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ONTOLOGY REPORT - ANNOTATIONS


Term:dorsal spinal cord development
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Accession:GO:0021516 term browser browse the term
Definition:The process whose specific outcome is the progression of the dorsal region of the spinal cord over time, from its formation to the mature structure. The dorsal region of the mature spinal cord contains neurons that process and relay sensory input.


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dorsal spinal cord development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DAAM2 dishevelled associated activator of morphogenesis 2 involved_in ISO (MGI:6114828|PMID:22227309) UniProt PMID:22227309 MGI:6114828 NCBI chr12:8,686,653...8,801,903
Ensembl chr12:8,748,655...8,799,059
JBrowse link
G DRAXIN dorsal inhibitory axon guidance protein involved_in ISO (MGI:3832346|PMID:19150847) UniProt PMID:19150847 MGI:3832346 NCBI chr 2:84,515,881...84,525,797
Ensembl chr 2:84,515,811...84,526,387
JBrowse link
G DRGX dorsal root ganglia homeobox acts_upstream_of_or_within ISO (MGI:3694508|PMID:16978876) MGI PMID:16978876 MGI:3694508 NCBI chr28:1,281,868...1,316,624
Ensembl chr28:1,281,864...1,314,932
JBrowse link
G GDNF glial cell derived neurotrophic factor involved_in ISO (MGI:5440338|PMID:22998873) ARUK-UCL PMID:22998873 MGI:5440338 NCBI chr 4:70,966,694...70,991,860
Ensembl chr 4:70,971,432...70,989,714
JBrowse link
G HOXB8 homeobox B8 acts_upstream_of_or_within ISO (MGI:1349283|PMID:10559485), (MGI:3789512|PMID:18430798) MGI PMID:10559485 PMID:18430798 MGI:1349283 MGI:3789512 NCBI chr 9:24,874,893...24,888,981
Ensembl chr 9:24,874,899...24,877,504
JBrowse link
G PBX3 PBX homeobox 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3772548|PMID:18155191) Ensembl
MGI
PMID:18155191 GO_REF:0000107 MGI:3772548 NCBI chr 9:57,198,531...57,429,820
Ensembl chr 9:57,199,812...57,429,811
JBrowse link
G RFX4 regulatory factor X4 acts_upstream_of_or_within ISO (MGI:2669568|PMID:12925582) MGI PMID:12925582 MGI:2669568 NCBI chr10:31,993,339...32,155,896
Ensembl chr10:31,994,594...32,155,500
JBrowse link
G UNCX UNC homeobox acts_upstream_of_or_within ISO (MGI:1855902|PMID:10804168)
(MGI:1855901|PMID:10804169)
MGI PMID:10804168 PMID:10804169 MGI:1855901 MGI:1855902 NCBI chr 6:15,652,600...15,657,016
Ensembl chr 6:15,653,576...15,657,927
JBrowse link
spinal cord association neuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASCL1 achaete-scute family bHLH transcription factor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3639800|PMID:16715081) Ensembl
MGI
PMID:16715081 GO_REF:0000107 MGI:3639800 NCBI chr15:41,694,021...41,696,933
Ensembl chr15:41,694,269...41,695,391
JBrowse link
G GDF7 growth differentiation factor 7 acts_upstream_of_or_within ISO (MGI:1353705|PMID:10693795) MGI PMID:10693795 MGI:1353705 NCBI chr17:15,627,739...15,636,513 JBrowse link
G GSX1 GS homeobox 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3639800|PMID:16715081) Ensembl
MGI
PMID:16715081 GO_REF:0000107 MGI:3639800 NCBI chr25:11,853,483...11,855,169
Ensembl chr25:11,853,462...11,855,445
JBrowse link
G GSX2 GS homeobox 2 acts_upstream_of_or_within ISO (MGI:3639800|PMID:16715081) MGI PMID:16715081 MGI:3639800 NCBI chr13:46,640,172...46,642,405
Ensembl chr13:46,640,172...46,641,546
JBrowse link
G LHX1 LIM homeobox 1 involved_in ISS UniProt GO_REF:0000024 NCBI chr 9:36,760,890...36,768,345
Ensembl chr 9:36,761,826...36,768,164
JBrowse link
G LHX3 LIM homeobox 3 acts_upstream_of_or_within ISO (MGI:3840011|PMID:19323994) MGI PMID:19323994 MGI:3840011 NCBI chr 9:49,248,555...49,254,128
Ensembl chr 9:49,248,621...49,254,118
JBrowse link
G LHX5 LIM homeobox 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr26:10,776,991...10,785,820
Ensembl chr26:10,777,242...10,785,815
JBrowse link
G LMO4 LIM domain only 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3840011|PMID:19323994) Ensembl
MGI
PMID:19323994 GO_REF:0000107 MGI:3840011 NCBI chr 6:60,892,478...60,909,910
Ensembl chr 6:60,727,270...60,941,058
JBrowse link
G MDGA1 MAM domain containing glycosylphosphatidylinositol anchor 1 involved_in ISO PMID:15019943 HGNC-UCL PMID:15019943 RGD:8554528 NCBI chr12:6,655,586...6,716,619
Ensembl chr12:6,659,910...6,686,760
JBrowse link
G PAX3 paired box 3 acts_upstream_of_or_within ISO (MGI:1321412|PMID:9858722) MGI PMID:9858722 MGI:1321412 NCBI chr37:28,346,476...28,443,648
Ensembl chr37:28,346,563...28,444,561
JBrowse link
G PAX7 paired box 7 acts_upstream_of_or_within ISO (MGI:1321412|PMID:9858722) MGI PMID:9858722 MGI:1321412 NCBI chr 2:79,813,835...79,952,490
Ensembl chr 2:79,815,748...79,915,003
JBrowse link
G TAL1 TAL bHLH transcription factor 1, erythroid differentiation factor acts_upstream_of_or_within ISO (MGI:3840011|PMID:19323994) MGI PMID:19323994 MGI:3840011 NCBI chr15:13,446,752...13,462,038
Ensembl chr15:13,449,481...13,462,047
JBrowse link
G WNT1 Wnt family member 1 acts_upstream_of_or_within ISO (MGI:2176385|PMID:11877374) MGI PMID:11877374 MGI:2176385 NCBI chr27:5,588,151...5,592,254
Ensembl chr27:5,574,940...5,592,060
JBrowse link
G WNT3A Wnt family member 3A acts_upstream_of_or_within ISO (MGI:2176385|PMID:11877374) MGI PMID:11877374 MGI:2176385 NCBI chr14:864,393...899,698
Ensembl chr14:863,424...896,412
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 13863
    developmental process 6132
      anatomical structure development 5708
        dorsal spinal cord development 22
          regulation of cell proliferation in dorsal spinal cord + 0
          spinal cord association neuron differentiation + 14
Path 2
Term Annotations click to browse term
  biological_process 13863
    developmental process 6132
      anatomical structure development 5708
        multicellular organism development 5208
          system development 4897
            nervous system development 2522
              central nervous system development 1200
                spinal cord development 140
                  dorsal spinal cord development 22
                    regulation of cell proliferation in dorsal spinal cord + 0
                    spinal cord association neuron differentiation + 14
paths to the root