Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   

ONTOLOGY REPORT - ANNOTATIONS


Term:vitamin binding
go back to main search page
Accession:GO:0019842 term browser browse the term
Definition:Binding to a vitamin, one of a number of unrelated organic substances that occur in many foods in small amounts and that are necessary in trace amounts for the normal metabolic functioning of the body.


show annotations for term's descendants           Sort by:
 
vitamin binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GGCX gamma-glutamyl carboxylase enables IBA
ISO
(PMID:21873635) GO_Central
RGD
PMID:12754193 PMID:21873635 RGD:1582507 NCBI chr 3:59,202,363...59,219,807
Ensembl chr 3:59,202,377...59,221,132
JBrowse link
G PANK3 pantothenate kinase 3 enables IEA Ensembl GO_REF:0000107 NCBI chr16:55,313,333...55,340,070
Ensembl chr16:55,313,323...55,340,065
JBrowse link
G PYGL glycogen phosphorylase L enables ISO (PMID:12204691) UniProt PMID:12204691 NCBI chr 1:180,645,849...180,704,124
Ensembl chr 1:180,620,314...180,719,979
JBrowse link
11-cis retinal binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCA4 ATP binding cassette subfamily A member 4 enables IEA Ensembl GO_REF:0000107 NCBI chr 4:123,202,720...123,333,044
Ensembl chr 4:123,202,632...123,331,144
JBrowse link
G LOC100517560 cytochrome P450 27C1 enables ISO (PMID:27059013) UniProt PMID:27059013 NCBI chr15:25,244,585...25,259,545 JBrowse link
G OPN4 opsin 4 enables IEA Ensembl GO_REF:0000107 NCBI chr14:87,645,563...87,660,820
Ensembl chr14:87,644,240...87,722,245
JBrowse link
G OPN5 opsin 5 enables IEA Ensembl GO_REF:0000107 NCBI chr 7:42,476,125...42,507,181
Ensembl chr 7:42,476,125...42,527,121
JBrowse link
G RHO rhodopsin enables ISS UniProt GO_REF:0000024 NCBI chr13:68,908,578...68,913,651
Ensembl chr13:68,908,578...68,913,651
JBrowse link
G RLBP1 retinaldehyde binding protein 1 enables IEA Ensembl GO_REF:0000107 NCBI chr 7:54,783,965...54,800,008
Ensembl chr 7:54,771,978...54,889,014
JBrowse link
all-trans retinal binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCA4 ATP binding cassette subfamily A member 4 enables IEA Ensembl GO_REF:0000107 NCBI chr 4:123,202,720...123,333,044
Ensembl chr 4:123,202,632...123,331,144
JBrowse link
G ADH4 alcohol dehydrogenase 4 (class II), pi polypeptide enables IEA Ensembl GO_REF:0000107 NCBI chr 8:121,225,485...121,259,262
NCBI chr  X:98,582,002...98,583,002
Ensembl chr 8:121,225,656...121,261,747
JBrowse link
G CYP2W1 cytochrome P450 family 2 subfamily W member 1 enables IEA Ensembl GO_REF:0000107 NCBI chr 3:641,997...649,313
Ensembl chr 3:642,494...648,909
JBrowse link
G LOC100517560 cytochrome P450 27C1 enables ISO (PMID:27059013) UniProt PMID:27059013 NCBI chr15:25,244,585...25,259,545 JBrowse link
all-trans-retinol binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CYP2W1 cytochrome P450 family 2 subfamily W member 1 enables IEA Ensembl GO_REF:0000107 NCBI chr 3:641,997...649,313
Ensembl chr 3:642,494...648,909
JBrowse link
G LOC100517560 cytochrome P450 27C1 enables ISO (PMID:27059013) UniProt PMID:27059013 NCBI chr15:25,244,585...25,259,545 JBrowse link
G RBP1 retinol binding protein 1 enables ISO (PMID:28057518) UniProt PMID:28057518 NCBI chr13:80,380,958...80,407,328
Ensembl chr13:80,380,962...80,407,458
JBrowse link
biotin binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACACA acetyl-CoA carboxylase alpha ISO RGD PMID:12949377 RGD:1601566 NCBI chr12:38,580,916...38,875,067
Ensembl chr12:38,581,449...38,875,134
JBrowse link
G ACACB acetyl-CoA carboxylase beta ISO RGD PMID:12949377 RGD:1601566 NCBI chr14:41,621,574...41,739,916 JBrowse link
G HLCS holocarboxylase synthetase enables ISO (PMID:14613969) UniProt PMID:14613969 NCBI chr13:200,406,395...200,618,967
Ensembl chr13:200,407,540...200,608,129
JBrowse link
G PC pyruvate carboxylase enables IEA
ISO
InterPro
RGD
PMID:12949377 GO_REF:0000002 RGD:1601566 NCBI chr 2:5,566,608...5,587,797
Ensembl chr 2:5,518,430...5,587,797
JBrowse link
calcidiol binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GC GC vitamin D binding protein enables IEA Ensembl GO_REF:0000107 NCBI chr 8:68,326,293...68,360,262
Ensembl chr 8:68,326,301...68,360,262
JBrowse link
calcitriol binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G VDR vitamin D receptor enables ISO
IEA
RGD
Ensembl
PMID:8179318 GO_REF:0000107 RGD:8158087 NCBI chr 5:78,205,807...78,266,505
Ensembl chr 5:78,205,810...78,267,321
JBrowse link
cobalamin binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CBLIF cobalamin binding intrinsic factor enables IBA
ISO
(PMID:21873635) GO_Central
RGD
PMID:7150665 PMID:21873635 RGD:1624372 NCBI chr 2:11,655,726...11,674,357
Ensembl chr 2:11,655,767...11,674,302
JBrowse link
G CD320 CD320 molecule enables IEA Ensembl GO_REF:0000107 NCBI chr 2:70,961,897...70,970,289
Ensembl chr 2:70,965,672...70,970,289
JBrowse link
G CUBN cubilin enables IEA UniProt GO_REF:0000043 NCBI chr10:43,102,931...43,414,692
Ensembl chr10:43,102,946...43,414,613
JBrowse link
G MMAB metabolism of cobalamin associated B enables IEA Ensembl GO_REF:0000107 NCBI chr14:41,357,587...41,371,374
Ensembl chr14:41,357,589...41,373,208
JBrowse link
G MMACHC metabolism of cobalamin associated C enables IEA UniProt GO_REF:0000043 NCBI chr 6:165,860,888...165,865,674
Ensembl chr 6:165,860,785...165,865,654
JBrowse link
G MMUT methylmalonyl-CoA mutase enables IEA
ISS
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000043 GO_REF:0000107 NCBI chr 7:43,597,313...43,624,603
Ensembl chr 7:43,597,292...43,624,609
JBrowse link
G MTR 5-methyltetrahydrofolate-homocysteine methyltransferase enables IEA UniProt GO_REF:0000104 NCBI chr14:54,546,978...54,652,780
Ensembl chr14:54,546,981...54,652,759
JBrowse link
G TCN1 transcobalamin 1 enables IEA
IBA
(PMID:21873635) InterPro
GO_Central
PMID:21873635 GO_REF:0000002 NCBI chr 2:11,633,377...11,646,261
Ensembl chr 2:11,633,387...11,647,728
JBrowse link
G TCN2 transcobalamin 2 enables IEA
ISO
IBA
(PMID:21873635) InterPro
RGD
GO_Central
PMID:11287214 PMID:21873635 GO_REF:0000002 RGD:1601485 NCBI chr14:47,496,245...47,515,966
Ensembl chr14:47,496,323...47,515,965
JBrowse link
D3 vitamins binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CYP2R1 cytochrome P450 family 2 subfamily R member 1 enables IEA Ensembl GO_REF:0000107 NCBI chr 2:44,375,432...44,394,122
Ensembl chr 2:44,375,520...44,396,367
JBrowse link
folic acid binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DHFR dihydrofolate reductase enables ISO (PMID:2303423) BHF-UCL PMID:2303423 NCBI chr 2:89,230,660...89,255,830 JBrowse link
G DMGDH dimethylglycine dehydrogenase ISO RGD PMID:6159630 PMID:6163778 RGD:1599787 RGD:7245485 NCBI chr 2:87,791,827...87,867,189
Ensembl chr 2:87,678,811...87,866,856
JBrowse link
G FOLR1 folate receptor alpha enables IEA
ISO
InterPro
RGD
PMID:10751329 GO_REF:0000002 RGD:1358236 NCBI chr 9:6,753,513...6,760,433
Ensembl chr 9:6,746,007...6,760,433
JBrowse link
G FOLR1 folate receptor alpha enables IEA InterPro
Ensembl
GO_REF:0000002 GO_REF:0000107 NCBI chr 9:6,746,014...6,750,431
Ensembl chr 9:6,746,007...6,760,433
JBrowse link
G FOLR2 folate receptor 2 (fetal) enables IEA Ensembl
InterPro
GO_REF:0000002 GO_REF:0000107 NCBI chr 9:6,785,308...6,790,466
Ensembl chr 9:6,785,303...6,790,465
JBrowse link
G FTCD formimidoyltransferase cyclodeaminase enables IEA UniProt GO_REF:0000043
G GNMT glycine N-methyltransferase enables IEA
ISO
UniProt
RGD
PMID:17158459 GO_REF:0000043 RGD:7242951 NCBI chr 7:38,038,359...38,041,218
Ensembl chr 7:38,038,358...38,041,218
JBrowse link
G IZUMO1R IZUMO1 receptor, JUNO NOT|enables ISO (MGI:5568137|PMID:24739963) UniProt PMID:24739963 MGI:5568137 NCBI chr 9:26,516,091...26,520,949
Ensembl chr 9:26,516,044...26,520,860
JBrowse link
G LOC100522040 formiminotransferase N-terminal subdomain-containing protein-like enables IEA InterPro GO_REF:0000002 NCBI chr15:103,361,449...103,543,157 JBrowse link
G LOC102167410 5-formyltetrahydrofolate cyclo-ligase enables ISO (PMID:19738041), (PMID:7766710) BHF-UCL PMID:7766710 PMID:19738041 NCBI chr 7:48,717,518...48,873,492 JBrowse link
G MTR 5-methyltetrahydrofolate-homocysteine methyltransferase ISO RGD PMID:11730351 RGD:1601423 NCBI chr14:54,546,978...54,652,780
Ensembl chr14:54,546,981...54,652,759
JBrowse link
G SARDH sarcosine dehydrogenase ISO RGD PMID:6163778 RGD:7245485 NCBI chr 1:273,230,357...273,295,170
Ensembl chr 1:273,228,838...273,295,104
JBrowse link
G SLC19A1 solute carrier family 19 member 1 enables IBA
ISO
(PMID:21873635) GO_Central
RGD
PMID:11600421 PMID:21873635 RGD:735239 NCBI chr13:207,986,094...208,007,855
Ensembl chr13:207,986,098...208,007,675
JBrowse link
G TYMS thymidylate synthetase ISO RGD PMID:7537805 RGD:2317419 NCBI chr 6:105,642,730...105,660,279
Ensembl chr 6:105,640,031...105,660,601
JBrowse link
G UROS uroporphyrinogen III synthase ISO RGD PMID:6466301 RGD:2303402 NCBI chr14:135,101,609...135,131,082
Ensembl chr14:135,055,538...135,131,074
JBrowse link
L-ascorbic acid binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DBH dopamine beta-hydroxylase enables IEA UniProt GO_REF:0000043 NCBI chr 1:273,204,407...273,225,562
Ensembl chr 1:273,204,400...273,225,558
JBrowse link
G EGLN1 egl-9 family hypoxia inducible factor 1 enables IEA InterPro GO_REF:0000002 NCBI chr14:59,113,527...59,168,421
Ensembl chr14:59,112,899...59,168,395
JBrowse link
G EGLN2 egl-9 family hypoxia inducible factor 2 enables IEA InterPro GO_REF:0000002 NCBI chr 6:49,002,266...49,010,042 JBrowse link
G EGLN2 egl-9 family hypoxia inducible factor 2 enables IEA InterPro GO_REF:0000002 Ensembl chr 6:49,000,966...49,010,042 JBrowse link
G EGLN3 egl-9 family hypoxia inducible factor 3 enables IEA InterPro GO_REF:0000002 NCBI chr 7:65,805,513...65,833,536
Ensembl chr 7:65,805,500...65,833,536
JBrowse link
G OGFOD1 2-oxoglutarate and iron dependent oxygenase domain containing 1 enables IEA InterPro GO_REF:0000002 NCBI chr 6:29,312,741...29,339,701
Ensembl chr 6:29,312,744...29,339,669
JBrowse link
G OGFOD2 2-oxoglutarate and iron dependent oxygenase domain containing 2 enables IEA InterPro GO_REF:0000002 NCBI chr14:29,890,003...29,895,405
Ensembl chr14:29,890,010...29,895,548
JBrowse link
G OGFOD3 2-oxoglutarate and iron dependent oxygenase domain containing 3 enables IEA InterPro GO_REF:0000002 NCBI chr12:677,146...688,195
Ensembl chr12:676,200...689,932
JBrowse link
G P3H1 prolyl 3-hydroxylase 1 enables IEA InterPro GO_REF:0000002 NCBI chr 6:168,668,275...168,687,832
Ensembl chr 6:168,534,655...168,690,095
JBrowse link
G P3H2 prolyl 3-hydroxylase 2 enables IEA InterPro GO_REF:0000002 NCBI chr13:127,414,955...127,572,165
Ensembl chr13:127,414,955...127,572,163
JBrowse link
G P3H3 prolyl 3-hydroxylase 3 enables IEA InterPro GO_REF:0000002 NCBI chr 5:63,871,506...63,885,294
Ensembl chr 5:63,871,508...63,884,835
JBrowse link
G P4HA1 prolyl 4-hydroxylase subunit alpha 1 enables IEA InterPro GO_REF:0000002 NCBI chr14:75,827,207...75,919,121
Ensembl chr14:75,825,140...75,918,917
JBrowse link
G P4HA2 prolyl 4-hydroxylase subunit alpha 2 enables IEA InterPro GO_REF:0000002 NCBI chr 2:134,502,210...134,595,444
Ensembl chr 2:134,502,210...134,595,430
JBrowse link
G P4HA3 prolyl 4-hydroxylase subunit alpha 3 enables IEA InterPro GO_REF:0000002 NCBI chr 9:8,627,365...8,681,804
Ensembl chr 9:8,627,412...8,667,774
JBrowse link
G P4HTM prolyl 4-hydroxylase, transmembrane enables IEA InterPro GO_REF:0000002 NCBI chr13:31,627,230...31,642,251
Ensembl chr13:31,627,240...31,651,361
JBrowse link
G PAM peptidylglycine alpha-amidating monooxygenase enables IEA UniProt GO_REF:0000043 NCBI chr 2:108,255,923...108,536,192
Ensembl chr 2:108,255,930...108,536,881
JBrowse link
G PHYH phytanoyl-CoA 2-hydroxylase enables IEA Ensembl GO_REF:0000107 NCBI chr10:48,404,298...48,423,978
Ensembl chr10:48,404,293...48,423,978
JBrowse link
G PLOD1 procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 enables ISO
IEA
RGD
InterPro
PMID:11714250 GO_REF:0000002 RGD:1599090 NCBI chr 6:71,987,938...72,019,712
Ensembl chr 6:71,988,459...72,021,804
JBrowse link
G PLOD2 procollagen-lysine,2-oxoglutarate 5-dioxygenase 2 enables IEA InterPro GO_REF:0000002 NCBI chr13:86,402,673...86,513,167
Ensembl chr13:86,401,244...86,513,105
JBrowse link
G PLOD3 procollagen-lysine,2-oxoglutarate 5-dioxygenase 3 enables IEA InterPro GO_REF:0000002 NCBI chr 3:8,911,787...8,919,525
Ensembl chr 3:8,911,787...8,919,516
JBrowse link
G SLC2A1 solute carrier family 2 member 1 enables IEA InterPro GO_REF:0000002 NCBI chr 6:168,535,398...168,561,170
Ensembl chr 6:168,534,655...168,690,095
JBrowse link
phosphopantetheine binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FASN fatty acid synthase enables IEA InterPro GO_REF:0000002 NCBI chr12:922,405...937,560
Ensembl chr12:920,507...937,559
JBrowse link
pyridoxal phosphate binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AADAT aminoadipate aminotransferase enables IEA InterPro GO_REF:0000002 NCBI chr14:19,768,816...19,792,254
Ensembl chr14:19,768,499...19,791,938
JBrowse link
G ABAT 4-aminobutyrate aminotransferase enables IBA
IEA
ISS
IDA
(PMID:21873635)
(PMID:6470007)
GO_Central
Ensembl
UniProt
InterPro
PMID:6470007 PMID:21873635 GO_REF:0000002 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:33,913,068...33,960,804
Ensembl chr 3:33,908,965...34,015,469
JBrowse link
G ACCS 1-aminocyclopropane-1-carboxylate synthase homolog (inactive) enables IEA InterPro GO_REF:0000002 NCBI chr 2:18,239,247...18,267,211
Ensembl chr 2:18,099,793...18,264,064
JBrowse link
G ACCSL 1-aminocyclopropane-1-carboxylate synthase homolog (inactive) like enables IEA InterPro GO_REF:0000002 NCBI chr 2:18,271,066...18,431,580
Ensembl chr 2:18,271,070...18,448,292
JBrowse link
G AGXT alanine--glyoxylate and serine--pyruvate aminotransferase enables IEA Ensembl GO_REF:0000107 NCBI chr15:139,720,648...139,730,737
Ensembl chr15:139,720,612...139,730,736
JBrowse link
G AGXT2 alanine--glyoxylate aminotransferase 2 enables IEA InterPro GO_REF:0000002 NCBI chr16:20,576,661...20,617,008
Ensembl chr16:20,576,660...20,617,017
JBrowse link
G ALAS1 aminolevulinate, delta-, synthase 1 pseudogene enables IEA UniProt GO_REF:0000104 NCBI chr13:34,333,263...34,347,435
Ensembl chr13:34,333,113...34,347,590
JBrowse link
G ALAS2 5'-aminolevulinate synthase 2 enables IEA UniProt GO_REF:0000104 NCBI chr  X:47,871,519...47,896,041
Ensembl chr  X:47,871,521...47,896,003
JBrowse link
G ALB albumin enables IEA
ISS
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr 8:69,643,427...69,663,152
Ensembl chr 8:69,531,487...69,718,304
JBrowse link
G CBS cystathionine beta-synthase enables ISO (PMID:18776696), (PMID:7929220) UniProt PMID:7929220 PMID:18776696 NCBI chr13:206,205,942...206,231,363 JBrowse link
G CSAD cysteine sulfinic acid decarboxylase enables IEA InterPro GO_REF:0000002 NCBI chr 5:18,379,340...18,410,446
Ensembl chr 5:18,379,340...18,410,212
JBrowse link
G CTH cystathionine gamma-lyase enables IEA
IBA
ISS
(PMID:21873635) Ensembl
GO_Central
InterPro
UniProt
PMID:21873635 GO_REF:0000002 GO_REF:0000024 GO_REF:0000107 NCBI chr 6:142,454,922...142,486,352
Ensembl chr 6:142,435,690...142,486,367
JBrowse link
G DDC dopa decarboxylase enables IEA
ISO
InterPro
RGD
PMID:8422386 GO_REF:0000002 RGD:4139896 NCBI chr 9:136,496,364...136,571,220
Ensembl chr 9:136,495,891...136,571,197
JBrowse link
G ETNPPL ethanolamine-phosphate phospho-lyase enables IEA InterPro GO_REF:0000002 NCBI chr 8:113,363,047...113,384,783
Ensembl chr 8:113,363,049...113,384,783
JBrowse link
G GAD1 glutamate decarboxylase 1 enables IEA
ISO
InterPro
RGD
PMID:1880546 GO_REF:0000002 RGD:6480263 NCBI chr15:76,991,863...77,034,819
Ensembl chr15:76,991,928...77,034,817
JBrowse link
G GAD2 glutamate decarboxylase 2 enables IEA
ISO
InterPro
RGD
PMID:1880546 GO_REF:0000002 RGD:6480263 NCBI chr10:49,316,682...49,391,013
Ensembl chr10:49,313,641...49,390,926
JBrowse link
G GADL1 glutamate decarboxylase like 1 enables IEA InterPro GO_REF:0000002 NCBI chr13:16,892,162...17,049,314
Ensembl chr13:16,876,166...17,101,433
JBrowse link
G GCAT glycine C-acetyltransferase enables IEA InterPro GO_REF:0000002 NCBI chr 5:10,027,133...10,038,494
Ensembl chr 5:10,011,009...10,038,433
JBrowse link
G GLDC glycine decarboxylase enables IBA
ISO
(PMID:21873635) GO_Central
RGD
PMID:6778858 PMID:21873635 RGD:1642728 NCBI chr 1:215,608,854...215,715,062
Ensembl chr 1:215,608,849...215,715,061
JBrowse link
G GOT1 glutamic-oxaloacetic transaminase 1 enables IEA InterPro GO_REF:0000002 NCBI chr14:110,608,422...110,635,825
Ensembl chr14:110,608,430...110,635,874
JBrowse link
G GOT1L1 glutamic-oxaloacetic transaminase 1 like 1 enables IEA InterPro GO_REF:0000002 NCBI chr15:48,500,156...48,506,992
Ensembl chr15:48,500,068...48,507,021
JBrowse link
G GOT2 glutamic-oxaloacetic transaminase 2 enables IEA
ISO
InterPro
RGD
PMID:12686151 PMID:14522984 GO_REF:0000002 RGD:1582383 RGD:2289396 NCBI chr 6:20,407,203...20,431,849
Ensembl chr 6:20,407,198...20,432,068
JBrowse link
G GPT glutamic--pyruvic transaminase enables IEA InterPro GO_REF:0000002 NCBI chr 4:297,747...302,498
Ensembl chr 4:297,748...320,056
JBrowse link
G GPT2 glutamic--pyruvic transaminase 2 enables IEA InterPro GO_REF:0000002 NCBI chr 6:37,625,428...37,669,695
Ensembl chr 6:37,625,105...37,669,669
JBrowse link
G HDC histidine decarboxylase enables IEA
ISO
InterPro
RGD
PMID:5898 PMID:4449071 PMID:7075603 PMID:9525922 PMID:12204113 More... GO_REF:0000002 RGD:2303726 RGD:2303727 RGD:2303728 RGD:2303733 RGD:2303734 RGD:2303735 NCBI chr 1:121,505,677...121,525,416
Ensembl chr 1:121,505,742...121,525,255
JBrowse link
G KYAT1 kynurenine aminotransferase 1 enables IEA InterPro GO_REF:0000002 NCBI chr 1:269,172,628...269,209,553 JBrowse link
G KYAT3 kynurenine aminotransferase 3 enables IEA InterPro GO_REF:0000002 NCBI chr 4:127,451,475...127,507,766
Ensembl chr 4:127,451,516...127,507,760
JBrowse link
G KYNU kynureninase enables IEA
ISO
UniProt
RGD
PMID:7451426 GO_REF:0000104 RGD:2290547 NCBI chr15:8,847,335...8,982,951
Ensembl chr15:8,850,665...8,982,945
JBrowse link
G LOC110261667 glutamate decarboxylase 1-like enables IEA InterPro GO_REF:0000002 NCBI chr 1:160,629,047...160,858,696 JBrowse link
G MOCOS molybdenum cofactor sulfurase enables IEA UniProt GO_REF:0000104 NCBI chr 6:119,945,076...120,018,332
Ensembl chr 6:119,945,076...120,018,120
JBrowse link
G MTARC1 mitochondrial amidoxime reducing component 1 enables IEA InterPro GO_REF:0000002 NCBI chr10:10,190,759...10,264,467 JBrowse link
G MTARC2 mitochondrial amidoxime reducing component 2 enables IEA InterPro GO_REF:0000002 NCBI chr10:10,156,732...10,194,371
Ensembl chr10:10,156,727...10,188,425
JBrowse link
G NFS1 NFS1 cysteine desulfurase enables IEA InterPro GO_REF:0000002 NCBI chr17:39,000,659...39,029,179
Ensembl chr17:39,000,642...39,029,186
JBrowse link
G OAT ornithine aminotransferase enables IEA
IBA
(PMID:21873635) InterPro
GO_Central
PMID:21873635 GO_REF:0000002 NCBI chr14:133,808,193...133,830,517 JBrowse link
G PDXDC1 pyridoxal dependent decarboxylase domain containing 1 enables IEA InterPro GO_REF:0000002 NCBI chr 3:7,465,274...7,520,681
Ensembl chr 3:7,407,930...7,520,679
JBrowse link
G PDXK pyridoxal kinase enables IEA Ensembl GO_REF:0000107 NCBI chr13:206,676,905...206,699,047
Ensembl chr13:206,676,730...206,703,327
JBrowse link
G PHYKPL 5-phosphohydroxy-L-lysine phospho-lyase enables IEA InterPro GO_REF:0000002 NCBI chr 2:80,142,273...80,188,753
Ensembl chr 2:80,137,982...80,191,957
JBrowse link
G PLPBP pyridoxal phosphate binding protein enables IBA
IEA
(PMID:21873635) GO_Central
UniProt
PMID:21873635 GO_REF:0000104 NCBI chr15:48,624,790...48,636,584
Ensembl chr15:48,624,837...48,636,589
JBrowse link
G PNPO pyridoxamine 5'-phosphate oxidase enables IEA Ensembl GO_REF:0000107 NCBI chr12:24,192,848...24,201,419
Ensembl chr12:24,192,897...24,201,414
JBrowse link
G PSAT1 phosphoserine aminotransferase 1 enables IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:231,142,673...231,172,364
Ensembl chr 1:231,142,625...231,172,363
JBrowse link
G PYGB glycogen phosphorylase B enables IEA
IBA
(PMID:21873635) InterPro
GO_Central
PMID:21873635 GO_REF:0000002 NCBI chr17:30,940,457...30,995,688
Ensembl chr17:30,940,452...30,995,695
JBrowse link
G PYGL glycogen phosphorylase L enables IEA
IBA
(PMID:21873635) InterPro
GO_Central
PMID:21873635 GO_REF:0000002 NCBI chr 1:180,645,849...180,704,124
Ensembl chr 1:180,620,314...180,719,979
JBrowse link
G PYGM glycogen phosphorylase, muscle associated enables IBA
ISO
IEA
(PMID:21873635) GO_Central
RGD
InterPro
PMID:11692172 PMID:21873635 GO_REF:0000002 RGD:1599897 NCBI chr 2:7,409,330...7,421,256
Ensembl chr 2:7,391,064...7,421,261
JBrowse link
G SDS serine dehydratase enables IEA Ensembl
InterPro
GO_REF:0000002 GO_REF:0000107 NCBI chr14:38,503,922...38,513,908
Ensembl chr14:38,503,930...38,513,880
JBrowse link
G SDSL serine dehydratase like enables IEA InterPro GO_REF:0000002 NCBI chr14:38,471,162...38,484,459
Ensembl chr14:38,471,165...38,484,155
JBrowse link
G SGPL1 sphingosine-1-phosphate lyase 1 enables IEA InterPro GO_REF:0000002 NCBI chr14:73,696,902...73,781,830
Ensembl chr14:73,723,800...73,781,830
JBrowse link
G SGSM2 small G protein signaling modulator 2 enables IEA InterPro GO_REF:0000002 NCBI chr12:48,386,915...48,407,917
Ensembl chr12:48,386,674...48,462,849
JBrowse link
G SGSM2 small G protein signaling modulator 2 enables IEA InterPro GO_REF:0000002 NCBI chr12:48,416,774...48,462,851
Ensembl chr12:48,386,674...48,462,849
JBrowse link
G SHMT1 serine hydroxymethyltransferase 1 enables IEA
ISO
IBA
(PMID:21873635) InterPro
RGD
Ensembl
GO_Central
PMID:3110140 PMID:21873635 GO_REF:0000002 GO_REF:0000107 RGD:2300383 NCBI chr12:60,414,421...60,435,451
Ensembl chr12:60,414,446...60,435,450
JBrowse link
G SHMT2 serine hydroxymethyltransferase 2 enables IBA
ISO
IEA
(PMID:21873635) GO_Central
RGD
InterPro
PMID:3110140 PMID:21873635 GO_REF:0000002 RGD:2300383 NCBI chr 5:22,535,780...22,540,322
Ensembl chr 5:22,532,894...22,540,321
JBrowse link
G SPTLC1 serine palmitoyltransferase long chain base subunit 1 enables IEA InterPro GO_REF:0000002 NCBI chr14:3,081,964...3,138,113
Ensembl chr14:3,081,969...3,138,103
JBrowse link
G SPTLC2 serine palmitoyltransferase long chain base subunit 2 enables IEA InterPro GO_REF:0000002 NCBI chr 7:100,545,360...100,638,973
Ensembl chr 7:100,544,478...100,638,907
JBrowse link
G SPTLC3 serine palmitoyltransferase long chain base subunit 3 enables IEA InterPro GO_REF:0000002 NCBI chr17:21,769,388...21,903,269
Ensembl chr17:21,769,484...21,903,269
JBrowse link
G TAT tyrosine aminotransferase enables IEA InterPro GO_REF:0000002 NCBI chr 6:14,571,311...14,583,203
Ensembl chr 6:14,570,587...14,583,177
JBrowse link
G THNSL2 threonine synthase like 2 enables IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 3:57,800,976...57,821,296
Ensembl chr 3:57,799,026...57,823,440
JBrowse link
retinal binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALDH1A2 aldehyde dehydrogenase 1 family member A2 ISO RGD PMID:8663198 RGD:724800 NCBI chr 1:113,932,722...114,037,059
Ensembl chr 1:113,715,620...114,037,249
JBrowse link
G RBP2 retinol binding protein 2 enables IEA UniProt GO_REF:0000043 NCBI chr13:80,321,024...80,346,032
Ensembl chr13:80,320,931...80,407,355
JBrowse link
G RBP3 retinol binding protein 3 enables IEA UniProt GO_REF:0000043 NCBI chr14:88,491,701...88,503,388
Ensembl chr14:88,490,013...88,501,663
JBrowse link
G RBP4 retinol binding protein 4 enables IEA UniProt GO_REF:0000043 NCBI chr14:105,037,360...105,044,552
Ensembl chr14:105,036,770...105,044,765
JBrowse link
G RHO rhodopsin ISO 9-cis retinaldehyde
9-cis and 11-cis retinal
RGD PMID:2525480 PMID:8814134 RGD:6893558 RGD:6893595 NCBI chr13:68,908,578...68,913,651
Ensembl chr13:68,908,578...68,913,651
JBrowse link
G RLBP1 retinaldehyde binding protein 1 enables IEA InterPro GO_REF:0000002 NCBI chr 7:54,783,965...54,800,008
Ensembl chr 7:54,771,978...54,889,014
JBrowse link
G STRA6 signaling receptor and transporter of retinol STRA6 enables IEA UniProt GO_REF:0000043 NCBI chr 7:59,317,930...59,347,274
Ensembl chr 7:59,318,010...59,347,267
JBrowse link
retinol binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADH4 alcohol dehydrogenase 4 (class II), pi polypeptide enables IEA Ensembl GO_REF:0000107 NCBI chr 8:121,225,485...121,259,262
NCBI chr  X:98,582,002...98,583,002
Ensembl chr 8:121,225,656...121,261,747
JBrowse link
G LRAT lecithin retinol acyltransferase ISO RGD PMID:2253789 PMID:8460936 PMID:9244401 RGD:1599829 RGD:1599831 RGD:1599832 NCBI chr 8:74,412,226...74,428,713
Ensembl chr 8:74,409,459...74,419,682
JBrowse link
G PAEP progestagen associated endometrial protein enables IEA UniProt GO_REF:0000043
G RBP1 retinol binding protein 1 ISO RGD PMID:12850148 PMID:16755609 PMID:19965581 RGD:6484697 RGD:6484735 RGD:6893656 NCBI chr13:80,380,958...80,407,328
Ensembl chr13:80,380,962...80,407,458
JBrowse link
G RBP2 retinol binding protein 2 enables IEA
ISO
UniProt
RGD
PMID:12850148 PMID:19965581 GO_REF:0000043 RGD:6484697 RGD:6893656 NCBI chr13:80,321,024...80,346,032
Ensembl chr13:80,320,931...80,407,355
JBrowse link
G RBP3 retinol binding protein 3 ISO RGD PMID:8282025 RGD:6893658 NCBI chr14:88,491,701...88,503,388
Ensembl chr14:88,490,013...88,501,663
JBrowse link
G RBP4 retinol binding protein 4 enables IDA
IEA
ISO
IBA
(PMID:9757135)
(PMID:21873635)
UniProt
Ensembl
RGD
GO_Central
PMID:9260907 PMID:9757135 PMID:21873635 GO_REF:0000107 RGD:6484695 NCBI chr14:105,037,360...105,044,552
Ensembl chr14:105,036,770...105,044,765
JBrowse link
G STRA6 signaling receptor and transporter of retinol STRA6 enables IEA UniProt GO_REF:0000043 NCBI chr 7:59,317,930...59,347,274
Ensembl chr 7:59,318,010...59,347,267
JBrowse link
thiamine binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TPK1 thiamin pyrophosphokinase 1 enables IEA UniProt
InterPro
GO_REF:0000002 GO_REF:0000104 NCBI chr 9:112,931,370...113,305,178
Ensembl chr 9:112,931,795...113,305,178
JBrowse link
thiamine pyrophosphate binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DHTKD1 dehydrogenase E1 and transketolase domain containing 1 enables IEA InterPro GO_REF:0000002 NCBI chr10:59,820,418...59,875,322
Ensembl chr10:59,790,073...59,875,245
JBrowse link
G HACL1 2-hydroxyacyl-CoA lyase 1 enables IEA
IBA
(PMID:21873635) Ensembl
InterPro
GO_Central
PMID:21873635 GO_REF:0000002 GO_REF:0000107 NCBI chr13:2,786,007...2,840,882
Ensembl chr13:2,766,361...2,840,902
JBrowse link
G ILVBL ilvB acetolactate synthase like enables IEA InterPro GO_REF:0000002 NCBI chr 2:62,435,368...62,447,030
Ensembl chr 2:62,435,155...62,451,700
JBrowse link
G OGDH oxoglutarate dehydrogenase enables IEA InterPro
Ensembl
GO_REF:0000002 GO_REF:0000107 NCBI chr18:50,609,415...50,684,990
Ensembl chr18:50,609,418...50,684,964
JBrowse link
G OGDHL oxoglutarate dehydrogenase L enables IEA InterPro GO_REF:0000002 NCBI chr14:90,207,439...90,235,500
Ensembl chr14:90,207,608...90,236,369
JBrowse link
G TKT transketolase ISO RGD PMID:16116031 RGD:1580394 NCBI chr13:35,348,921...35,377,518
Ensembl chr13:35,348,912...35,377,580
JBrowse link
G TKTL1 transketolase like 1 enables IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr  X:124,840,072...124,867,313
Ensembl chr  X:124,840,521...124,866,663
JBrowse link
G TKTL2 transketolase like 2 enables IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 8:52,325,782...52,328,286
Ensembl chr 8:52,326,545...52,329,300
JBrowse link
vitamin B6 binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SCLY selenocysteine lyase enables ISO PMID:20164179 CAFA PMID:20164179 RGD:12793035 NCBI chr15:137,637,076...137,674,726
Ensembl chr15:137,637,071...137,674,736
JBrowse link
vitamin D binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CALB1 calbindin 1 enables IEA UniProt GO_REF:0000043 NCBI chr 4:46,701,276...46,723,548
Ensembl chr 4:46,701,045...46,725,198
JBrowse link
G COMP cartilage oligomeric matrix protein ISO RGD PMID:12426368 RGD:1298777 NCBI chr 2:59,061,409...59,068,951
Ensembl chr 2:59,061,420...59,068,949
JBrowse link
G GC GC vitamin D binding protein enables IBA
ISO
(PMID:21873635) GO_Central
RGD
PMID:49052 PMID:21873635 RGD:2315532 NCBI chr 8:68,326,293...68,360,262
Ensembl chr 8:68,326,301...68,360,262
JBrowse link
G S100G S100 calcium binding protein G enables IEA UniProt GO_REF:0000043 NCBI chr  X:13,107,611...13,114,213
Ensembl chr  X:13,107,402...13,114,213
JBrowse link
G VDR vitamin D receptor ISO RGD PMID:2829212 RGD:729973 NCBI chr 5:78,205,807...78,266,505
Ensembl chr 5:78,205,810...78,267,321
JBrowse link
vitamin E binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AFM afamin enables IEA
IBA
(PMID:21873635) Ensembl
GO_Central
PMID:21873635 GO_REF:0000107 NCBI chr 8:69,706,823...69,728,269
Ensembl chr 8:69,706,890...69,728,267
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  molecular_function 17463
    binding 15381
      small molecule binding 2269
        vitamin binding 139
          L-ascorbic acid binding 21
          biotin binding 4
          cobalamin binding 9
          folic acid binding 15
          phosphopantetheine binding 1
          retinal binding + 13
          retinol binding + 10
          thiamine binding 1
          thiamine pyrophosphate binding 8
          vitamin B6 binding + 56
          vitamin D binding + 6
          vitamin E binding 1
paths to the root