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ONTOLOGY REPORT - ANNOTATIONS


Term:spinal cord association neuron differentiation
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Accession:GO:0021527 term browser browse the term
Definition:The process in which neuroepithelial cells in the neural tube acquire specialized structural and/or functional features of association neurons. Association neurons are cells located in the dorsal portion of the spinal cord that integrate sensory input. Differentiation includes the processes involved in commitment of a cell to a specific fate.
Synonyms:exact_synonym: spinal cord dorsal interneuron differentiation



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spinal cord association neuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ascl1 achaete-scute family bHLH transcription factor 1 acts_upstream_of_or_within ISO MGI:1857470 (MGI:3639800|PMID:16715081) RGD PMID:16715081 MGI:3639800 NCBI chr 7:21,904,153...21,906,003
Ensembl chr 7:21,903,126...21,905,993
JBrowse link
G Gdf7 growth differentiation factor 7 acts_upstream_of_or_within ISO MGI:2386906 (MGI:1353705|PMID:10693795) RGD PMID:10693795 MGI:1353705 NCBI chr 6:31,171,495...31,182,447
Ensembl chr 6:31,178,119...31,182,447
JBrowse link
G Gsx1 GS homeobox 1 acts_upstream_of_or_within ISO MGI:95843 (MGI:3639800|PMID:16715081) RGD PMID:16715081 MGI:3639800 NCBI chr12:7,881,460...7,882,753
Ensembl chr12:7,881,460...7,882,753
JBrowse link
G Gsx2 GS homeobox 2 acts_upstream_of_or_within ISO MGI:95842 (MGI:3639800|PMID:16715081) RGD PMID:16715081 MGI:3639800 NCBI chr14:33,123,799...33,126,151
Ensembl chr14:33,124,381...33,126,105
JBrowse link
G Lhx1 LIM homeobox 1 involved_in ISS
ISO
GO_REF:0000024
UniProtKB:P61375 (MGI:3695495|PMID:17166926)
UniProt
RGD
PMID:17166926 GO_REF:0000024 MGI:3695495 NCBI chr10:69,396,829...69,403,617
Ensembl chr10:69,396,829...69,403,617
JBrowse link
G Lhx3 LIM homeobox 3 acts_upstream_of_or_within ISO (MGI:3840011|PMID:19323994) RGD PMID:19323994 MGI:3840011 NCBI chr 3:9,026,432...9,035,122
Ensembl chr 3:9,027,425...9,034,480
JBrowse link
G Lhx5 LIM homeobox 5 involved_in ISO UniProtKB:P63006 (MGI:3695495|PMID:17166926) RGD PMID:17166926 MGI:3695495 NCBI chr12:36,126,186...36,134,625
Ensembl chr12:36,126,186...36,134,625
JBrowse link
G Lmo4 LIM domain only 4 acts_upstream_of_or_within ISO MGI:98480 (MGI:3840011|PMID:19323994) RGD PMID:19323994 MGI:3840011 NCBI chr 2:233,264,180...233,280,881
Ensembl chr 2:233,264,182...233,280,880
JBrowse link
G Mdga1 MAM domain containing glycosylphosphatidylinositol anchor 1 involved_in IEP PMID:15019943 HGNC-UCL PMID:15019943 RGD:8554528 NCBI chr20:7,900,327...7,963,471
Ensembl chr20:7,904,358...7,963,471
JBrowse link
G Pax3 paired box 3 acts_upstream_of_or_within ISO MGI:97491 (MGI:1321412|PMID:9858722) RGD PMID:9858722 MGI:1321412 NCBI chr 9:79,567,455...79,664,042
Ensembl chr 9:79,568,634...79,664,042
JBrowse link
G Pax7 paired box 7 acts_upstream_of_or_within ISO MGI:97487 (MGI:1321412|PMID:9858722) RGD PMID:9858722 MGI:1321412 NCBI chr 5:151,996,368...152,098,023
Ensembl chr 5:151,999,092...152,097,979
JBrowse link
G Tal1 TAL bHLH transcription factor 1, erythroid differentiation factor acts_upstream_of_or_within ISO MGI:109360 (MGI:3840011|PMID:19323994) RGD PMID:19323994 MGI:3840011 NCBI chr 5:128,586,776...128,600,976
Ensembl chr 5:128,587,701...128,600,976
JBrowse link
G Wnt1 Wnt family member 1 acts_upstream_of_or_within ISO MGI:98956 (MGI:2176385|PMID:11877374) RGD PMID:11877374 MGI:2176385 NCBI chr 7:129,938,604...129,942,651
Ensembl chr 7:129,938,604...129,942,651
JBrowse link
G Wnt3a Wnt family member 3A acts_upstream_of_or_within ISO MGI:98953 (MGI:2176385|PMID:11877374) RGD PMID:11877374 MGI:2176385 NCBI chr10:44,034,174...44,078,463
Ensembl chr10:44,034,194...44,078,324
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20094
    developmental process 7006
      anatomical structure development 6444
        dorsal spinal cord development 22
          spinal cord association neuron differentiation 14
            negative regulation of spinal cord association neuron differentiation 0
            positive regulation of spinal cord association neuron differentiation + 0
            regulation of spinal cord association neuron differentiation + 0
            spinal cord association neuron specification 0
Path 2
Term Annotations click to browse term
  biological_process 20094
    developmental process 7006
      anatomical structure development 6444
        multicellular organism development 5224
          system development 4484
            nervous system development 2804
              neurogenesis 2011
                generation of neurons 1743
                  neuron differentiation 1667
                    central nervous system neuron differentiation 225
                      spinal cord association neuron differentiation 14
                        negative regulation of spinal cord association neuron differentiation 0
                        positive regulation of spinal cord association neuron differentiation + 0
                        regulation of spinal cord association neuron differentiation + 0
                        spinal cord association neuron specification 0
paths to the root