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ONTOLOGY REPORT - ANNOTATIONS


Term:vitamin binding
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Accession:GO:0019842 term browser browse the term
Definition:Binding to a vitamin, one of a number of unrelated organic substances that occur in many foods in small amounts and that are necessary in trace amounts for the normal metabolic functioning of the body.



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vitamin binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GGCX gamma-glutamyl carboxylase enables ISO
IEA
IBA
RGD
TreeGrafter
GO_Central
PMID:12754193 GO_REF:0000033 GO_REF:0000118 RGD:1582507 NCBI chr 3:59,202,363...59,219,807
Ensembl chr 3:59,202,429...59,218,145
JBrowse link
G PANK3 pantothenate kinase 3 enables IEA Ensembl GO_REF:0000107 NCBI chr16:55,313,333...55,340,070
Ensembl chr16:55,313,324...55,340,065
JBrowse link
G PYGL glycogen phosphorylase L enables IEA Ensembl GO_REF:0000107 NCBI chr 1:180,645,849...180,704,124
Ensembl chr 1:180,620,314...180,719,979
JBrowse link
G TTPA alpha tocopherol transfer protein ISO RGD PMID:8349655 RGD:730016 NCBI chr 4:70,960,580...70,980,883
Ensembl chr 4:70,961,465...70,980,876
JBrowse link
11-cis retinal binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCA4 ATP binding cassette subfamily A member 4 enables IEA Ensembl GO_REF:0000107 NCBI chr 4:123,202,720...123,333,044
Ensembl chr 4:123,202,753...123,331,144
JBrowse link
G LOC100517560 cytochrome P450 27C1 enables ISO (PMID:27059013) UniProt PMID:27059013 NCBI chr15:25,244,585...25,259,545 JBrowse link
G OPN4 opsin 4 enables IEA Ensembl GO_REF:0000107 NCBI chr14:87,645,563...87,660,820
Ensembl chr14:87,647,238...87,658,815
JBrowse link
G OPN5 opsin 5 enables IEA Ensembl GO_REF:0000107 NCBI chr 7:42,476,125...42,507,181
Ensembl chr 7:42,476,125...42,527,121
JBrowse link
G RHO rhodopsin enables ISS UniProt GO_REF:0000024 NCBI chr13:68,908,578...68,913,651
Ensembl chr13:68,908,578...68,913,651
JBrowse link
G RLBP1 retinaldehyde binding protein 1 enables IEA Ensembl GO_REF:0000107 NCBI chr 7:54,783,965...54,800,008
Ensembl chr 7:54,776,113...54,889,014
JBrowse link
all-trans retinal binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCA4 ATP binding cassette subfamily A member 4 enables IEA Ensembl GO_REF:0000107 NCBI chr 4:123,202,720...123,333,044
Ensembl chr 4:123,202,753...123,331,144
JBrowse link
G ADH4 alcohol dehydrogenase 4 (class II), pi polypeptide enables IEA Ensembl GO_REF:0000107 NCBI chr 8:121,225,485...121,259,262
NCBI chr  X:98,582,002...98,583,002
Ensembl chr 8:121,225,656...121,261,746
JBrowse link
G CYP2W1 cytochrome P450 family 2 subfamily W member 1 enables IEA Ensembl GO_REF:0000107 NCBI chr 3:641,997...649,313
Ensembl chr 3:642,471...648,909
JBrowse link
G LOC100517560 cytochrome P450 27C1 enables ISO (PMID:27059013) UniProt PMID:27059013 NCBI chr15:25,244,585...25,259,545 JBrowse link
all-trans-retinol binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CYP2W1 cytochrome P450 family 2 subfamily W member 1 enables IEA Ensembl GO_REF:0000107 NCBI chr 3:641,997...649,313
Ensembl chr 3:642,471...648,909
JBrowse link
G LOC100517560 cytochrome P450 27C1 enables ISO (PMID:27059013) UniProt PMID:27059013 NCBI chr15:25,244,585...25,259,545 JBrowse link
G NMNAT3 nicotinamide nucleotide adenylyltransferase 3 enables IEA TreeGrafter GO_REF:0000118 NCBI chr13:80,431,405...80,556,808
Ensembl chr13:80,429,639...80,556,790
JBrowse link
G RBP1 retinol binding protein 1 enables IBA
IEA
GO_Central
TreeGrafter
GO_REF:0000033 GO_REF:0000118 NCBI chr13:80,380,958...80,407,328
Ensembl chr13:80,380,962...80,407,458
JBrowse link
biotin binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACACA acetyl-CoA carboxylase alpha ISO RGD PMID:12949377 RGD:1601566 NCBI chr12:38,580,916...38,875,067
Ensembl chr12:38,581,457...38,824,712
JBrowse link
G ACACB acetyl-CoA carboxylase beta ISO RGD PMID:12949377 RGD:1601566 NCBI chr14:41,621,574...41,739,916
Ensembl chr14:41,621,574...41,739,916
JBrowse link
G HLCS holocarboxylase synthetase enables IEA Ensembl GO_REF:0000107 NCBI chr13:200,406,395...200,618,967
Ensembl chr13:200,405,064...200,607,748
JBrowse link
G PC pyruvate carboxylase ISO RGD PMID:12949377 RGD:1601566 NCBI chr 2:5,566,608...5,587,797
Ensembl chr 2:5,518,517...5,587,797
JBrowse link
calcidiol binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GC GC vitamin D binding protein enables IEA Ensembl GO_REF:0000107 NCBI chr 8:68,326,293...68,360,262
Ensembl chr 8:68,326,299...68,360,262
JBrowse link
calcitriol binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G VDR vitamin D receptor enables ISO (PMID:28698609)
(PMID:10678179), (PMID:12016314)
RGD
UniProt
PMID:8179318 PMID:10678179 PMID:12016314 PMID:28698609 RGD:8158087 NCBI chr 5:78,205,807...78,266,505
Ensembl chr 5:78,205,810...78,266,475
JBrowse link
cobalamin binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CBLIF cobalamin binding intrinsic factor enables ISO
IEA
RGD
InterPro
Ensembl
TreeGrafter
PMID:7150665 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 RGD:1624372 NCBI chr 2:11,655,726...11,674,357
Ensembl chr 2:11,655,767...11,674,302
JBrowse link
G CD320 CD320 molecule enables IEA Ensembl GO_REF:0000107 NCBI chr 2:70,961,897...70,970,289
Ensembl chr 2:70,965,672...70,970,288
JBrowse link
G CUBN cubilin enables IEA UniProt GO_REF:0000043 NCBI chr10:43,102,931...43,414,692
Ensembl chr10:43,102,946...43,414,758
JBrowse link
G LMBRD1 LMBR1 domain containing 1 enables IEA UniProt GO_REF:0000043 NCBI chr 1:49,869,184...49,977,984
Ensembl chr 1:49,868,613...49,977,965
JBrowse link
G MMAB metabolism of cobalamin associated B enables IEA Ensembl GO_REF:0000107 NCBI chr14:41,357,587...41,371,374
Ensembl chr14:41,357,637...41,373,205
JBrowse link
G MMACHC metabolism of cobalamin associated C enables IEA UniProt GO_REF:0000043 NCBI chr 6:165,860,888...165,865,674
Ensembl chr 6:165,860,785...165,865,642
JBrowse link
G MMUT methylmalonyl-CoA mutase enables IEA
IBA
ISS
InterPro
TreeGrafter
GO_Central
Ensembl
UniProt
GO_REF:0000002 GO_REF:0000024 GO_REF:0000033 GO_REF:0000043 GO_REF:0000107 GO_REF:0000118 NCBI chr 7:43,597,313...43,624,603
Ensembl chr 7:43,597,246...43,624,671
JBrowse link
G MTR 5-methyltetrahydrofolate-homocysteine methyltransferase enables IEA InterPro
UniProt
GO_REF:0000002 GO_REF:0000043 GO_REF:0000104 NCBI chr14:54,546,978...54,652,780
Ensembl chr14:54,546,978...54,652,763
JBrowse link
G TCN1 transcobalamin 1 enables IEA
IBA
InterPro
TreeGrafter
GO_Central
GO_REF:0000002 GO_REF:0000033 GO_REF:0000118 NCBI chr 2:11,633,377...11,646,261
Ensembl chr 2:11,633,387...11,646,251
JBrowse link
G TCN2 transcobalamin 2 enables ISO
IBA
IEA
RGD
GO_Central
TreeGrafter
Ensembl
InterPro
PMID:11287214 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 RGD:1601485 NCBI chr14:47,496,245...47,515,966
Ensembl chr14:47,502,715...47,515,965
JBrowse link
D3 vitamins binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CYP2R1 cytochrome P450 family 2 subfamily R member 1 enables IEA Ensembl GO_REF:0000107 NCBI chr 2:44,375,432...44,394,122
Ensembl chr 2:44,375,520...44,396,334
JBrowse link
folic acid binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DHFR dihydrofolate reductase enables ISO (PMID:2303423) BHF-UCL PMID:2303423 NCBI chr 2:89,230,660...89,255,830 JBrowse link
G DMGDH dimethylglycine dehydrogenase ISO RGD PMID:6159630 PMID:6163778 RGD:1599787 RGD:7245485 NCBI chr 2:87,791,827...87,867,189
Ensembl chr 2:87,791,943...87,866,679
JBrowse link
G FOLR1 folate receptor alpha enables ISO (PMID:10787414), (PMID:14722620), (PMID:19116913), (PMID:23851396), (PMID:2527252) UniProt PMID:2527252 PMID:10787414 PMID:14722620 PMID:19116913 PMID:23851396 NCBI chr 9:6,753,513...6,760,433
Ensembl chr 9:6,757,040...6,760,402
JBrowse link
G FOLR2 folate receptor 2 (fetal) enables ISO (PMID:19116913), (PMID:25015955), (PMID:4066659) BHF-UCL PMID:4066659 PMID:19116913 PMID:25015955 NCBI chr 9:6,785,308...6,790,466
Ensembl chr 9:6,785,303...6,790,465
JBrowse link
G FTCD formimidoyltransferase cyclodeaminase enables IEA InterPro
UniProt
GO_REF:0000002 GO_REF:0000043
G GNMT glycine N-methyltransferase enables ISO
IEA
RGD
UniProt
PMID:17158459 GO_REF:0000043 RGD:7242951 NCBI chr 7:38,038,359...38,041,218
Ensembl chr 7:38,038,358...38,041,217
JBrowse link
G IZUMO1R IZUMO1 receptor, JUNO NOT|enables ISO (MGI:5568137|PMID:24739963) UniProt PMID:24739963 MGI:5568137 NCBI chr 9:26,516,091...26,520,949
Ensembl chr 9:26,517,292...26,520,860
JBrowse link
G LOC100522040 formiminotransferase N-terminal subdomain-containing protein-like enables IEA InterPro GO_REF:0000002 NCBI chr15:103,361,449...103,543,157 JBrowse link
G LOC102167410 5-formyltetrahydrofolate cyclo-ligase enables IEA Ensembl GO_REF:0000107 NCBI chr 7:48,717,518...48,873,492
Ensembl chr 7:48,717,851...48,873,455
JBrowse link
G MTR 5-methyltetrahydrofolate-homocysteine methyltransferase ISO RGD PMID:11730351 RGD:1601423 NCBI chr14:54,546,978...54,652,780
Ensembl chr14:54,546,978...54,652,763
JBrowse link
G SARDH sarcosine dehydrogenase ISO RGD PMID:6163778 RGD:7245485 NCBI chr 1:273,230,357...273,295,170
Ensembl chr 1:273,230,375...273,294,621
JBrowse link
G SLC19A1 solute carrier family 19 member 1 enables ISO
IEA
IBA
RGD
TreeGrafter
GO_Central
UniProt
PMID:11600421 GO_REF:0000033 GO_REF:0000043 GO_REF:0000104 GO_REF:0000118 RGD:735239 NCBI chr13:207,986,094...208,007,855
Ensembl chr13:207,986,098...208,007,675
JBrowse link
G SLC46A1 solute carrier family 46 member 1 enables IEA UniProt GO_REF:0000043 NCBI chr12:44,677,499...44,686,277
Ensembl chr12:44,677,502...44,686,250
JBrowse link
G TYMS thymidylate synthetase ISO RGD PMID:7537805 RGD:2317419 NCBI chr 6:105,642,730...105,660,279
Ensembl chr 6:105,642,381...105,660,578
JBrowse link
G UROS uroporphyrinogen III synthase ISO RGD PMID:6466301 RGD:2303402 NCBI chr14:135,101,609...135,131,082
Ensembl chr14:135,101,610...135,131,072
JBrowse link
L-ascorbic acid binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DBH dopamine beta-hydroxylase enables IEA UniProt GO_REF:0000043 NCBI chr 1:273,204,407...273,225,562
Ensembl chr 1:273,204,175...273,225,552
JBrowse link
G EGLN1 egl-9 family hypoxia inducible factor 1 enables IEA InterPro GO_REF:0000002 NCBI chr14:59,113,527...59,168,421
Ensembl chr14:59,113,844...59,168,395
JBrowse link
G EGLN2 egl-9 family hypoxia inducible factor 2 enables IEA InterPro GO_REF:0000002 NCBI chr 6:49,002,266...49,010,042 JBrowse link
G EGLN3 egl-9 family hypoxia inducible factor 3 enables IEA InterPro GO_REF:0000002 NCBI chr 7:65,805,513...65,833,536
Ensembl chr 7:65,805,522...65,833,529
JBrowse link
G OGFOD1 2-oxoglutarate and iron dependent oxygenase domain containing 1 enables IEA InterPro
UniProt
GO_REF:0000002 GO_REF:0000043 NCBI chr 6:29,312,741...29,339,701
Ensembl chr 6:29,312,750...29,339,711
JBrowse link
G OGFOD2 2-oxoglutarate and iron dependent oxygenase domain containing 2 enables IEA InterPro GO_REF:0000002 NCBI chr14:29,890,003...29,895,405
Ensembl chr14:29,890,010...29,895,405
JBrowse link
G OGFOD3 2-oxoglutarate and iron dependent oxygenase domain containing 3 enables IEA InterPro GO_REF:0000002 NCBI chr12:677,146...688,195
Ensembl chr12:677,179...689,926
JBrowse link
G P3H1 prolyl 3-hydroxylase 1 enables IEA InterPro GO_REF:0000002 NCBI chr 6:168,668,275...168,687,832
Ensembl chr 6:168,668,311...168,687,829
JBrowse link
G P3H2 prolyl 3-hydroxylase 2 enables IEA InterPro GO_REF:0000002 NCBI chr13:127,414,955...127,572,165
Ensembl chr13:127,414,958...127,572,163
JBrowse link
G P3H3 prolyl 3-hydroxylase 3 enables IEA InterPro GO_REF:0000002 NCBI chr 5:63,871,506...63,885,294
Ensembl chr 5:63,871,508...63,885,034
JBrowse link
G P4HA1 prolyl 4-hydroxylase subunit alpha 1 enables IEA InterPro GO_REF:0000002 NCBI chr14:75,827,207...75,919,121
Ensembl chr14:75,825,148...75,919,016
JBrowse link
G P4HA2 prolyl 4-hydroxylase subunit alpha 2 enables IEA InterPro GO_REF:0000002 NCBI chr 2:134,502,210...134,595,444
Ensembl chr 2:134,502,212...134,595,430
JBrowse link
G P4HA3 prolyl 4-hydroxylase subunit alpha 3 enables IEA InterPro GO_REF:0000002 NCBI chr 9:8,627,365...8,681,804
Ensembl chr 9:8,627,413...8,667,772
JBrowse link
G P4HTM prolyl 4-hydroxylase, transmembrane enables IEA InterPro GO_REF:0000002 NCBI chr13:31,627,230...31,642,251
Ensembl chr13:31,627,225...31,642,399
JBrowse link
G PAM peptidylglycine alpha-amidating monooxygenase enables IEA UniProt GO_REF:0000043 NCBI chr 2:108,255,923...108,536,192
Ensembl chr 2:108,255,930...108,536,880
JBrowse link
G PHYH phytanoyl-CoA 2-hydroxylase enables IEA Ensembl GO_REF:0000107 NCBI chr10:48,404,298...48,423,978
Ensembl chr10:48,404,293...48,423,973
JBrowse link
G PLOD1 procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 enables ISO
IEA
RGD
UniProt
InterPro
PMID:11714250 GO_REF:0000002 GO_REF:0000043 RGD:1599090 NCBI chr 6:71,987,938...72,019,712
Ensembl chr 6:71,988,459...72,021,804
JBrowse link
G PLOD2 procollagen-lysine,2-oxoglutarate 5-dioxygenase 2 enables IEA InterPro
UniProt
GO_REF:0000002 GO_REF:0000043 NCBI chr13:86,402,673...86,513,167
Ensembl chr13:86,401,244...86,513,105
JBrowse link
G PLOD3 procollagen-lysine,2-oxoglutarate 5-dioxygenase 3 enables IEA InterPro
UniProt
GO_REF:0000002 GO_REF:0000043 NCBI chr 3:8,911,787...8,919,525
Ensembl chr 3:8,911,791...8,919,516
JBrowse link
G SLC2A1 solute carrier family 2 member 1 enables IEA InterPro GO_REF:0000002 NCBI chr 6:168,535,398...168,561,170
Ensembl chr 6:168,535,440...168,560,867
JBrowse link
phosphopantetheine binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FASN fatty acid synthase enables IEA InterPro GO_REF:0000002 NCBI chr12:922,405...937,560
Ensembl chr12:920,509...937,561
JBrowse link
pyridoxal phosphate binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AADAT aminoadipate aminotransferase enables IEA InterPro GO_REF:0000002 NCBI chr14:19,768,816...19,792,254
Ensembl chr14:19,768,776...19,792,256
JBrowse link
G ABAT 4-aminobutyrate aminotransferase enables IEA
IBA
IDA
ISS
(PMID:6470007) InterPro
GO_Central
TreeGrafter
Ensembl
UniProt
PMID:6470007 GO_REF:0000002 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 3:33,913,068...33,960,804
Ensembl chr 3:33,908,970...34,015,474
JBrowse link
G ACCS 1-aminocyclopropane-1-carboxylate synthase homolog (inactive) enables IEA InterPro GO_REF:0000002 NCBI chr 2:18,239,247...18,267,211
Ensembl chr 2:18,248,521...18,264,064
JBrowse link
G ACCSL 1-aminocyclopropane-1-carboxylate synthase homolog (inactive) like enables IEA InterPro GO_REF:0000002 NCBI chr 2:18,271,066...18,431,580
Ensembl chr 2:18,271,070...18,281,431
JBrowse link
G AGXT alanine--glyoxylate aminotransferase enables IEA Ensembl GO_REF:0000107 NCBI chr15:139,720,648...139,730,737
Ensembl chr15:139,720,612...139,730,736
JBrowse link
G AGXT2 alanine--glyoxylate aminotransferase 2 enables IEA InterPro GO_REF:0000002 NCBI chr16:20,576,661...20,617,008
Ensembl chr16:20,576,659...20,617,011
JBrowse link
G ALAS1 aminolevulinate, delta-, synthase 1 pseudogene enables IEA InterPro
UniProt
GO_REF:0000002 GO_REF:0000104 NCBI chr13:34,333,263...34,347,435
Ensembl chr13:34,333,113...34,347,589
JBrowse link
G ALAS2 5'-aminolevulinate synthase 2 enables IEA InterPro
UniProt
GO_REF:0000002 GO_REF:0000104 NCBI chr  X:47,871,519...47,896,041
Ensembl chr  X:47,871,523...47,896,000
JBrowse link
G ALB albumin enables IEA
ISS
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr 8:69,643,427...69,663,152
Ensembl chr 8:69,531,487...69,721,696
JBrowse link
G ALKBH3 alkB homolog 3, alpha-ketoglutarate dependent dioxygenase enables IEA InterPro GO_REF:0000002 NCBI chr 2:18,408,987...18,448,285
Ensembl chr 2:18,408,987...18,446,056
JBrowse link
G CBS cystathionine beta-synthase enables IEA Ensembl GO_REF:0000107 NCBI chr13:206,205,942...206,231,363
Ensembl chr13:206,205,946...206,230,248
JBrowse link
G CSAD cysteine sulfinic acid decarboxylase enables IEA InterPro GO_REF:0000002 NCBI chr 5:18,379,340...18,410,446
Ensembl chr 5:18,379,288...18,410,646
JBrowse link
G CTH cystathionine gamma-lyase enables IEA
IBA
ISS
InterPro
TreeGrafter
GO_Central
Ensembl
UniProt
GO_REF:0000002 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 6:142,454,922...142,486,352
Ensembl chr 6:142,454,914...142,486,367
JBrowse link
G DDC dopa decarboxylase enables ISO
IEA
RGD
InterPro
PMID:8422386 GO_REF:0000002 RGD:4139896 NCBI chr 9:136,496,364...136,571,220
Ensembl chr 9:136,496,365...136,571,212
JBrowse link
G ETNPPL ethanolamine-phosphate phospho-lyase enables IEA InterPro GO_REF:0000002 NCBI chr 8:113,363,047...113,384,783
Ensembl chr 8:113,363,042...113,384,774
JBrowse link
G FIGNL1 fidgetin like 1 enables IEA InterPro GO_REF:0000002 NCBI chr 9:136,484,217...136,488,262
Ensembl chr 9:136,484,216...136,488,250
JBrowse link
G GAD1 glutamate decarboxylase 1 enables ISO
IEA
RGD
InterPro
PMID:1880546 GO_REF:0000002 RGD:6480263 NCBI chr15:76,991,863...77,034,819
Ensembl chr15:76,991,928...77,034,812
JBrowse link
G GAD2 glutamate decarboxylase 2 enables ISO
IEA
RGD
InterPro
PMID:1880546 GO_REF:0000002 RGD:6480263 NCBI chr10:49,316,682...49,391,013
Ensembl chr10:49,313,647...49,390,926
JBrowse link
G GADL1 glutamate decarboxylase like 1 enables IEA InterPro GO_REF:0000002 NCBI chr13:16,892,162...17,049,314
Ensembl chr13:16,892,163...17,049,305
JBrowse link
G GCAT glycine C-acetyltransferase enables IEA InterPro GO_REF:0000002 NCBI chr 5:10,027,133...10,038,494
Ensembl chr 5:10,027,044...10,038,433
JBrowse link
G GLDC glycine decarboxylase enables ISO
IBA
IEA
RGD
GO_Central
TreeGrafter
PMID:6778858 GO_REF:0000033 GO_REF:0000118 RGD:1642728 NCBI chr 1:215,608,854...215,715,062
Ensembl chr 1:215,608,849...215,715,059
JBrowse link
G GOT1 glutamic-oxaloacetic transaminase 1 enables IEA InterPro GO_REF:0000002 NCBI chr14:110,608,422...110,635,825
Ensembl chr14:110,608,430...110,635,874
JBrowse link
G GOT1L1 glutamic-oxaloacetic transaminase 1 like 1 enables IEA InterPro GO_REF:0000002 NCBI chr15:48,500,156...48,506,992
Ensembl chr15:48,499,964...48,507,010
JBrowse link
G GOT2 glutamic-oxaloacetic transaminase 2 enables ISO
IEA
RGD
TreeGrafter
InterPro
PMID:12686151 PMID:14522984 GO_REF:0000002 GO_REF:0000118 RGD:1582383 RGD:2289396 NCBI chr 6:20,407,203...20,431,849
Ensembl chr 6:20,407,200...20,432,067
JBrowse link
G GPT glutamic--pyruvic transaminase enables IEA InterPro GO_REF:0000002 NCBI chr 4:297,747...302,498
Ensembl chr 4:297,748...320,056
JBrowse link
G GPT2 glutamic--pyruvic transaminase 2 enables IEA InterPro GO_REF:0000002 NCBI chr 6:37,625,428...37,669,695
Ensembl chr 6:37,625,436...37,669,663
JBrowse link
G HDC histidine decarboxylase enables ISO
IEA
RGD
InterPro
PMID:5898 PMID:4449071 PMID:7075603 PMID:9525922 PMID:12204113 More... GO_REF:0000002 RGD:2303726 RGD:2303727 RGD:2303728 RGD:2303733 RGD:2303734 RGD:2303735 NCBI chr 1:121,505,677...121,525,416
Ensembl chr 1:121,505,751...121,525,252
JBrowse link
G KYAT1 kynurenine aminotransferase 1 enables IEA InterPro GO_REF:0000002 NCBI chr 1:269,172,628...269,209,553
Ensembl chr 1:269,172,628...269,209,478
JBrowse link
G KYAT3 kynurenine aminotransferase 3 enables IEA InterPro GO_REF:0000002 NCBI chr 4:127,451,475...127,507,766
Ensembl chr 4:127,451,516...127,507,759
JBrowse link
G KYNU kynureninase enables ISO
IEA
RGD
UniProt
InterPro
PMID:7451426 GO_REF:0000002 GO_REF:0000104 RGD:2290547 NCBI chr15:8,847,335...8,982,951
Ensembl chr15:8,850,544...8,982,891
JBrowse link
G LOC100520401 CDGSH iron-sulfur domain-containing protein 1 enables ISO (PMID:36194135) UniProt PMID:36194135 NCBI chr11:66,967,238...66,967,696 JBrowse link
G LOC110261667 glutamate decarboxylase 1-like enables IEA InterPro GO_REF:0000002 NCBI chr 1:160,629,047...160,858,696 JBrowse link
G MOCOS molybdenum cofactor sulfurase enables IEA InterPro
UniProt
GO_REF:0000002 GO_REF:0000104 NCBI chr 6:119,945,076...120,018,332
Ensembl chr 6:119,945,052...120,018,097
JBrowse link
G MTARC1 mitochondrial amidoxime reducing component 1 enables IEA InterPro GO_REF:0000002 NCBI chr10:10,190,759...10,264,467
Ensembl chr10:10,190,835...10,216,175
JBrowse link
G MTARC2 mitochondrial amidoxime reducing component 2 enables IEA InterPro GO_REF:0000002 NCBI chr10:10,156,732...10,194,371
Ensembl chr10:10,156,728...10,189,924
JBrowse link
G NFS1 NFS1 cysteine desulfurase enables IEA InterPro GO_REF:0000002 NCBI chr17:39,000,659...39,029,179
Ensembl chr17:39,000,644...39,029,185
JBrowse link
G OAT ornithine aminotransferase enables IEA
IBA
InterPro
TreeGrafter
GO_Central
GO_REF:0000002 GO_REF:0000033 GO_REF:0000118 NCBI chr14:133,808,193...133,830,517 JBrowse link
G PDXDC1 pyridoxal dependent decarboxylase domain containing 1 enables IEA InterPro GO_REF:0000002 NCBI chr 3:7,465,274...7,520,681
Ensembl chr 3:7,407,731...7,520,679
JBrowse link
G PDXK pyridoxal kinase enables IEA Ensembl GO_REF:0000107 NCBI chr13:206,676,905...206,699,047
Ensembl chr13:206,676,730...206,703,326
JBrowse link
G PHYKPL 5-phosphohydroxy-L-lysine phospho-lyase enables IEA InterPro GO_REF:0000002 NCBI chr 2:80,142,273...80,188,753
Ensembl chr 2:80,142,033...80,191,957
JBrowse link
G PLPBP pyridoxal phosphate binding protein enables IEA
IBA
UniProt
TreeGrafter
GO_Central
InterPro
GO_REF:0000002 GO_REF:0000033 GO_REF:0000104 GO_REF:0000118 NCBI chr15:48,624,790...48,636,584
Ensembl chr15:48,624,837...48,636,589
JBrowse link
G PNPO pyridoxamine 5'-phosphate oxidase enables IEA Ensembl GO_REF:0000107 NCBI chr12:24,192,848...24,201,419
Ensembl chr12:24,192,897...24,201,411
JBrowse link
G PPP1R16A protein phosphatase 1 regulatory subunit 16A enables IEA InterPro GO_REF:0000002 NCBI chr 4:302,621...320,048
Ensembl chr 4:297,748...320,056
JBrowse link
G PSAT1 phosphoserine aminotransferase 1 enables IBA
IEA
GO_Central
TreeGrafter
GO_REF:0000033 GO_REF:0000118 NCBI chr 1:231,142,673...231,172,364
Ensembl chr 1:231,142,625...231,172,360
JBrowse link
G PYGB glycogen phosphorylase B enables IEA
IBA
InterPro
TreeGrafter
GO_Central
GO_REF:0000002 GO_REF:0000033 GO_REF:0000118 NCBI chr17:30,940,457...30,995,688
Ensembl chr17:30,940,452...30,995,691
JBrowse link
G PYGL glycogen phosphorylase L enables IEA
IBA
InterPro
TreeGrafter
GO_Central
GO_REF:0000002 GO_REF:0000033 GO_REF:0000118 NCBI chr 1:180,645,849...180,704,124
Ensembl chr 1:180,620,314...180,719,979
JBrowse link
G PYGM glycogen phosphorylase, muscle associated enables ISO
IEA
RGD
TreeGrafter
InterPro
PMID:11692172 GO_REF:0000002 GO_REF:0000118 RGD:1599897 NCBI chr 2:7,409,330...7,421,256
Ensembl chr 2:7,409,116...7,421,254
JBrowse link
G SDS serine dehydratase enables IEA InterPro
Ensembl
GO_REF:0000002 GO_REF:0000107 NCBI chr14:38,503,922...38,513,908
Ensembl chr14:38,503,933...38,513,878
JBrowse link
G SDSL serine dehydratase like enables IEA InterPro GO_REF:0000002 NCBI chr14:38,471,162...38,484,459
Ensembl chr14:38,471,165...38,484,155
JBrowse link
G SGPL1 sphingosine-1-phosphate lyase 1 enables IEA InterPro GO_REF:0000002 NCBI chr14:73,696,902...73,781,830
Ensembl chr14:73,724,100...73,781,800
JBrowse link
G SGSM2 small G protein signaling modulator 2 enables IEA InterPro
TreeGrafter
Ensembl
GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr12:48,386,915...48,407,917
Ensembl chr12:48,386,881...48,408,039
JBrowse link
G SGSM2 small G protein signaling modulator 2 enables IEA InterPro
TreeGrafter
GO_REF:0000002 GO_REF:0000118 NCBI chr12:48,416,774...48,462,851
Ensembl chr12:48,416,790...48,462,846
JBrowse link
G SHMT1 serine hydroxymethyltransferase 1 enables ISO
IEA
IBA
RGD
TreeGrafter
GO_Central
Ensembl
InterPro
PMID:3110140 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 RGD:2300383 NCBI chr12:60,414,421...60,435,451
Ensembl chr12:60,416,463...60,435,450
JBrowse link
G SHMT2 serine hydroxymethyltransferase 2 enables ISO
IBA
IEA
RGD
GO_Central
TreeGrafter
Ensembl
InterPro
PMID:3110140 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 RGD:2300383 NCBI chr 5:22,535,780...22,540,322
Ensembl chr 5:22,532,894...22,540,319
JBrowse link
G SPTLC1 serine palmitoyltransferase long chain base subunit 1 enables IEA InterPro GO_REF:0000002 NCBI chr14:3,081,964...3,138,113
Ensembl chr14:3,081,972...3,138,103
JBrowse link
G SPTLC2 serine palmitoyltransferase long chain base subunit 2 enables IEA InterPro GO_REF:0000002 NCBI chr 7:100,545,360...100,638,973
Ensembl chr 7:100,544,478...100,638,905
JBrowse link
G SPTLC3 serine palmitoyltransferase long chain base subunit 3 enables IEA InterPro GO_REF:0000002 NCBI chr17:21,769,388...21,903,269
Ensembl chr17:21,769,484...21,903,264
JBrowse link
G TAT tyrosine aminotransferase enables IEA InterPro GO_REF:0000002 NCBI chr 6:14,571,311...14,583,203
Ensembl chr 6:14,570,589...14,583,177
JBrowse link
G THNSL2 threonine synthase like 2 enables IEA
IBA
Ensembl
TreeGrafter
GO_Central
GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 3:57,800,976...57,821,296
Ensembl chr 3:57,799,026...57,823,440
JBrowse link
retinal binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALDH1A2 aldehyde dehydrogenase 1 family member A2 ISO RGD PMID:8663198 RGD:724800 NCBI chr 1:113,932,722...114,037,059
Ensembl chr 1:113,932,739...114,037,046
JBrowse link
G RBP2 retinol binding protein 2 enables IEA UniProt GO_REF:0000043 NCBI chr13:80,321,024...80,346,032
Ensembl chr13:80,320,931...80,352,975
JBrowse link
G RBP3 retinol binding protein 3 enables IEA UniProt GO_REF:0000043 NCBI chr14:88,491,701...88,503,388
Ensembl chr14:88,490,013...88,504,510
JBrowse link
G RBP4 retinol binding protein 4 enables IEA UniProt GO_REF:0000043 NCBI chr14:105,037,360...105,044,552
Ensembl chr14:105,037,464...105,044,765
JBrowse link
G RHO rhodopsin ISO 9-cis retinaldehyde
9-cis and 11-cis retinal
RGD PMID:2525480 PMID:8814134 RGD:6893558 RGD:6893595 NCBI chr13:68,908,578...68,913,651
Ensembl chr13:68,908,578...68,913,651
JBrowse link
G STRA6 signaling receptor and transporter of retinol STRA6 enables IEA UniProt GO_REF:0000043 NCBI chr 7:59,317,930...59,347,274
Ensembl chr 7:59,318,011...59,347,266
JBrowse link
retinol binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADH4 alcohol dehydrogenase 4 (class II), pi polypeptide enables IEA Ensembl GO_REF:0000107 NCBI chr 8:121,225,485...121,259,262
NCBI chr  X:98,582,002...98,583,002
Ensembl chr 8:121,225,656...121,261,746
JBrowse link
G LOC100512795 alcohol dehydrogenase class 4 mu/sigma chain enables ISO (PMID:9228021) UniProt
RGD
PMID:9228021 PMID:10829036 RGD:631904 NCBI chr 8:121,020,683...121,041,735
Ensembl chr 8:121,020,969...121,041,506
JBrowse link
G LRAT lecithin retinol acyltransferase ISO RGD PMID:2253789 PMID:8460936 PMID:9244401 RGD:1599829 RGD:1599831 RGD:1599832 NCBI chr 8:74,412,226...74,428,713
Ensembl chr 8:74,409,461...74,419,681
JBrowse link
G PAEP progestagen associated endometrial protein enables IEA UniProt GO_REF:0000043
G RBP1 retinol binding protein 1 ISO RGD PMID:12850148 PMID:16755609 PMID:19965581 RGD:6484697 RGD:6484735 RGD:6893656 NCBI chr13:80,380,958...80,407,328
Ensembl chr13:80,380,962...80,407,458
JBrowse link
G RBP2 retinol binding protein 2 enables ISO
IEA
RGD
UniProt
PMID:12850148 PMID:19965581 GO_REF:0000043 RGD:6484697 RGD:6893656 NCBI chr13:80,321,024...80,346,032
Ensembl chr13:80,320,931...80,352,975
JBrowse link
G RBP3 retinol binding protein 3 enables ISO
IEA
IBA
RGD
TreeGrafter
GO_Central
PMID:8282025 GO_REF:0000033 GO_REF:0000118 RGD:6893658 NCBI chr14:88,491,701...88,503,388
Ensembl chr14:88,490,013...88,504,510
JBrowse link
G RBP4 retinol binding protein 4 enables ISO
IEA
IBA
IDA
(PMID:9757135) RGD
TreeGrafter
GO_Central
Ensembl
UniProt
PMID:9260907 PMID:9757135 GO_REF:0000033 GO_REF:0000043 GO_REF:0000107 GO_REF:0000118 RGD:6484695 NCBI chr14:105,037,360...105,044,552
Ensembl chr14:105,037,464...105,044,765
JBrowse link
G STRA6 signaling receptor and transporter of retinol STRA6 enables IEA UniProt GO_REF:0000043 NCBI chr 7:59,317,930...59,347,274
Ensembl chr 7:59,318,011...59,347,266
JBrowse link
thiamine binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TPK1 thiamin pyrophosphokinase 1 enables IEA UniProt
InterPro
GO_REF:0000002 GO_REF:0000104 NCBI chr 9:112,931,370...113,305,178
Ensembl chr 9:112,931,795...113,305,175
JBrowse link
thiamine pyrophosphate binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DHTKD1 dehydrogenase E1 and transketolase domain containing 1 enables IEA InterPro GO_REF:0000002 NCBI chr10:59,820,418...59,875,322
Ensembl chr10:59,820,423...59,875,290
JBrowse link
G HACL1 2-hydroxyacyl-CoA lyase 1 enables IEA
IBA
InterPro
TreeGrafter
GO_Central
Ensembl
GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr13:2,786,007...2,840,882
Ensembl chr13:2,766,514...2,840,902
JBrowse link
G ILVBL ilvB acetolactate synthase like enables IEA InterPro GO_REF:0000002 NCBI chr 2:62,435,368...62,447,030
Ensembl chr 2:62,435,155...62,451,371
JBrowse link
G OGDH oxoglutarate dehydrogenase enables IEA Ensembl
InterPro
GO_REF:0000002 GO_REF:0000107 NCBI chr18:50,609,415...50,684,990
Ensembl chr18:50,609,418...50,684,964
JBrowse link
G OGDHL oxoglutarate dehydrogenase L enables IEA InterPro GO_REF:0000002 NCBI chr14:90,207,439...90,235,500
Ensembl chr14:90,207,442...90,236,369
JBrowse link
G TKT transketolase enables ISO
IEA
IBA
RGD
TreeGrafter
GO_Central
PMID:16116031 GO_REF:0000033 GO_REF:0000118 RGD:1580394 NCBI chr13:35,348,921...35,377,518
Ensembl chr13:35,348,915...35,377,587
JBrowse link
G TKTL1 transketolase like 1 enables IBA
IEA
GO_Central
TreeGrafter
GO_REF:0000033 GO_REF:0000118 NCBI chr  X:124,840,072...124,867,313
Ensembl chr  X:124,839,995...124,867,614
JBrowse link
G TKTL2 transketolase like 2 enables IEA TreeGrafter GO_REF:0000118 NCBI chr 8:52,325,782...52,328,286
Ensembl chr 8:52,326,545...52,329,300
JBrowse link
vitamin B6 binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SCLY selenocysteine lyase enables ISO PMID:20164179 CAFA PMID:20164179 RGD:12793035 NCBI chr15:137,637,076...137,674,726
Ensembl chr15:137,637,128...137,674,735
JBrowse link
vitamin D binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CALB1 calbindin 1 enables IEA UniProt GO_REF:0000043 NCBI chr 4:46,701,276...46,723,548
Ensembl chr 4:46,701,045...46,725,197
JBrowse link
G COMP cartilage oligomeric matrix protein ISO RGD PMID:12426368 RGD:1298777 NCBI chr 2:59,061,409...59,068,951
Ensembl chr 2:59,061,426...59,069,564
JBrowse link
G GC GC vitamin D binding protein enables ISO
IEA
IBA
RGD
TreeGrafter
GO_Central
InterPro
UniProt
PMID:49052 GO_REF:0000002 GO_REF:0000033 GO_REF:0000043 GO_REF:0000118 RGD:2315532 NCBI chr 8:68,326,293...68,360,262
Ensembl chr 8:68,326,299...68,360,262
JBrowse link
G S100G S100 calcium binding protein G enables IEA UniProt GO_REF:0000043 NCBI chr  X:13,107,611...13,114,213
Ensembl chr  X:13,107,402...13,114,213
JBrowse link
G VDR vitamin D receptor ISO RGD PMID:2829212 RGD:729973 NCBI chr 5:78,205,807...78,266,505
Ensembl chr 5:78,205,810...78,266,475
JBrowse link
vitamin E binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AFM afamin enables IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr 8:69,706,823...69,728,269
Ensembl chr 8:69,706,896...69,728,255
JBrowse link
G NPC1L1 NPC1 like intracellular cholesterol transporter 1 enables ISO (PMID:28315682) UniProt PMID:28315682 NCBI chr18:50,726,854...50,757,676
Ensembl chr18:50,726,922...50,757,649
JBrowse link
G TTPA alpha tocopherol transfer protein enables ISO
IEA
RGD
TreeGrafter
PMID:1569384 GO_REF:0000118 RGD:1600437 NCBI chr 4:70,960,580...70,980,883
Ensembl chr 4:70,961,465...70,980,876
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  molecular_function 18684
    binding 16273
      small molecule binding 5467
        vitamin binding 147
          L-ascorbic acid binding 20
          biotin binding 4
          cobalamin binding 10
          folic acid binding 15
          phosphopantetheine binding 1
          retinal binding + 13
          retinol binding + 12
          thiamine binding 1
          thiamine pyrophosphate binding 8
          vitamin B6 binding + 60
          vitamin D binding + 6
          vitamin E binding 3
paths to the root