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ONTOLOGY REPORT - ANNOTATIONS


Term:cranial nerve structural organization
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Accession:GO:0021604 term browser browse the term
Definition:The process that contributes to the act of creating the structural organization of the cranial nerves. This process pertains to the physical shaping of a rudimentary structure. The cranial nerves are composed of twelve pairs of nerves that emanate from the nervous tissue of the hindbrain. These nerves are sensory, motor, or mixed in nature, and provide the motor and general sensory innervation of the head, neck and viscera. They mediate vision, hearing, olfaction and taste and carry the parasympathetic innervation of the autonomic ganglia that control visceral functions.
Synonyms:exact_synonym: cranial nerve structural organisation


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facial nerve structural organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Egr2 early growth response 2 involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
MGI:96170 (MGI:1306866|PMID:9806922)
(MGI:1331140|PMID:10068633), (MGI:69122|PMID:7935840)
UniProt
RGD
PMID:7935840 PMID:9806922 PMID:10068633 GO_REF:0000024 MGI:1306866 MGI:1331140 MGI:69122 NCBI chr20:22,452,170...22,461,018
Ensembl chr20:22,454,463...22,459,025
JBrowse link
G Hoxa1 homeobox A1 acts_upstream_of_or_within ISO MGI:95296 (MGI:1306866|PMID:9806922) RGD PMID:9806922 MGI:1306866 NCBI chr 4:82,124,358...82,127,182
Ensembl chr 4:82,125,406...82,127,066
JBrowse link
G Hoxb1 homeo box B1 acts_upstream_of_or_within ISO MGI:1857824 (MGI:83677|PMID:8898234) RGD PMID:8898234 MGI:83677 NCBI chr10:84,214,358...84,215,812
Ensembl chr10:84,214,358...84,215,687
JBrowse link
G Hoxb2 homeobox B2 acts_upstream_of_or_within ISO MGI:2151772 (MGI:85074|PMID:9012503) RGD PMID:9012503 MGI:85074 NCBI chr10:84,200,859...84,203,065
Ensembl chr10:84,200,880...84,202,688
JBrowse link
G Nrp1 neuropilin 1 involved_in ISO (MGI:3788968|PMID:18356247), (MGI:3822054|PMID:18804103) RGD PMID:18356247 PMID:18804103 MGI:3788968 MGI:3822054 NCBI chr19:61,332,351...61,486,166
Ensembl chr19:61,332,351...61,485,858
JBrowse link
G Nrp2 neuropilin 2 involved_in ISO (MGI:3788968|PMID:18356247) RGD PMID:18356247 MGI:3788968 NCBI chr 9:69,496,875...69,609,802
Ensembl chr 9:69,497,121...69,612,087
JBrowse link
G Plxna3 plexin A3 involved_in ISO (MGI:3822054|PMID:18804103) RGD PMID:18804103 MGI:3822054 NCBI chr  X:156,363,400...156,379,433
Ensembl chr  X:156,363,405...156,379,189
JBrowse link
G Plxna4 plexin A4 involved_in ISO (MGI:3822054|PMID:18804103) RGD PMID:18804103 MGI:3822054 NCBI chr 4:59,439,489...59,883,637
Ensembl chr 4:59,445,767...59,809,321
JBrowse link
G Sema3a semaphorin 3A involved_in ISO (MGI:3822054|PMID:18804103) RGD PMID:18804103 MGI:3822054 NCBI chr 4:18,170,375...18,545,190
Ensembl chr 4:18,178,656...18,396,035
JBrowse link
G Sema3f semaphorin 3F involved_in ISO (MGI:3822054|PMID:18804103) RGD PMID:18804103 MGI:3822054 NCBI chr 8:116,439,996...116,469,915
Ensembl chr 8:116,437,696...116,469,915
JBrowse link
olfactory nerve structural organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dmd dystrophin acts_upstream_of_or_within ISO MGI:3531484 (MGI:3805594|PMID:18586242) RGD PMID:18586242 MGI:3805594 NCBI chr  X:51,149,358...53,519,271
Ensembl chr  X:51,286,737...53,519,259
JBrowse link
optic nerve structural organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kcna2 potassium voltage-gated channel subfamily A member 2 acts_upstream_of_or_within ISO MGI:3043422 (MGI:3042560|PMID:15102918) RGD PMID:15102918 MGI:3042560 NCBI chr 2:209,838,607...209,852,471
Ensembl chr 2:209,838,869...209,852,471
JBrowse link
G Pax2 paired box 2 involved_in ISS
ISO
GO_REF:0000024
(MGI:84247|PMID:8951055)
UniProt
RGD
PMID:8951055 GO_REF:0000024 MGI:84247 NCBI chr 1:264,493,579...264,585,073
Ensembl chr 1:264,504,591...264,583,329
JBrowse link
trigeminal nerve structural organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nrp1 neuropilin 1 involved_in ISO (MGI:3822054|PMID:18804103) RGD PMID:18804103 MGI:3822054 NCBI chr19:61,332,351...61,486,166
Ensembl chr19:61,332,351...61,485,858
JBrowse link
G Plxna3 plexin A3 involved_in ISO (MGI:3822054|PMID:18804103) RGD PMID:18804103 MGI:3822054 NCBI chr  X:156,363,400...156,379,433
Ensembl chr  X:156,363,405...156,379,189
JBrowse link
G Plxna4 plexin A4 involved_in ISO (MGI:3822054|PMID:18804103) RGD PMID:18804103 MGI:3822054 NCBI chr 4:59,439,489...59,883,637
Ensembl chr 4:59,445,767...59,809,321
JBrowse link
G Sema3a semaphorin 3A involved_in ISO (MGI:3822054|PMID:18804103) RGD PMID:18804103 MGI:3822054 NCBI chr 4:18,170,375...18,545,190
Ensembl chr 4:18,178,656...18,396,035
JBrowse link
G Sema3f semaphorin 3F involved_in ISO (MGI:3822054|PMID:18804103) RGD PMID:18804103 MGI:3822054 NCBI chr 8:116,439,996...116,469,915
Ensembl chr 8:116,437,696...116,469,915
JBrowse link
vestibulocochlear nerve structural organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nrp1 neuropilin 1 involved_in ISO (MGI:3788968|PMID:18356247) RGD PMID:18356247 MGI:3788968 NCBI chr19:61,332,351...61,486,166
Ensembl chr19:61,332,351...61,485,858
JBrowse link
G Nrp2 neuropilin 2 involved_in ISO (MGI:3788968|PMID:18356247) RGD PMID:18356247 MGI:3788968 NCBI chr 9:69,496,875...69,609,802
Ensembl chr 9:69,497,121...69,612,087
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19491
    developmental process 6766
      anatomical structure arrangement 21
        cranial nerve structural organization 13
          abducens nerve structural organization 0
          accessory nerve structural organization 0
          cranial ganglion structural organization + 0
          facial nerve structural organization 10
          glossopharyngeal nerve structural organization 0
          hypoglossal nerve structural organization 0
          oculomotor nerve structural organization 0
          olfactory nerve structural organization 1
          optic nerve structural organization 2
          trigeminal nerve structural organization + 5
          trochlear nerve structural organization 0
          vagus nerve structural organization 0
          vestibulocochlear nerve structural organization 2
Path 2
Term Annotations click to browse term
  biological_process 19491
    developmental process 6766
      anatomical structure development 6192
        multicellular organism development 5629
          system development 5301
            nervous system development 2728
              nerve development 93
                cranial nerve development 59
                  cranial nerve morphogenesis 30
                    cranial nerve structural organization 13
                      abducens nerve structural organization 0
                      accessory nerve structural organization 0
                      cranial ganglion structural organization + 0
                      facial nerve structural organization 10
                      glossopharyngeal nerve structural organization 0
                      hypoglossal nerve structural organization 0
                      oculomotor nerve structural organization 0
                      olfactory nerve structural organization 1
                      optic nerve structural organization 2
                      trigeminal nerve structural organization + 5
                      trochlear nerve structural organization 0
                      vagus nerve structural organization 0
                      vestibulocochlear nerve structural organization 2
paths to the root