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ONTOLOGY REPORT - ANNOTATIONS

Term:ventral spinal cord development
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Accession:GO:0021517 term browser browse the term
Definition:The process whose specific outcome is the progression of the ventral region of the spinal cord over time, from its formation to the mature structure. The neurons of the ventral region of the mature spinal cord participate in motor output.


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ventral spinal cord development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G C4h2orf81 similar to human chromosome 2 open reading frame 81 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 4:117,219,357...117,225,633
Ensembl chr 4:115,661,638...115,703,815 		JBrowse link
G Dab1 DAB adaptor protein 1 involved_in IEA
ISO		 GO_REF:0000107
(PMID:20711475)		 Ensembl
RGD		 PMID:20711475 GO_REF:0000107 NCBI chr 5:123,621,510...124,742,585
Ensembl chr 5:119,140,533...119,510,552 		JBrowse link
G Dctn1 dynactin subunit 1 involved_in ISO
IEA		 (PMID:18305234)
GO_REF:0000107		 RGD
Ensembl		 PMID:18305234 GO_REF:0000107 NCBI chr 4:117,228,722...117,261,528
Ensembl chr 4:115,661,638...115,703,815 		JBrowse link
G Foxp1 forkhead box P1 involved_in ISO (PMID:20711475) RGD PMID:20711475 NCBI chr 4:133,117,346...133,808,647
Ensembl chr 4:131,564,756...132,112,258 		JBrowse link
G Gli2 GLI family zinc finger 2 acts_upstream_of_or_within ISO MGI:2158472 (PMID:11748151) RGD PMID:11748151 NCBI chr13:32,499,678...32,716,418
Ensembl chr13:29,946,809...30,163,574 		JBrowse link
G Lhx1 LIM homeobox 1 involved_in ISO
IEA		 (PMID:20711475)
GO_REF:0000107		 RGD
Ensembl		 PMID:20711475 GO_REF:0000107 NCBI chr10:69,894,288...69,901,076
Ensembl chr10:69,396,829...69,403,617 		JBrowse link
G Lrp8 LDL receptor related protein 8 involved_in IBA
IEA
ISO		 GO_REF:0000033
GO_REF:0000107
(PMID:20711475)		 GO_Central
Ensembl
RGD		 PMID:20711475 GO_REF:0000033 GO_REF:0000107 NCBI chr 5:127,792,236...127,864,207
Ensembl chr 5:122,563,453...122,631,352 		JBrowse link
G Pax6 paired box 6 involved_in ISO
IEA		 (PMID:20844123)
GO_REF:0000107		 RGD
Ensembl		 PMID:20844123 GO_REF:0000107 NCBI chr 3:112,590,034...112,611,771
Ensembl chr 3:92,135,637...92,157,014 		JBrowse link
G Reln reelin involved_in ISO (PMID:20711475) RGD PMID:20711475 NCBI chr 4:13,628,440...14,055,201
Ensembl chr 4:12,736,130...13,162,211 		JBrowse link
G Vldlr very low density lipoprotein receptor involved_in IEA
ISO		 GO_REF:0000107
(PMID:20711475)		 Ensembl
RGD		 PMID:20711475 GO_REF:0000107 NCBI chr 1:234,239,769...234,272,150
Ensembl chr 1:224,814,377...224,845,920 		JBrowse link
G Vstm5 V-set and transmembrane domain containing 5 involved_in ISO (PMID:25826454) RGD PMID:25826454 NCBI chr 8:12,080,019...12,100,443
Ensembl chr 8:12,080,203...12,100,427 		JBrowse link
medial motor column neuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lhx3 LIM homeobox 3 acts_upstream_of_or_within ISO
IEA		 MGI:101776 (PMID:9865699)
GO_REF:0000107		 RGD
Ensembl		 PMID:9865699 GO_REF:0000107 NCBI chr 3:29,424,620...29,432,637
Ensembl chr 3:9,027,425...9,034,480 		JBrowse link
G Lhx4 LIM homeobox 4 acts_upstream_of_or_within ISO
IEA		 MGI:102673 (PMID:9865699)
GO_REF:0000107		 RGD
Ensembl		 PMID:9865699 GO_REF:0000107 NCBI chr13:67,877,109...67,917,219
Ensembl chr13:67,877,109...67,927,003 		JBrowse link
smoothened signaling pathway involved in spinal cord motor neuron cell fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gli2 GLI family zinc finger 2 acts_upstream_of_or_within ISO MGI:95729 (PMID:15215207) RGD PMID:15215207 NCBI chr13:32,499,678...32,716,418
Ensembl chr13:29,946,809...30,163,574 		JBrowse link
G Gli3 GLI family zinc finger 3 acts_upstream_of_or_within ISO
IEA		 MGI:95728 (PMID:15215207)
GO_REF:0000107		 RGD
Ensembl		 PMID:15215207 GO_REF:0000107 NCBI chr17:54,134,064...54,405,198
Ensembl chr17:49,438,567...49,709,712 		JBrowse link
G Sufu SUFU negative regulator of hedgehog signaling acts_upstream_of_or_within ISO
IEA		 MGI:4840420 (PMID:19684112)
GO_REF:0000107		 RGD
Ensembl		 PMID:19684112 GO_REF:0000107 NCBI chr 1:255,199,108...255,296,983
Ensembl chr 1:245,257,768...245,355,577 		JBrowse link
smoothened signaling pathway involved in ventral spinal cord interneuron specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gli2 GLI family zinc finger 2 acts_upstream_of_or_within ISO MGI:95729 (PMID:15215207) RGD PMID:15215207 NCBI chr13:32,499,678...32,716,418
Ensembl chr13:29,946,809...30,163,574 		JBrowse link
G Gli3 GLI family zinc finger 3 acts_upstream_of_or_within ISO
IEA		 MGI:95728 (PMID:15215207)
GO_REF:0000107		 RGD
Ensembl		 PMID:15215207 GO_REF:0000107 NCBI chr17:54,134,064...54,405,198
Ensembl chr17:49,438,567...49,709,712 		JBrowse link
G Sufu SUFU negative regulator of hedgehog signaling acts_upstream_of_or_within ISO
IEA		 MGI:4840420 (PMID:19684112)
GO_REF:0000107		 RGD
Ensembl		 PMID:19684112 GO_REF:0000107 NCBI chr 1:255,199,108...255,296,983
Ensembl chr 1:245,257,768...245,355,577 		JBrowse link
somatic motor neuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cln8 CLN8, transmembrane ER and ERGIC protein acts_upstream_of_or_within ISO
IEA		 (PMID:21052544)
GO_REF:0000107		 RGD
Ensembl		 PMID:21052544 GO_REF:0000107 NCBI chr16:81,451,941...81,462,046
Ensembl chr16:74,749,662...74,759,774 		JBrowse link
G Phox2a paired-like homeobox 2a acts_upstream_of_or_within ISO
IEA		 MGI:3521825 (PMID:16319924)
GO_REF:0000107		 RGD
Ensembl		 PMID:16319924 GO_REF:0000107 NCBI chr 1:156,178,754...156,183,118
Ensembl chr 1:156,178,754...156,183,118 		JBrowse link
G Tctn1 tectonic family member 1 acts_upstream_of_or_within ISO
IEA		 MGI:3716885 (PMID:16357211)
GO_REF:0000107		 RGD
Ensembl		 PMID:16357211 GO_REF:0000107 NCBI chr12:34,309,795...34,347,190
Ensembl chr12:34,309,897...34,342,267 		JBrowse link
spinal cord motor neuron cell fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hoxc10 homeo box C10 acts_upstream_of_or_within ISO
IEA		 MGI:96202 (PMID:18065432)
GO_REF:0000107		 RGD
Ensembl		 PMID:18065432 GO_REF:0000107 NCBI chr 7:134,103,741...134,108,966
Ensembl chr 7:134,103,643...134,108,966 		JBrowse link
G Hoxd10 homeo box D10 acts_upstream_of_or_within ISO
IEA		 MGI:96192 (PMID:18065432)
GO_REF:0000107		 RGD
Ensembl		 PMID:18065432 GO_REF:0000107 NCBI chr 3:80,001,947...80,005,156
Ensembl chr 3:59,594,516...59,597,725 		JBrowse link
G Isl1 ISL LIM homeobox 1 acts_upstream_of_or_within ISO
IEA		 MGI:102673 (PMID:19666821)
GO_REF:0000107		 RGD
Ensembl		 PMID:19666821 GO_REF:0000107 NCBI chr 2:49,813,618...49,823,442
Ensembl chr 2:48,080,522...48,095,584 		JBrowse link
G Isl2 ISL LIM homeobox 2 acts_upstream_of_or_within ISO
IEA		 MGI:102673 (PMID:19666821)
GO_REF:0000107		 RGD
Ensembl		 PMID:19666821 GO_REF:0000107 NCBI chr 8:55,923,805...55,928,790
Ensembl chr 8:55,923,805...55,928,790 		JBrowse link
G Lhx3 LIM homeobox 3 acts_upstream_of_or_within ISO
IEA		 MGI:101791|MGI:109156 (PMID:19666821)
GO_REF:0000107		 RGD
Ensembl		 PMID:19666821 GO_REF:0000107 NCBI chr 3:29,424,620...29,432,637
Ensembl chr 3:9,027,425...9,034,480 		JBrowse link
G Lmo4 LIM domain only 4 involved_in ISO (PMID:18539116) RGD PMID:18539116 NCBI chr 2:235,924,574...235,941,609
Ensembl chr 2:233,264,182...233,280,880 		JBrowse link
G Mnx1 motor neuron and pancreas homeobox 1 involved_in
acts_upstream_of_or_within		 IBA
IEA
ISO		 GO_REF:0000033
GO_REF:0000002
(PMID:18539116)
MGI:2182358|MGI:2182361|MGI:2182363 (PMID:10482234)		 GO_Central
InterPro
RGD		 PMID:10482234 PMID:18539116 GO_REF:0000002 GO_REF:0000033 NCBI chr 4:5,866,506...5,871,465
Ensembl chr 4:5,866,506...5,871,465 		JBrowse link
G Olig3 oligodendrocyte transcription factor 3 acts_upstream_of_or_within ISO
IEA		 MGI:3573868 (PMID:15769945)
GO_REF:0000107		 RGD
Ensembl		 PMID:15769945 GO_REF:0000107 NCBI chr 1:14,081,259...14,083,336
Ensembl chr 1:14,081,328...14,082,149 		JBrowse link
spinal cord motor neuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07063281.1 acts_upstream_of_or_within IEA GO_REF:0000107 Ensembl GO_REF:0000107
G Abt1 activator of basal transcription 1 acts_upstream_of_or_within ISO
IEA		 MGI:99954 (PMID:19299493)
GO_REF:0000107		 RGD
Ensembl		 PMID:19299493 GO_REF:0000107 NCBI chr17:41,699,151...41,701,253
Ensembl chr17:41,699,147...41,701,259 		JBrowse link
G Cacna1a calcium voltage-gated channel subunit alpha1 A acts_upstream_of_or_within ISO MGI:1856209|MGI:1856211 (PMID:17156092) RGD PMID:17156092 NCBI chr19:40,425,560...40,724,810
Ensembl chr19:23,520,741...23,823,225 		JBrowse link
G Cln8 CLN8, transmembrane ER and ERGIC protein acts_upstream_of_or_within ISO
IEA		 MGI:1856959 (PMID:2061715)
GO_REF:0000107		 RGD
Ensembl		 PMID:2061715 GO_REF:0000107 NCBI chr16:81,451,941...81,462,046
Ensembl chr16:74,749,662...74,759,774 		JBrowse link
G Dicer1 dicer 1 ribonuclease III acts_upstream_of_or_within ISO MGI:3589208 (PMID:21338882) RGD PMID:21338882 NCBI chr 6:129,392,298...129,457,252
Ensembl chr 6:123,631,250...123,693,965 		JBrowse link
G Dync2h1 dynein cytoplasmic 2 heavy chain 1 acts_upstream_of_or_within ISO
IEA		 MGI:105373|MGI:95729|MGI:98297 (PMID:21552265)
GO_REF:0000107		 RGD
Ensembl		 PMID:21552265 GO_REF:0000107 NCBI chr 8:12,473,955...12,697,075
Ensembl chr 8:4,189,257...4,412,183 		JBrowse link
G Gbx1 gastrulation brain homeobox 1 acts_upstream_of_or_within ISO
IEA		 (PMID:23418536)
GO_REF:0000107		 RGD
Ensembl		 PMID:23418536 GO_REF:0000107 NCBI chr 4:10,645,957...10,672,486
Ensembl chr 4:10,645,957...10,672,486 		JBrowse link
G Gdpd5 glycerophosphodiester phosphodiesterase domain containing 5 acts_upstream_of_or_within ISO MGI:5302017 (PMID:21943603) RGD PMID:21943603 NCBI chr 1:153,679,718...153,761,452
Ensembl chr 1:153,679,718...153,761,446 		JBrowse link
G Gigyf2 GRB10 interacting GYF protein 2 acts_upstream_of_or_within ISO
IEA		 MGI:4126459 (PMID:19744960)
GO_REF:0000107		 RGD
Ensembl		 PMID:19744960 GO_REF:0000107 NCBI chr 9:95,449,143...95,574,927
Ensembl chr 9:88,001,301...88,125,715 		JBrowse link
G Gli2 GLI family zinc finger 2 acts_upstream_of_or_within ISO MGI:1857509 (PMID:21552265) RGD PMID:21552265 NCBI chr13:32,499,678...32,716,418
Ensembl chr13:29,946,809...30,163,574 		JBrowse link
G Gli3 GLI family zinc finger 3 acts_upstream_of_or_within ISO
IEA		 MGI:107736 (PMID:21552265)
GO_REF:0000107		 RGD
Ensembl		 PMID:21552265 GO_REF:0000107 NCBI chr17:54,134,064...54,405,198
Ensembl chr17:49,438,567...49,709,712 		JBrowse link
G Ift172 intraflagellar transport 172 acts_upstream_of_or_within ISO
IEA		 MGI:2682066 (PMID:21552265)
GO_REF:0000107		 RGD
Ensembl		 PMID:21552265 GO_REF:0000107 NCBI chr 6:30,801,841...30,841,239
Ensembl chr 6:25,081,980...25,120,860 		JBrowse link
G Ighmbp2 immunoglobulin mu DNA binding protein 2 acts_upstream_of_or_within ISO MGI:1857648 (PMID:19299493) RGD PMID:19299493 NCBI chr 1:209,935,922...209,958,570
Ensembl chr 1:200,506,338...200,529,514 		JBrowse link
G Isl1 ISL LIM homeobox 1 acts_upstream_of_or_within ISO
IEA		 MGI:2182246 (PMID:8565076)
GO_REF:0000107		 RGD
Ensembl		 PMID:8565076 GO_REF:0000107 NCBI chr 2:49,813,618...49,823,442
Ensembl chr 2:48,080,522...48,095,584 		JBrowse link
G Lbx1 ladybird homeobox 1 acts_upstream_of_or_within ISO
IEA		 MGI:2149955 (PMID:15769945)
GO_REF:0000107		 RGD
Ensembl		 PMID:15769945 GO_REF:0000107 NCBI chr 1:254,033,009...254,034,826
Ensembl chr 1:244,083,873...244,085,690 		JBrowse link
G Lmo4 LIM domain only 4 acts_upstream_of_or_within ISO (PMID:19666821) RGD PMID:19666821 NCBI chr 2:235,924,574...235,941,609
Ensembl chr 2:233,264,182...233,280,880 		JBrowse link
G Lonrf2 LON peptidase N-terminal domain and ring finger 2 acts_upstream_of_or_within ISO
IEA		 (PMID:37474791)
GO_REF:0000107		 RGD
Ensembl		 PMID:37474791 GO_REF:0000107 NCBI chr 9:41,033,125...41,070,551
Ensembl chr 9:41,034,628...41,070,649 		JBrowse link
G Mdga2 MAM domain containing glycosylphosphatidylinositol anchor 2 involved_in IEP PMID:15019943 HGNC-UCL PMID:15019943 RGD:8554528 NCBI chr 6:90,482,687...91,346,784
Ensembl chr 6:84,761,941...85,608,126 		JBrowse link
G Mir17 microRNA 17 acts_upstream_of_or_within ISO MGI:2676844|MGI:2676868|MGI:2676872|MGI:3618743|MGI:3619438|MGI:3629917|MGI:3629918|MGI:3790968 (PMID:21338882) RGD PMID:21338882 NCBI chr15:98,587,848...98,587,931
Ensembl chr15:92,180,629...92,180,712 		JBrowse link
G Mir18a microRNA 18a acts_upstream_of_or_within ISO MGI:2676868|MGI:2676872|MGI:3618743|MGI:3619065|MGI:3619438|MGI:3629917|MGI:3629918 (PMID:21338882) RGD PMID:21338882 NCBI chr15:98,587,984...98,588,079
Ensembl chr15:92,180,765...92,180,860 		JBrowse link
G Mir19a microRNA 19a acts_upstream_of_or_within ISO MGI:2676844|MGI:2676872|MGI:3619065|MGI:3629917|MGI:3629918 (PMID:21338882) RGD PMID:21338882 NCBI chr15:98,588,131...98,588,212
Ensembl chr15:92,180,912...92,180,993 		JBrowse link
G Mir19b1 microRNA 19b-1 acts_upstream_of_or_within ISO MGI:2676844|MGI:2676872|MGI:3618743|MGI:3619065|MGI:3629918 (PMID:21741442) RGD PMID:21741442 NCBI chr15:98,588,433...98,588,519
Ensembl chr15:92,181,214...92,181,300 		JBrowse link
G Mir20a microRNA 20a acts_upstream_of_or_within ISO MGI:2676844|MGI:3618743|MGI:3619065|MGI:3629917|MGI:3629918 (PMID:21338882) RGD PMID:21338882 NCBI chr15:98,588,303...98,588,387
Ensembl chr15:92,181,084...92,181,168 		JBrowse link
G Mir92a1 microRNA 92a-1 acts_upstream_of_or_within ISO MGI:2676844|MGI:2676872|MGI:3618743|MGI:3619065|MGI:3629917 (PMID:21338882) RGD PMID:21338882 NCBI chr15:98,588,555...98,588,632
Ensembl chr15:92,181,336...92,181,413 		JBrowse link
G Nfe2l1 NFE2 like bZIP transcription factor 1 acts_upstream_of_or_within ISO
IEA		 MGI:3828165 (PMID:21554501)
GO_REF:0000107		 RGD
Ensembl		 PMID:21554501 GO_REF:0000107 NCBI chr10:82,296,824...82,309,472
Ensembl chr10:81,800,366...81,832,318 		JBrowse link
G Nkx2-2 NK2 homeobox 2 acts_upstream_of_or_within ISO
IEA		 MGI:1932100 (PMID:10217145)
GO_REF:0000107		 RGD
Ensembl		 PMID:10217145 GO_REF:0000107 NCBI chr 3:155,072,621...155,083,699
Ensembl chr 3:134,620,039...134,622,411 		JBrowse link
G Olig2 oligodendrocyte transcription factor 2 acts_upstream_of_or_within ISO MGI:3774124 (PMID:21338882) RGD PMID:21338882 NCBI chr11:43,961,585...43,964,961
Ensembl chr11:30,475,398...30,480,152 		JBrowse link
G Olig3 oligodendrocyte transcription factor 3 acts_upstream_of_or_within ISO
IEA		 MGI:104867|MGI:3573868 (PMID:15674731), (PMID:15769945)
GO_REF:0000107		 RGD
Ensembl		 PMID:15674731 PMID:15769945 GO_REF:0000107 NCBI chr 1:14,081,259...14,083,336
Ensembl chr 1:14,081,328...14,082,149 		JBrowse link
G Ptch1 patched 1 acts_upstream_of_or_within ISO
IEA		 MGI:107736 (PMID:21552265)
GO_REF:0000107		 RGD
Ensembl		 PMID:21552265 GO_REF:0000107 NCBI chr17:1,548,449...1,613,461
Ensembl chr17:1,542,877...1,607,333 		JBrowse link
G Scyl1 SCY1 like pseudokinase 1 acts_upstream_of_or_within ISO MGI:1921385|MGI:5469960 (PMID:29437892) RGD PMID:29437892 NCBI chr 1:212,475,198...212,489,285
Ensembl chr 1:203,045,741...203,059,533 		JBrowse link
G Scyl3 SCY1 like pseudokinase 3 acts_upstream_of_or_within ISO
IEA		 MGI:1931787 (PMID:29437892)
GO_REF:0000107		 RGD
Ensembl		 PMID:29437892 GO_REF:0000107 NCBI chr13:76,278,428...76,303,038
Ensembl chr13:76,278,428...76,301,716 		JBrowse link
G Shh sonic hedgehog signaling molecule acts_upstream_of_or_within ISO
IEA		 MGI:107736 (PMID:21552265)
GO_REF:0000107		 RGD
Ensembl		 PMID:21552265 GO_REF:0000107 NCBI chr 4:7,687,872...7,697,025
Ensembl chr 4:6,954,017...6,963,170 		JBrowse link
ventral spinal cord interneuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxn4 forkhead box N4 involved_in ISO
IEA		 (PMID:20844123)
GO_REF:0000107		 RGD
Ensembl		 PMID:20844123 GO_REF:0000107 NCBI chr12:42,336,706...42,359,932
Ensembl chr12:42,340,323...42,359,921 		JBrowse link
G Gata2 GATA binding protein 2 acts_upstream_of_or_within ISO
IEA		 MGI:1857743 (PMID:10934027)
GO_REF:0000107		 RGD
Ensembl		 PMID:10934027 GO_REF:0000107 NCBI chr 4:122,211,501...122,225,058
Ensembl chr 4:120,658,986...120,667,761 		JBrowse link
G Lmo4 LIM domain only 4 acts_upstream_of_or_within ISO (PMID:19666821) RGD PMID:19666821 NCBI chr 2:235,924,574...235,941,609
Ensembl chr 2:233,264,182...233,280,880 		JBrowse link
ventral spinal cord interneuron fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ascl1 achaete-scute family bHLH transcription factor 1 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:16020526)		 UniProt
Ensembl
RGD		 PMID:16020526 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:23,790,642...23,793,509
Ensembl chr 7:21,903,126...21,905,993 		JBrowse link
G Dll4 delta like canonical Notch ligand 4 involved_in ISO
IEA		 UniProtKB:Q8K3Q3 (PMID:17728344)
GO_REF:0000107		 RGD
Ensembl		 PMID:17728344 GO_REF:0000107 NCBI chr 3:126,770,945...126,780,769
Ensembl chr 3:106,316,986...106,326,931 		JBrowse link
G Foxn4 forkhead box N4 involved_in ISO
IEA		 (PMID:16020526), (PMID:17728344)
GO_REF:0000107		 RGD
Ensembl		 PMID:16020526 PMID:17728344 GO_REF:0000107 NCBI chr12:42,336,706...42,359,932
Ensembl chr12:42,340,323...42,359,921 		JBrowse link
ventral spinal cord interneuron fate determination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nkx2-2 NK2 homeobox 2 acts_upstream_of_or_within ISO
IEA		 MGI:1932100 (PMID:10217145)
GO_REF:0000107		 RGD
Ensembl		 PMID:10217145 GO_REF:0000107 NCBI chr 3:155,072,621...155,083,699
Ensembl chr 3:134,620,039...134,622,411 		JBrowse link
ventral spinal cord interneuron specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dbx1 developing brain homeobox 1 acts_upstream_of_or_within ISO
IEA		 MGI:2182329 (PMID:11239429)
GO_REF:0000107		 RGD
Ensembl		 PMID:11239429 GO_REF:0000107 NCBI chr 1:99,348,638...99,354,173
Ensembl chr 1:99,349,608...99,354,038 		JBrowse link
G Dmrt3 doublesex and mab-3 related transcription factor 3 acts_upstream_of_or_within ISO
IEA		 MGI:4420993 (PMID:22932389)
GO_REF:0000107		 RGD
Ensembl		 PMID:22932389 GO_REF:0000107 NCBI chr 1:223,244,340...223,264,254
Ensembl chr 1:223,248,747...223,262,530 		JBrowse link
G Lhx3 LIM homeobox 3 acts_upstream_of_or_within ISO
IEA		 (PMID:19666821)
GO_REF:0000107		 RGD
Ensembl		 PMID:19666821 GO_REF:0000107 NCBI chr 3:29,424,620...29,432,637
Ensembl chr 3:9,027,425...9,034,480 		JBrowse link
G Shh sonic hedgehog signaling molecule acts_upstream_of_or_within IDA PMID:9230312 MGI PMID:9230312 RGD:8553789 NCBI chr 4:7,687,872...7,697,025
Ensembl chr 4:6,954,017...6,963,170 		JBrowse link
G Sox1 SRY-box transcription factor 1 acts_upstream_of_or_within ISO MGI:3653406 (PMID:20844123) RGD PMID:20844123 NCBI chr16:83,837,689...83,841,703
Ensembl chr16:77,137,584...77,138,762 		JBrowse link
visceral motor neuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Isl1 ISL LIM homeobox 1 acts_upstream_of_or_within ISO
IEA		 MGI:109156 (PMID:14766174)
GO_REF:0000107		 RGD
Ensembl		 PMID:14766174 GO_REF:0000107 NCBI chr 2:49,813,618...49,823,442
Ensembl chr 2:48,080,522...48,095,584 		JBrowse link
G Isl2 ISL LIM homeobox 2 acts_upstream_of_or_within ISO
IEA		 MGI:101791|MGI:3046260 (PMID:14766174)
GO_REF:0000107		 RGD
Ensembl		 PMID:14766174 GO_REF:0000107 NCBI chr 8:55,923,805...55,928,790
Ensembl chr 8:55,923,805...55,928,790 		JBrowse link
G Tbx20 T-box transcription factor 20 involved_in ISO
IEA		 (PMID:15843409)
GO_REF:0000107		 RGD
Ensembl		 PMID:15843409 GO_REF:0000107 NCBI chr 8:31,475,963...31,534,051
Ensembl chr 8:23,204,507...23,258,175 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20558
    developmental process 7149
      anatomical structure development 6646
        ventral spinal cord development 59
          spinal cord motor neuron differentiation + 42
          ventral spinal cord interneuron differentiation + 14
Path 2
Term Annotations click to browse term
  biological_process 20558
    developmental process 7149
      anatomical structure development 6646
        multicellular organism development 5353
          system development 4635
            nervous system development 2872
              central nervous system development 1232
                spinal cord development 145
                  ventral spinal cord development 59
                    spinal cord motor neuron differentiation + 42
                    ventral spinal cord interneuron differentiation + 14
paths to the root