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ONTOLOGY REPORT - ANNOTATIONS


Term:stem cell population maintenance
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Accession:GO:0019827 term browser browse the term
Definition:The process by which an organism or tissue maintains a population of stem cells of a single type. This can be achieved by a number of mechanisms: stem cell asymmetric division maintains stem cell numbers; stem cell symmetric division increases them; maintenance of a stem cell niche maintains the conditions for commitment to the stem cell fate for some types of stem cell; stem cells may arise de novo from other cell types.
Synonyms:related_synonym: maintenance of pluripotency



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stem cell population maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APC APC regulator of WNT signaling pathway acts_upstream_of_or_within ISO (MGI:3806418|PMID:18725524) MGI PMID:18725524 MGI:3806418 NCBI chr 3:252,052...380,506
Ensembl chr 3:253,081...322,993
JBrowse link
G ARID1A AT-rich interaction domain 1A acts_upstream_of_or_within ISO (MGI:3789431|PMID:18448678) MGI PMID:18448678 MGI:3789431 NCBI chr 2:73,331,606...73,401,151
Ensembl chr 2:73,324,852...73,401,102
JBrowse link
G BMPR1A bone morphogenetic protein receptor type 1A involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3722226|PMID:17699604) Ensembl
MGI
PMID:17699604 GO_REF:0000107 MGI:3722226 NCBI chr 4:34,499,898...34,582,481
Ensembl chr 4:34,517,492...34,578,923
JBrowse link
G CDC73 cell division cycle 73 involved_in ISO (MGI:3849235|PMID:19345177) UniProt PMID:19345177 MGI:3849235 NCBI chr38:5,826,209...5,937,930
Ensembl chr38:5,805,916...5,938,111
JBrowse link
G CTR9 CTR9 homolog, Paf1/RNA polymerase II complex component involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:33,915,804...33,949,597
Ensembl chr21:33,915,772...33,949,103
JBrowse link
G DDX6 DEAD-box helicase 6 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5614138|PMID:25456498) Ensembl
MGI
PMID:25456498 GO_REF:0000107 MGI:5614138 NCBI chr 5:15,001,988...15,034,128
Ensembl chr 5:15,002,246...15,032,348
JBrowse link
G DICER1 dicer 1, ribonuclease III acts_upstream_of_or_within ISO (MGI:2679763|PMID:14528307) MGI PMID:14528307 MGI:2679763 NCBI chr 8:63,970,245...64,029,438
Ensembl chr 8:63,972,027...64,019,879
JBrowse link
G DIS3L2 DIS3 like 3'-5' exoribonuclease 2 involved_in ISO (MGI:5494337|PMID:23594738) UniProt PMID:23594738 MGI:5494337 NCBI chr25:43,754,382...44,099,497
Ensembl chr25:43,754,484...44,095,381
JBrowse link
G EIF4E eukaryotic translation initiation factor 4E acts_upstream_of_or_within ISO (MGI:5614138|PMID:25456498) MGI PMID:25456498 MGI:5614138 NCBI chr32:21,064,202...21,108,998
Ensembl chr32:21,065,270...21,124,483
JBrowse link
G EIF4ENIF1 eukaryotic translation initiation factor 4E nuclear import factor 1 acts_upstream_of_or_within ISO (MGI:5614138|PMID:25456498) MGI PMID:25456498 MGI:5614138 NCBI chr26:24,355,326...24,403,306
Ensembl chr26:24,355,826...24,402,827
JBrowse link
G EOMES eomesodermin acts_upstream_of_or_within ISO (MGI:4454524|PMID:20176728) MGI PMID:20176728 MGI:4454524 NCBI chr23:16,476,498...16,512,406
Ensembl chr23:16,506,032...16,511,527
JBrowse link
G ESRRB estrogen related receptor beta acts_upstream_of_or_within
involved_in
ISO (MGI:3621412|PMID:16518401), (MGI:3654397|PMID:16767105), (MGI:4833901|PMID:20720539)
(MGI:5882869|PMID:23169531)
(MGI:5882883|PMID:18957414)
(PMID:25522312)
MGI
UniProt
PMID:16518401 PMID:16767105 PMID:18957414 PMID:20720539 PMID:23169531 More... MGI:3621412 MGI:3654397 MGI:4833901 MGI:5882869 MGI:5882883 NCBI chr 8:49,253,877...49,424,148
Ensembl chr 8:49,253,332...49,421,332
JBrowse link
G FGF4 fibroblast growth factor 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3052627|PMID:15328412) Ensembl
MGI
PMID:15328412 GO_REF:0000107 MGI:3052627 NCBI chr18:48,413,480...48,417,494
Ensembl chr18:48,413,187...48,416,977
JBrowse link
G FGFR1 fibroblast growth factor receptor 1 ISO RGD PMID:19505325 RGD:2325177 NCBI chr16:27,029,902...27,080,514
Ensembl chr16:27,031,588...27,078,261
JBrowse link
G FZD7 frizzled class receptor 7 involved_in ISO (PMID:18681827) BHF-UCL PMID:18681827 NCBI chr37:11,054,572...11,061,173
Ensembl chr37:11,053,521...11,060,821
JBrowse link
G GNL3 G protein nucleolar 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:37,103,298...37,110,350
Ensembl chr20:37,103,320...37,110,207
JBrowse link
G HESX1 HESX homeobox 1 acts_upstream_of_or_within ISO (MGI:6478093|PMID:26188092) MGI PMID:26188092 MGI:6478093 NCBI chr20:33,193,813...33,197,226
Ensembl chr20:33,195,123...33,196,601
JBrowse link
G KDM4C lysine demethylase 4C acts_upstream_of_or_within ISO (MGI:3759699|PMID:17938240) MGI PMID:17938240 MGI:3759699 NCBI chr11:27,662,764...28,101,432
Ensembl chr11:27,693,536...28,101,801
JBrowse link
G KLF4 Kruppel like factor 4 acts_upstream_of_or_within
involved_in
ISO (MGI:3530919|PMID:15358627)
(MGI:4887542|PMID:19816951)
MGI
UniProt
PMID:15358627 PMID:19816951 MGI:3530919 MGI:4887542 NCBI chr11:62,881,840...62,886,676
Ensembl chr11:62,882,767...62,928,251
JBrowse link
G LEO1 LEO1 homolog, Paf1/RNA polymerase II complex component involved_in ISO (PMID:19345177)
(MGI:3849235|PMID:19345177)
UniProt PMID:19345177 MGI:3849235 NCBI chr30:17,614,502...17,651,715
Ensembl chr30:17,598,076...17,651,290
JBrowse link
G LIF LIF interleukin 6 family cytokine involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3530919|PMID:15358627) Ensembl
MGI
PMID:15358627 GO_REF:0000107 MGI:3530919 NCBI chr26:23,400,226...23,418,538
Ensembl chr26:23,403,364...23,406,851
JBrowse link
G LIN28A lin-28 homolog A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:73,638,438...73,656,841
Ensembl chr 2:73,614,531...73,628,211
Ensembl chr 2:73,614,531...73,628,211
JBrowse link
G LOC106559800 developmental pluripotency-associated protein 2-like acts_upstream_of_or_within ISO (MGI:4887319|PMID:19846433) MGI PMID:19846433 MGI:4887319 NCBI chr16:18,551,215...18,552,780 JBrowse link
G LSM1 LSM1 homolog, mRNA degradation associated involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5614138|PMID:25456498) Ensembl
MGI
PMID:25456498 GO_REF:0000107 MGI:5614138 NCBI chr16:27,304,257...27,315,389
Ensembl chr16:27,304,198...27,315,233
JBrowse link
G MED10 mediator complex subunit 10 acts_upstream_of_or_within ISO (MGI:4833901|PMID:20720539) MGI PMID:20720539 MGI:4833901 NCBI chr34:7,327,370...7,334,833 JBrowse link
G MED12 mediator complex subunit 12 acts_upstream_of_or_within ISO (MGI:4833901|PMID:20720539) MGI PMID:20720539 MGI:4833901 NCBI chr  X:55,487,629...55,508,941
Ensembl chr  X:55,482,013...55,509,992
JBrowse link
G MED14 mediator complex subunit 14 acts_upstream_of_or_within ISO (MGI:4833901|PMID:20720539) MGI PMID:20720539 MGI:4833901 NCBI chr  X:35,125,270...35,191,260
Ensembl chr  X:35,125,774...35,191,122
JBrowse link
G MED15 mediator complex subunit 15 acts_upstream_of_or_within ISO (MGI:4833901|PMID:20720539) MGI PMID:20720539 MGI:4833901 NCBI chr26:30,299,424...30,368,460
Ensembl chr26:30,299,442...30,367,572
JBrowse link
G MED17 mediator complex subunit 17 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4833901|PMID:20720539) Ensembl
MGI
PMID:20720539 GO_REF:0000107 MGI:4833901 NCBI chr21:6,967,304...6,990,542
Ensembl chr21:6,967,481...6,990,547
JBrowse link
G MED21 mediator complex subunit 21 acts_upstream_of_or_within ISO (MGI:4833901|PMID:20720539) MGI PMID:20720539 MGI:4833901 NCBI chr27:20,611,263...20,619,215
Ensembl chr27:20,612,295...20,619,130
JBrowse link
G MED24 mediator complex subunit 24 acts_upstream_of_or_within ISO (MGI:4833901|PMID:20720539) MGI PMID:20720539 MGI:4833901 NCBI chr 9:22,500,937...22,528,262
Ensembl chr 9:22,501,070...22,527,843
JBrowse link
G MED27 mediator complex subunit 27 acts_upstream_of_or_within ISO (MGI:4833901|PMID:20720539) MGI PMID:20720539 MGI:4833901 NCBI chr 9:52,136,652...52,331,676
Ensembl chr 9:52,136,698...52,328,998
JBrowse link
G MED28 mediator complex subunit 28 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4833901|PMID:20720539) Ensembl
MGI
PMID:20720539 GO_REF:0000107 MGI:4833901 NCBI chr 3:62,887,095...62,895,588
Ensembl chr 3:62,890,515...62,895,562
JBrowse link
G MED30 mediator complex subunit 30 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4833901|PMID:20720539) Ensembl
MGI
PMID:20720539 GO_REF:0000107 MGI:4833901 NCBI chr13:16,928,166...16,949,503
Ensembl chr13:16,928,161...16,949,295
JBrowse link
G MED6 mediator complex subunit 6 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4833901|PMID:20720539) Ensembl
MGI
PMID:20720539 GO_REF:0000107 MGI:4833901 NCBI chr 8:44,301,449...44,323,554
Ensembl chr 8:44,301,297...44,323,483
JBrowse link
G MED7 mediator complex subunit 7 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4833901|PMID:20720539) Ensembl
MGI
PMID:20720539 GO_REF:0000107 MGI:4833901 NCBI chr 4:52,998,748...53,004,063
Ensembl chr 4:52,998,748...53,004,063
JBrowse link
G METTL14 methyltransferase 14, N6-adenosine-methyltransferase subunit involved_in ISO (MGI:5559905|PMID:24394384) UniProt PMID:24394384 MGI:5559905 NCBI chr32:37,653,163...37,679,577
Ensembl chr32:37,653,035...37,678,398
JBrowse link
G METTL3 methyltransferase 3, N6-adenosine-methyltransferase complex catalytic subunit involved_in ISO (MGI:5559905|PMID:24394384), (MGI:5621227|PMID:25569111), (MGI:5621254|PMID:25456834) UniProt PMID:24394384 PMID:25456834 PMID:25569111 MGI:5559905 MGI:5621227 MGI:5621254 NCBI chr15:18,528,755...18,546,303
Ensembl chr15:18,528,772...18,546,531
JBrowse link
G MTF2 metal response element binding transcription factor 2 involved_in ISO (MGI:4429983|PMID:20144788) UniProt PMID:20144788 MGI:4429983 NCBI chr 6:55,950,814...56,010,935
Ensembl chr 6:55,951,279...56,010,886
JBrowse link
G NANOG Nanog homeobox involved_in
acts_upstream_of_or_within
ISO (PMID:15108323)
(MGI:5905240|PMID:25825768)
(MGI:3759699|PMID:17938240)
(MGI:3654397|PMID:16767105), (MGI:4833901|PMID:20720539)
(MGI:3654744|PMID:16801560)
(MGI:2661864|PMID:12787504)
RGD
BHF-UCL
UniProt
MGI
PMID:12787504 PMID:15108323 PMID:16767105 PMID:16801560 PMID:17938240 More... MGI:2661864 MGI:3654397 MGI:3654744 MGI:3759699 MGI:4833901 MGI:5905240 RGD:9589811 NCBI chr27:37,262,558...37,266,449 JBrowse link
G NIPBL NIPBL cohesin loading factor involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4833901|PMID:20720539) Ensembl
MGI
PMID:20720539 GO_REF:0000107 MGI:4833901 NCBI chr 4:71,583,118...71,780,986
Ensembl chr 4:71,583,732...71,780,852
JBrowse link
G NKAP NFKB activating protein acts_upstream_of_or_within ISO (MGI:4838711|PMID:20610818) MGI PMID:20610818 MGI:4838711 NCBI chr  X:91,922,326...91,956,566
Ensembl chr  X:91,923,550...91,956,414
JBrowse link
G NODAL nodal growth differentiation factor acts_upstream_of_or_within ISO (MGI:3057068|PMID:15505202)
(MGI:3640721|PMID:16678814)
MGI PMID:15505202 PMID:16678814 MGI:3057068 MGI:3640721 NCBI chr 4:21,366,828...21,374,623
Ensembl chr 4:21,367,583...21,375,151
JBrowse link
G PADI4 peptidyl arginine deiminase 4 involved_in ISO (MGI:5545819|PMID:24463520) UniProt PMID:24463520 MGI:5545819 NCBI chr 2:80,912,814...80,942,767
Ensembl chr 2:80,905,391...80,993,973
JBrowse link
G PAF1 PAF1 homolog, Paf1/RNA polymerase II complex component involved_in ISO (MGI:3849235|PMID:19345177) UniProt PMID:19345177 MGI:3849235 NCBI chr 1:113,828,219...113,832,747
Ensembl chr 1:113,828,007...113,832,735
JBrowse link
G PELO pelota mRNA surveillance and ribosome rescue factor acts_upstream_of_or_within ISO (MGI:5705244|PMID:24835669) MGI PMID:24835669 MGI:5705244 NCBI chr 4:62,440,923...62,443,598 JBrowse link
G PHF19 PHD finger protein 19 involved_in ISO (MGI:5318799|PMID:22438827) UniProt PMID:22438827 MGI:5318799 NCBI chr11:73,895,104...73,911,030 JBrowse link
G PRDM14 PR/SET domain 14 acts_upstream_of_or_within ISO (MGI:5548017|PMID:24268575) MGI PMID:24268575 MGI:5548017 NCBI chr29:19,203,798...19,220,149
Ensembl chr29:19,203,807...19,220,518
JBrowse link
G PRDM16 PR/SET domain 16 acts_upstream_of_or_within ISO (MGI:5582980|PMID:24703692) MGI PMID:24703692 MGI:5582980 NCBI chr 5:57,805,951...58,018,817
Ensembl chr 5:57,730,370...58,017,976
JBrowse link
G RIF1 replication timing regulatory factor 1 acts_upstream_of_or_within ISO (MGI:3621412|PMID:16518401) MGI PMID:16518401 MGI:3621412 NCBI chr19:52,661,278...52,711,969
Ensembl chr19:52,661,155...52,709,279
JBrowse link
G RTF1 RTF1 homolog, Paf1/RNA polymerase II complex component involved_in IEA Ensembl GO_REF:0000107 NCBI chr30:8,468,001...8,524,712
Ensembl chr30:8,467,761...8,522,874
JBrowse link
G SALL4 spalt like transcription factor 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4833901|PMID:20720539) Ensembl
MGI
PMID:20720539 GO_REF:0000107 MGI:4833901 NCBI chr24:37,941,498...37,959,713
Ensembl chr24:37,940,034...38,037,287
JBrowse link
G SETD1A SET domain containing 1A, histone lysine methyltransferase acts_upstream_of_or_within ISO (MGI:5563281|PMID:24550110) MGI PMID:24550110 MGI:5563281 NCBI chr 6:17,224,107...17,246,527
Ensembl chr 6:17,224,694...17,245,870
JBrowse link
G SETD6 SET domain containing 6, protein lysine methyltransferase involved_in ISO (MGI:5689089|PMID:23324626) UniProt PMID:23324626 MGI:5689089 NCBI chr 2:58,138,739...58,142,909
Ensembl chr 2:58,139,100...58,143,147
JBrowse link
G SMARCA4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 acts_upstream_of_or_within ISO (MGI:4454524|PMID:20176728) MGI PMID:20176728 MGI:4454524 NCBI chr20:50,175,489...50,268,865
Ensembl chr20:50,175,687...50,268,836
JBrowse link
G SMC1A structural maintenance of chromosomes 1A involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4833901|PMID:20720539) Ensembl
MGI
PMID:20720539 GO_REF:0000107 MGI:4833901 NCBI chr  X:45,099,312...45,148,103
Ensembl chr  X:45,109,653...45,148,001
JBrowse link
G SMC3 structural maintenance of chromosomes 3 acts_upstream_of_or_within ISO (MGI:4833901|PMID:20720539) MGI PMID:20720539 MGI:4833901 NCBI chr28:21,889,690...21,928,367
Ensembl chr28:21,889,662...21,928,034
JBrowse link
G SMC5 structural maintenance of chromosomes 5 acts_upstream_of_or_within ISO (MGI:5882483|PMID:26919979) MGI PMID:26919979 MGI:5882483 NCBI chr 1:87,192,988...87,285,678
Ensembl chr 1:87,194,867...87,285,606
JBrowse link
G SOX2 SRY-box transcription factor 2 acts_upstream_of_or_within
involved_in
ISO (MGI:3654397|PMID:16767105), (MGI:4833901|PMID:20720539)
(MGI:5882869|PMID:23169531)
MGI
UniProt
PMID:16767105 PMID:20720539 PMID:23169531 MGI:3654397 MGI:4833901 MGI:5882869 NCBI chr34:14,853,000...14,855,153 JBrowse link
G STAG2 stromal antigen 2 acts_upstream_of_or_within ISO (MGI:4833901|PMID:20720539) MGI PMID:20720539 MGI:4833901 NCBI chr  X:95,397,174...95,532,716
Ensembl chr  X:95,396,870...95,531,133
JBrowse link
G STAT3 signal transducer and activator of transcription 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4833901|PMID:20720539) Ensembl
MGI
PMID:20720539 GO_REF:0000107 MGI:4833901 NCBI chr 9:20,539,660...20,614,631
Ensembl chr 9:20,539,697...20,612,672
JBrowse link
G TBX3 T-box transcription factor 3 acts_upstream_of_or_within ISO (MGI:3788969|PMID:18356246) MGI PMID:18356246 MGI:3788969 NCBI chr26:11,694,885...11,709,594
Ensembl chr26:11,696,565...11,708,918
JBrowse link
G TCF15 transcription factor 15 involved_in IEA Ensembl GO_REF:0000107 NCBI chr24:20,274,113...20,281,081
Ensembl chr24:20,274,050...20,280,270
JBrowse link
G TCL1A TCL1 family AKT coactivator A acts_upstream_of_or_within ISO (MGI:3654397|PMID:16767105) MGI PMID:16767105 MGI:3654397
G TET1 tet methylcytosine dioxygenase 1 involved_in ISO (MGI:3844762|PMID:19372391) UniProt PMID:19372391 MGI:3844762 NCBI chr 4:19,759,661...19,898,345
Ensembl chr 4:19,768,137...19,889,907
JBrowse link
G TFAP2C transcription factor AP-2 gamma acts_upstream_of_or_within ISO (MGI:4454524|PMID:20176728) MGI PMID:20176728 MGI:4454524 NCBI chr24:41,787,477...41,797,446
Ensembl chr24:41,783,490...41,796,509
JBrowse link
G TPT1 tumor protein, translationally-controlled 1 involved_in ISO (MGI:4946164|PMID:21076177) BHF-UCL PMID:21076177 MGI:4946164 NCBI chr22:5,711,076...5,715,254
Ensembl chr22:5,711,071...5,715,069
JBrowse link
G TRIM8 tripartite motif containing 8 acts_upstream_of_or_within ISO (MGI:5295924|PMID:21689689) MGI PMID:21689689 MGI:5295924 NCBI chr28:15,124,310...15,138,660
Ensembl chr28:15,123,348...15,146,355
JBrowse link
G TUT4 terminal uridylyl transferase 4 involved_in ISO (PMID:19703396) UniProt PMID:19703396 NCBI chr15:8,832,208...8,958,136
Ensembl chr15:8,832,199...9,047,152
JBrowse link
germ-line stem cell population maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CREBBP CREB binding protein acts_upstream_of_or_within ISO (MGI:3763868|PMID:17936260) MGI PMID:17936260 MGI:3763868 NCBI chr 6:37,410,201...37,536,688
Ensembl chr 6:37,409,930...37,534,176
JBrowse link
G LOC481709 POU domain, class 5, transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:860,702...866,099 JBrowse link
G NANOS2 nanos C2HC-type zinc finger 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:109,716,634...109,717,701
Ensembl chr 1:109,716,699...109,717,115
JBrowse link
G PIWIL2 piwi like RNA-mediated gene silencing 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr25:34,911,120...34,987,287
Ensembl chr25:34,912,358...34,987,339
JBrowse link
G PRDM14 PR/SET domain 14 acts_upstream_of_or_within ISO (MGI:5506832|PMID:23670199) MGI PMID:23670199 MGI:5506832 NCBI chr29:19,203,798...19,220,149
Ensembl chr29:19,203,807...19,220,518
JBrowse link
G TFAP2C transcription factor AP-2 gamma acts_upstream_of_or_within ISO (MGI:4421115|PMID:19776388) MGI PMID:19776388 MGI:4421115 NCBI chr24:41,787,477...41,797,446
Ensembl chr24:41,783,490...41,796,509
JBrowse link
male germ-line stem cell population maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G JMJD1C jumonji domain containing 1C acts_upstream_of_or_within ISO (MGI:5529185|PMID:24006281) MGI PMID:24006281 MGI:5529185 NCBI chr 4:15,006,670...15,261,139
Ensembl chr 4:15,007,508...15,261,691
JBrowse link
mesenchymal stem cell maintenance involved in metanephric nephron morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SALL1 spalt like transcription factor 1 acts_upstream_of_or_within ISO (MGI:5563280|PMID:24550112) MGI PMID:24550112 MGI:5563280 NCBI chr 2:64,242,742...64,260,021
Ensembl chr 2:64,243,987...64,259,521
JBrowse link
mesenchymal stem cell maintenance involved in nephron morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SIX2 SIX homeobox 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:47,399,152...47,403,503
Ensembl chr10:47,400,034...47,403,509
JBrowse link
G WNT9B Wnt family member 9B involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4950307|PMID:21350016) Ensembl
MGI
PMID:21350016 GO_REF:0000107 MGI:4950307 NCBI chr 9:10,157,607...10,172,664
Ensembl chr 9:10,149,842...10,172,654
JBrowse link
negative regulation of mesenchymal cell apoptotic process involved in mesonephric nephron morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HNF1B HNF1 homeobox B involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4430439|PMID:20040500) Ensembl
MGI
PMID:20040500 GO_REF:0000107 MGI:4430439 NCBI chr 9:37,437,992...37,493,200
Ensembl chr 9:37,438,583...37,492,993
JBrowse link
negative regulation of mesenchymal cell apoptotic process involved in metanephric nephron morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PAX2 paired box 2 involved_in ISO (MGI:3704067|PMID:17314325) UniProt PMID:17314325 MGI:3704067 NCBI chr28:13,442,894...13,519,853
Ensembl chr28:13,442,893...13,532,094
JBrowse link
G PAX8 paired box 8 involved_in ISS UniProt GO_REF:0000024 NCBI chr17:37,307,130...37,331,729
Ensembl chr17:37,306,033...37,363,178
JBrowse link
negative regulation of mesenchymal cell apoptotic process involved in nephron morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMP7 bone morphogenetic protein 7 acts_upstream_of_or_within ISO (MGI:86404|PMID:9056639) MGI PMID:9056639 MGI:86404 NCBI chr24:42,203,183...42,294,105
Ensembl chr24:42,204,823...42,294,653
JBrowse link
negative regulation of stem cell population maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOXL2 lysyl oxidase like 2 involved_in ISO (MGI:6107312|PMID:25959397) UniProt PMID:25959397 MGI:6107312 NCBI chr25:34,095,858...34,186,775
Ensembl chr25:34,126,335...34,185,969
JBrowse link
G WNT9B Wnt family member 9B involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:10,157,607...10,172,664
Ensembl chr 9:10,149,842...10,172,654
JBrowse link
G ZNF706 zinc finger protein 706 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:2,967,884...2,978,040
Ensembl chr13:2,969,983...2,976,279
JBrowse link
neuronal stem cell population maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASPM assembly factor for spindle microtubules involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4367118|PMID:19896444) Ensembl
MGI
PMID:19896444 GO_REF:0000107 MGI:4367118 NCBI chr 7:5,591,530...5,663,673
Ensembl chr 7:5,590,957...5,660,919
JBrowse link
G CDH2 cadherin 2 involved_in ISO (MGI:5585327|PMID:24952463) UniProt PMID:24952463 MGI:5585327 NCBI chr 7:60,736,760...60,950,477
Ensembl chr 7:60,736,760...60,951,034
JBrowse link
G DLL1 delta like canonical Notch ligand 1 involved_in ISO (MGI:5688827|PMID:23695674)
(PMID:19682396)
UniProt PMID:19682396 PMID:23695674 MGI:5688827 NCBI chr12:72,265,078...72,272,347
Ensembl chr12:72,265,682...72,272,348
JBrowse link
G FANCC FA complementation group C acts_upstream_of_or_within ISO (MGI:5698336|PMID:24483844) MGI PMID:24483844 MGI:5698336 NCBI chr 1:71,388,931...71,678,019
Ensembl chr 1:71,487,601...71,678,506
JBrowse link
G FANCD2 FA complementation group D2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5698336|PMID:24483844) Ensembl
MGI
PMID:24483844 GO_REF:0000107 MGI:5698336 NCBI chr20:8,240,270...8,297,269
Ensembl chr20:8,240,311...8,297,568
JBrowse link
G FOXO1 forkhead box O1 acts_upstream_of_or_within ISO (MGI:4367118|PMID:19896444) MGI PMID:19896444 MGI:4367118 NCBI chr25:603,433...706,961
Ensembl chr25:603,543...702,825
JBrowse link
G FOXO3 forkhead box O3 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5698336|PMID:24483844)
(MGI:4367118|PMID:19896444)
Ensembl
MGI
PMID:19896444 PMID:24483844 GO_REF:0000107 MGI:4367118 MGI:5698336 NCBI chr12:65,552,455...65,673,467
Ensembl chr12:65,552,310...65,670,198
JBrowse link
G FUT10 fucosyltransferase 10 acts_upstream_of_or_within ISO (MGI:5532797|PMID:23986452) MGI PMID:23986452 MGI:5532797 NCBI chr16:31,186,333...31,265,463
Ensembl chr16:31,186,418...31,264,963
JBrowse link
G HES1 hes family bHLH transcription factor 1 involved_in ISO PMID:11399758
(MGI:5142379|PMID:11399758)
(PMID:19682396)
UniProt PMID:11399758 PMID:19682396 MGI:5142379 RGD:8554692
G HES5 hes family bHLH transcription factor 5 involved_in ISO PMID:11399758
(PMID:19682396)
(MGI:5142379|PMID:11399758)
UniProt PMID:11399758 PMID:19682396 MGI:5142379 RGD:8554692 NCBI chr 5:57,387,961...57,389,412
Ensembl chr 5:57,388,674...57,389,388
JBrowse link
G HOOK3 hook microtubule tethering protein 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4457463|PMID:20152126) Ensembl
MGI
PMID:20152126 GO_REF:0000107 MGI:4457463 NCBI chr16:22,791,198...22,940,168
Ensembl chr16:22,784,267...22,901,991
JBrowse link
G IGF2BP1 insulin like growth factor 2 mRNA binding protein 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5554963|PMID:24192035) Ensembl
MGI
PMID:24192035 GO_REF:0000107 MGI:5554963 NCBI chr 9:25,199,287...25,240,693
Ensembl chr 9:25,198,805...25,240,578
JBrowse link
G JAG1 jagged canonical Notch ligand 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr24:11,656,926...11,693,146
Ensembl chr24:11,657,416...11,692,199
JBrowse link
G MAPK8 mitogen-activated protein kinase 8 acts_upstream_of_or_within ISO PMID:24388750 MGI PMID:24388750 RGD:10047173 NCBI chr28:323,361...410,367
Ensembl chr28:368,513...406,401
JBrowse link
G MCPH1 microcephalin 1 acts_upstream_of_or_within ISO (MGI:5306866|PMID:21947081) MGI PMID:21947081 MGI:5306866 NCBI chr16:58,306,761...58,529,090
Ensembl chr16:58,295,280...58,529,433
JBrowse link
G MMP24 matrix metallopeptidase 24 involved_in ISO (MGI:5585327|PMID:24952463) UniProt PMID:24952463 MGI:5585327 NCBI chr24:24,223,049...24,258,082
Ensembl chr24:24,232,833...24,255,725
JBrowse link
G NOTCH1 notch receptor 1 involved_in ISO (PMID:19682396) UniProt PMID:19682396 NCBI chr 9:48,975,972...49,018,985
Ensembl chr 9:48,974,757...49,017,277
JBrowse link
G PCM1 pericentriolar material 1 acts_upstream_of_or_within ISO (MGI:4457463|PMID:20152126) MGI PMID:20152126 MGI:4457463 NCBI chr16:41,212,733...41,291,654
Ensembl chr16:41,214,417...41,291,376
JBrowse link
G PROX1 prospero homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:11,996,282...12,047,693
Ensembl chr 7:11,996,703...12,044,036
JBrowse link
G PRRX1 paired related homeobox 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5486509|PMID:23447615) Ensembl
MGI
PMID:23447615 GO_REF:0000107 MGI:5486509 NCBI chr 7:28,065,570...28,138,734
Ensembl chr 7:28,068,711...28,138,787
JBrowse link
G REST RE1 silencing transcription factor involved_in ISO (MGI:5906102|PMID:27819263) UniProt PMID:27819263 MGI:5906102 NCBI chr13:49,041,082...49,062,596
Ensembl chr13:49,041,047...49,059,388
JBrowse link
G SCT secretin acts_upstream_of_or_within ISO (MGI:4939559|PMID:21159798) MGI PMID:21159798 MGI:4939559
G SOX2 SRY-box transcription factor 2 involved_in ISO (MGI:5306514|PMID:22198669) UniProt PMID:22198669 MGI:5306514 NCBI chr34:14,853,000...14,855,153 JBrowse link
G SRRT serrate, RNA effector molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:8,881,171...8,893,504
Ensembl chr 6:8,881,176...8,892,963
JBrowse link
G SS18 SS18 subunit of BAF chromatin remodeling complex involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5504306|PMID:23785148) Ensembl
MGI
PMID:23785148 GO_REF:0000107 MGI:5504306 NCBI chr 7:62,490,901...62,571,607
Ensembl chr 7:62,475,290...62,570,234
JBrowse link
positive regulation of somatic stem cell population maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LBH LBH regulator of WNT signaling pathway involved_in ISO (MGI:5634223|PMID:25655704) CAFA PMID:25655704 MGI:5634223 NCBI chr17:23,939,135...23,969,611
Ensembl chr17:23,938,772...24,022,140
JBrowse link
G TP63 tumor protein p63 involved_in ISO (MGI:5634223|PMID:25655704) CAFA PMID:25655704 MGI:5634223 NCBI chr34:21,766,861...21,985,095
Ensembl chr34:21,766,496...21,983,046
JBrowse link
positive regulation of stem cell population maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ESRRB estrogen related receptor beta involved_in ISO (MGI:5468900|PMID:23040478), (MGI:5882870|PMID:23040477)
(MGI:5440110|PMID:23019124), (MGI:5887187|PMID:26206133)
UniProt PMID:23019124 PMID:23040477 PMID:23040478 PMID:26206133 MGI:5440110 MGI:5468900 MGI:5882870 MGI:5887187 NCBI chr 8:49,253,877...49,424,148
Ensembl chr 8:49,253,332...49,421,332
JBrowse link
G KDM2B lysine demethylase 2B acts_upstream_of_or_within ISO (MGI:5433809|PMID:21540074) MGI PMID:21540074 MGI:5433809 NCBI chr26:7,625,857...7,746,049
Ensembl chr26:7,598,931...7,745,113
JBrowse link
G NCOA3 nuclear receptor coactivator 3 involved_in ISO (MGI:5440110|PMID:23019124) UniProt PMID:23019124 MGI:5440110 Ensembl chr24:34,585,305...34,728,674
Ensembl chr24:34,585,305...34,728,674
JBrowse link
G PRDM14 PR/SET domain 14 involved_in ISO (MGI:5787734|PMID:26523391), (MGI:5788595|PMID:27281218) UniProt PMID:26523391 PMID:27281218 MGI:5787734 MGI:5788595 NCBI chr29:19,203,798...19,220,149
Ensembl chr29:19,203,807...19,220,518
JBrowse link
G REST RE1 silencing transcription factor involved_in ISO (PMID:21258371) UniProt PMID:21258371 NCBI chr13:49,041,082...49,062,596
Ensembl chr13:49,041,047...49,059,388
JBrowse link
G TEAD1 TEA domain transcription factor 1 acts_upstream_of_or_within ISO (MGI:4455217|PMID:20516196) MGI PMID:20516196 MGI:4455217 NCBI chr21:35,667,862...35,935,180
Ensembl chr21:35,566,865...35,934,438
JBrowse link
G TEAD3 TEA domain transcription factor 3 acts_upstream_of_or_within ISO (MGI:4455217|PMID:20516196) MGI PMID:20516196 MGI:4455217 NCBI chr12:4,610,663...4,627,817
Ensembl chr12:4,611,144...4,632,888
JBrowse link
G TEAD4 TEA domain transcription factor 4 acts_upstream_of_or_within ISO (MGI:4455217|PMID:20516196) MGI PMID:20516196 MGI:4455217 NCBI chr27:41,744,100...41,783,223
Ensembl chr27:41,748,871...41,803,556
JBrowse link
G YAP1 Yes1 associated transcriptional regulator acts_upstream_of_or_within ISO (MGI:4455217|PMID:20516196) MGI PMID:20516196 MGI:4455217 NCBI chr 5:29,394,760...29,495,977
Ensembl chr 5:29,394,541...29,496,251
JBrowse link
G ZNF322 zinc finger protein 322 involved_in ISO (MGI:6114965|PMID:24550733) UniProt PMID:24550733 MGI:6114965 NCBI chr35:24,374,689...24,397,793
Ensembl chr35:24,377,632...24,378,840
JBrowse link
regulation of somatic stem cell population maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MYC MYC proto-oncogene, bHLH transcription factor involved_in ISS UniProt GO_REF:0000024 NCBI chr13:25,200,772...25,205,309
Ensembl chr13:25,200,577...25,205,309
JBrowse link
G TAF5L TATA-box binding protein associated factor 5 like involved_in ISO (MGI:6323493|PMID:31005419) UniProt PMID:31005419 MGI:6323493 NCBI chr 4:9,646,516...9,674,318
Ensembl chr 4:9,646,510...9,673,148
JBrowse link
G TAF6L TATA-box binding protein associated factor 6 like involved_in ISO (MGI:6323493|PMID:31005419) UniProt PMID:31005419 MGI:6323493 NCBI chr18:53,898,748...53,910,836
Ensembl chr18:53,898,732...53,910,454
JBrowse link
regulation of stem cell population maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CNOT1 CCR4-NOT transcription complex subunit 1 involved_in ISO (MGI:5487505|PMID:22367759)
(PMID:22367759)
UniProt PMID:22367759 MGI:5487505 NCBI chr 2:58,038,456...58,138,364
Ensembl chr 2:58,038,483...58,137,622
JBrowse link
G CNOT2 CCR4-NOT transcription complex subunit 2 involved_in ISO (PMID:22367759)
(MGI:5487505|PMID:22367759)
UniProt PMID:22367759 MGI:5487505 NCBI chr10:12,057,269...12,174,405
Ensembl chr10:12,009,762...12,172,427
JBrowse link
G CNOT3 CCR4-NOT transcription complex subunit 3 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:103,057,392...103,070,612
Ensembl chr 1:103,057,542...103,066,887
JBrowse link
G ELAVL1 ELAV like RNA binding protein 1 involved_in ISO (MGI:5559905|PMID:24394384) UniProt PMID:24394384 MGI:5559905 NCBI chr20:52,648,878...52,677,578 JBrowse link
G HMGA2 high mobility group AT-hook 2 involved_in ISO (PMID:17624332) UniProt PMID:17624332 NCBI chr10:8,348,101...8,491,435 JBrowse link
G KAT2A lysine acetyltransferase 2A involved_in ISO (MGI:6377803|PMID:30270482) UniProt PMID:30270482 MGI:6377803 NCBI chr 9:20,778,434...20,787,057
Ensembl chr 9:20,779,042...20,787,067
JBrowse link
G KDM3A lysine demethylase 3A involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3759699|PMID:17938240) Ensembl
MGI
PMID:17938240 GO_REF:0000107 MGI:3759699 NCBI chr17:38,690,962...38,744,507
Ensembl chr17:38,690,979...38,743,739
JBrowse link
G NCOA3 nuclear receptor coactivator 3 acts_upstream_of_or_within ISO (MGI:5467164|PMID:22977234) MGI PMID:22977234 MGI:5467164 Ensembl chr24:34,585,305...34,728,674
Ensembl chr24:34,585,305...34,728,674
JBrowse link
G NFYA nuclear transcription factor Y subunit alpha acts_upstream_of_or_within ISO (MGI:5474438|PMID:22969033) MGI PMID:22969033 MGI:5474438 NCBI chr12:9,827,254...9,854,693
Ensembl chr12:9,835,285...9,854,543
JBrowse link
G PTN pleiotrophin involved_in ISO (MGI:5293574|PMID:21791434) UniProt PMID:21791434 MGI:5293574 NCBI chr16:11,283,078...11,382,820
Ensembl chr16:11,283,077...11,382,814
JBrowse link
G SAV1 salvador family WW domain containing protein 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3785211|PMID:18369314) Ensembl
MGI
PMID:18369314 GO_REF:0000107 MGI:3785211 NCBI chr 8:27,034,606...27,061,926
Ensembl chr 8:27,022,628...27,062,611
JBrowse link
G SMO smoothened, frizzled class receptor acts_upstream_of_or_within ISO (MGI:3696007|PMID:17199044) MGI PMID:17199044 MGI:3696007 NCBI chr14:7,518,871...7,527,703
Ensembl chr14:7,518,856...7,528,033
JBrowse link
G TAL1 TAL bHLH transcription factor 1, erythroid differentiation factor acts_upstream_of_or_within ISO (MGI:4421485|PMID:19850742) MGI PMID:19850742 MGI:4421485 NCBI chr15:13,446,752...13,462,038
Ensembl chr15:13,449,481...13,462,047
JBrowse link
G TCF7L1 transcription factor 7 like 1 acts_upstream_of_or_within ISO (MGI:3777490|PMID:18347094), (MGI:3804326|PMID:18467660) MGI PMID:18347094 PMID:18467660 MGI:3777490 MGI:3804326 NCBI chr17:39,699,958...39,859,167
Ensembl chr17:39,699,958...39,858,182
JBrowse link
G TCL1A TCL1 family AKT coactivator A acts_upstream_of_or_within ISO (MGI:3759699|PMID:17938240) MGI PMID:17938240 MGI:3759699
G WDR43 WD repeat domain 43 involved_in ISO (MGI:6323527|PMID:31128943) UniProt PMID:31128943 MGI:6323527 NCBI chr17:22,769,281...22,813,559
Ensembl chr17:22,769,318...22,812,199
JBrowse link
G ZC3H13 zinc finger CCCH-type containing 13 involved_in ISO (MGI:6158697|PMID:29547716) UniProt PMID:29547716 MGI:6158697 NCBI chr22:5,127,094...5,219,456
Ensembl chr22:5,133,249...5,217,908
JBrowse link
somatic stem cell population maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APC APC regulator of WNT signaling pathway acts_upstream_of_or_within ISO (MGI:50403|PMID:1541640) MGI PMID:1541640 MGI:50403 NCBI chr 3:252,052...380,506
Ensembl chr 3:253,081...322,993
JBrowse link
G ASCL2 achaete-scute family bHLH transcription factor 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3846269|PMID:19269367) Ensembl
MGI
PMID:19269367 GO_REF:0000107 MGI:3846269 NCBI chr18:46,394,034...46,396,723
Ensembl chr18:46,395,391...46,395,975
JBrowse link
G BCL9 BCL9 transcription coactivator involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4819869|PMID:20682801) Ensembl
MGI
PMID:20682801 GO_REF:0000107 MGI:4819869 NCBI chr17:58,105,914...58,189,065
Ensembl chr17:58,168,375...58,189,062
JBrowse link
G BCL9L BCL9 like acts_upstream_of_or_within ISO (MGI:4819869|PMID:20682801) MGI PMID:20682801 MGI:4819869 NCBI chr 5:14,893,548...14,919,121
Ensembl chr 5:14,900,208...14,919,193
JBrowse link
G BRAF B-Raf proto-oncogene, serine/threonine kinase acts_upstream_of_or_within ISO (MGI:5487489|PMID:23022482) MGI PMID:23022482 MGI:5487489 NCBI chr16:8,222,909...8,318,179
Ensembl chr16:8,222,907...8,317,906
JBrowse link
G CDX2 caudal type homeobox 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4819480|PMID:20404091)
(MGI:3612803|PMID:16325584)
Ensembl
MGI
PMID:16325584 PMID:20404091 GO_REF:0000107 MGI:3612803 MGI:4819480 NCBI chr25:11,701,134...11,707,883
Ensembl chr25:11,700,779...11,707,127
JBrowse link
G CUL4A cullin 4A involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3839083|PMID:17616641) Ensembl
MGI
PMID:17616641 GO_REF:0000107 MGI:3839083 NCBI chr22:60,624,215...60,667,844
Ensembl chr22:60,624,241...60,666,616
JBrowse link
G ELF5 E74 like ETS transcription factor 5 acts_upstream_of_or_within ISO (MGI:5604337|PMID:24859262) MGI PMID:24859262 MGI:5604337 NCBI chr18:33,342,962...33,376,012
Ensembl chr18:33,332,324...33,374,828
JBrowse link
G FGF10 fibroblast growth factor 10 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2159281|PMID:11880361) Ensembl
MGI
PMID:11880361 GO_REF:0000107 MGI:2159281 NCBI chr 4:65,851,130...65,930,944
Ensembl chr 4:65,851,069...65,928,192
JBrowse link
G FGFR3 fibroblast growth factor receptor 3 acts_upstream_of_or_within ISO (MGI:4352984|PMID:19407216) MGI PMID:19407216 MGI:4352984 NCBI chr 3:62,309,128...62,318,932
Ensembl chr 3:62,303,756...62,323,896
JBrowse link
G GATA2 GATA binding protein 2 acts_upstream_of_or_within ISO (MGI:3589329|PMID:16082385) MGI PMID:16082385 MGI:3589329 NCBI chr20:2,472,251...2,488,380
Ensembl chr20:2,473,912...2,480,991
JBrowse link
G HES1 hes family bHLH transcription factor 1 acts_upstream_of_or_within ISO (MGI:1351379|PMID:10615124) MGI PMID:10615124 MGI:1351379
G HMGA2 high mobility group AT-hook 2 acts_upstream_of_or_within ISO (MGI:3829847|PMID:18957199) MGI PMID:18957199 MGI:3829847 NCBI chr10:8,348,101...8,491,435 JBrowse link
G KAT6A lysine acetyltransferase 6A acts_upstream_of_or_within ISO (MGI:3624570|PMID:16702405)
(MGI:3624066|PMID:16651658)
MGI PMID:16651658 PMID:16702405 MGI:3624066 MGI:3624570 NCBI chr16:23,604,629...23,717,047
Ensembl chr16:23,604,200...23,724,252
JBrowse link
G KIT KIT proto-oncogene, receptor tyrosine kinase ISO neural stem cells from the ciliary epithelium of the eye RGD PMID:15302600 RGD:2292509 NCBI chr13:47,108,442...47,190,935
Ensembl chr13:47,108,504...47,190,029
JBrowse link
G KLF10 Kruppel like factor 10 acts_upstream_of_or_within ISO (MGI:3850801|PMID:19379700) MGI PMID:19379700 MGI:3850801 NCBI chr13:4,216,745...4,223,708
Ensembl chr13:4,218,084...4,223,691
JBrowse link
G LDB1 LIM domain binding 1 acts_upstream_of_or_within ISO (MGI:3768693|PMID:17991461) MGI PMID:17991461 MGI:3768693 NCBI chr28:14,646,409...14,658,324
Ensembl chr28:14,646,056...14,658,548
JBrowse link
G LDB2 LIM domain binding 2 acts_upstream_of_or_within ISO (MGI:3768693|PMID:17991461) MGI PMID:17991461 MGI:3768693 NCBI chr 3:63,508,721...63,883,842
Ensembl chr 3:63,508,247...63,883,717
JBrowse link
G LIG4 DNA ligase 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3715270|PMID:17554302) Ensembl
MGI
PMID:17554302 GO_REF:0000107 MGI:3715270 NCBI chr22:56,980,333...56,987,636
Ensembl chr22:56,980,622...56,983,357
JBrowse link
G LRP5 LDL receptor related protein 5 acts_upstream_of_or_within ISO (MGI:4358817|PMID:19672307) MGI PMID:19672307 MGI:4358817 NCBI chr18:49,439,494...49,555,375
Ensembl chr18:49,439,483...49,516,396
JBrowse link
G NANOG Nanog homeobox involved_in ISO (PMID:18388306) UniProt PMID:18388306 NCBI chr27:37,262,558...37,266,449 JBrowse link
G NOG noggin involved_in ISO (PMID:17889703) BHF-UCL PMID:17889703 NCBI chr 9:31,453,604...31,456,060 JBrowse link
G NR2E1 nuclear receptor subfamily 2 group E member 1 acts_upstream_of_or_within ISO (MGI:3806374|PMID:18794344)
(MGI:3527227|PMID:12527005)
(MGI:2686847|PMID:14702088)
MGI PMID:12527005 PMID:14702088 PMID:18794344 MGI:2686847 MGI:3527227 MGI:3806374 NCBI chr12:65,209,177...65,230,274
Ensembl chr12:65,209,542...65,228,998
JBrowse link
G PRDM16 PR/SET domain 16 acts_upstream_of_or_within ISO (MGI:3850801|PMID:19379700) MGI PMID:19379700 MGI:3850801 NCBI chr 5:57,805,951...58,018,817
Ensembl chr 5:57,730,370...58,017,976
JBrowse link
G RAF1 Raf-1 proto-oncogene, serine/threonine kinase involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5487489|PMID:23022482) Ensembl
MGI
PMID:23022482 GO_REF:0000107 MGI:5487489 NCBI chr20:5,892,839...5,972,672
Ensembl chr20:5,892,834...5,972,090
JBrowse link
G RBPJ recombination signal binding protein for immunoglobulin kappa J region acts_upstream_of_or_within ISO (MGI:5292802|PMID:21402740) MGI PMID:21402740 MGI:5292802 NCBI chr 3:84,060,417...84,286,008
Ensembl chr 3:84,064,440...84,286,360
JBrowse link
G REST RE1 silencing transcription factor involved_in ISO (MGI:5906102|PMID:27819263) UniProt PMID:27819263 MGI:5906102 NCBI chr13:49,041,082...49,062,596
Ensembl chr13:49,041,047...49,059,388
JBrowse link
G SFRP1 secreted frizzled related protein 1 acts_upstream_of_or_within ISO (MGI:4356203|PMID:19664990) MGI PMID:19664990 MGI:4356203 NCBI chr16:24,262,451...24,306,162
Ensembl chr16:24,261,946...24,302,964
JBrowse link
G SKI SKI proto-oncogene acts_upstream_of_or_within ISO (MGI:3850801|PMID:19379700) MGI PMID:19379700 MGI:3850801 NCBI chr 5:57,144,178...57,216,385
Ensembl chr 5:57,145,825...57,214,403
JBrowse link
G SOX2 SRY-box transcription factor 2 involved_in ISO (PMID:19409607)
(PMID:18388306), (PMID:19736317)
UniProt
BHF-UCL
PMID:18388306 PMID:19409607 PMID:19736317 NCBI chr34:14,853,000...14,855,153 JBrowse link
G SOX4 SRY-box transcription factor 4 acts_upstream_of_or_within ISO (MGI:3850801|PMID:19379700) MGI PMID:19379700 MGI:3850801 NCBI chr35:20,098,783...20,101,357
Ensembl chr35:20,099,773...20,101,154
JBrowse link
G SOX9 SRY-box transcription factor 9 involved_in
acts_upstream_of_or_within
ISS
ISO
(MGI:4836759|PMID:20871603) UniProt
MGI
PMID:20871603 GO_REF:0000024 MGI:4836759 NCBI chr 9:8,275,049...8,278,172
Ensembl chr 9:8,275,049...8,278,172
JBrowse link
G SPI1 Spi-1 proto-oncogene acts_upstream_of_or_within ISO (MGI:3850801|PMID:19379700) MGI PMID:19379700 MGI:3850801 NCBI chr18:42,253,849...42,269,497
Ensembl chr18:42,253,811...42,269,727
JBrowse link
G TCF7L1 transcription factor 7 like 1 acts_upstream_of_or_within ISO (MGI:4412144|PMID:19718027) MGI PMID:19718027 MGI:4412144 NCBI chr17:39,699,958...39,859,167
Ensembl chr17:39,699,958...39,858,182
JBrowse link
G TCF7L2 transcription factor 7 like 2 acts_upstream_of_or_within ISO (MGI:4412144|PMID:19718027)
(MGI:1276271|PMID:9697701), (MGI:1330442|PMID:10027409), (MGI:3841508|PMID:19251639)
MGI PMID:9697701 PMID:10027409 PMID:19251639 PMID:19718027 MGI:1276271 MGI:1330442 MGI:3841508 MGI:4412144 NCBI chr28:23,966,079...24,162,775
Ensembl chr28:23,966,073...24,163,737
JBrowse link
G TFAP2C transcription factor AP-2 gamma acts_upstream_of_or_within ISO (MGI:4819480|PMID:20404091) MGI PMID:20404091 MGI:4819480 NCBI chr24:41,787,477...41,797,446
Ensembl chr24:41,783,490...41,796,509
JBrowse link
G VANGL2 VANGL planar cell polarity protein 2 acts_upstream_of_or_within ISO (MGI:3849215|PMID:19497282) MGI PMID:19497282 MGI:3849215 NCBI chr38:21,822,873...21,824,537 JBrowse link
G VPS72 vacuolar protein sorting 72 homolog acts_upstream_of_or_within ISO (MGI:3850801|PMID:19379700) MGI PMID:19379700 MGI:3850801 NCBI chr17:60,239,299...60,252,323
Ensembl chr17:60,239,395...60,252,280
JBrowse link
G WNT7A Wnt family member 7A involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3849215|PMID:19497282) Ensembl
MGI
PMID:19497282 GO_REF:0000107 MGI:3849215 NCBI chr20:4,072,010...4,139,521
Ensembl chr20:4,073,929...4,139,436
JBrowse link
G YAP1 Yes1 associated transcriptional regulator acts_upstream_of_or_within ISO (MGI:3818355|PMID:17980593) MGI PMID:17980593 MGI:3818355 NCBI chr 5:29,394,760...29,495,977
Ensembl chr 5:29,394,541...29,496,251
JBrowse link
G ZFP36L2 ZFP36 ring finger protein like 2 involved_in ISO (MGI:5500826|PMID:23748442) UniProt PMID:23748442 MGI:5500826 NCBI chr10:45,746,952...45,751,268
Ensembl chr10:45,748,936...45,751,250
JBrowse link
G ZHX2 zinc fingers and homeoboxes 2 acts_upstream_of_or_within ISO (MGI:3849211|PMID:19515908) MGI PMID:19515908 MGI:3849211 NCBI chr13:21,231,985...21,393,756
Ensembl chr13:21,377,316...21,379,832
JBrowse link

Term paths to the root