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ONTOLOGY REPORT - ANNOTATIONS


Term:stem cell population maintenance
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Accession:GO:0019827 term browser browse the term
Definition:The process by which an organism or tissue maintains a population of stem cells of a single type. This can be achieved by a number of mechanisms: stem cell asymmetric division maintains stem cell numbers; stem cell symmetric division increases them; maintenance of a stem cell niche maintains the conditions for commitment to the stem cell fate for some types of stem cell; stem cells may arise de novo from other cell types.
Synonyms:related_synonym: maintenance of pluripotency



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stem cell population maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APC APC regulator of WNT signaling pathway acts_upstream_of_or_within ISO (MGI:3806418|PMID:18725524) MGI PMID:18725524 MGI:3806418 NCBI chr 2:116,913,354...116,985,303
Ensembl chr 2:116,812,582...117,034,912
JBrowse link
G ARID1A AT-rich interaction domain 1A acts_upstream_of_or_within ISO (MGI:3789431|PMID:18448678) MGI PMID:18448678 MGI:3789431 NCBI chr 6:84,049,729...84,124,302
Ensembl chr 6:84,049,365...84,123,384
JBrowse link
G BMPR1A bone morphogenetic protein receptor type 1A involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3722226|PMID:17699604) Ensembl
MGI
PMID:17699604 GO_REF:0000107 MGI:3722226 NCBI chr14:87,743,270...87,891,790
Ensembl chr14:87,742,459...87,891,793
JBrowse link
G CDC73 cell division cycle 73 involved_in ISO (MGI:3849235|PMID:19345177) UniProt PMID:19345177 MGI:3849235 NCBI chr10:575,075...667,618
Ensembl chr10:575,074...667,434
JBrowse link
G CTR9 CTR9 homolog, Paf1/RNA polymerase II complex component involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:48,700,629...48,729,480
Ensembl chr 2:48,697,972...48,729,307
JBrowse link
G DDX6 DEAD-box helicase 6 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5614138|PMID:25456498) Ensembl
MGI
PMID:25456498 GO_REF:0000107 MGI:5614138 NCBI chr 9:46,025,616...46,063,836
Ensembl chr 9:46,025,445...46,063,814
JBrowse link
G DICER1 dicer 1, ribonuclease III acts_upstream_of_or_within ISO (MGI:2679763|PMID:14528307) MGI PMID:14528307 MGI:2679763 NCBI chr 7:116,361,630...116,436,471
Ensembl chr 7:116,361,630...116,436,519
JBrowse link
G DIS3L2 DIS3 like 3'-5' exoribonuclease 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:132,540,784...132,902,943
Ensembl chr15:132,540,558...132,959,793
JBrowse link
G DPPA2 developmental pluripotency associated 2 acts_upstream_of_or_within ISO (MGI:4887319|PMID:19846433) MGI PMID:19846433 MGI:4887319 NCBI chr13:150,186,833...150,200,612
Ensembl chr13:150,186,878...150,204,369
JBrowse link
G EIF4E eukaryotic translation initiation factor 4E involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5614138|PMID:25456498) Ensembl
MGI
PMID:25456498 GO_REF:0000107 MGI:5614138 NCBI chr 8:121,409,633...121,464,467
Ensembl chr 8:121,409,731...121,466,899
JBrowse link
G EIF4ENIF1 eukaryotic translation initiation factor 4E nuclear import factor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5614138|PMID:25456498) Ensembl
MGI
PMID:25456498 GO_REF:0000107 MGI:5614138 NCBI chr14:48,156,835...48,204,701
Ensembl chr14:48,156,727...48,204,926
JBrowse link
G EOMES eomesodermin acts_upstream_of_or_within ISO (MGI:4454524|PMID:20176728) MGI PMID:20176728 MGI:4454524 NCBI chr13:14,209,590...14,216,184
Ensembl chr13:14,210,083...14,215,797
JBrowse link
G ESRRB estrogen related receptor beta acts_upstream_of_or_within
involved_in
ISO (MGI:3621412|PMID:16518401), (MGI:3654397|PMID:16767105), (MGI:4833901|PMID:20720539)
(PMID:25522312)
(MGI:5882883|PMID:18957414)
(MGI:5882869|PMID:23169531)
MGI
UniProt
PMID:16518401 PMID:16767105 PMID:18957414 PMID:20720539 PMID:23169531 More... MGI:3621412 MGI:3654397 MGI:4833901 MGI:5882869 MGI:5882883 NCBI chr 7:99,511,135...99,699,478
Ensembl chr 7:99,514,168...99,699,011
JBrowse link
G FGF4 fibroblast growth factor 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3052627|PMID:15328412) Ensembl
MGI
PMID:15328412 GO_REF:0000107 MGI:3052627 NCBI chr 2:3,527,113...3,529,011
Ensembl chr 2:3,527,113...3,528,873
JBrowse link
G FGFR1 fibroblast growth factor receptor 1 ISO RGD PMID:19505325 RGD:2325177 NCBI chr15:48,053,895...48,106,634
Ensembl chr15:48,053,340...48,106,746
JBrowse link
G FZD7 frizzled class receptor 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:105,644,164...105,648,860
Ensembl chr15:105,644,188...105,648,854
JBrowse link
G GNL3 G protein nucleolar 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:34,820,243...34,828,523
Ensembl chr13:34,814,901...34,828,517
JBrowse link
G HESX1 HESX homeobox 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:6478093|PMID:26188092) Ensembl
MGI
PMID:26188092 GO_REF:0000107 MGI:6478093 NCBI chr13:39,046,961...39,088,926
Ensembl chr13:39,046,465...39,088,875
JBrowse link
G KDM4C lysine demethylase 4C acts_upstream_of_or_within ISO (MGI:3759699|PMID:17938240) MGI PMID:17938240 MGI:3759699 NCBI chr 1:215,071,335...215,507,778
Ensembl chr 1:215,071,334...215,507,800
JBrowse link
G KLF4 Kruppel like factor 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3530919|PMID:15358627) Ensembl
MGI
PMID:15358627 GO_REF:0000107 MGI:3530919 NCBI chr 1:248,604,817...248,609,574
Ensembl chr 1:248,604,820...248,609,574
JBrowse link
G LEO1 LEO1 homolog, Paf1/RNA polymerase II complex component involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:119,804,992...119,842,343
Ensembl chr 1:119,805,039...119,897,073
JBrowse link
G LIF LIF interleukin 6 family cytokine involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3530919|PMID:15358627) Ensembl
MGI
PMID:15358627 GO_REF:0000107 MGI:3530919 NCBI chr14:47,221,540...47,239,513
Ensembl chr14:47,221,560...47,238,749
JBrowse link
G LIN28A lin-28 homolog A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:83,806,178...83,818,550
Ensembl chr 6:83,806,122...83,818,631
JBrowse link
G MED10 mediator complex subunit 10 acts_upstream_of_or_within ISO (MGI:4833901|PMID:20720539) MGI PMID:20720539 MGI:4833901 NCBI chr16:75,516,992...75,524,761 JBrowse link
G MED12 mediator complex subunit 12 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4833901|PMID:20720539) Ensembl
MGI
PMID:20720539 GO_REF:0000107 MGI:4833901 NCBI chr  X:57,150,884...57,174,367
Ensembl chr  X:57,150,578...57,175,352
JBrowse link
G MED14 mediator complex subunit 14 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4833901|PMID:20720539) Ensembl
MGI
PMID:20720539 GO_REF:0000107 MGI:4833901 NCBI chr  X:36,354,057...36,424,837
Ensembl chr  X:36,354,061...36,424,715
JBrowse link
G MED15 mediator complex subunit 15 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4833901|PMID:20720539) Ensembl
MGI
PMID:20720539 GO_REF:0000107 MGI:4833901 NCBI chr14:50,703,010...50,759,310
Ensembl chr14:50,703,012...50,759,283
JBrowse link
G MED17 mediator complex subunit 17 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4833901|PMID:20720539) Ensembl
MGI
PMID:20720539 GO_REF:0000107 MGI:4833901 NCBI chr 9:26,192,206...26,214,177
Ensembl chr 9:26,167,401...26,228,612
JBrowse link
G MED21 mediator complex subunit 21 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4833901|PMID:20720539) Ensembl
MGI
PMID:20720539 GO_REF:0000107 MGI:4833901 NCBI chr 5:46,704,358...46,736,434
Ensembl chr 5:46,725,564...46,736,389
JBrowse link
G MED24 mediator complex subunit 24 acts_upstream_of_or_within ISO (MGI:4833901|PMID:20720539) MGI PMID:20720539 MGI:4833901 NCBI chr12:22,309,004...22,332,203
Ensembl chr12:22,296,146...22,332,199
JBrowse link
G MED27 mediator complex subunit 27 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4833901|PMID:20720539) Ensembl
MGI
PMID:20720539 GO_REF:0000107 MGI:4833901 NCBI chr 1:271,724,910...271,928,367
Ensembl chr 1:271,724,910...271,928,367
JBrowse link
G MED28 mediator complex subunit 28 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4833901|PMID:20720539) Ensembl
MGI
PMID:20720539 GO_REF:0000107 MGI:4833901 NCBI chr 8:12,624,096...12,633,251
Ensembl chr 8:12,624,109...12,635,334
JBrowse link
G MED30 mediator complex subunit 30 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4833901|PMID:20720539) Ensembl
MGI
PMID:20720539 GO_REF:0000107 MGI:4833901 NCBI chr 4:21,198,740...21,215,634
Ensembl chr 4:21,194,930...21,215,618
JBrowse link
G MED6 mediator complex subunit 6 acts_upstream_of_or_within ISO (MGI:4833901|PMID:20720539) MGI PMID:20720539 MGI:4833901 NCBI chr 7:94,157,624...94,184,606
Ensembl chr 7:94,157,731...94,219,385
JBrowse link
G MED7 mediator complex subunit 7 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4833901|PMID:20720539) Ensembl
MGI
PMID:20720539 GO_REF:0000107 MGI:4833901 NCBI chr16:66,114,596...66,121,096
Ensembl chr16:66,000,010...66,123,781
JBrowse link
G METTL14 methyltransferase 14, N6-adenosine-methyltransferase subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:105,019,539...105,053,603
Ensembl chr 8:105,015,420...105,053,563
JBrowse link
G METTL3 methyltransferase 3, N6-adenosine-methyltransferase complex catalytic subunit involved_in ISO (MGI:5559905|PMID:24394384), (MGI:5621227|PMID:25569111), (MGI:5621254|PMID:25456834) UniProt PMID:24394384 PMID:25456834 PMID:25569111 MGI:5559905 MGI:5621227 MGI:5621254 NCBI chr 7:77,661,945...77,679,459
Ensembl chr 7:77,662,058...77,695,948
JBrowse link
G MTF2 metal response element binding transcription factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:124,051,586...124,124,440
Ensembl chr 4:124,050,097...124,124,438
JBrowse link
G NANOG Nanog homeobox involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15108323)
(MGI:3759699|PMID:17938240)
(MGI:3654744|PMID:16801560)
(MGI:2661864|PMID:12787504)
(MGI:3654397|PMID:16767105), (MGI:4833901|PMID:20720539)
Ensembl
BHF-UCL
MGI
RGD
PMID:12787504 PMID:15108323 PMID:16767105 PMID:16801560 PMID:17938240 More... GO_REF:0000107 MGI:2661864 MGI:3654397 MGI:3654744 MGI:3759699 MGI:4833901 RGD:9589811 NCBI chr 5:62,931,642...62,939,086
Ensembl chr 5:62,932,382...62,939,082
JBrowse link
G NIPBL NIPBL cohesin loading factor involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4833901|PMID:20720539) Ensembl
MGI
PMID:20720539 GO_REF:0000107 MGI:4833901 NCBI chr16:22,152,455...22,364,373
Ensembl chr16:22,152,501...22,363,847
JBrowse link
G NKAP NFKB activating protein acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4838711|PMID:20610818) MGI
Ensembl
PMID:20610818 GO_REF:0000107 MGI:4838711 NCBI chr  X:98,233,504...98,276,839
Ensembl chr  X:98,227,659...98,276,812
JBrowse link
G NODAL nodal growth differentiation factor involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3640721|PMID:16678814)
(MGI:3057068|PMID:15505202)
Ensembl
MGI
PMID:15505202 PMID:16678814 GO_REF:0000107 MGI:3057068 MGI:3640721 NCBI chr14:73,350,358...73,357,064
Ensembl chr14:73,349,965...73,360,618
JBrowse link
G PADI4 peptidyl arginine deiminase 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:75,935,909...75,966,275
Ensembl chr 6:75,935,903...75,966,169
JBrowse link
G PAF1 PAF1 homolog, Paf1/RNA polymerase II complex component involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:48,046,487...48,053,631
Ensembl chr 6:48,046,691...48,059,035
JBrowse link
G PELO pelota mRNA surveillance and ribosome rescue factor involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5705244|PMID:24835669) Ensembl
MGI
PMID:24835669 GO_REF:0000107 MGI:5705244 NCBI chr16:32,130,254...32,146,114
Ensembl chr16:32,142,034...32,148,335
JBrowse link
G PHF19 PHD finger protein 19 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:260,899,462...260,919,776
Ensembl chr 1:260,899,450...260,920,111
JBrowse link
G POU5F1 POU class 5 homeobox 1 acts_upstream_of_or_within
involved_in
ISO (MGI:2678871|PMID:14502573), (MGI:3654397|PMID:16767105), (MGI:4833901|PMID:20720539)
(MGI:5476873|PMID:23376973)
(MGI:1314760|PMID:9814708)
MGI
UniProt
PMID:9814708 PMID:14502573 PMID:16767105 PMID:20720539 PMID:23376973 MGI:1314760 MGI:2678871 MGI:3654397 MGI:4833901 MGI:5476873 NCBI chr 7:23,564,654...23,570,691 JBrowse link
G PRDM14 PR/SET domain 14 acts_upstream_of_or_within ISO (MGI:5548017|PMID:24268575) MGI PMID:24268575 MGI:5548017 NCBI chr 4:65,273,988...65,295,362
Ensembl chr 4:65,274,003...65,295,600
JBrowse link
G PRDM16 PR/SET domain 16 acts_upstream_of_or_within ISO (MGI:5582980|PMID:24703692) MGI PMID:24703692 MGI:5582980 NCBI chr 6:64,704,181...65,012,580
Ensembl chr 6:64,704,468...65,012,575
JBrowse link
G RIF1 replication timing regulatory factor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3621412|PMID:16518401) Ensembl
MGI
PMID:16518401 GO_REF:0000107 MGI:3621412 NCBI chr15:769,518...832,036
Ensembl chr15:774,189...832,010
JBrowse link
G RTF1 RTF1 homolog, Paf1/RNA polymerase II complex component involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:129,886,798...129,942,845
Ensembl chr 1:129,886,800...129,942,982
JBrowse link
G SALL4 spalt like transcription factor 4 acts_upstream_of_or_within ISO (MGI:4833901|PMID:20720539) MGI PMID:20720539 MGI:4833901 NCBI chr17:53,082,610...53,103,023
Ensembl chr17:52,936,173...53,103,190
JBrowse link
G SETD1A SET domain containing 1A, histone lysine methyltransferase acts_upstream_of_or_within ISO (MGI:5563281|PMID:24550110) MGI PMID:24550110 MGI:5563281 NCBI chr 3:17,463,768...17,490,397
Ensembl chr 3:17,463,768...17,488,594
JBrowse link
G SETD6 SET domain containing 6, protein lysine methyltransferase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:20,266,540...20,270,709
Ensembl chr 6:20,266,552...20,274,658
JBrowse link
G SMARCA4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 acts_upstream_of_or_within ISO (MGI:4454524|PMID:20176728) MGI PMID:20176728 MGI:4454524 NCBI chr 2:69,717,175...69,810,301
Ensembl chr 2:69,662,238...69,810,298
JBrowse link
G SMC1A structural maintenance of chromosomes 1A involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4833901|PMID:20720539) Ensembl
MGI
PMID:20720539 GO_REF:0000107 MGI:4833901 NCBI chr  X:46,143,738...46,202,187
Ensembl chr  X:46,144,920...46,220,378
JBrowse link
G SMC3 structural maintenance of chromosomes 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4833901|PMID:20720539) Ensembl
MGI
PMID:20720539 GO_REF:0000107 MGI:4833901 NCBI chr14:120,969,629...121,008,924
Ensembl chr14:120,969,632...121,008,924
JBrowse link
G SMC5 structural maintenance of chromosomes 5 acts_upstream_of_or_within ISO (MGI:5882483|PMID:26919979) MGI PMID:26919979 MGI:5882483 NCBI chr 1:223,560,271...223,653,370 JBrowse link
G SOX2 SRY-box transcription factor 2 involved_in
acts_upstream_of_or_within
ISO (MGI:5882869|PMID:23169531)
(MGI:3654397|PMID:16767105), (MGI:4833901|PMID:20720539)
UniProt
MGI
PMID:16767105 PMID:20720539 PMID:23169531 MGI:3654397 MGI:4833901 MGI:5882869 NCBI chr13:119,668,476...119,669,435 JBrowse link
G STAG2 stromal antigen 2 acts_upstream_of_or_within ISO (MGI:4833901|PMID:20720539) MGI PMID:20720539 MGI:4833901 NCBI chr  X:101,476,117...101,617,405
Ensembl chr  X:101,478,320...101,617,567
JBrowse link
G STAT3 signal transducer and activator of transcription 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4833901|PMID:20720539) Ensembl
MGI
PMID:20720539 GO_REF:0000107 MGI:4833901 NCBI chr12:20,407,316...20,471,091
Ensembl chr12:20,407,233...20,472,993
JBrowse link
G TBX3 T-box transcription factor 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3788969|PMID:18356246) Ensembl
MGI
PMID:18356246 GO_REF:0000107 MGI:3788969 NCBI chr14:37,582,704...37,596,767
Ensembl chr14:37,582,822...37,596,767
JBrowse link
G TCF15 transcription factor 15 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:34,626,682...34,632,881
Ensembl chr17:34,626,706...34,632,388
JBrowse link
G TCL1A TCL1 family AKT coactivator A acts_upstream_of_or_within ISO (MGI:3654397|PMID:16767105) MGI PMID:16767105 MGI:3654397 NCBI chr 7:116,933,785...116,939,353 JBrowse link
G TET1 tet methylcytosine dioxygenase 1 involved_in ISO (MGI:3844762|PMID:19372391) UniProt PMID:19372391 MGI:3844762 NCBI chr14:71,675,671...71,812,732
Ensembl chr14:71,675,671...71,815,621
JBrowse link
G TFAP2C transcription factor AP-2 gamma acts_upstream_of_or_within ISO (MGI:4454524|PMID:20176728) MGI PMID:20176728 MGI:4454524 NCBI chr17:57,164,400...57,174,923
Ensembl chr17:57,164,404...57,174,107
JBrowse link
G TPT1 tumor protein, translationally-controlled 1 involved_in ISO (MGI:4946164|PMID:21076177) BHF-UCL PMID:21076177 MGI:4946164 NCBI chr11:21,929,294...21,932,905
Ensembl chr11:21,929,176...21,933,786
JBrowse link
G TRIM8 tripartite motif containing 8 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5295924|PMID:21689689) Ensembl
MGI
PMID:21689689 GO_REF:0000107 MGI:5295924 NCBI chr14:113,637,437...113,652,577
Ensembl chr14:113,637,585...113,652,577
JBrowse link
G TUT4 terminal uridylyl transferase 4 involved_in ISO (PMID:19703396) UniProt PMID:19703396 NCBI chr 6:159,655,658...159,794,450
Ensembl chr 6:159,655,627...159,793,758
JBrowse link
germ-line stem cell population maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CREBBP CREB binding protein acts_upstream_of_or_within ISO (MGI:3763868|PMID:17936260) MGI PMID:17936260 MGI:3763868 NCBI chr 3:38,388,366...38,530,243
Ensembl chr 3:38,388,547...38,530,230
JBrowse link
G NANOS2 nanos C2HC-type zinc finger 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:52,218,889...52,219,834
Ensembl chr 6:52,219,418...52,219,834
JBrowse link
G PIWIL2 piwi like RNA-mediated gene silencing 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:6,560,402...6,632,524
Ensembl chr14:6,563,668...6,632,528
JBrowse link
G POU5F1 POU class 5 homeobox 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3525816|PMID:15486564) MGI
Ensembl
PMID:15486564 GO_REF:0000107 MGI:3525816 NCBI chr 7:23,564,654...23,570,691 JBrowse link
G PRDM14 PR/SET domain 14 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5506832|PMID:23670199) Ensembl
MGI
PMID:23670199 GO_REF:0000107 MGI:5506832 NCBI chr 4:65,273,988...65,295,362
Ensembl chr 4:65,274,003...65,295,600
JBrowse link
G TFAP2C transcription factor AP-2 gamma acts_upstream_of_or_within ISO (MGI:4421115|PMID:19776388) MGI PMID:19776388 MGI:4421115 NCBI chr17:57,164,400...57,174,923
Ensembl chr17:57,164,404...57,174,107
JBrowse link
male germ-line stem cell population maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G JMJD1C jumonji domain containing 1C acts_upstream_of_or_within ISO (MGI:5529185|PMID:24006281) MGI PMID:24006281 MGI:5529185 NCBI chr14:66,640,845...66,966,911
Ensembl chr14:66,640,849...66,967,077
JBrowse link
mesenchymal stem cell maintenance involved in metanephric nephron morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SALL1 spalt like transcription factor 1 acts_upstream_of_or_within ISO (MGI:5563280|PMID:24550112) MGI PMID:24550112 MGI:5563280 NCBI chr 6:33,731,666...33,748,698
Ensembl chr 6:33,732,016...33,748,704
JBrowse link
mesenchymal stem cell maintenance involved in nephron morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SIX2 SIX homeobox 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:95,460,046...95,463,428
Ensembl chr 3:95,459,937...95,464,066
JBrowse link
G WNT9B Wnt family member 9B involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4950307|PMID:21350016) Ensembl
MGI
PMID:21350016 GO_REF:0000107 MGI:4950307 NCBI chr12:17,709,046...17,733,434
Ensembl chr12:17,709,049...17,733,438
JBrowse link
negative regulation of mesenchymal cell apoptotic process involved in mesonephric nephron morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HNF1B HNF1 homeobox B involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4430439|PMID:20040500) Ensembl
MGI
PMID:20040500 GO_REF:0000107 MGI:4430439 NCBI chr12:39,143,119...39,201,631
Ensembl chr12:39,143,121...39,313,511
JBrowse link
negative regulation of mesenchymal cell apoptotic process involved in metanephric nephron morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PAX2 paired box 2 involved_in ISO (MGI:3704067|PMID:17314325) UniProt PMID:17314325 MGI:3704067 NCBI chr14:111,822,334...111,914,950
Ensembl chr14:111,834,168...111,914,304
JBrowse link
negative regulation of mesenchymal cell apoptotic process involved in nephron morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMP7 bone morphogenetic protein 7 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:86404|PMID:9056639) Ensembl
MGI
PMID:9056639 GO_REF:0000107 MGI:86404 NCBI chr17:57,567,770...57,676,516
Ensembl chr17:57,584,091...57,676,944
JBrowse link
negative regulation of stem cell population maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOXL2 lysyl oxidase like 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:7,435,861...7,540,699
Ensembl chr14:7,435,863...7,540,704
JBrowse link
G WNT9B Wnt family member 9B involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:17,709,046...17,733,434
Ensembl chr12:17,709,049...17,733,438
JBrowse link
G ZNF706 zinc finger protein 706 involved_in ISO (MGI:5640939|PMID:24412312) UniProt PMID:24412312 MGI:5640939 NCBI chr 4:35,768,087...35,777,048 JBrowse link
neuronal stem cell population maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASPM assembly factor for spindle microtubules acts_upstream_of_or_within ISO (MGI:4367118|PMID:19896444) MGI PMID:19896444 MGI:4367118 NCBI chr10:19,971,516...20,039,680
Ensembl chr10:19,975,189...20,039,623
JBrowse link
G CDH2 cadherin 2 involved_in ISO (MGI:5585327|PMID:24952463) UniProt PMID:24952463 MGI:5585327 NCBI chr 6:112,396,713...112,629,073
Ensembl chr 6:112,396,721...112,628,432
JBrowse link
G DLL1 delta like canonical Notch ligand 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:198,815...211,346
Ensembl chr 1:199,231...211,344
JBrowse link
G FANCC FA complementation group C acts_upstream_of_or_within ISO (MGI:5698336|PMID:24483844) MGI PMID:24483844 MGI:5698336 NCBI chr10:26,796,546...27,055,271 JBrowse link
G FANCD2 FA complementation group D2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5698336|PMID:24483844) Ensembl
MGI
PMID:24483844 GO_REF:0000107 MGI:5698336 NCBI chr13:66,241,951...66,308,601
Ensembl chr13:66,241,673...66,310,436
JBrowse link
G FOXO1 forkhead box O1 acts_upstream_of_or_within ISO (MGI:4367118|PMID:19896444) MGI PMID:19896444 MGI:4367118 NCBI chr11:15,317,222...15,410,059
Ensembl chr11:15,317,124...15,410,473
JBrowse link
G FOXO3 forkhead box O3 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4367118|PMID:19896444)
(MGI:5698336|PMID:24483844)
Ensembl
MGI
PMID:19896444 PMID:24483844 GO_REF:0000107 MGI:4367118 MGI:5698336 NCBI chr 1:74,626,673...74,760,323
Ensembl chr 1:74,628,217...74,760,328
JBrowse link
G FUT10 fucosyltransferase 10 acts_upstream_of_or_within ISO (MGI:5532797|PMID:23986452) MGI PMID:23986452 MGI:5532797
G HES1 hes family bHLH transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:131,135,970...131,137,865
Ensembl chr13:131,135,724...131,138,236
JBrowse link
G HES5 hes family bHLH transcription factor 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:64,409,110...64,410,541
Ensembl chr 6:64,409,115...64,411,006
JBrowse link
G HOOK3 hook microtubule tethering protein 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4457463|PMID:20152126) Ensembl
MGI
PMID:20152126 GO_REF:0000107 MGI:4457463 NCBI chr17:11,817,963...11,919,152
Ensembl chr17:11,817,987...11,924,884
JBrowse link
G IGF2BP1 insulin like growth factor 2 mRNA binding protein 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5554963|PMID:24192035) Ensembl
MGI
PMID:24192035 GO_REF:0000107 MGI:5554963 NCBI chr12:25,196,955...25,244,660
Ensembl chr12:25,196,969...25,243,272
JBrowse link
G JAG1 jagged canonical Notch ligand 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:19,591,248...19,629,659
Ensembl chr17:19,591,252...19,630,085
JBrowse link
G LOC100621006 RE1-silencing transcription factor-like involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:56,048,280...56,215,011
Ensembl chr 8:56,035,150...56,215,013
JBrowse link
G MAPK8 mitogen-activated protein kinase 8 acts_upstream_of_or_within ISO PMID:24388750 MGI PMID:24388750 RGD:10047173 NCBI chr14:88,988,914...89,108,875
Ensembl chr14:88,988,949...89,172,200
JBrowse link
G MCPH1 microcephalin 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5306866|PMID:21947081) Ensembl
MGI
PMID:21947081 GO_REF:0000107 MGI:5306866 NCBI chr15:37,455,186...37,674,971
Ensembl chr15:37,455,526...37,673,663
JBrowse link
G MMP24 matrix metallopeptidase 24 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:38,587,230...38,636,628
Ensembl chr17:38,588,137...38,636,631
JBrowse link
G NOTCH1 notch receptor 1 involved_in IEA Ensembl GO_REF:0000107
G PCM1 pericentriolar material 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4457463|PMID:20152126) Ensembl
MGI
PMID:20152126 GO_REF:0000107 MGI:4457463 NCBI chr17:5,596,926...5,705,752
Ensembl chr17:5,597,039...5,690,265
JBrowse link
G PROX1 prospero homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:129,527,704...129,583,693
Ensembl chr 9:129,532,164...129,580,979
JBrowse link
G PRRX1 paired related homeobox 1 acts_upstream_of_or_within ISO (MGI:5486509|PMID:23447615) MGI PMID:23447615 MGI:5486509 NCBI chr 4:80,427,682...80,502,689
Ensembl chr 4:80,427,685...80,501,646
JBrowse link
G REST RE1 silencing transcription factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:56,035,182...56,061,140
Ensembl chr 8:56,035,150...56,215,013
JBrowse link
G SCT secretin acts_upstream_of_or_within ISO (MGI:4939559|PMID:21159798) MGI PMID:21159798 MGI:4939559 NCBI chr 2:382,783...385,082
Ensembl chr 2:383,799...384,642
JBrowse link
G SOX2 SRY-box transcription factor 2 involved_in ISO (MGI:5306514|PMID:22198669) UniProt PMID:22198669 MGI:5306514 NCBI chr13:119,668,476...119,669,435 JBrowse link
G SRRT serrate, RNA effector molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:8,717,782...8,731,204
Ensembl chr 3:8,717,785...8,731,201
JBrowse link
G SS18 SS18 subunit of BAF chromatin remodeling complex involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5504306|PMID:23785148) Ensembl
MGI
PMID:23785148 GO_REF:0000107 MGI:5504306 NCBI chr 6:110,711,438...110,789,805
Ensembl chr 6:110,549,297...110,790,380
JBrowse link
positive regulation of somatic stem cell population maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LBH LBH regulator of WNT signaling pathway involved_in ISO (MGI:5634223|PMID:25655704) CAFA PMID:25655704 MGI:5634223 NCBI chr 3:109,078,285...109,113,536 JBrowse link
G TP63 tumor protein p63 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:127,115,990...127,347,082
Ensembl chr13:127,116,104...127,347,075
JBrowse link
positive regulation of stem cell population maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ESRRB estrogen related receptor beta involved_in ISO (MGI:5468900|PMID:23040478), (MGI:5882870|PMID:23040477)
(MGI:5440110|PMID:23019124), (MGI:5887187|PMID:26206133)
UniProt PMID:23019124 PMID:23040477 PMID:23040478 PMID:26206133 MGI:5440110 MGI:5468900 MGI:5882870 MGI:5887187 NCBI chr 7:99,511,135...99,699,478
Ensembl chr 7:99,514,168...99,699,011
JBrowse link
G KDM2B lysine demethylase 2B involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5433809|PMID:21540074) Ensembl
MGI
PMID:21540074 GO_REF:0000107 MGI:5433809 NCBI chr14:31,057,121...31,203,093
Ensembl chr14:31,057,121...31,203,092
JBrowse link
G LOC100621006 RE1-silencing transcription factor-like involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:56,048,280...56,215,011
Ensembl chr 8:56,035,150...56,215,013
JBrowse link
G NCOA3 nuclear receptor coactivator 3 involved_in ISO (MGI:5440110|PMID:23019124) UniProt PMID:23019124 MGI:5440110 NCBI chr17:49,528,275...49,660,471
Ensembl chr17:49,528,164...49,663,203
JBrowse link
G PRDM14 PR/SET domain 14 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:65,273,988...65,295,362
Ensembl chr 4:65,274,003...65,295,600
JBrowse link
G REST RE1 silencing transcription factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:56,035,182...56,061,140
Ensembl chr 8:56,035,150...56,215,013
JBrowse link
G TEAD1 TEA domain transcription factor 1 acts_upstream_of_or_within ISO (MGI:4455217|PMID:20516196) MGI PMID:20516196 MGI:4455217 NCBI chr 2:46,396,490...46,670,619
Ensembl chr 2:46,399,647...46,670,615
JBrowse link
G TEAD3 TEA domain transcription factor 3 acts_upstream_of_or_within ISO (MGI:4455217|PMID:20516196) MGI PMID:20516196 MGI:4455217 NCBI chr 7:31,337,890...31,351,452
Ensembl chr 7:31,336,560...31,361,835
JBrowse link
G TEAD4 TEA domain transcription factor 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4455217|PMID:20516196) Ensembl
MGI
PMID:20516196 GO_REF:0000107 MGI:4455217 NCBI chr 5:67,130,392...67,167,579
Ensembl chr 5:67,118,289...67,194,343
JBrowse link
G YAP1 Yes1 associated transcriptional regulator involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4455217|PMID:20516196) Ensembl
MGI
PMID:20516196 GO_REF:0000107 MGI:4455217 NCBI chr 9:32,811,629...32,924,926
Ensembl chr 9:32,811,416...32,925,603
JBrowse link
G ZNF322 zinc finger protein 322 involved_in ISO (MGI:6114965|PMID:24550733) UniProt PMID:24550733 MGI:6114965 NCBI chr 7:21,128,040...21,143,404
Ensembl chr 7:21,127,853...21,143,387
JBrowse link
regulation of somatic stem cell population maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MYC MYC proto-oncogene, bHLH transcription factor involved_in ISS UniProt GO_REF:0000024 NCBI chr 4:12,455,141...12,460,360
Ensembl chr 4:12,455,119...12,461,078
JBrowse link
G TAF5L TATA-box binding protein associated factor 5 like involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:60,254,502...60,286,368
Ensembl chr14:60,223,432...60,302,958
JBrowse link
G TAF6L TATA-box binding protein associated factor 6 like involved_in ISO (MGI:6323493|PMID:31005419) UniProt PMID:31005419 MGI:6323493 NCBI chr 2:8,983,823...8,999,990
Ensembl chr 2:8,983,825...9,000,122
JBrowse link
regulation of stem cell population maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CNOT1 CCR4-NOT transcription complex subunit 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:20,271,593...20,372,300
Ensembl chr 6:20,271,596...20,372,280
JBrowse link
G CNOT2 CCR4-NOT transcription complex subunit 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:34,470,911...34,548,968
Ensembl chr 5:34,426,394...34,549,313
JBrowse link
G CNOT3 CCR4-NOT transcription complex subunit 3 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:55,975,628...55,993,140
Ensembl chr 6:55,973,591...55,991,287
JBrowse link
G ELAVL1 ELAV like RNA binding protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:71,207,141...71,245,863
Ensembl chr 2:71,207,124...71,248,916
JBrowse link
G HMGA2 high mobility group AT-hook 2 involved_in ISO (PMID:17624332) UniProt PMID:17624332 NCBI chr 5:30,188,521...30,329,635 JBrowse link
G KAT2A lysine acetyltransferase 2A involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:20,638,493...20,647,464
Ensembl chr12:20,638,493...20,647,463
JBrowse link
G KDM3A lysine demethylase 3A involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3759699|PMID:17938240) Ensembl
MGI
PMID:17938240 GO_REF:0000107 MGI:3759699 NCBI chr 3:58,300,109...58,355,000
Ensembl chr 3:58,299,706...58,354,941
JBrowse link
G NCOA3 nuclear receptor coactivator 3 acts_upstream_of_or_within ISO (MGI:5467164|PMID:22977234) MGI PMID:22977234 MGI:5467164 NCBI chr17:49,528,275...49,660,471
Ensembl chr17:49,528,164...49,663,203
JBrowse link
G NFYA nuclear transcription factor Y subunit alpha acts_upstream_of_or_within ISO (MGI:5474438|PMID:22969033) MGI PMID:22969033 MGI:5474438 NCBI chr 7:36,385,677...36,409,495
Ensembl chr 7:36,385,873...36,409,495
JBrowse link
G PTN pleiotrophin involved_in IEA
ISS
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr18:12,219,708...12,309,045
Ensembl chr18:12,219,790...12,311,922
JBrowse link
G SAV1 salvador family WW domain containing protein 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3785211|PMID:18369314) Ensembl
MGI
PMID:18369314 GO_REF:0000107 MGI:3785211 NCBI chr 1:180,404,871...180,434,458
Ensembl chr 1:180,395,544...180,434,384
JBrowse link
G SMO smoothened, frizzled class receptor involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3696007|PMID:17199044) Ensembl
MGI
PMID:17199044 GO_REF:0000107 MGI:3696007 NCBI chr18:19,450,730...19,478,796
Ensembl chr18:19,450,734...19,479,374
JBrowse link
G TAL1 TAL bHLH transcription factor 1, erythroid differentiation factor involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4421485|PMID:19850742) Ensembl
MGI
PMID:19850742 GO_REF:0000107 MGI:4421485 NCBI chr 6:164,282,242...164,297,636
Ensembl chr 6:164,281,737...164,297,637
JBrowse link
G TCF7L1 transcription factor 7 like 1 acts_upstream_of_or_within ISO (MGI:3777490|PMID:18347094), (MGI:3804326|PMID:18467660) MGI PMID:18347094 PMID:18467660 MGI:3777490 MGI:3804326 NCBI chr 3:59,438,152...59,458,988 JBrowse link
G TCL1A TCL1 family AKT coactivator A acts_upstream_of_or_within ISO (MGI:3759699|PMID:17938240) MGI PMID:17938240 MGI:3759699 NCBI chr 7:116,933,785...116,939,353 JBrowse link
G WDR43 WD repeat domain 43 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:110,317,549...110,365,108
Ensembl chr 3:110,231,955...110,365,062
JBrowse link
G ZC3H13 zinc finger CCCH-type containing 13 involved_in ISO (MGI:6158697|PMID:29547716) UniProt PMID:29547716 MGI:6158697 NCBI chr11:21,298,855...21,387,557
Ensembl chr11:21,298,855...21,387,972
JBrowse link
somatic stem cell population maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APC APC regulator of WNT signaling pathway acts_upstream_of_or_within ISO (MGI:50403|PMID:1541640) MGI PMID:1541640 MGI:50403 NCBI chr 2:116,913,354...116,985,303
Ensembl chr 2:116,812,582...117,034,912
JBrowse link
G ASCL2 achaete-scute family bHLH transcription factor 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3846269|PMID:19269367) Ensembl
MGI
PMID:19269367 GO_REF:0000107 MGI:3846269 NCBI chr 2:1,558,459...1,560,112
Ensembl chr 2:1,558,459...1,560,112
JBrowse link
G BCL9 BCL9 transcription coactivator involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4819869|PMID:20682801) Ensembl
MGI
PMID:20682801 GO_REF:0000107 MGI:4819869 NCBI chr 4:99,970,388...100,058,291
Ensembl chr 4:99,970,395...100,058,188
JBrowse link
G BCL9L BCL9 like involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4819869|PMID:20682801) Ensembl
MGI
PMID:20682801 GO_REF:0000107 MGI:4819869 NCBI chr 9:46,146,519...46,175,052
Ensembl chr 9:46,146,514...46,174,589
JBrowse link
G BRAF B-Raf proto-oncogene, serine/threonine kinase involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5487489|PMID:23022482) Ensembl
MGI
PMID:23022482 GO_REF:0000107 MGI:5487489 NCBI chr18:8,957,963...9,132,558
Ensembl chr18:8,957,959...9,132,553
JBrowse link
G CDX2 caudal type homeobox 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3612803|PMID:16325584)
(MGI:4819480|PMID:20404091)
Ensembl
MGI
PMID:16325584 PMID:20404091 GO_REF:0000107 MGI:3612803 MGI:4819480 NCBI chr11:5,339,727...5,346,081
Ensembl chr11:5,339,716...5,346,057
JBrowse link
G CUL4A cullin 4A involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3839083|PMID:17616641) Ensembl
MGI
PMID:17616641 GO_REF:0000107 MGI:3839083 NCBI chr11:78,557,030...78,588,964
Ensembl chr11:78,557,070...78,589,194
JBrowse link
G ELF5 E74 like ETS transcription factor 5 acts_upstream_of_or_within ISO (MGI:5604337|PMID:24859262) MGI PMID:24859262 MGI:5604337 NCBI chr 2:26,443,979...26,486,802
Ensembl chr 2:26,443,963...26,485,903
JBrowse link
G FGF10 fibroblast growth factor 10 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2159281|PMID:11880361) Ensembl
MGI
PMID:11880361 GO_REF:0000107 MGI:2159281 NCBI chr16:28,695,465...28,779,953
Ensembl chr16:28,695,469...28,777,541
JBrowse link
G FGFR3 fibroblast growth factor receptor 3 acts_upstream_of_or_within ISO (MGI:4352984|PMID:19407216) MGI PMID:19407216 MGI:4352984 NCBI chr 8:879,151...894,968
Ensembl chr 8:879,151...895,912
JBrowse link
G GATA2 GATA binding protein 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3589329|PMID:16082385) Ensembl
MGI
PMID:16082385 GO_REF:0000107 MGI:3589329 NCBI chr13:71,981,139...71,997,626
Ensembl chr13:71,984,063...71,997,622
JBrowse link
G HES1 hes family bHLH transcription factor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:1351379|PMID:10615124) Ensembl
MGI
PMID:10615124 GO_REF:0000107 MGI:1351379 NCBI chr13:131,135,970...131,137,865
Ensembl chr13:131,135,724...131,138,236
JBrowse link
G HMGA2 high mobility group AT-hook 2 acts_upstream_of_or_within ISO (MGI:3829847|PMID:18957199) MGI PMID:18957199 MGI:3829847 NCBI chr 5:30,188,521...30,329,635 JBrowse link
G KAT6A lysine acetyltransferase 6A acts_upstream_of_or_within ISO (MGI:3624066|PMID:16651658)
(MGI:3624570|PMID:16702405)
MGI PMID:16651658 PMID:16702405 MGI:3624066 MGI:3624570 NCBI chr17:11,002,818...11,109,974 JBrowse link
G KIT KIT proto-oncogene, receptor tyrosine kinase ISO neural stem cells from the ciliary epithelium of the eye RGD PMID:15302600 RGD:2292509 NCBI chr 8:41,402,334...41,492,306
Ensembl chr 8:41,402,043...41,493,735
JBrowse link
G KLF10 Kruppel like factor 10 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3850801|PMID:19379700) Ensembl
MGI
PMID:19379700 GO_REF:0000107 MGI:3850801 NCBI chr 4:34,430,132...34,435,990
Ensembl chr 4:34,421,359...34,436,009
JBrowse link
G LDB1 LIM domain binding 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3768693|PMID:17991461) Ensembl
MGI
PMID:17991461 GO_REF:0000107 MGI:3768693 NCBI chr14:113,114,302...113,126,455
Ensembl chr14:113,113,177...113,126,819
JBrowse link
G LDB2 LIM domain binding 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3768693|PMID:17991461) Ensembl
MGI
PMID:17991461 GO_REF:0000107 MGI:3768693 NCBI chr 8:11,641,060...12,037,388
Ensembl chr 8:11,641,060...12,037,265
JBrowse link
G LIG4 DNA ligase 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3715270|PMID:17554302) Ensembl
MGI
PMID:17554302 GO_REF:0000107 MGI:3715270 NCBI chr11:75,537,027...75,547,711
Ensembl chr11:75,537,032...75,547,691
JBrowse link
G LOC100621006 RE1-silencing transcription factor-like involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:56,048,280...56,215,011
Ensembl chr 8:56,035,150...56,215,013
JBrowse link
G LRP5 LDL receptor related protein 5 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4358817|PMID:19672307) Ensembl
MGI
PMID:19672307 GO_REF:0000107 MGI:4358817 NCBI chr 2:4,533,721...4,653,997
Ensembl chr 2:4,533,593...4,653,945
JBrowse link
G NANOG Nanog homeobox involved_in ISO (PMID:18388306) UniProt PMID:18388306 NCBI chr 5:62,931,642...62,939,086
Ensembl chr 5:62,932,382...62,939,082
JBrowse link
G NOG noggin involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:32,891,321...32,892,206
Ensembl chr12:32,891,321...32,892,206
JBrowse link
G NR2E1 nuclear receptor subfamily 2 group E member 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3806374|PMID:18794344)
(MGI:2686847|PMID:14702088)
(MGI:3527227|PMID:12527005)
Ensembl
MGI
PMID:12527005 PMID:14702088 PMID:18794344 GO_REF:0000107 MGI:2686847 MGI:3527227 MGI:3806374 NCBI chr 1:74,266,667...74,292,686
Ensembl chr 1:74,271,042...74,292,681
JBrowse link
G P14ARF p14ARF protein acts_upstream_of_or_within ISO (MGI:3829847|PMID:18957199) MGI PMID:18957199 MGI:3829847 NCBI chr 1:200,774,496...200,799,149
Ensembl chr 1:200,774,496...200,798,854
JBrowse link
G PLA2G2A phospholipase A2 group IIA acts_upstream_of_or_within ISO (MGI:50403|PMID:1541640) MGI PMID:1541640 MGI:50403 NCBI chr 6:78,327,728...78,339,546
Ensembl chr 6:78,327,319...78,330,699
JBrowse link
G POU5F1 POU class 5 homeobox 1 involved_in ISO (PMID:19409607)
(PMID:18388306), (PMID:19736317)
UniProt PMID:18388306 PMID:19409607 PMID:19736317 NCBI chr 7:23,564,654...23,570,691 JBrowse link
G PRDM16 PR/SET domain 16 acts_upstream_of_or_within ISO (MGI:3850801|PMID:19379700) MGI PMID:19379700 MGI:3850801 NCBI chr 6:64,704,181...65,012,580
Ensembl chr 6:64,704,468...65,012,575
JBrowse link
G RAF1 Raf-1 proto-oncogene, serine/threonine kinase involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5487489|PMID:23022482) Ensembl
MGI
PMID:23022482 GO_REF:0000107 MGI:5487489 NCBI chr13:68,581,128...68,657,911
Ensembl chr13:68,580,812...68,657,829
JBrowse link
G RBPJ recombination signal binding protein for immunoglobulin kappa J region involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5292802|PMID:21402740) Ensembl
MGI
PMID:21402740 GO_REF:0000107 MGI:5292802 NCBI chr 8:19,933,035...20,166,746
Ensembl chr 8:19,922,779...20,166,755
JBrowse link
G REST RE1 silencing transcription factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:56,035,182...56,061,140
Ensembl chr 8:56,035,150...56,215,013
JBrowse link
G SFRP1 secreted frizzled related protein 1 acts_upstream_of_or_within ISO (MGI:4356203|PMID:19664990) MGI PMID:19664990 MGI:4356203 NCBI chr17:10,436,414...10,489,773
Ensembl chr17:10,436,426...10,489,748
JBrowse link
G SKI SKI proto-oncogene acts_upstream_of_or_within ISO (MGI:3850801|PMID:19379700) MGI PMID:19379700 MGI:3850801 NCBI chr 6:64,188,265...64,242,596
Ensembl chr 6:64,188,029...64,241,556
JBrowse link
G SOX2 SRY-box transcription factor 2 involved_in ISO (PMID:19409607)
(PMID:18388306), (PMID:19736317)
UniProt
BHF-UCL
PMID:18388306 PMID:19409607 PMID:19736317 NCBI chr13:119,668,476...119,669,435 JBrowse link
G SOX4 SRY-box transcription factor 4 acts_upstream_of_or_within ISO (MGI:3850801|PMID:19379700) MGI PMID:19379700 MGI:3850801 NCBI chr 7:16,886,834...16,895,488 JBrowse link
G SOX9 SRY-box transcription factor 9 involved_in
acts_upstream_of_or_within
ISS
ISO
IEA
(MGI:4836759|PMID:20871603) UniProt
MGI
Ensembl
PMID:20871603 GO_REF:0000024 GO_REF:0000107 MGI:4836759 NCBI chr12:8,642,154...8,647,315
Ensembl chr12:8,642,158...8,647,315
JBrowse link
G SPI1 Spi-1 proto-oncogene involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3850801|PMID:19379700) Ensembl
MGI
PMID:19379700 GO_REF:0000107 MGI:3850801 NCBI chr 2:15,227,850...15,245,679
Ensembl chr 2:15,227,829...15,245,667
JBrowse link
G TCF7L1 transcription factor 7 like 1 acts_upstream_of_or_within ISO (MGI:4412144|PMID:19718027) MGI PMID:19718027 MGI:4412144 NCBI chr 3:59,438,152...59,458,988 JBrowse link
G TCF7L2 transcription factor 7 like 2 acts_upstream_of_or_within ISO (MGI:1276271|PMID:9697701), (MGI:1330442|PMID:10027409), (MGI:3841508|PMID:19251639)
(MGI:4412144|PMID:19718027)
MGI PMID:9697701 PMID:10027409 PMID:19251639 PMID:19718027 MGI:1276271 MGI:1330442 MGI:3841508 MGI:4412144 NCBI chr14:123,343,695...123,547,332
Ensembl chr14:123,343,694...123,546,417
JBrowse link
G TFAP2C transcription factor AP-2 gamma acts_upstream_of_or_within ISO (MGI:4819480|PMID:20404091) MGI PMID:20404091 MGI:4819480 NCBI chr17:57,164,400...57,174,923
Ensembl chr17:57,164,404...57,174,107
JBrowse link
G VANGL2 VANGL planar cell polarity protein 2 acts_upstream_of_or_within ISO (MGI:3849215|PMID:19497282) MGI PMID:19497282 MGI:3849215 NCBI chr 4:90,051,994...90,080,701
Ensembl chr 4:90,053,380...90,080,656
JBrowse link
G VPS72 vacuolar protein sorting 72 homolog involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3850801|PMID:19379700) Ensembl
MGI
PMID:19379700 GO_REF:0000107 MGI:3850801 NCBI chr 4:98,062,261...98,074,074
Ensembl chr 4:98,062,256...98,074,059
JBrowse link
G WNT7A Wnt family member 7A acts_upstream_of_or_within ISO (MGI:3849215|PMID:19497282) MGI PMID:19497282 MGI:3849215 NCBI chr13:70,538,802...70,602,464
Ensembl chr13:70,538,894...70,602,455
JBrowse link
G YAP1 Yes1 associated transcriptional regulator involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3818355|PMID:17980593) Ensembl
MGI
PMID:17980593 GO_REF:0000107 MGI:3818355 NCBI chr 9:32,811,629...32,924,926
Ensembl chr 9:32,811,416...32,925,603
JBrowse link
G ZFP36L2 ZFP36 ring finger protein like 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:97,200,395...97,203,094
Ensembl chr 3:97,200,406...97,204,700
JBrowse link
G ZHX2 zinc fingers and homeoboxes 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3849211|PMID:19515908) Ensembl
MGI
PMID:19515908 GO_REF:0000107 MGI:3849211 NCBI chr 4:16,374,900...16,553,859
Ensembl chr 4:16,374,900...16,553,012
JBrowse link

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