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ONTOLOGY REPORT - ANNOTATIONS

Term:rhombomere morphogenesis
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Accession:GO:0021593 term browser browse the term
Definition:The process in which the anatomical structure of the rhombomere is generated and organized. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates.


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rhombomere morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pax6 paired box 6 IMP RGD PMID:21501682 RGD:8552349 NCBI chr 3:112,590,034...112,611,771
Ensembl chr 3:92,135,637...92,157,014 		JBrowse link
rhombomere 3 formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Egr2 early growth response 2 acts_upstream_of_or_within ISO MGI:1857507 (PMID:7903221) RGD PMID:7903221 NCBI chr20:21,050,149...21,055,201
Ensembl chr20:21,051,277...21,055,562 		JBrowse link
rhombomere 3 morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hoxa2 homeobox A2 acts_upstream_of_or_within ISO
IEA		 MGI:1857626 (PMID:10230789)
GO_REF:0000107		 RGD
Ensembl		 PMID:10230789 GO_REF:0000107 NCBI chr 4:81,262,668...81,266,970
Ensembl chr 4:81,262,768...81,265,044 		JBrowse link
rhombomere 3 structural organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Egr2 early growth response 2 involved_in ISS
ISO		 GO_REF:0000024
(PMID:8093858)		 UniProt
RGD		 PMID:8093858 GO_REF:0000024 NCBI chr20:21,050,149...21,055,201
Ensembl chr20:21,051,277...21,055,562 		JBrowse link
rhombomere 5 formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Egr2 early growth response 2 acts_upstream_of_or_within ISO MGI:1857507 (PMID:7903221) RGD PMID:7903221 NCBI chr20:21,050,149...21,055,201
Ensembl chr20:21,051,277...21,055,562 		JBrowse link
rhombomere 5 structural organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Egr2 early growth response 2 involved_in ISS
ISO		 GO_REF:0000024
(PMID:11823429), (PMID:8093858)		 UniProt
RGD		 PMID:8093858 PMID:11823429 GO_REF:0000024 NCBI chr20:21,050,149...21,055,201
Ensembl chr20:21,051,277...21,055,562 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20558
    developmental process 7149
      anatomical structure morphogenesis 3017
        rhombomere morphogenesis 3
          convergent extension involved in rhombomere morphogenesis + 0
          rhombomere 1 morphogenesis + 0
          rhombomere 2 morphogenesis + 0
          rhombomere 3 morphogenesis + 2
          rhombomere 4 morphogenesis + 0
          rhombomere 5 morphogenesis + 1
          rhombomere 6 morphogenesis + 0
          rhombomere 7 morphogenesis + 0
          rhombomere 8 morphogenesis + 0
          rhombomere formation + 1
          rhombomere structural organization + 1
Path 2
Term Annotations click to browse term
  biological_process 20558
    developmental process 7149
      anatomical structure development 6646
        multicellular organism development 5353
          system development 4635
            nervous system development 2872
              central nervous system development 1232
                brain development 907
                  hindbrain development 228
                    rhombomere development 9
                      rhombomere morphogenesis 3
                        convergent extension involved in rhombomere morphogenesis + 0
                        rhombomere 1 morphogenesis + 0
                        rhombomere 2 morphogenesis + 0
                        rhombomere 3 morphogenesis + 2
                        rhombomere 4 morphogenesis + 0
                        rhombomere 5 morphogenesis + 1
                        rhombomere 6 morphogenesis + 0
                        rhombomere 7 morphogenesis + 0
                        rhombomere 8 morphogenesis + 0
                        rhombomere formation + 1
                        rhombomere structural organization + 1
paths to the root