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ONTOLOGY REPORT - ANNOTATIONS


Term:spinal cord association neuron differentiation
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Accession:GO:0021527 term browser browse the term
Definition:The process in which neuroepithelial cells in the neural tube acquire specialized structural and/or functional features of association neurons. Association neurons are cells located in the dorsal portion of the spinal cord that integrate sensory input. Differentiation includes the processes involved in commitment of a cell to a specific fate.
Synonyms:exact_synonym: spinal cord dorsal interneuron differentiation


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spinal cord association neuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASCL1 achaete-scute family bHLH transcription factor 1 acts_upstream_of_or_within ISO (MGI:3639800|PMID:16715081) MGI PMID:16715081 MGI:3639800 NCBI chr 5:81,357,431...81,360,335 JBrowse link
G GDF7 growth differentiation factor 7 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:1353705|PMID:10693795) Ensembl
MGI
PMID:10693795 GO_REF:0000107 MGI:1353705 NCBI chr 3:117,586,188...117,592,541
Ensembl chr 3:117,588,431...117,592,466
JBrowse link
G GSX1 GS homeobox 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3639800|PMID:16715081) Ensembl
MGI
PMID:16715081 GO_REF:0000107 MGI:3639800 NCBI chr11:5,194,872...5,197,275
Ensembl chr11:5,194,708...5,196,106
JBrowse link
G GSX2 GS homeobox 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3639800|PMID:16715081) Ensembl
MGI
PMID:16715081 GO_REF:0000107 MGI:3639800 NCBI chr 8:40,880,093...40,883,928
Ensembl chr 8:40,881,751...40,883,371
JBrowse link
G LHX1 LIM homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:38,450,708...38,457,583
Ensembl chr12:38,450,708...38,456,139
JBrowse link
G LHX3 LIM homeobox 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3840011|PMID:19323994) Ensembl
MGI
PMID:19323994 GO_REF:0000107 MGI:3840011
G LHX5 LIM homeobox 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:38,446,781...38,456,460
Ensembl chr14:38,446,730...38,457,177
JBrowse link
G LMO4 LIM domain only 4 acts_upstream_of_or_within ISO (MGI:3840011|PMID:19323994) MGI PMID:19323994 MGI:3840011 NCBI chr 4:128,894,113...128,910,648 JBrowse link
G MDGA1 MAM domain containing glycosylphosphatidylinositol anchor 1 involved_in ISO PMID:15019943 HGNC-UCL PMID:15019943 RGD:8554528 NCBI chr 7:33,205,736...33,269,213
Ensembl chr 7:33,210,157...33,269,130
JBrowse link
G PAX3 paired box 3 acts_upstream_of_or_within ISO (MGI:1321412|PMID:9858722) MGI PMID:9858722 MGI:1321412 NCBI chr15:124,093,803...124,193,041
Ensembl chr15:124,095,224...124,193,011
JBrowse link
G PAX7 paired box 7 acts_upstream_of_or_within ISO (MGI:1321412|PMID:9858722) MGI PMID:9858722 MGI:1321412 NCBI chr 6:77,160,827...77,268,626
Ensembl chr 6:77,161,097...77,267,415
JBrowse link
G TAL1 TAL bHLH transcription factor 1, erythroid differentiation factor involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3840011|PMID:19323994) Ensembl
MGI
PMID:19323994 GO_REF:0000107 MGI:3840011 NCBI chr 6:164,282,242...164,297,636
Ensembl chr 6:164,281,737...164,297,637
JBrowse link
G WNT1 Wnt family member 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2176385|PMID:11877374) Ensembl
MGI
PMID:11877374 GO_REF:0000107 MGI:2176385 NCBI chr 5:15,010,607...15,015,007
Ensembl chr 5:15,010,985...15,014,079
JBrowse link
G WNT3A Wnt family member 3A involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2176385|PMID:11877374) Ensembl
MGI
PMID:11877374 GO_REF:0000107 MGI:2176385 NCBI chr 2:51,153,978...51,203,678
Ensembl chr 2:51,154,086...51,202,176
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 16579
    developmental process 6309
      anatomical structure development 5828
        dorsal spinal cord development 21
          spinal cord association neuron differentiation 14
            negative regulation of spinal cord association neuron differentiation 0
            positive regulation of spinal cord association neuron differentiation + 0
            regulation of spinal cord association neuron differentiation + 0
            spinal cord association neuron specification 0
Path 2
Term Annotations click to browse term
  biological_process 16579
    developmental process 6309
      anatomical structure development 5828
        multicellular organism development 5301
          system development 4992
            nervous system development 2604
              neurogenesis 1884
                generation of neurons 1735
                  neuron differentiation 1572
                    central nervous system neuron differentiation 214
                      spinal cord association neuron differentiation 14
                        negative regulation of spinal cord association neuron differentiation 0
                        positive regulation of spinal cord association neuron differentiation + 0
                        regulation of spinal cord association neuron differentiation + 0
                        spinal cord association neuron specification 0
paths to the root