646,205
Ensembl chr 9:10,603,813...10,645,939
JBrowse link
G Ptprz1 protein tyrosine phosphatase, receptor type Z1 IEP RGD PMID:10906718 RGD:9589828 NCBI chr 4:49,941,046...50,140,764
Ensembl chr 4:49,941,304...50,140,762
JBrowse link
G Ran RAN, member RAS oncogene family IEP RGD PMID:18493952 RGD:2302825 NCBI chr12:31,319,556...31,324,105
Ensembl chr12:31,320,624...31,323,810
JBrowse link
G Rara retinoic acid receptor, alpha IEP RGD PMID:18619947 RGD:8693612 NCBI chr10:86,838,819...86,884,224
Ensembl chr10:86,860,685...86,884,210
JBrowse link
G Reln reelin involved_in IEA
ISO
GO_REF:0000107
(MGI:3765383|PMID:17229826)
Ensembl
RGD
PMID:17229826 GO_REF:0000107 MGI:3765383 NCBI chr 4:9,347,533...9,774,257
Ensembl chr 4:9,347,528...9,773,670
JBrowse link
G Sct secretin involved_in ISS
ISO
GO_REF:0000024
(MGI:3814626|PMID:18534766)
UniProt
RGD
PMID:18534766 GO_REF:0000024 MGI:3814626 NCBI chr 1:214,264,865...214,277,437
Ensembl chr 1:214,264,754...214,265,668
JBrowse link
G Sema6b semaphorin 6B involved_in ISS
ISO
GO_REF:0000024
(MGI:4454564|PMID:20484647)
UniProt
RGD
PMID:20484647 GO_REF:0000024 MGI:4454564 NCBI chr 9:10,934,273...10,951,252
Ensembl chr 9:10,941,613...10,951,252
JBrowse link
G Slc17a6 solute carrier family 17 member 6 IEP RGD PMID:18502731 RGD:9999204 NCBI chr 1:106,980,463...107,038,717
Ensembl chr 1:106,998,623...107,038,704
JBrowse link
G Slc32a1 solute carrier family 32 member 1 IEP RGD PMID:18502731 RGD:9999204 NCBI chr 3:155,102,980...155,107,815
Ensembl chr 3:155,103,150...155,107,817
JBrowse link
G Srd5a1 steroid 5 alpha-reductase 1 IEP RGD PMID:8770891 RGD:4892048 NCBI chr 1:36,320,504...36,354,694
Ensembl chr 1:36,320,461...36,354,756
JBrowse link
G Srd5a2 steroid 5 alpha-reductase 2 IEP RGD PMID:21047951 RGD:4145527 NCBI chr 6:25,279,635...25,315,501
Ensembl chr 6:25,279,626...25,315,511
JBrowse link
G Srf serum response factor acts_upstream_of_or_within ISO MGI:2181426|MGI:2385464 (MGI:3578447|PMID:15837932) RGD PMID:15837932 MGI:3578447 NCBI chr 9:16,737,637...16,747,226
Ensembl chr 9:16,737,642...16,747,225
JBrowse link
G Tent2 terminal nucleotidyltransferase 2 IEP RGD PMID:24074826 RGD:9684936 NCBI chr 2:22,746,290...22,798,252
Ensembl chr 2:22,747,547...22,798,214
JBrowse link
G Tp73 tumor protein p73 acts_upstream_of_or_within ISO MGI:1859911 (MGI:1354064|PMID:10716451) RGD PMID:10716451 MGI:1354064 NCBI chr 5:171,355,876...171,415,354
Ensembl chr 5:171,355,876...171,415,354
JBrowse link
G Tsc1 TSC complex subunit 1 acts_upstream_of_or_within ISO MGI:2176055|MGI:2656240 (MGI:3712408|PMID:17522300) RGD PMID:17522300 MGI:3712408 NCBI chr 3:7,219,955...7,269,063
Ensembl chr 3:7,237,192...7,265,145
JBrowse link
G Tsku tsukushi, small leucine rich proteoglycan involved_in IEA
ISO
ISS
GO_REF:0000107
(MGI:6478862|PMID:31983064)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:31983064 GO_REF:0000024 GO_REF:0000107 MGI:6478862 NCBI chr 1:163,317,281...163,328,697
Ensembl chr 1:163,317,282...163,328,591
JBrowse link
G Uba6 ubiquitin-like modifier activating enzyme 6 acts_upstream_of_or_within ISO MGI:2176173|MGI:5509054 (MGI:5495570|PMID:23499007) RGD PMID:23499007 MGI:5495570 NCBI chr14:23,507,628...23,571,446
Ensembl chr14:23,507,628...23,571,446
JBrowse link
G Uqcrq ubiquinol-cytochrome c reductase, complex III subunit VII acts_upstream_of_or_within ISO (PMID:16901643) RGD PMID:16901643 NCBI chr10:38,779,132...38,782,489
Ensembl chr10:38,779,132...38,782,419
JBrowse link
G Usp9x ubiquitin specific peptidase 9, X-linked acts_upstream_of_or_within ISO MGI:5438072 (MGI:5532214|PMID:23861879) RGD PMID:23861879 MGI:5532214 NCBI chr  X:10,510,033...10,660,555
Ensembl chr  X:10,510,033...10,630,297
JBrowse link
G Wnt3a Wnt family member 3A acts_upstream_of_or_within ISO MGI:1857489 (MGI:1351292|PMID:10631167) RGD PMID:10631167 MGI:1351292 NCBI chr10:45,598,898...45,643,151
Ensembl chr10:45,598,912...45,638,035
JBrowse link
G Xrcc1 X-ray repair cross complementing 1 acts_upstream_of_or_within ISO MGI:3836442 (MGI:4359093|PMID:19633665) RGD PMID:19633665 MGI:4359093 NCBI chr 1:81,412,635...81,441,680
Ensembl chr 1:81,413,353...81,441,678
JBrowse link
G Xrn2 5'-3' exoribonuclease 2 IEP RGD PMID:23933240 RGD:9684963 NCBI chr 3:141,224,858...141,298,272
Ensembl chr 3:141,225,290...141,298,265
JBrowse link
G Ywhae tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon acts_upstream_of_or_within ISO MGI:2667341 (MGI:2665158|PMID:12796778) RGD PMID:12796778 MGI:2665158 NCBI chr10:63,884,338...63,921,709
Ensembl chr10:63,884,338...63,921,709
JBrowse link
G Zbtb18 zinc finger and BTB domain containing 18 acts_upstream_of_or_within ISO MGI:3851929 (MGI:3851676|PMID:19409883) RGD PMID:19409883 MGI:3851676 NCBI chr13:95,582,234...95,593,316
Ensembl chr13:95,589,668...95,591,236
JBrowse link
G Zeb2 zinc finger E-box binding homeobox 2 acts_upstream_of_or_within ISO MGI:2387499|MGI:2684610 (MGI:3718270|PMID:17644613) RGD PMID:17644613 MGI:3718270 NCBI chr 3:29,857,289...29,985,932
Ensembl chr 3:29,862,473...29,996,865
JBrowse link
hypothalamus cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hap1 huntingtin-associated protein 1 involved_in IEA
ISO
GO_REF:0000107
(MGI:5560429|PMID:24355921)
Ensembl
RGD
PMID:24355921 GO_REF:0000107 MGI:5560429 NCBI chr10:88,257,975...88,266,210
Ensembl chr10:88,257,976...88,266,210
JBrowse link
G Otp orthopedia homeobox acts_upstream_of_or_within ISO MGI:2180541 (MGI:1347696|PMID:10557207) RGD PMID:10557207 MGI:1347696 NCBI chr 2:24,546,393...24,554,953
Ensembl chr 2:24,546,536...24,554,683
JBrowse link
G Pou3f2 POU class 3 homeobox 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1857996 (MGI:77941|PMID:8543156)
Ensembl
RGD
PMID:8543156 GO_REF:0000107 MGI:77941 NCBI chr 5:36,677,452...36,683,356
Ensembl chr 5:36,681,528...36,683,356
JBrowse link
G Prop1 PROP paired-like homeobox 1 acts_upstream_of_or_within ISO MGI:1856842 (MGI:85929|PMID:9067988) RGD PMID:9067988 MGI:85929 NCBI chr10:36,449,920...36,452,381
Ensembl chr10:36,449,920...36,452,378
JBrowse link
hypothalamus cell migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxb1 forkhead box B1 involved_in ISS
ISO
GO_REF:0000024
(MGI:4887555|PMID:19046377)
UniProt
RGD
PMID:19046377 GO_REF:0000024 MGI:4887555 NCBI chr 8:75,992,751...75,995,371
Ensembl chr 8:75,992,755...75,995,371
JBrowse link
G Pitx2 paired-like homeodomain 2 acts_upstream_of_or_within ISO MGI:1857846 (MGI:3790896|PMID:18206388) RGD PMID:18206388 MGI:3790896 NCBI chr 2:233,602,732...233,621,059
Ensembl chr 2:233,602,732...233,621,129
JBrowse link
hypothalamus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bax BCL2 associated X, apoptosis regulator involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1857429 (MGI:3054131|PMID:15342910)
Ensembl
RGD
PMID:15342910 GO_REF:0000107 MGI:3054131 NCBI chr 1:101,451,801...101,457,207
Ensembl chr 1:101,451,802...101,457,207
JBrowse link
G Crh corticotropin releasing hormone IEP RGD PMID:20002962 RGD:5130950 NCBI chr 2:104,459,999...104,461,863
Ensembl chr 2:104,459,999...104,461,863
JBrowse link
G Crhr1 corticotropin releasing hormone receptor 1 IEP RGD PMID:20002962 RGD:5130950 NCBI chr10:92,191,473...92,233,662
Ensembl chr10:92,191,718...92,232,645
JBrowse link
G Crhr2 corticotropin releasing hormone receptor 2 IEP RGD PMID:20002962 RGD:5130950 NCBI chr 4:85,286,371...85,329,374
Ensembl chr 4:85,286,372...85,329,362
JBrowse link
G Cyp19a1 cytochrome P450, family 19, subfamily a, polypeptide 1 IEP RGD PMID:15804399 RGD:4891928 NCBI chr 8:58,744,849...58,772,408
Ensembl chr 8:58,744,849...58,772,408
JBrowse link
G Esr2 estrogen receptor 2 IEP RGD PMID:12960049 RGD:1582276 NCBI chr 6:99,163,953...99,214,711
Ensembl chr 6:99,164,357...99,214,251
JBrowse link
G Ets1 ETS proto-oncogene 1, transcription factor IEP RGD PMID:8946059 RGD:2313681 NCBI chr 8:33,756,634...33,879,625
Ensembl chr 8:33,816,386...33,879,625
JBrowse link
G Gsx1 GS homeobox 1 acts_upstream_of_or_within ISO MGI:2154448 (MGI:79250|PMID:8631293) RGD PMID:8631293 MGI:79250 NCBI chr12:9,605,873...9,607,168
Ensembl chr12:9,605,873...9,607,168
JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor IEP RGD PMID:23291449 RGD:7207858 NCBI chr 7:102,586,313...102,591,240
Ensembl chr 7:102,586,313...102,591,240
JBrowse link
G Ncoa1 nuclear receptor coactivator 1 IEP RGD PMID:12551846 RGD:5688241 NCBI chr 6:28,677,563...28,931,844
Ensembl chr 6:28,677,540...28,931,843
JBrowse link
G Nkx2-6 NK2 homeobox 6 acts_upstream_of_or_within ISO (PMID:9621431) RGD PMID:9621431 NCBI chr15:51,034,620...51,038,715
Ensembl chr15:51,034,620...51,038,704
JBrowse link
G Rab3gap1 RAB3 GTPase activating protein catalytic subunit 1 involved_in ISO
IEA
(PMID:20512159)
GO_REF:0000107
RGD
Ensembl
PMID:20512159 GO_REF:0000107 NCBI chr13:44,578,208...44,649,876
Ensembl chr13:44,615,553...44,648,620
JBrowse link
G Rax retina and anterior neural fold homeobox involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1856862 (MGI:54368|PMID:925203)
Ensembl
RGD
PMID:925203 GO_REF:0000107 MGI:54368 NCBI chr18:61,638,352...61,642,056
Ensembl chr18:61,638,352...61,642,056
JBrowse link
G Reln reelin IEP RGD PMID:10436054 RGD:634730 NCBI chr 4:9,347,533...9,774,257
Ensembl chr 4:9,347,528...9,773,670
JBrowse link
G Sox3 SRY-box transcription factor 3 involved_in ISO (MGI:3033563|PMID:14981518) RGD PMID:14981518 MGI:3033563 NCBI chr  X:144,035,162...144,037,364
Ensembl chr  X:144,035,883...144,037,294
JBrowse link
G Srd5a1 steroid 5 alpha-reductase 1 IEP RGD PMID:15804399, PMID:8770891 RGD:4891928, RGD:4892048 NCBI chr 1:36,320,504...36,354,694
Ensembl chr 1:36,320,461...36,354,756
JBrowse link
G Srd5a2 steroid 5 alpha-reductase 2 IEP RGD PMID:15804399 RGD:4891928 NCBI chr 6:25,279,635...25,315,501
Ensembl chr 6:25,279,626...25,315,511
JBrowse link
G Uqcrq ubiquinol-cytochrome c reductase, complex III subunit VII acts_upstream_of_or_within ISO (PMID:16901643) RGD PMID:16901643 NCBI chr10:38,779,132...38,782,489
Ensembl chr10:38,779,132...38,782,419
JBrowse link
hypothalamus gonadotrophin-releasing hormone neuron development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nhlh2 nescient helix loop helix 2 involved_in
acts_upstream_of_or_within_positive_effect
IEA
ISO
GO_REF:0000107
(MGI:5504302|PMID:23785158)
Ensembl
RGD
PMID:23785158 GO_REF:0000107 MGI:5504302 NCBI chr 2:204,427,577...204,432,946
Ensembl chr 2:204,427,608...204,432,946
JBrowse link
G Ubb ubiquitin B acts_upstream_of_or_within ISO MGI:3774112 (MGI:3776935|PMID:18299572) RGD PMID:18299572 MGI:3776935 NCBI chr10:48,880,231...48,881,896
Ensembl chr10:48,881,049...48,881,881
JBrowse link
mammillary axonal complex development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Zeb2 zinc finger E-box binding homeobox 2 acts_upstream_of_or_within ISO MGI:2387499|MGI:2668659 (MGI:5629993|PMID:25741725) RGD PMID:25741725 MGI:5629993 NCBI chr 3:29,857,289...29,985,932
Ensembl chr 3:29,862,473...29,996,865
JBrowse link
mammillary body development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxb1 forkhead box B1 involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
(MGI:3589689|PMID:15654859)
(PMID:11170346)
UniProt
RGD
PMID:11170346 PMID:15654859 GO_REF:0000024 MGI:3589689 NCBI chr 8:75,992,751...75,995,371
Ensembl chr 8:75,992,755...75,995,371
JBrowse link
mammillothalamic axonal tract development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxb1 forkhead box B1 involved_in ISS
ISO
GO_REF:0000024
(MGI:1352733|PMID:10662642), (MGI:1931655|PMID:11170346)
UniProt
RGD
PMID:10662642 PMID:11170346 GO_REF:0000024 MGI:1352733 MGI:1931655 NCBI chr 8:75,992,751...75,995,371
Ensembl chr 8:75,992,755...75,995,371
JBrowse link
nucleus accumbens development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh1a3 aldehyde dehydrogenase 1 family, member A3 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3512079 (MGI:3701419|PMID:17207476)
Ensembl
RGD
PMID:17207476 GO_REF:0000107 MGI:3701419 NCBI chr 1:127,302,920...127,337,828
Ensembl chr 1:127,301,128...127,337,882
JBrowse link
orbitofrontal cortex development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arpc5 actin related protein 2/3 complex, subunit 5 IEP RGD PMID:23459330 RGD:11049475 NCBI chr13:70,174,970...70,183,879
Ensembl chr13:70,174,936...70,183,879
JBrowse link
G Drd1 dopamine receptor D1 IEP RGD PMID:22015925 RGD:7248608 NCBI chr17:11,099,736...11,104,352
Ensembl chr17:11,101,306...11,103,541
JBrowse link
G Drd2 dopamine receptor D2 IEP RGD PMID:22015925 RGD:7248608 NCBI chr 8:53,678,777...53,743,643
Ensembl chr 8:53,678,777...53,743,642
JBrowse link
G Fgfr1 Fibroblast growth factor receptor 1 involved_in ISO (MGI:4452541|PMID:20410112) RGD PMID:20410112 MGI:4452541 NCBI chr16:71,265,390...71,319,046
Ensembl chr16:71,266,248...71,319,449
JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 involved_in ISO (MGI:4452541|PMID:20410112) RGD PMID:20410112 MGI:4452541 NCBI chr 1:200,590,951...200,696,946
Ensembl chr 1:200,590,953...200,696,928
JBrowse link
G Reln reelin IEP RGD PMID:20035841 RGD:2317761 NCBI chr 4:9,347,533...9,774,257
Ensembl chr 4:9,347,528...9,773,670
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19633
    multicellular organismal process 8912
      multicellular organism development 5740
        system development 5283
          limbic system development 157
            amygdala development 7
            cingulate gyrus development 0
            hippocampus development + 122
            hypothalamus development + 30
            mammillary body development + 2
            nucleus accumbens development 1
            orbitofrontal cortex development + 6
            parahippocampal gyrus development 0
Path 2
Term Annotations click to browse term
  biological_process 19633
    developmental process 6782
      anatomical structure development 6259
        multicellular organism development 5740
          system development 5283
            nervous system development 2717
              central nervous system development 1267
                brain development 971
                  forebrain development 509
                    limbic system development 157
                      amygdala development 7
                      cingulate gyrus development 0
                      hippocampus development + 122
                      hypothalamus development + 30
                      mammillary body development + 2
                      nucleus accumbens development 1
                      orbitofrontal cortex development + 6
                      parahippocampal gyrus development 0
paths to the root