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ONTOLOGY REPORT - ANNOTATIONS

Term:stem cell population maintenance
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Accession:GO:0019827 term browser browse the term
Definition:The process by which an organism or tissue maintains a population of stem cells of a single type. This can be achieved by a number of mechanisms: stem cell asymmetric division maintains stem cell numbers; stem cell symmetric division increases them; maintenance of a stem cell niche maintains the conditions for commitment to the stem cell fate for some types of stem cell; stem cells may arise de novo from other cell types.
Synonyms:related_synonym: maintenance of pluripotency

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stem cell population maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apc APC regulator of WNT signaling pathway acts_upstream_of_or_within ISO (PMID:18725524) MGI PMID:18725524 NCBI chrNW_004936531:6,899,580...7,019,016
Ensembl chrNW_004936531:6,899,788...7,019,453 		JBrowse link
G Arid1a AT-rich interaction domain 1A acts_upstream_of_or_within ISO (PMID:18448678) MGI PMID:18448678 NCBI chrNW_004936474:11,148,857...11,197,312 JBrowse link
G Ascl2 achaete-scute family bHLH transcription factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936794:567,462...569,195
Ensembl chrNW_004936794:568,567...569,139 		JBrowse link
G Cdc73 cell division cycle 73 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936638:1,365,457...1,482,497
Ensembl chrNW_004936638:1,365,648...1,483,277 		JBrowse link
G Ctr9 CTR9 homolog, Paf1/RNA polymerase II complex component involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936528:7,585,937...7,613,022
Ensembl chrNW_004936528:7,585,787...7,613,047 		JBrowse link
G Ddx6 DEAD-box helicase 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:25456498) Ensembl
MGI		 PMID:25456498 GO_REF:0000107 NCBI chrNW_004936542:3,748,599...3,781,405
Ensembl chrNW_004936542:3,748,575...3,780,692 		JBrowse link
G Dicer1 dicer 1, ribonuclease III acts_upstream_of_or_within ISO (PMID:14528307) MGI PMID:14528307 NCBI chrNW_004936846:528,768...584,599
Ensembl chrNW_004936846:532,972...575,689 		JBrowse link
G Dis3l2 DIS3 like 3'-5' exoribonuclease 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936525:4,718,773...5,058,512
Ensembl chrNW_004936525:4,719,121...5,008,014 		JBrowse link
G Eif4e eukaryotic translation initiation factor 4E involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:25456498) Ensembl
MGI		 PMID:25456498 GO_REF:0000107 NCBI chrNW_004936520:3,922,457...3,964,721
Ensembl chrNW_004936520:3,922,339...3,960,359 		JBrowse link
G Eif4enif1 eukaryotic translation initiation factor 4E nuclear import factor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:25456498) Ensembl
MGI		 PMID:25456498 GO_REF:0000107 NCBI chrNW_004936755:586,366...635,294
Ensembl chrNW_004936755:586,893...634,559 		JBrowse link
G Eomes eomesodermin involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20176728) Ensembl
MGI		 PMID:20176728 GO_REF:0000107 NCBI chrNW_004936473:18,825,969...18,833,179
Ensembl chrNW_004936473:18,825,942...18,833,179 		JBrowse link
G Esrrb estrogen related receptor beta involved_in ISO (PMID:25522312)
(MGI:5882869|PMID:23169531)
(MGI:5882883|PMID:18957414)		 UniProt PMID:18957414 PMID:23169531 PMID:25522312 MGI:5882869 MGI:5882883 NCBI chrNW_004936488:5,350,133...5,452,366
Ensembl chrNW_004936488:5,292,466...5,454,689 		JBrowse link
G Fgf4 fibroblast growth factor 4 acts_upstream_of_or_within ISO (PMID:15328412) MGI PMID:15328412 NCBI chrNW_004936599:894,091...895,676 JBrowse link
G Fgfr1 fibroblast growth factor receptor 1 ISO RGD PMID:19505325 RGD:2325177 NCBI chrNW_004936710:1,760,365...1,815,269
Ensembl chrNW_004936710:1,760,089...1,815,508 		JBrowse link
G Fzd7 frizzled class receptor 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936726:1,256,684...1,275,324
Ensembl chrNW_004936726:1,256,678...1,275,467 		JBrowse link
G Gnl3 G protein nucleolar 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936473:3,476,436...3,483,868
Ensembl chrNW_004936473:3,476,392...3,483,615 		JBrowse link
G Hesx1 HESX homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:26188092) Ensembl
MGI		 PMID:26188092 GO_REF:0000107 NCBI chrNW_004936473:7,545,982...7,572,222
Ensembl chrNW_004936473:7,545,839...7,548,013 		JBrowse link
G Kdm4c lysine demethylase 4C involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17938240) Ensembl
MGI		 PMID:17938240 GO_REF:0000107 NCBI chrNW_004936539:1,198,105...1,580,078
Ensembl chrNW_004936539:1,198,147...1,580,082 		JBrowse link
G Klf4 KLF transcription factor 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936559:5,105,456...5,109,970
Ensembl chrNW_004936559:5,105,463...5,109,970 		JBrowse link
G Leo1 LEO1 homolog, Paf1/RNA polymerase II complex component involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:13,753,061...13,783,990
Ensembl chrNW_004936471:13,753,030...13,784,049 		JBrowse link
G Lin28a lin-28 homolog A involved_in ISO (PMID:19703396) UniProt PMID:19703396 NCBI chrNW_004936474:10,896,153...10,909,247 JBrowse link
G LOC101960775 cell division cycle and apoptosis regulator protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936521:9,573,918...9,624,469
Ensembl chrNW_004936521:9,569,760...9,625,236
Ensembl chrNW_004936521:9,569,760...9,625,236 		JBrowse link
G Lsm1 LSM1 homolog, mRNA degradation associated involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:25456498) Ensembl
MGI		 PMID:25456498 GO_REF:0000107 NCBI chrNW_004936710:1,546,027...1,551,685
Ensembl chrNW_004936710:1,545,790...1,552,394 		JBrowse link
G Mettl14 methyltransferase 14, N6-adenosine-methyltransferase non-catalytic subunit involved_in IEA Ensembl
UniProt		 GO_REF:0000104 GO_REF:0000107 NCBI chrNW_004936869:568,324...589,972
Ensembl chrNW_004936869:568,840...590,269 		JBrowse link
G Mettl3 methyltransferase 3, N6-adenosine-methyltransferase complex catalytic subunit involved_in ISO (MGI:5559905|PMID:24394384), (MGI:5621227|PMID:25569111), (MGI:5621254|PMID:25456834) UniProt PMID:24394384 PMID:25456834 PMID:25569111 MGI:5559905 MGI:5621227 MGI:5621254 NCBI chrNW_004936880:646,835...661,312
Ensembl chrNW_004936880:644,079...661,544 		JBrowse link
G Mtf2 metal response element binding transcription factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936537:6,071,435...6,134,144
Ensembl chrNW_004936537:6,071,153...6,134,144 		JBrowse link
G Nanog Nanog homeobox acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:17938240) RGD
MGI
Ensembl		 PMID:17938240 PMID:20352099 GO_REF:0000107 RGD:9589811 NCBI chrNW_004936892:181,834...187,691 JBrowse link
G Nfib nuclear factor I B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:32393888) Ensembl
MGI		 PMID:32393888 GO_REF:0000107 NCBI chrNW_004936539:7,763,036...8,185,001
Ensembl chrNW_004936539:7,769,413...7,985,316 		JBrowse link
G Nfix nuclear factor I X acts_upstream_of_or_within ISO (PMID:32393888) MGI PMID:32393888 NCBI chrNW_004936659:2,065,410...2,136,898
Ensembl chrNW_004936659:2,065,458...2,136,889 		JBrowse link
G Nodal nodal growth differentiation factor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15505202) Ensembl
MGI		 PMID:15505202 GO_REF:0000107 NCBI chrNW_004936521:8,171,146...8,178,802
Ensembl chrNW_004936521:8,171,146...8,178,705 		JBrowse link
G Padi4 peptidyl arginine deiminase 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:4,219,183...4,239,551
Ensembl chrNW_004936474:4,221,672...4,238,599 		JBrowse link
G Paf1 PAF1 homolog, Paf1/RNA polymerase II complex component involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936661:2,236,121...2,241,086
Ensembl chrNW_004936661:2,232,484...2,241,629 		JBrowse link
G Pelo pelota mRNA surveillance and ribosome rescue factor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24835669) Ensembl
MGI		 PMID:24835669 GO_REF:0000107 NCBI chrNW_004936480:14,578,718...14,580,690
Ensembl chrNW_004936480:14,577,381...14,582,144 		JBrowse link
G Phf19 PHD finger protein 19 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936487:9,310,327...9,326,650
Ensembl chrNW_004936487:9,310,790...9,326,681 		JBrowse link
G Pou5f1 POU class 5 homeobox 1 involved_in ISO (MGI:5476873|PMID:23376973), (PMID:23798425) MGI PMID:23376973 PMID:23798425 MGI:5476873 NCBI chrNW_004936837:827,568...838,933 JBrowse link
G Prdm14 PR/SET domain 14 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24268575) Ensembl
MGI		 PMID:24268575 GO_REF:0000107 NCBI chrNW_004936496:14,789,443...14,820,967
Ensembl chrNW_004936496:14,806,928...14,820,967 		JBrowse link
G Prdm16 PR/SET domain 16 acts_upstream_of_or_within ISO (PMID:24703692) MGI PMID:24703692 NCBI chrNW_004936737:400,819...446,768
Ensembl chrNW_004936737:404,846...446,985 		JBrowse link
G Rtf1 RTF1 homolog, Paf1/RNA polymerase II complex component involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:4,770,060...4,829,562
Ensembl chrNW_004936471:4,770,063...4,829,578 		JBrowse link
G Setd1a SET domain containing 1A, histone lysine methyltransferase acts_upstream_of_or_within ISO (PMID:24550110) MGI PMID:24550110 NCBI chrNW_004936501:13,339,426...13,363,551
Ensembl chrNW_004936501:13,341,511...13,363,545 		JBrowse link
G Setd6 SET domain containing 6, protein lysine methyltransferase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936475:10,297,468...10,300,778
Ensembl chrNW_004936475:10,296,788...10,300,676 		JBrowse link
G Smarca4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 acts_upstream_of_or_within ISO (PMID:20176728) MGI PMID:20176728 NCBI chrNW_004936659:1,152,846...1,246,718
Ensembl chrNW_004936659:1,169,792...1,249,213 		JBrowse link
G Smc3 structural maintenance of chromosomes 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20720539) Ensembl
MGI		 PMID:20720539 GO_REF:0000107 NCBI chrNW_004936486:1,409,757...1,436,206
Ensembl chrNW_004936486:1,408,045...1,435,875 		JBrowse link
G Smc5 structural maintenance of chromosomes 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:26919979) Ensembl
MGI		 PMID:26919979 GO_REF:0000107 NCBI chrNW_004936503:6,388,556...6,483,293
Ensembl chrNW_004936503:6,388,487...6,483,333 		JBrowse link
G Sox2 SRY-box transcription factor 2 involved_in ISO (MGI:5882869|PMID:23169531) UniProt PMID:23169531 MGI:5882869 NCBI chrNW_004936566:1,630,698...1,632,607
Ensembl chrNW_004936566:1,631,822...1,632,613 		JBrowse link
G Stag2 STAG2 cohesin complex component acts_upstream_of_or_within ISO (PMID:20720539) MGI PMID:20720539 NCBI chrNW_004936479:6,508,539...6,635,127
Ensembl chrNW_004936479:6,508,532...6,632,627 		JBrowse link
G Tbx3 T-box transcription factor 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18356246) Ensembl
MGI		 PMID:18356246 GO_REF:0000107 NCBI chrNW_004936558:7,230,361...7,243,651
Ensembl chrNW_004936558:7,230,668...7,244,361 		JBrowse link
G Tfap2c transcription factor AP-2 gamma acts_upstream_of_or_within ISO (PMID:20176728) MGI PMID:20176728 NCBI chrNW_004936875:491,032...498,732
Ensembl chrNW_004936875:491,017...498,734 		JBrowse link
G Tpt1 tumor protein, translationally-controlled 1 involved_in ISO (MGI:4946164|PMID:21076177) BHF-UCL PMID:21076177 MGI:4946164 NCBI chrNW_004936791:1,439,997...1,443,959
Ensembl chrNW_004936791:1,440,004...1,443,959 		JBrowse link
G Trim8 tripartite motif containing 8 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21689689) Ensembl
MGI		 PMID:21689689 GO_REF:0000107 NCBI chrNW_004936600:3,244,888...3,259,042
Ensembl chrNW_004936600:3,244,405...3,259,218 		JBrowse link
G Tut4 terminal uridylyl transferase 4 involved_in ISO (PMID:19703396) UniProt PMID:19703396 NCBI chrNW_004936522:8,468,092...8,560,453
Ensembl chrNW_004936522:8,469,443...8,560,447 		JBrowse link
G Zic3 Zic family member 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936513:9,780,895...9,792,865
Ensembl chrNW_004936513:9,786,709...9,793,077 		JBrowse link
germ-line stem cell population maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Crebbp CREB binding protein acts_upstream_of_or_within ISO (PMID:17936260) MGI PMID:17936260 NCBI chrNW_004936694:552,447...663,237
Ensembl chrNW_004936694:553,753...663,617 		JBrowse link
G Nanos2 nanos C2HC-type zinc finger 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936706:2,232,265...2,232,657
Ensembl chrNW_004936706:2,232,265...2,232,657 		JBrowse link
G Piwil2 piwi like RNA-mediated gene silencing 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936555:6,078,681...6,133,184
Ensembl chrNW_004936555:6,078,681...6,133,020 		JBrowse link
G Pou5f1 POU class 5 homeobox 1 acts_upstream_of_or_within ISO (PMID:15486564) MGI PMID:15486564 NCBI chrNW_004936837:827,568...838,933 JBrowse link
G Prdm14 PR/SET domain 14 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23670199) Ensembl
MGI		 PMID:23670199 GO_REF:0000107 NCBI chrNW_004936496:14,789,443...14,820,967
Ensembl chrNW_004936496:14,806,928...14,820,967 		JBrowse link
G Tfap2c transcription factor AP-2 gamma acts_upstream_of_or_within ISO (PMID:19776388) MGI PMID:19776388 NCBI chrNW_004936875:491,032...498,732
Ensembl chrNW_004936875:491,017...498,734 		JBrowse link
G Zic3 Zic family member 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936513:9,780,895...9,792,865
Ensembl chrNW_004936513:9,786,709...9,793,077 		JBrowse link
male germ-line stem cell population maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Jmjd1c jumonji domain containing 1C acts_upstream_of_or_within ISO (PMID:24006281) MGI PMID:24006281 NCBI chrNW_004936753:1,413,935...1,645,974
Ensembl chrNW_004936753:1,414,240...1,645,161 		JBrowse link
mesenchymal stem cell maintenance involved in metanephric nephron morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sall1 spalt like transcription factor 1 acts_upstream_of_or_within ISO (PMID:24550112) MGI PMID:24550112 NCBI chrNW_004936475:4,106,663...4,121,356
Ensembl chrNW_004936475:4,106,084...4,121,413 		JBrowse link
mesenchymal stem cell maintenance involved in nephron morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Six2 SIX homeobox 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936508:7,047,563...7,051,129
Ensembl chrNW_004936508:7,047,304...7,051,732 		JBrowse link
G Wnt9b Wnt family member 9B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21350016) Ensembl
MGI		 PMID:21350016 GO_REF:0000107 NCBI chrNW_004936541:1,899,039...1,939,561
Ensembl chrNW_004936541:1,899,039...1,939,561 		JBrowse link
negative regulation of mesenchymal cell apoptotic process involved in mesonephric nephron morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hnf1b HNF1 homeobox B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20040500) Ensembl
MGI		 PMID:20040500 GO_REF:0000107 NCBI chrNW_004936490:649,551...702,448
Ensembl chrNW_004936490:649,546...702,672 		JBrowse link
negative regulation of mesenchymal cell apoptotic process involved in metanephric nephron morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pax2 paired box 2 involved_in ISO (MGI:3704067|PMID:17314325) UniProt PMID:17314325 MGI:3704067 NCBI chrNW_004936600:4,850,594...4,939,010
Ensembl chrNW_004936600:4,850,552...4,928,214 		JBrowse link
G Pax8 paired box 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936783:1,523,658...1,553,464
Ensembl chrNW_004936783:1,523,661...1,576,568 		JBrowse link
negative regulation of mesenchymal cell apoptotic process involved in nephron morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp7 bone morphogenetic protein 7 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9056639) Ensembl
MGI		 PMID:9056639 GO_REF:0000107 NCBI chrNW_004936530:71,965...143,940
Ensembl chrNW_004936530:71,920...143,940 		JBrowse link
negative regulation of stem cell population maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Loxl2 lysyl oxidase like 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936555:6,781,563...6,865,662
Ensembl chrNW_004936555:6,781,321...6,865,768 		JBrowse link
G Wnt9b Wnt family member 9B involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936541:1,899,039...1,939,561
Ensembl chrNW_004936541:1,899,039...1,939,561 		JBrowse link
G Znf706 zinc finger protein 706 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936470:42,245,657...42,253,492
Ensembl chrNW_004936470:42,245,765...42,251,590 		JBrowse link
neuronal stem cell population maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aspm assembly factor for spindle microtubules involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19896444) Ensembl
MGI		 PMID:19896444 GO_REF:0000107 NCBI chrNW_004936567:6,653,382...6,701,856
Ensembl chrNW_004936567:6,653,728...6,701,752 		JBrowse link
G Cdh2 cadherin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936550:6,885,484...7,067,001
Ensembl chrNW_004936550:6,886,706...6,945,056 		JBrowse link
G Dll1 delta like canonical Notch ligand 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004937098:212,704...220,589
Ensembl chrNW_004937098:213,227...220,427 		JBrowse link
G Fancc FA complementation group C involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24483844) Ensembl
MGI		 PMID:24483844 GO_REF:0000107 NCBI chrNW_004936626:3,980,311...4,147,042
Ensembl chrNW_004936626:3,982,647...4,159,976 		JBrowse link
G Fancd2 FA complementation group D2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24483844) Ensembl
MGI		 PMID:24483844 GO_REF:0000107 NCBI chrNW_004936602:3,162,177...3,220,468
Ensembl chrNW_004936602:3,161,960...3,209,868 		JBrowse link
G Foxo1 forkhead box O1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19896444) Ensembl
MGI		 PMID:19896444 GO_REF:0000107 NCBI chrNW_004936565:5,210,014...5,299,213
Ensembl chrNW_004936565:5,210,014...5,302,436 		JBrowse link
G Foxo3 forkhead box O3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19896444)
(PMID:24483844)		 Ensembl
MGI		 PMID:19896444 PMID:24483844 GO_REF:0000107 NCBI chrNW_004936564:4,788,036...4,907,600
Ensembl chrNW_004936564:4,787,992...4,903,837 		JBrowse link
G Fut10 fucosyltransferase 10 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23986452) Ensembl
MGI		 PMID:23986452 GO_REF:0000107 NCBI chrNW_004936766:449,469...551,397
Ensembl chrNW_004936766:449,468...550,884 		JBrowse link
G Hes1 hes family bHLH transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936711:640,002...642,580
Ensembl chrNW_004936711:639,905...642,622 		JBrowse link
G Hes5 hes family bHLH transcription factor 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936737:1,045,496...1,047,865
Ensembl chrNW_004936737:1,046,613...1,047,950 		JBrowse link
G Hook3 hook microtubule tethering protein 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20152126) Ensembl
MGI		 PMID:20152126 GO_REF:0000107 NCBI chrNW_004937108:873...110,949
Ensembl chrNW_004937108:60...110,939 		JBrowse link
G Igf2bp1 insulin like growth factor 2 mRNA binding protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24192035) Ensembl
MGI		 PMID:24192035 GO_REF:0000107 NCBI chrNW_004936490:12,430,343...12,468,794
Ensembl chrNW_004936490:12,430,008...12,469,083 		JBrowse link
G Jag1 jagged canonical Notch ligand 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936485:8,857,688...8,894,270
Ensembl chrNW_004936485:8,857,669...8,895,315 		JBrowse link
G Mapk8 mitogen-activated protein kinase 8 acts_upstream_of_or_within ISO PMID:24388750 MGI PMID:24388750 RGD:10047173 NCBI chrNW_004936728:1,775,746...1,893,895
Ensembl chrNW_004936728:1,775,641...1,893,907 		JBrowse link
G Mcph1 microcephalin 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21947081) Ensembl
MGI		 PMID:21947081 GO_REF:0000107 NCBI chrNW_004936615:4,386,667...4,580,720
Ensembl chrNW_004936615:4,386,635...4,580,747 		JBrowse link
G Mmp24 matrix metallopeptidase 24 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936561:5,479,107...5,501,559
Ensembl chrNW_004936561:5,478,145...5,502,529 		JBrowse link
G Notch1 notch receptor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936669:1,292,016...1,334,061
Ensembl chrNW_004936669:1,292,088...1,332,428 		JBrowse link
G Pcm1 pericentriolar material 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20152126) Ensembl
MGI		 PMID:20152126 GO_REF:0000107 NCBI chrNW_004936554:7,906...86,187
Ensembl chrNW_004936554:7,938...87,756 		JBrowse link
G Prox1 prospero homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936628:4,185,712...4,240,680
Ensembl chrNW_004936628:4,185,706...4,238,451 		JBrowse link
G Prrx1 paired related homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23447615) Ensembl
MGI		 PMID:23447615 GO_REF:0000107 NCBI chrNW_004936481:16,208,243...16,272,836
Ensembl chrNW_004936481:16,205,240...16,272,850 		JBrowse link
G Rest RE1 silencing transcription factor involved_in ISO (MGI:5906102|PMID:27819263) UniProt PMID:27819263 MGI:5906102 NCBI chrNW_004936482:19,018,454...19,040,438 JBrowse link
G Sct secretin acts_upstream_of_or_within ISO (PMID:21159798) MGI PMID:21159798 NCBI chrNW_004936888:459,168...459,919
Ensembl chrNW_004936888:459,247...459,911 		JBrowse link
G Sox2 SRY-box transcription factor 2 involved_in ISO (MGI:5306514|PMID:22198669) UniProt PMID:22198669 MGI:5306514 NCBI chrNW_004936566:1,630,698...1,632,607
Ensembl chrNW_004936566:1,631,822...1,632,613 		JBrowse link
G Srrt serrate, RNA effector molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936543:843,144...855,491
Ensembl chrNW_004936543:843,164...855,491 		JBrowse link
G Ss18 SS18 subunit of BAF chromatin remodeling complex involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23785148) Ensembl
MGI		 PMID:23785148 GO_REF:0000107 NCBI chrNW_004936550:5,199,298...5,284,505
Ensembl chrNW_004936550:5,211,049...5,284,433 		JBrowse link
G Wdr47 WD repeat domain 47 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:29078390) Ensembl
MGI		 PMID:29078390 GO_REF:0000107 NCBI chrNW_004936704:543,189...603,488
Ensembl chrNW_004936704:543,196...603,488 		JBrowse link
positive regulation of somatic stem cell population maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lbh LBH regulator of WNT signaling pathway involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936493:2,750,745...2,776,145
Ensembl chrNW_004936493:2,750,745...2,776,141 		JBrowse link
G Tp63 tumor protein p63 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936578:492,267...705,282
Ensembl chrNW_004936578:491,507...705,729 		JBrowse link
positive regulation of stem cell population maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Esrrb estrogen related receptor beta involved_in ISO (MGI:5440110|PMID:23019124), (MGI:5887187|PMID:26206133)
(MGI:5468900|PMID:23040478), (MGI:5882870|PMID:23040477)		 UniProt PMID:23019124 PMID:23040477 PMID:23040478 PMID:26206133 MGI:5440110 MGI:5468900 MGI:5882870 MGI:5887187 NCBI chrNW_004936488:5,350,133...5,452,366
Ensembl chrNW_004936488:5,292,466...5,454,689 		JBrowse link
G Kdm2b lysine demethylase 2B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21540074) Ensembl
MGI		 PMID:21540074 GO_REF:0000107 NCBI chrNW_004936558:2,771,420...2,897,694
Ensembl chrNW_004936558:2,771,420...2,897,292 		JBrowse link
G Ncoa3 nuclear receptor coactivator 3 involved_in ISO (MGI:5440110|PMID:23019124) UniProt PMID:23019124 MGI:5440110 NCBI chrNW_004936514:5,900,135...5,967,862
Ensembl chrNW_004936514:5,901,601...5,967,865 		JBrowse link
G Prdm14 PR/SET domain 14 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936496:14,789,443...14,820,967
Ensembl chrNW_004936496:14,806,928...14,820,967 		JBrowse link
G Rest RE1 silencing transcription factor involved_in ISO (PMID:21258371) UniProt PMID:21258371 NCBI chrNW_004936482:19,018,454...19,040,438 JBrowse link
G Sirt6 sirtuin 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936588:2,387,162...2,394,066
Ensembl chrNW_004936588:2,386,977...2,394,096 		JBrowse link
G Tead1 TEA domain transcription factor 1 acts_upstream_of_or_within ISO (PMID:20516196) MGI PMID:20516196 NCBI chrNW_004936528:5,607,993...5,774,161
Ensembl chrNW_004936528:5,607,987...5,856,678 		JBrowse link
G Tead3 TEA domain transcription factor 3 acts_upstream_of_or_within ISO (PMID:20516196) MGI PMID:20516196 NCBI chrNW_004936476:23,766,021...23,776,785
Ensembl chrNW_004936476:23,766,012...23,779,349 		JBrowse link
G Tead4 TEA domain transcription factor 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20516196) Ensembl
MGI		 PMID:20516196 GO_REF:0000107 NCBI chrNW_004936606:3,310,905...3,358,519
Ensembl chrNW_004936606:3,310,823...3,356,509 		JBrowse link
G Yap1 Yes1 associated transcriptional regulator involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20516196) Ensembl
MGI		 PMID:20516196 GO_REF:0000107 NCBI chrNW_004936551:5,638,383...5,740,523
Ensembl chrNW_004936551:5,634,751...5,740,567 		JBrowse link
G Znf322 zinc finger protein 322 involved_in ISO (MGI:6114965|PMID:24550733) UniProt PMID:24550733 MGI:6114965 NCBI chrNW_004936671:2,284,119...2,315,994 JBrowse link
regulation of somatic stem cell population maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Myc MYC proto-oncogene, bHLH transcription factor involved_in ISO (MGI:6323493|PMID:31005419) UniProt PMID:31005419 MGI:6323493 NCBI chrNW_004936470:20,480,844...20,485,955
Ensembl chrNW_004936470:20,480,829...20,485,965 		JBrowse link
G Smo smoothened, frizzled class receptor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17199044) Ensembl
MGI		 PMID:17199044 GO_REF:0000107 NCBI chrNW_004936579:5,893,064...5,917,021
Ensembl chrNW_004936579:5,892,542...5,917,281 		JBrowse link
G Taf5l TATA-box binding protein associated factor 5 like involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936484:20,123,039...20,143,063
Ensembl chrNW_004936484:20,127,235...20,143,273 		JBrowse link
G Taf6l TATA-box binding protein associated factor 6 like involved_in ISO (MGI:6323493|PMID:31005419) UniProt PMID:31005419 MGI:6323493 NCBI chrNW_004936581:504,700...519,826
Ensembl chrNW_004936581:504,742...516,737 		JBrowse link
G Tal1 TAL bHLH transcription factor 1, erythroid differentiation factor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19850742) Ensembl
MGI		 PMID:19850742 GO_REF:0000107 NCBI chrNW_004936474:28,049,326...28,061,495
Ensembl chrNW_004936474:28,047,808...28,056,065 		JBrowse link
G Tcf7l1 transcription factor 7 like 1 acts_upstream_of_or_within ISO (PMID:18467660) MGI PMID:18467660 NCBI chrNW_004936712:1,848,478...1,962,644
Ensembl chrNW_004936712:1,848,464...1,962,650 		JBrowse link
regulation of stem cell population maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cnot1 CCR4-NOT transcription complex subunit 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936475:10,302,091...10,384,945
Ensembl chrNW_004936475:10,302,087...10,384,957 		JBrowse link
G Cnot2 CCR4-NOT transcription complex subunit 2 involved_in IEA Ensembl
TreeGrafter
UniProt		 GO_REF:0000107 GO_REF:0000117 GO_REF:0000118 NCBI chrNW_004936545:7,938,934...8,040,409
Ensembl chrNW_004936545:7,938,934...8,042,117 		JBrowse link
G Cnot3 CCR4-NOT transcription complex subunit 3 involved_in IEA Ensembl
TreeGrafter
UniProt		 GO_REF:0000107 GO_REF:0000117 GO_REF:0000118 NCBI chrNW_004936994:256,022...271,235
Ensembl chrNW_004936994:258,938...273,765 		JBrowse link
G Elavl1 ELAV like RNA binding protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936588:4,931,665...4,959,032
Ensembl chrNW_004936588:4,927,950...4,959,064 		JBrowse link
G Hmga2 high mobility group AT-hook 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936545:3,944,419...3,958,289
Ensembl chrNW_004936545:3,944,419...4,064,193 		JBrowse link
G Kat2a lysine acetyltransferase 2A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936490:16,952,698...16,960,424
Ensembl chrNW_004936490:16,952,363...16,960,489 		JBrowse link
G Kdm3a lysine demethylase 3A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17938240) Ensembl
MGI		 PMID:17938240 GO_REF:0000107 NCBI chrNW_004936712:1,053,210...1,097,845
Ensembl chrNW_004936712:1,053,210...1,096,961 		JBrowse link
G Ncoa3 nuclear receptor coactivator 3 acts_upstream_of_or_within ISO (PMID:22977234) MGI PMID:22977234 NCBI chrNW_004936514:5,900,135...5,967,862
Ensembl chrNW_004936514:5,901,601...5,967,865 		JBrowse link
G Ptn pleiotrophin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936592:1,706,979...1,806,345
Ensembl chrNW_004936592:1,707,693...1,730,617 		JBrowse link
G Sav1 salvador family WW domain containing protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18369314) Ensembl
MGI		 PMID:18369314 GO_REF:0000107 NCBI chrNW_004936495:14,955,234...14,977,720
Ensembl chrNW_004936495:14,954,542...14,976,580 		JBrowse link
G Tcf7l1 transcription factor 7 like 1 acts_upstream_of_or_within ISO (PMID:18347094) MGI PMID:18347094 NCBI chrNW_004936712:1,848,478...1,962,644
Ensembl chrNW_004936712:1,848,464...1,962,650 		JBrowse link
G Tcl1a TCL1 family AKT coactivator A acts_upstream_of_or_within ISO (PMID:17938240) MGI PMID:17938240 NCBI chrNW_004936604:127,841...131,056 JBrowse link
G Wdr43 WD repeat domain 43 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936493:3,871,167...3,914,172
Ensembl chrNW_004936493:3,869,906...3,914,215 		JBrowse link
G Zc3h13 zinc finger CCCH-type containing 13 involved_in ISO (MGI:6158697|PMID:29547716) UniProt PMID:29547716 MGI:6158697 NCBI chrNW_004936857:495,904...576,984
Ensembl chrNW_004936857:496,344...568,250 		JBrowse link
somatic stem cell population maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apc APC regulator of WNT signaling pathway acts_upstream_of_or_within ISO (PMID:18725524)
(PMID:1541640)		 MGI PMID:1541640 PMID:18725524 NCBI chrNW_004936531:6,899,580...7,019,016
Ensembl chrNW_004936531:6,899,788...7,019,453 		JBrowse link
G Ascl2 achaete-scute family bHLH transcription factor 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19269367) Ensembl
MGI		 PMID:19269367 GO_REF:0000107 NCBI chrNW_004936794:567,462...569,195
Ensembl chrNW_004936794:568,567...569,139 		JBrowse link
G Bcl9 BCL9 transcription coactivator involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20682801) Ensembl
MGI		 PMID:20682801 GO_REF:0000107 NCBI chrNW_004936867:136,798...158,936
Ensembl chrNW_004936867:139,418...158,763 		JBrowse link
G Bcl9l BCL9 like involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20682801) Ensembl
MGI		 PMID:20682801 GO_REF:0000107 NCBI chrNW_004936542:3,873,530...3,902,871
Ensembl chrNW_004936542:3,875,801...3,886,824 		JBrowse link
G Bmpr1a bone morphogenetic protein receptor type 1A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17699604) Ensembl
MGI		 PMID:17699604 GO_REF:0000107 NCBI chrNW_004936804:52,435...115,289
Ensembl chrNW_004936804:48,947...115,412 		JBrowse link
G Braf B-Raf proto-oncogene, serine/threonine kinase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23022482) Ensembl
MGI		 PMID:23022482 GO_REF:0000107 NCBI chrNW_004936592:4,728,371...4,833,830
Ensembl chrNW_004936592:4,737,011...4,834,664 		JBrowse link
G Cdx2 caudal type homeobox 2 acts_upstream_of_or_within ISO (PMID:16325584)
(PMID:20404091)		 MGI PMID:16325584 PMID:20404091 NCBI chrNW_004936472:23,137,936...23,141,205 JBrowse link
G Cul4a cullin 4A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17616641) Ensembl
MGI		 PMID:17616641 GO_REF:0000107 NCBI chrNW_004936472:409,083...432,442
Ensembl chrNW_004936472:408,659...432,379 		JBrowse link
G Elf5 E74 like ETS transcription factor 5 acts_upstream_of_or_within ISO (PMID:24859262) MGI PMID:24859262 NCBI chrNW_004936533:3,569,435...3,595,991
Ensembl chrNW_004936533:3,569,452...3,596,004 		JBrowse link
G Esrrb estrogen related receptor beta acts_upstream_of_or_within ISO (PMID:16518401), (PMID:16767105), (PMID:20720539) MGI PMID:16518401 PMID:16767105 PMID:20720539 NCBI chrNW_004936488:5,350,133...5,452,366
Ensembl chrNW_004936488:5,292,466...5,454,689 		JBrowse link
G Fgf10 fibroblast growth factor 10 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11880361) Ensembl
MGI		 PMID:11880361 GO_REF:0000107 NCBI chrNW_004936480:18,114,231...18,195,884
Ensembl chrNW_004936480:18,114,204...18,195,898 		JBrowse link
G Fgf4 fibroblast growth factor 4 acts_upstream_of_or_within ISO (PMID:15328412) MGI PMID:15328412 NCBI chrNW_004936599:894,091...895,676 JBrowse link
G Fgfr3 fibroblast growth factor receptor 3 acts_upstream_of_or_within ISO (PMID:19407216) MGI PMID:19407216 NCBI chrNW_004936477:21,591,772...21,606,289
Ensembl chrNW_004936477:21,591,792...21,606,296 		JBrowse link
G Gata2 GATA binding protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16082385) Ensembl
MGI		 PMID:16082385 GO_REF:0000107 NCBI chrNW_004936798:406,258...414,785
Ensembl chrNW_004936798:406,258...414,931 		JBrowse link
G Hes1 hes family bHLH transcription factor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10615124) Ensembl
MGI		 PMID:10615124 GO_REF:0000107 NCBI chrNW_004936711:640,002...642,580
Ensembl chrNW_004936711:639,905...642,622 		JBrowse link
G Hmga2 high mobility group AT-hook 2 acts_upstream_of_or_within ISO (PMID:18957199) MGI PMID:18957199 NCBI chrNW_004936545:3,944,419...3,958,289
Ensembl chrNW_004936545:3,944,419...4,064,193 		JBrowse link
G Kat6a lysine acetyltransferase 6A acts_upstream_of_or_within ISO (PMID:16651658)
(PMID:16702405)		 MGI PMID:16651658 PMID:16702405 NCBI chrNW_004936785:602,754...704,504
Ensembl chrNW_004936785:603,478...701,791 		JBrowse link
G Kit KIT proto-oncogene, receptor tyrosine kinase ISO neural stem cells from the ciliary epithelium of the eye RGD PMID:15302600 RGD:2292509 NCBI chrNW_004936482:17,162,854...17,238,319
Ensembl chrNW_004936482:17,162,950...17,238,274 		JBrowse link
G Klf10 KLF transcription factor 10 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19379700) Ensembl
MGI		 PMID:19379700 GO_REF:0000107 NCBI chrNW_004936470:40,980,487...40,986,880
Ensembl chrNW_004936470:40,980,487...40,986,885 		JBrowse link
G Klf4 KLF transcription factor 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15358627) Ensembl
MGI		 PMID:15358627 GO_REF:0000107 NCBI chrNW_004936559:5,105,456...5,109,970
Ensembl chrNW_004936559:5,105,463...5,109,970 		JBrowse link
G Ldb1 LIM domain binding 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17991461) Ensembl
MGI		 PMID:17991461 GO_REF:0000107 NCBI chrNW_004936600:3,714,630...3,728,813
Ensembl chrNW_004936600:3,714,095...3,728,815 		JBrowse link
G Ldb2 LIM domain binding 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17991461) Ensembl
MGI		 PMID:17991461 GO_REF:0000107 NCBI chrNW_004936477:11,199,200...11,538,699
Ensembl chrNW_004936477:11,199,003...11,538,728 		JBrowse link
G Lif LIF interleukin 6 family cytokine involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15358627) Ensembl
MGI		 PMID:15358627 GO_REF:0000107 NCBI chrNW_004936904:410,043...413,256
Ensembl chrNW_004936904:410,043...413,257 		JBrowse link
G Lig4 DNA ligase 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17554302) Ensembl
MGI		 PMID:17554302 GO_REF:0000107 NCBI chrNW_004936472:3,861,833...3,867,943
Ensembl chrNW_004936472:3,861,866...3,867,933 		JBrowse link
G LOC101967362 mediator of RNA polymerase II transcription subunit 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20720539) Ensembl
MGI		 PMID:20720539 GO_REF:0000107 NCBI chrNW_004936488:195,629...218,762
Ensembl chrNW_004936488:97,118...99,286
Ensembl chrNW_004936488:97,118...99,286 		JBrowse link
G Lrp5 LDL receptor related protein 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19672307) Ensembl
MGI		 PMID:19672307 GO_REF:0000107 NCBI chrNW_004936599:1,746,309...1,814,471
Ensembl chrNW_004936599:1,746,406...1,814,321 		JBrowse link
G Med10 mediator complex subunit 10 acts_upstream_of_or_within ISO (PMID:20720539) MGI PMID:20720539 NCBI chrNW_004936634:953,567...983,426 JBrowse link
G Med12 mediator complex subunit 12 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20720539) Ensembl
MGI		 PMID:20720539 GO_REF:0000107 NCBI chrNW_004936762:460,342...483,264
Ensembl chrNW_004936762:460,342...483,195 		JBrowse link
G Med14 mediator complex subunit 14 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20720539) Ensembl
MGI		 PMID:20720539 GO_REF:0000107 NCBI chrNW_004936502:7,280,606...7,350,750
Ensembl chrNW_004936502:7,280,534...7,350,435 		JBrowse link
G Med15 mediator complex subunit 15 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20720539) Ensembl
MGI		 PMID:20720539 GO_REF:0000107 NCBI chrNW_004936619:2,687,004...2,780,898
Ensembl chrNW_004936619:2,687,011...2,759,294 		JBrowse link
G Med17 mediator complex subunit 17 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20720539) Ensembl
MGI		 PMID:20720539 GO_REF:0000107 NCBI chrNW_004936674:998,036...1,019,937
Ensembl chrNW_004936674:997,259...1,019,953 		JBrowse link
G Med21 mediator complex subunit 21 acts_upstream_of_or_within ISO (PMID:20720539) MGI PMID:20720539 NCBI chrNW_004936548:461,610...466,682
Ensembl chrNW_004936548:461,605...466,723 		JBrowse link
G Med24 mediator complex subunit 24 acts_upstream_of_or_within ISO (PMID:20720539) MGI PMID:20720539 NCBI chrNW_004936490:15,146,598...15,181,449
Ensembl chrNW_004936490:15,146,579...15,171,118 		JBrowse link
G Med27 mediator complex subunit 27 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20720539) Ensembl
MGI		 PMID:20720539 GO_REF:0000107 NCBI chrNW_004936487:18,523,979...18,711,584
Ensembl chrNW_004936487:18,523,010...18,711,618 		JBrowse link
G Med28 mediator complex subunit 28 acts_upstream_of_or_within ISO (PMID:20720539) MGI PMID:20720539 NCBI chrNW_004936477:10,586,436...10,592,366 JBrowse link
G Med30 mediator complex subunit 30 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20720539) Ensembl
MGI		 PMID:20720539 GO_REF:0000107 NCBI chrNW_004936470:28,798,356...28,822,143
Ensembl chrNW_004936470:28,798,649...28,817,176 		JBrowse link
G Med7 mediator complex subunit 7 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20720539) Ensembl
MGI		 PMID:20720539 GO_REF:0000107 NCBI chrNW_004936515:5,987,923...5,993,074
Ensembl chrNW_004936515:5,987,858...5,993,074 		JBrowse link
G Nanog Nanog homeobox involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16801560)
(PMID:16767105), (PMID:20720539)
(PMID:12787504)		 Ensembl
MGI		 PMID:12787504 PMID:16767105 PMID:16801560 PMID:20720539 GO_REF:0000107 NCBI chrNW_004936892:181,834...187,691 JBrowse link
G Nipbl NIPBL cohesin loading factor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20720539) Ensembl
MGI		 PMID:20720539 GO_REF:0000107 NCBI chrNW_004936518:4,870,686...5,041,099
Ensembl chrNW_004936518:4,869,546...4,969,450 		JBrowse link
G Nkap NFKB activating protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20610818) Ensembl
MGI		 PMID:20610818 GO_REF:0000107 NCBI chrNW_004936479:10,024,674...10,041,738
Ensembl chrNW_004936479:10,024,705...10,041,590 		JBrowse link
G Nodal nodal growth differentiation factor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15505202)
(PMID:16678814)		 Ensembl
MGI		 PMID:15505202 PMID:16678814 GO_REF:0000107 NCBI chrNW_004936521:8,171,146...8,178,802
Ensembl chrNW_004936521:8,171,146...8,178,705 		JBrowse link
G Nog noggin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936490:6,262,651...6,264,069
Ensembl chrNW_004936490:6,262,785...6,263,483 		JBrowse link
G Nr2e1 nuclear receptor subfamily 2 group E member 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:14702088)
(PMID:12527005)
(PMID:18794344)		 Ensembl
MGI		 PMID:12527005 PMID:14702088 PMID:18794344 GO_REF:0000107 NCBI chrNW_004936564:4,432,556...4,453,056
Ensembl chrNW_004936564:4,432,485...4,453,486 		JBrowse link
G Pla2g2a phospholipase A2 group IIA acts_upstream_of_or_within ISO (PMID:1541640) MGI PMID:1541640 NCBI chrNW_004936474:6,091,978...6,095,961
Ensembl chrNW_004936474:6,091,941...6,096,057 		JBrowse link
G Pou5f1 POU class 5 homeobox 1 involved_in
acts_upstream_of_or_within		 ISO (PMID:19409607)
(PMID:14502573), (PMID:16767105), (PMID:20720539)
(PMID:9814708)
(PMID:18388306), (PMID:19736317)		 UniProt
MGI
BHF-UCL		 PMID:9814708 PMID:14502573 PMID:16767105 PMID:18388306 PMID:19409607 More... NCBI chrNW_004936837:827,568...838,933 JBrowse link
G Prdm16 PR/SET domain 16 acts_upstream_of_or_within ISO (PMID:19379700) MGI PMID:19379700 NCBI chrNW_004936737:400,819...446,768
Ensembl chrNW_004936737:404,846...446,985 		JBrowse link
G Raf1 Raf-1 proto-oncogene, serine/threonine kinase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23022482) Ensembl
MGI		 PMID:23022482 GO_REF:0000107 NCBI chrNW_004936602:1,089,979...1,114,376
Ensembl chrNW_004936602:1,051,205...1,117,096 		JBrowse link
G Rbpj recombination signal binding protein for immunoglobulin kappa J region involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21402740) Ensembl
MGI		 PMID:21402740 GO_REF:0000107 NCBI chrNW_004936477:3,354,336...3,445,248
Ensembl chrNW_004936477:3,349,627...3,461,797 		JBrowse link
G Rest RE1 silencing transcription factor involved_in ISO (MGI:5906102|PMID:27819263) UniProt PMID:27819263 MGI:5906102 NCBI chrNW_004936482:19,018,454...19,040,438 JBrowse link
G Rif1 replication timing regulatory factor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16518401) Ensembl
MGI		 PMID:16518401 GO_REF:0000107 NCBI chrNW_004936469:26,045,500...26,105,980
Ensembl chrNW_004936469:26,048,953...26,105,997 		JBrowse link
G Sall4 spalt like transcription factor 4 acts_upstream_of_or_within ISO (PMID:20720539) MGI PMID:20720539 NCBI chrNW_004936514:3,285,778...3,302,179
Ensembl chrNW_004936514:3,285,531...3,303,644 		JBrowse link
G Sfrp1 secreted frizzled related protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19664990) Ensembl
MGI		 PMID:19664990 GO_REF:0000107 NCBI chrNW_004936785:1,276,478...1,320,397
Ensembl chrNW_004936785:1,276,420...1,321,017 		JBrowse link
G Ski SKI proto-oncogene acts_upstream_of_or_within ISO (PMID:19379700) MGI PMID:19379700 NCBI chrNW_004936737:1,223,653...1,274,664
Ensembl chrNW_004936737:1,222,341...1,276,631 		JBrowse link
G Smc1a structural maintenance of chromosomes 1A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20720539) Ensembl
MGI		 PMID:20720539 GO_REF:0000107 NCBI chrNW_004936751:332,351...388,756
Ensembl chrNW_004936751:349,597...388,755 		JBrowse link
G Sox2 SRY-box transcription factor 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16767105), (PMID:20720539) Ensembl
MGI		 PMID:16767105 PMID:20720539 GO_REF:0000107 NCBI chrNW_004936566:1,630,698...1,632,607
Ensembl chrNW_004936566:1,631,822...1,632,613 		JBrowse link
G Sox9 SRY-box transcription factor 9 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20871603) Ensembl
MGI		 PMID:20871603 GO_REF:0000107 NCBI chrNW_004936655:1,849,044...1,852,648
Ensembl chrNW_004936655:1,847,272...1,852,705 		JBrowse link
G Spi1 Spi-1 proto-oncogene acts_upstream_of_or_within ISO (PMID:19379700) MGI PMID:19379700 NCBI chrNW_004936562:1,852,759...1,870,647
Ensembl chrNW_004936562:1,852,740...1,870,472 		JBrowse link
G Stat3 signal transducer and activator of transcription 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20720539) Ensembl
MGI		 PMID:20720539 GO_REF:0000107 NCBI chrNW_004936490:17,119,189...17,178,402
Ensembl chrNW_004936490:17,117,290...17,178,402 		JBrowse link
G Tbx1 T-box transcription factor 1 involved_in ISO (MGI:5319410|PMID:22495305) UniProt PMID:22495305 MGI:5319410 NCBI chrNW_004936619:3,662,567...3,670,470
Ensembl chrNW_004936619:3,664,468...3,670,525 		JBrowse link
G Tcf7l1 transcription factor 7 like 1 acts_upstream_of_or_within ISO (PMID:19718027) MGI PMID:19718027 NCBI chrNW_004936712:1,848,478...1,962,644
Ensembl chrNW_004936712:1,848,464...1,962,650 		JBrowse link
G Tcf7l2 transcription factor 7 like 2 acts_upstream_of_or_within ISO (PMID:19718027)
(PMID:10027409), (PMID:19251639), (PMID:9697701)		 MGI PMID:9697701 PMID:10027409 PMID:19251639 PMID:19718027 NCBI chrNW_004936486:3,473,877...3,660,565
Ensembl chrNW_004936486:3,473,843...3,660,576 		JBrowse link
G Tcl1a TCL1 family AKT coactivator A acts_upstream_of_or_within ISO (PMID:16767105) MGI PMID:16767105 NCBI chrNW_004936604:127,841...131,056 JBrowse link
G Tfap2c transcription factor AP-2 gamma acts_upstream_of_or_within ISO (PMID:20404091) MGI PMID:20404091 NCBI chrNW_004936875:491,032...498,732
Ensembl chrNW_004936875:491,017...498,734 		JBrowse link
G Vangl2 VANGL planar cell polarity protein 2 acts_upstream_of_or_within ISO (PMID:19497282) MGI PMID:19497282 NCBI chrNW_004936740:228,377...242,318
Ensembl chrNW_004936740:228,317...242,601 		JBrowse link
G Vps72 vacuolar protein sorting 72 homolog involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19379700) Ensembl
MGI		 PMID:19379700 GO_REF:0000107 NCBI chrNW_004936580:1,381,454...1,395,319
Ensembl chrNW_004936580:1,381,440...1,395,332 		JBrowse link
G Wnt7a Wnt family member 7A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19497282) Ensembl
MGI		 PMID:19497282 GO_REF:0000107 NCBI chrNW_004936898:45,903...70,313
Ensembl chrNW_004936898:45,115...70,326 		JBrowse link
G Yap1 Yes1 associated transcriptional regulator involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17980593) Ensembl
MGI		 PMID:17980593 GO_REF:0000107 NCBI chrNW_004936551:5,638,383...5,740,523
Ensembl chrNW_004936551:5,634,751...5,740,567 		JBrowse link
G Zfp36l2 ZFP36 ring finger protein like 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936508:8,617,185...8,620,823
Ensembl chrNW_004936508:8,617,100...8,621,495 		JBrowse link
G Zhx2 zinc fingers and homeoboxes 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19515908) Ensembl
MGI		 PMID:19515908 GO_REF:0000107 NCBI chrNW_004936470:24,315,371...24,476,063
Ensembl chrNW_004936470:24,315,404...24,474,282 		JBrowse link
Term paths to the root