Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   

ONTOLOGY REPORT - ANNOTATIONS


Term:rhombomere morphogenesis
go back to main search page
Accession:GO:0021593 term browser browse the term
Definition:The process in which the anatomical structure of the rhombomere is generated and organized. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates.



show annotations for term's descendants           Sort by:
 
rhombomere morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pax6 paired box 6 IMP RGD PMID:21501682 RGD:8552349 NCBI chr 3:92,128,772...92,157,022
Ensembl chr 3:92,135,637...92,157,014
JBrowse link
rhombomere 3 formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Egr2 early growth response 2 acts_upstream_of_or_within ISO MGI:1857507 (MGI:64171|PMID:7903221) RGD PMID:7903221 MGI:64171 NCBI chr20:21,051,270...21,056,322
Ensembl chr20:21,051,277...21,055,562
JBrowse link
rhombomere 3 morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hoxa2 homeobox A2 acts_upstream_of_or_within
involved_in
ISO
IEA
MGI:1857626 (MGI:1335668|PMID:10230789)
GO_REF:0000107
RGD
Ensembl
PMID:10230789 GO_REF:0000107 MGI:1335668 Ensembl chr 4:81,262,768...81,265,044 JBrowse link
rhombomere 3 structural organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Egr2 early growth response 2 involved_in ISS
ISO
GO_REF:0000024
(MGI:52248|PMID:8093858)
UniProt
RGD
PMID:8093858 GO_REF:0000024 MGI:52248 NCBI chr20:21,051,270...21,056,322
Ensembl chr20:21,051,277...21,055,562
JBrowse link
rhombomere 5 formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Egr2 early growth response 2 acts_upstream_of_or_within ISO MGI:1857507 (MGI:64171|PMID:7903221) RGD PMID:7903221 MGI:64171 NCBI chr20:21,051,270...21,056,322
Ensembl chr20:21,051,277...21,055,562
JBrowse link
rhombomere 5 structural organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Egr2 early growth response 2 involved_in ISS
ISO
GO_REF:0000024
(MGI:52248|PMID:8093858), (MGI:6393337|PMID:11823429)
UniProt
RGD
PMID:8093858 PMID:11823429 GO_REF:0000024 MGI:52248 MGI:6393337 NCBI chr20:21,051,270...21,056,322
Ensembl chr20:21,051,277...21,055,562
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19834
    developmental process 6965
      anatomical structure morphogenesis 2925
        rhombomere morphogenesis 3
          convergent extension involved in rhombomere morphogenesis + 0
          rhombomere 1 morphogenesis + 0
          rhombomere 2 morphogenesis + 0
          rhombomere 3 morphogenesis + 2
          rhombomere 4 morphogenesis + 0
          rhombomere 5 morphogenesis + 1
          rhombomere 6 morphogenesis + 0
          rhombomere 7 morphogenesis + 0
          rhombomere 8 morphogenesis + 0
          rhombomere formation + 1
          rhombomere structural organization + 1
Path 2
Term Annotations click to browse term
  biological_process 19834
    developmental process 6965
      anatomical structure development 6376
        multicellular organism development 5800
          system development 5439
            nervous system development 2753
              central nervous system development 1284
                brain development 986
                  hindbrain development 222
                    rhombomere development 9
                      rhombomere morphogenesis 3
                        convergent extension involved in rhombomere morphogenesis + 0
                        rhombomere 1 morphogenesis + 0
                        rhombomere 2 morphogenesis + 0
                        rhombomere 3 morphogenesis + 2
                        rhombomere 4 morphogenesis + 0
                        rhombomere 5 morphogenesis + 1
                        rhombomere 6 morphogenesis + 0
                        rhombomere 7 morphogenesis + 0
                        rhombomere 8 morphogenesis + 0
                        rhombomere formation + 1
                        rhombomere structural organization + 1
paths to the root