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ONTOLOGY REPORT - ANNOTATIONS


Term:retinol binding
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Accession:GO:0019841 term browser browse the term
Definition:Binding to retinol, vitamin A1, 2,6,6-trimethyl-1-(9'-hydroxy-3',7'-dimethylnona-1',3',5',7'-tetraenyl)cyclohex-1-ene, one of the three components that makes up vitamin A. Retinol is an intermediate in the vision cycle and it also plays a role in growth and differentiation.
Synonyms:exact_synonym: vitamin A1 alcohol binding;   vitamin A1 binding


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retinol binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adh4 alcohol dehydrogenase 4 (class II), pi polypeptide enables ISO (PMID:10407146) RGD PMID:10407146 NCBI chr 2:226,948,717...226,966,747 JBrowse link
G Adh7 alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide enables IDA
ISO
(PMID:9228021) RGD PMID:9228021 PMID:10829036 RGD:631904 NCBI chr 2:226,748,724...226,763,183
Ensembl chr 2:226,741,788...226,763,182
JBrowse link
G Crabp1 cellular retinoic acid binding protein 1 enables IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 8:55,138,363...55,159,360
Ensembl chr 8:55,151,285...55,159,360
JBrowse link
G Crabp2 cellular retinoic acid binding protein 2 enables IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 2:173,417,004...173,421,352
Ensembl chr 2:173,416,857...173,421,379
JBrowse link
G Lrat lecithin retinol acyltransferase IDA RGD PMID:8460936 PMID:9244401 PMID:2253789 RGD:1599831, RGD:1599832, RGD:1599829 NCBI chr 2:168,264,093...168,273,155
Ensembl chr 2:168,266,877...168,273,619
JBrowse link
G Rbp1 retinol binding protein 1 IDA RGD PMID:19965581 PMID:12850148 PMID:16755609 RGD:6484697, RGD:6893656, RGD:6484735 NCBI chr 8:99,025,218...99,046,740
Ensembl chr 8:99,025,206...99,046,743
JBrowse link
G Rbp2 retinol binding protein 2 TAS
IDA
RGD PMID:3029082 PMID:12850148 PMID:19965581 RGD:729693, RGD:6893656, RGD:6484697 NCBI chr 8:99,079,293...99,104,489
Ensembl chr 8:99,079,104...99,104,473
JBrowse link
G Rbp3 retinol binding protein 3 enables IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:8282025 PMID:21873635 RGD:6893658, RGD:13792537 NCBI chr16:9,267,538...9,276,006
Ensembl chr16:9,267,538...9,276,006
JBrowse link
G Rbp4 retinol binding protein 4 enables IDA
ISO
IBA
(MGI:3687059|PMID:12484775)
PMID:21873635
(PMID:9757135)
(PMID:571335)
PMID:4708098
RGD PMID:571335 PMID:9757135 PMID:12484775 PMID:9260907 PMID:21873635 More... MGI:3687059, RGD:6484695, RGD:13792537, RGD:11567252 NCBI chr 1:235,893,917...235,901,315
Ensembl chr 1:235,893,917...235,901,399
JBrowse link
G Stra6 signaling receptor and transporter of retinol STRA6 enables IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 8:58,549,743...58,568,861
Ensembl chr 8:58,549,736...58,568,860
JBrowse link
all-trans-retinol binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cyp2w1 cytochrome P450, family 2, subfamily w, polypeptide 1 enables ISO (PMID:26936974) RGD PMID:26936974 NCBI chr12:15,291,552...15,296,421
Ensembl chr12:15,291,704...15,296,421
JBrowse link
G Rbp1 retinol binding protein 1 enables ISO
ISS
(PMID:28057518)
GO_REF:0000024
RGD
UniProt
PMID:28057518 GO_REF:0000024 NCBI chr 8:99,025,218...99,046,740
Ensembl chr 8:99,025,206...99,046,743
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  molecular_function 19979
    binding 17009
      small molecule binding 2508
        vitamin binding 140
          retinol binding 11
            all-trans-retinol binding 2
Path 2
Term Annotations click to browse term
  molecular_function 19979
    binding 17009
      lipid binding 809
        isoprenoid binding 41
          retinoid binding 38
            retinol binding 11
              all-trans-retinol binding 2
paths to the root