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ONTOLOGY REPORT - ANNOTATIONS


Term:cerebellar granular layer morphogenesis
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Accession:GO:0021683 term browser browse the term
Definition:The process in which the anatomical structure of the cerebellar granular layer is generated and organized. The granular layer is the innermost layer of the cerebellar cortex. This layer contains densely packed small neurons, mostly granule cells. Some Golgi cells are found at the outer border. Granule neurons send parallel fibers to the upper molecular layer, where they synapse with Purkinje cell dendrites. Mossy fibers from the pontine nuclei in the white matter synapse with granule cell axons, Golgi cell axons and unipolar brush interneuron axons at cerebellar glomeruli in the granule cell layer.


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cerebellar granular layer morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SERPINE2 serpin family E member 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3709698|PMID:17409116) Ensembl
MGI
PMID:17409116 GO_REF:0000107 MGI:3709698 NCBI chr 2:223,975,045...224,039,286
Ensembl chr 2:223,975,045...224,039,318
JBrowse link
cerebellar granular layer structural organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G KIF14 kinesin family member 14 involved_in ISS UniProt GO_REF:0000024 NCBI chr 1:200,551,497...200,620,791
Ensembl chr 1:200,551,497...200,620,751
JBrowse link
cerebellar granule cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATP2B2 ATPase plasma membrane Ca2+ transporting 2 acts_upstream_of_or_within ISO (MGI:1275896|PMID:9668038) MGI PMID:9668038 MGI:1275896 NCBI chr 3:10,324,023...10,707,962
Ensembl chr 3:10,324,023...10,708,007
JBrowse link
G CBLN1 cerebellin 1 precursor involved_in ISS BHF-UCL GO_REF:0000024 NCBI chr16:49,277,917...49,281,838
Ensembl chr16:49,277,917...49,281,838
JBrowse link
G GRID2 glutamate ionotropic receptor delta type subunit 2 involved_in ISS BHF-UCL GO_REF:0000024 NCBI chr 4:92,303,622...93,810,415
Ensembl chr 4:92,303,966...93,810,157
JBrowse link
G KNDC1 kinase non-catalytic C-lobe domain containing 1 involved_in
acts_upstream_of_or_within
ISS
ISO
(MGI:3769586|PMID:17984326) UniProt
MGI
PMID:17984326 GO_REF:0000024 MGI:3769586 NCBI chr10:133,160,219...133,226,412
Ensembl chr10:133,160,219...133,226,412
JBrowse link
G MTPN myotrophin involved_in IEA
ISO
Ensembl
RGD
PMID:8144589 GO_REF:0000107 RGD:632797 NCBI chr 7:135,926,760...135,977,359
Ensembl chr 7:135,926,760...135,977,359
JBrowse link
G NFIX nuclear factor I X acts_upstream_of_or_within ISO (MGI:5436217|PMID:21800304) MGI PMID:21800304 MGI:5436217 NCBI chr19:12,995,475...13,098,796
Ensembl chr19:12,995,475...13,098,796
JBrowse link
G NRXN1 neurexin 1 involved_in ISS BHF-UCL GO_REF:0000024 NCBI chr 2:49,918,503...51,032,132
Ensembl chr 2:49,918,503...51,225,575
JBrowse link
G OPHN1 oligophrenin 1 involved_in IMP (PMID:27160703) ARUK-UCL PMID:27160703 NCBI chr  X:68,042,344...68,433,841
Ensembl chr  X:67,949,349...68,433,913
JBrowse link
G PROX1 prospero homeobox 1 involved_in ISS BHF-UCL GO_REF:0000024 NCBI chr 1:213,983,239...214,041,510
Ensembl chr 1:213,983,181...214,041,510
JBrowse link
G TOP2A DNA topoisomerase II alpha ISO RGD PMID:11170002 RGD:8693630 NCBI chr17:40,388,525...40,417,902
Ensembl chr17:40,388,525...40,417,896
JBrowse link
G ULK1 unc-51 like autophagy activating kinase 1 acts_upstream_of_or_within ISO (MGI:1351063|PMID:10624947) MGI PMID:10624947 MGI:1351063 NCBI chr12:131,894,622...131,923,150
Ensembl chr12:131,894,622...131,923,150
JBrowse link
G WNT7A Wnt family member 7A involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:1195230|PMID:9405095) Ensembl
MGI
PMID:9405095 GO_REF:0000107 MGI:1195230 NCBI chr 3:13,816,258...13,880,071
Ensembl chr 3:13,816,258...13,880,071
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 18536
    developmental process 7220
      anatomical structure morphogenesis 3051
        cerebellar granular layer morphogenesis 14
          cerebellar granular layer formation + 12
          cerebellar granular layer structural organization 1
Path 2
Term Annotations click to browse term
  biological_process 18536
    developmental process 7220
      anatomical structure development 6545
        multicellular organism development 5918
          system development 5591
            nervous system development 2896
              central nervous system development 1333
                brain development 1014
                  hindbrain development 224
                    metencephalon development 169
                      cerebellum development 155
                        cerebellum morphogenesis 58
                          cerebellar cortex morphogenesis 47
                            cerebellar granular layer morphogenesis 14
                              cerebellar granular layer formation + 12
                              cerebellar granular layer structural organization 1
paths to the root