ONTOLOGY REPORT - ANNOTATIONS
Term: ventral spinal cord interneuron differentiation
Accession: GO:0021514
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Definition: The process in which neuroepithelial cells in the neural tube acquire specialized structural and/or functional features of ventral spinal cord interneurons. Ventral spinal cord interneurons are cells located in the ventral portion of the spinal cord that transmit signals between sensory and motor neurons and are required for reflexive responses. Differentiation includes the processes involved in commitment of a cell to a specific fate.
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Foxn4
forkhead box N4
involved_in
ISO
(MGI:4834949|PMID:20844123)
RGD
PMID:20844123
MGI:4834949
NCBI chr12:42,336,706...42,359,932
Ensembl chr12:42,340,323...42,359,921
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Gata2
GATA binding protein 2
acts_upstream_of_or_within
ISO
MGI:1857743 (PMID:10934027)
RGD
PMID:10934027
NCBI chr 4:120,654,205...120,667,763
Ensembl chr 4:120,658,986...120,667,761
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Lmo4
LIM domain only 4
acts_upstream_of_or_within
ISO
(PMID:19666821)
RGD
PMID:19666821
NCBI chr 2:233,264,180...233,280,881
Ensembl chr 2:233,264,182...233,280,880
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Gli2
GLI family zinc finger 2
acts_upstream_of_or_within
ISO
MGI:95729 (PMID:15215207)
RGD
PMID:15215207
NCBI chr13:29,946,882...30,163,589
Ensembl chr13:29,946,809...30,163,574
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Gli3
GLI family zinc finger 3
acts_upstream_of_or_within
ISO
MGI:95728 (PMID:15215207)
RGD
PMID:15215207
NCBI chr17:49,438,567...49,709,712
Ensembl chr17:49,438,567...49,709,712
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Sufu
SUFU negative regulator of hedgehog signaling
acts_upstream_of_or_within
ISO
MGI:4840420 (PMID:19684112)
RGD
PMID:19684112
NCBI chr 1:245,257,725...245,355,576
Ensembl chr 1:245,257,768...245,355,577
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Ascl1
achaete-scute family bHLH transcription factor 1
involved_in
ISS ISO
GO_REF:0000024 (MGI:3587461|PMID:16020526)
UniProt RGD
PMID:16020526
GO_REF:0000024 MGI:3587461
NCBI chr 7:21,903,136...21,906,003
Ensembl chr 7:21,903,126...21,905,993
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Dll4
delta like canonical Notch ligand 4
involved_in
ISO IEA
UniProtKB:Q8K3Q3 (PMID:17728344) GO_REF:0000107
RGD Ensembl
PMID:17728344
GO_REF:0000107
NCBI chr 3:106,317,114...106,327,004
Ensembl chr 3:106,316,986...106,326,931
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Foxn4
forkhead box N4
involved_in
ISO
(MGI:3587461|PMID:16020526), (MGI:3765356|PMID:17728344)
RGD
PMID:16020526 PMID:17728344
MGI:3587461 MGI:3765356
NCBI chr12:42,336,706...42,359,932
Ensembl chr12:42,340,323...42,359,921
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Nkx2-2
NK2 homeobox 2
acts_upstream_of_or_within
ISO
MGI:1932100 (PMID:10217145)
RGD
PMID:10217145
NCBI chr 3:134,619,701...134,630,282
Ensembl chr 3:134,620,039...134,622,411
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Dbx1
developing brain homeobox 1
acts_upstream_of_or_within
ISO
MGI:2182329 (PMID:11239429)
RGD
PMID:11239429
NCBI chr 1:99,348,638...99,354,173
Ensembl chr 1:99,349,608...99,354,038
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Dmrt3
doublesex and mab-3 related transcription factor 3
acts_upstream_of_or_within
ISO
MGI:4420993 (PMID:22932389)
RGD
PMID:22932389
NCBI chr 1:223,244,340...223,264,254
Ensembl chr 1:223,248,747...223,262,530
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Lhx3
LIM homeobox 3
acts_upstream_of_or_within
ISO
(PMID:19666821)
RGD
PMID:19666821
NCBI chr 3:9,026,432...9,035,122
Ensembl chr 3:9,027,425...9,034,480
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Shh
sonic hedgehog signaling molecule
acts_upstream_of_or_within
IDA
PMID:9230312
MGI
PMID:9230312
RGD:8553789
NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170
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Sox1
SRY-box transcription factor 1
acts_upstream_of_or_within
ISO
MGI:3653406 (PMID:20844123)
RGD
PMID:20844123
NCBI chr16:77,135,577...77,139,592
Ensembl chr16:77,137,584...77,138,762
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