ONTOLOGY REPORT - ANNOTATIONS
Term: dentate gyrus development
Accession: GO:0021542
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Definition: The process whose specific outcome is the progression of the dentate gyrus over time, from its formation to the mature structure. The dentate gyrus is one of two interlocking gyri of the hippocampus. It contains granule cells, which project to the pyramidal cells and interneurons of the CA3 region of the ammon gyrus.
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Atat1
alpha tubulin acetyltransferase 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:4453011 (PMID:23720746)
Ensembl RGD
PMID:23720746
GO_REF:0000107
NCBI chr20:2,844,595...2,857,809
Ensembl chr20:2,844,616...2,861,964
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Bloc1s6
biogenesis of lysosomal organelles complex 1 subunit 6
acts_upstream_of_or_within
ISO
MGI:1856982 (PMID:30498428)
RGD
PMID:30498428
NCBI chr 3:109,816,397...109,826,528
Ensembl chr 3:109,816,366...109,828,308
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Btg2
BTG anti-proliferation factor 2
acts_upstream_of_or_within
ISO
MGI:3525505 (PMID:20020054)
RGD
PMID:20020054
NCBI chr13:45,531,881...45,535,642
Ensembl chr13:45,531,925...45,535,628
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Csf1r
colony stimulating factor 1 receptor
IMP
RGD
PMID:33450391
RGD:126781687
NCBI chr18:54,546,673...54,590,418
Ensembl chr18:54,546,659...54,590,415
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Drd1
dopamine receptor D1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2181426|MGI:3707260 (PMID:17360497)
Ensembl RGD
PMID:17360497
GO_REF:0000107
NCBI chr17:10,540,440...10,544,971
Ensembl chr17:10,540,558...10,545,002
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Emx2
empty spiracles homeobox 2
acts_upstream_of_or_within
ISO
MGI:2148858 (PMID:10729342)
RGD
PMID:10729342
NCBI chr 1:258,626,584...258,633,594
Ensembl chr 1:258,626,584...258,633,594
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Fezf2
Fez family zinc finger 2
acts_upstream_of_or_within
ISO
MGI:3046867 (PMID:16971467)
RGD
PMID:16971467
NCBI chr15:12,768,614...12,777,554
Ensembl chr15:12,773,762...12,777,554
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Fxr1
FMR1 autosomal homolog 1
involved_in
ISS ISO IEA
GO_REF:0000024 (PMID:28204491) GO_REF:0000107
UniProt RGD Ensembl
PMID:28204491
GO_REF:0000024 GO_REF:0000107
NCBI chr 2:116,884,167...116,937,590
Ensembl chr 2:116,884,248...116,937,590
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Fxr1-ps1
FMR1 autosomal homolog 1, pseudogene 1
involved_in
ISS
GO_REF:0000024
UniProt
GO_REF:0000024
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Fxr2
FMR1 autosomal homolog 2
involved_in
ISO
(PMID:21658585)
RGD
PMID:21658585
NCBI chr10:54,350,577...54,370,964
Ensembl chr10:54,350,131...54,370,964
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Kcnq2
potassium voltage-gated channel subfamily Q member 2
acts_upstream_of_or_within
ISO
MGI:98248 (PMID:16464983)
RGD
PMID:16464983
NCBI chr 3:168,194,776...168,253,831
Ensembl chr 3:168,195,357...168,275,071
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Kif3a
kinesin family member 3a
acts_upstream_of_or_within
ISO
MGI:2179048|MGI:2386464 (PMID:18297065)
RGD
PMID:18297065
NCBI chr10:37,725,930...37,761,183
Ensembl chr10:37,725,970...37,759,191
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Large1
LARGE xylosyl- and glucuronyltransferase 1
acts_upstream_of_or_within
ISO
MGI:1856965 (PMID:21970971)
RGD
PMID:21970971
NCBI chr19:11,603,129...12,048,930
Ensembl chr19:11,603,129...12,048,930
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Lef1
lymphoid enhancer binding factor 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1933764 (PMID:10631168)
Ensembl RGD
PMID:10631168
GO_REF:0000107
NCBI chr 2:219,666,549...219,779,815
Ensembl chr 2:219,666,592...219,779,794
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Lmx1a
LIM homeobox transcription factor 1 alpha
acts_upstream_of_or_within
ISO
MGI:1888413 (PMID:1638738)
RGD
PMID:1638738
NCBI chr13:79,834,614...79,978,253
Ensembl chr13:79,835,019...79,978,253
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Mdk
midkine
involved_in
IEA ISO
GO_REF:0000107 (PMID:10096022)
Ensembl RGD
PMID:10096022
GO_REF:0000107
NCBI chr 3:77,901,134...77,903,997
Ensembl chr 3:77,901,158...77,903,130
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Mef2c
myocyte enhancer factor 2C
IEP
RGD
PMID:18949272
RGD:5131610
NCBI chr 2:13,973,299...14,136,065
Ensembl chr 2:13,993,438...14,132,880
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Neurod1
neuronal differentiation 1
involved_in acts_upstream_of_or_within
ISS ISO
GO_REF:0000024 (PMID:10398678), (PMID:10639171) MGI:106593 (PMID:10804213)
UniProt RGD
PMID:10398678 PMID:10639171 PMID:10804213
GO_REF:0000024
NCBI chr 3:64,359,554...64,363,526
Ensembl chr 3:64,359,395...64,363,649
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Neurod6
neuronal differentiation 6
acts_upstream_of_or_within
ISO
MGI:1339708 (PMID:10804213)
RGD
PMID:10804213
NCBI chr 4:84,846,659...84,849,905
Ensembl chr 4:84,846,231...84,849,999
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Nr2e1
nuclear receptor subfamily 2, group E, member 1
acts_upstream_of_or_within
ISO
MGI:2151350|MGI:2181426 (PMID:12527005), (PMID:17953618)
RGD
PMID:12527005 PMID:17953618
NCBI chr20:46,050,134...46,071,257
Ensembl chr20:46,050,414...46,073,949
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Pianp
PILR alpha associated neural protein
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:31511635) GO_REF:0000107
RGD Ensembl
PMID:31511635
GO_REF:0000107
NCBI chr 4:157,796,425...157,804,842
Ensembl chr 4:157,798,808...157,804,842
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Pomgnt1
protein O-linked mannose N-acetylglucosaminyltransferase 1 (beta 1,2-)
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:3623521 (PMID:21970971)
Ensembl RGD
PMID:21970971
GO_REF:0000107
NCBI chr 5:129,634,274...129,644,150
Ensembl chr 5:129,634,294...129,644,149
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Pomt2
protein-O-mannosyltransferase 2
acts_upstream_of_or_within
ISO
MGI:5302103 (PMID:21970971)
RGD
PMID:21970971
NCBI chr 6:106,755,462...106,794,849
Ensembl chr 6:106,755,462...106,794,849
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Prox1
prospero homeobox 1
involved_in
ISO
(PMID:20808958)
RGD
PMID:20808958
NCBI chr13:101,669,184...101,719,804
Ensembl chr13:101,669,184...101,711,183
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Pten
phosphatase and tensin homolog
involved_in
ISO
(PMID:17706614)
RGD
PMID:17706614
NCBI chr 1:230,630,443...230,697,070
Ensembl chr 1:230,630,338...230,696,838
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Reln
reelin
IMP
RGD
PMID:15459104
RGD:2317799
NCBI chr 4:12,736,177...13,162,956
Ensembl chr 4:12,736,130...13,162,211
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Scn2a
sodium voltage-gated channel alpha subunit 2
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1309503 (PMID:16464983)
Ensembl RGD
PMID:16464983
GO_REF:0000107
NCBI chr 3:50,302,781...50,437,504
Ensembl chr 3:50,302,877...50,437,214
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Sct
secretin
acts_upstream_of_or_within
ISO
MGI:3815315 (PMID:21159798)
RGD
PMID:21159798
NCBI chr 1:196,382,857...196,383,668
Ensembl chr 1:196,382,856...196,383,658
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Smo
smoothened, frizzled class receptor
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2176256|MGI:2179048 (PMID:18297065)
Ensembl RGD
PMID:18297065
GO_REF:0000107
NCBI chr 4:58,343,626...58,373,823
Ensembl chr 4:58,343,529...58,373,829
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Tmem108
transmembrane protein 108
involved_in
ISO
(PMID:28096412)
RGD
PMID:28096412
NCBI chr 8:104,066,081...104,360,172
Ensembl chr 8:104,066,078...104,360,094
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Tuba1a
tubulin, alpha 1A
involved_in
ISO
MGI:3617352 (PMID:21041996)
RGD
PMID:21041996
NCBI chr 7:130,113,214...130,116,880
Ensembl chr 7:130,081,032...130,196,186
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Vps13b
vacuolar protein sorting 13 homolog B
acts_upstream_of_or_within
ISO
(PMID:37573958)
RGD
PMID:37573958
NCBI chr 7:66,557,862...67,128,429
Ensembl chr 7:66,558,471...67,128,429
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