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ONTOLOGY REPORT - ANNOTATIONS


Term:spinal cord association neuron differentiation
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Accession:GO:0021527 term browser browse the term
Definition:The process in which neuroepithelial cells in the neural tube acquire specialized structural and/or functional features of association neurons. Association neurons are cells located in the dorsal portion of the spinal cord that integrate sensory input. Differentiation includes the processes involved in commitment of a cell to a specific fate.
Synonyms:exact_synonym: spinal cord dorsal interneuron differentiation


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spinal cord association neuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ascl1 achaete-scute family bHLH transcription factor 1 acts_upstream_of_or_within ISO MGI:1857470 (MGI:3639800|PMID:16715081) RGD PMID:16715081 MGI:3639800 NCBI chr 7:28,038,662...28,040,504
Ensembl chr 7:28,038,662...28,040,510
JBrowse link
G Gdf7 growth differentiation factor 7 acts_upstream_of_or_within ISO MGI:2386906 (MGI:1353705|PMID:10693795) RGD PMID:10693795 MGI:1353705 NCBI chr 6:33,496,596...33,507,626
Ensembl chr 6:33,503,217...33,507,542
JBrowse link
G Gsx1 GS homeobox 1 acts_upstream_of_or_within ISO MGI:95843 (MGI:3639800|PMID:16715081) RGD PMID:16715081 MGI:3639800 NCBI chr12:9,605,873...9,607,168
Ensembl chr12:9,605,873...9,607,168
JBrowse link
G Gsx2 GS homeobox 2 acts_upstream_of_or_within ISO MGI:95842 (MGI:3639800|PMID:16715081) RGD PMID:16715081 MGI:3639800 NCBI chr14:35,650,985...35,652,709
Ensembl chr14:35,650,985...35,652,709
JBrowse link
G Lhx1 LIM homeobox 1 involved_in ISS
ISO
GO_REF:0000024
UniProtKB:P61375 (MGI:3695495|PMID:17166926)
UniProt
RGD
PMID:17166926 GO_REF:0000024 MGI:3695495 NCBI chr10:71,843,991...71,849,293
Ensembl chr10:71,843,991...71,849,293
JBrowse link
G Lhx3 LIM homeobox 3 acts_upstream_of_or_within ISO (MGI:3840011|PMID:19323994) RGD PMID:19323994 MGI:3840011 NCBI chr 3:3,653,861...3,662,509
Ensembl chr 3:3,654,755...3,661,810
JBrowse link
G Lhx5 LIM homeobox 5 involved_in ISO UniProtKB:P63006 (MGI:3695495|PMID:17166926) RGD PMID:17166926 MGI:3695495 NCBI chr12:41,663,000...41,671,437
Ensembl chr12:41,663,000...41,671,437
JBrowse link
G Lmo4 LIM domain only 4 acts_upstream_of_or_within ISO MGI:98480 (MGI:3840011|PMID:19323994) RGD PMID:19323994 MGI:3840011 NCBI chr 2:250,218,635...250,235,435
Ensembl chr 2:250,218,641...250,241,673
JBrowse link
G Mdga1 MAM domain containing glycosylphosphatidylinositol anchor 1 involved_in IEP PMID:15019943 HGNC-UCL PMID:15019943 RGD:8554528 NCBI chr20:8,515,142...8,574,632
Ensembl chr20:8,515,142...8,574,082
JBrowse link
G Pax3 paired box 3 acts_upstream_of_or_within ISO MGI:97491 (MGI:1321412|PMID:9858722) RGD PMID:9858722 MGI:1321412 NCBI chr 9:84,004,004...84,101,226
Ensembl chr 9:84,005,183...84,101,172
JBrowse link
G Pax7 paired box 7 acts_upstream_of_or_within ISO MGI:97487 (MGI:1321412|PMID:9858722) RGD PMID:9858722 MGI:1321412 NCBI chr 5:158,211,001...158,313,510
Ensembl chr 5:158,214,616...158,313,426
JBrowse link
G Tal1 TAL bHLH transcription factor 1, erythroid differentiation factor acts_upstream_of_or_within ISO MGI:109360 (MGI:3840011|PMID:19323994) RGD PMID:19323994 MGI:3840011 NCBI chr 5:133,864,401...133,878,604
Ensembl chr 5:133,864,798...133,878,830
JBrowse link
G Wnt1 Wnt family member 1 acts_upstream_of_or_within ISO MGI:98956 (MGI:2176385|PMID:11877374) RGD PMID:11877374 MGI:2176385 NCBI chr 7:140,464,999...140,469,046
Ensembl chr 7:140,464,999...140,469,046
JBrowse link
G Wnt3a Wnt family member 3A acts_upstream_of_or_within ISO MGI:98953 (MGI:2176385|PMID:11877374) RGD PMID:11877374 MGI:2176385 NCBI chr10:45,598,898...45,643,151
Ensembl chr10:45,598,912...45,638,035
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19610
    developmental process 6757
      anatomical structure development 6182
        dorsal spinal cord development 22
          spinal cord association neuron differentiation 14
            negative regulation of spinal cord association neuron differentiation 0
            positive regulation of spinal cord association neuron differentiation + 0
            regulation of spinal cord association neuron differentiation + 0
            spinal cord association neuron specification 0
Path 2
Term Annotations click to browse term
  biological_process 19610
    developmental process 6757
      anatomical structure development 6182
        multicellular organism development 5619
          system development 5290
            nervous system development 2720
              neurogenesis 1937
                generation of neurons 1782
                  neuron differentiation 1614
                    central nervous system neuron differentiation 242
                      spinal cord association neuron differentiation 14
                        negative regulation of spinal cord association neuron differentiation 0
                        positive regulation of spinal cord association neuron differentiation + 0
                        regulation of spinal cord association neuron differentiation + 0
                        spinal cord association neuron specification 0
paths to the root