Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   

ONTOLOGY REPORT - ANNOTATIONS


Term:polyol metabolic process
go back to main search page
Accession:GO:0019751 term browser browse the term
Definition:The chemical reactions and pathways involving a polyol, any alcohol containing three or more hydroxyl groups attached to saturated carbon atoms.
Synonyms:exact_synonym: polyhydric alcohol metabolic process;   polyol metabolism


GViewer not supported for the selected species.

show annotations for term's descendants           Sort by:
 
calcitriol biosynthetic process from calciol term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC101963150 sterol 26-hydroxylase, mitochondrial involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936569:1,213,700...1,250,181
Ensembl chrNW_004936569:1,213,573...1,250,589
JBrowse link
G LOC101972957 vitamin D 25-hydroxylase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936528:3,881,630...3,897,613
Ensembl chrNW_004936528:3,881,087...3,900,302
JBrowse link
G LOC101978323 25-hydroxyvitamin D-1 alpha hydroxylase, mitochondrial involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936646:1,899,686...1,904,104
Ensembl chrNW_004936646:1,900,259...1,904,104
JBrowse link
diol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ephx1 epoxide hydrolase 1 ISO RGD PMID:2507189 RGD:11252156 NCBI chrNW_004936526:2,589,254...2,652,831
Ensembl chrNW_004936526:2,614,059...2,653,286
JBrowse link
diol metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lrp2 LDL receptor related protein 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1331347|PMID:10052453) MGI
Ensembl
PMID:10052453 GO_REF:0000107 MGI:1331347 NCBI chrNW_004936469:10,245,001...10,438,933
Ensembl chrNW_004936469:10,244,881...10,438,935
JBrowse link
diphosphoinositol polyphosphate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC106145632 diphosphoinositol polyphosphate phosphohydrolase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936476:24,722,448...24,772,183
Ensembl chrNW_004936476:24,668,660...24,769,766
JBrowse link
galactitol metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Galk1 galactokinase 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1861531|PMID:10915771) MGI
Ensembl
PMID:10915771 GO_REF:0000107 MGI:1861531 NCBI chrNW_004936594:944,936...950,537
Ensembl chrNW_004936594:944,944...949,838
JBrowse link
gentamycin metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc34a1 solute carrier family 34 member 1 ISO RGD PMID:11231357 RGD:7243145 NCBI chrNW_004936597:1,667,700...1,684,533
Ensembl chrNW_004936597:1,667,569...1,684,539
JBrowse link
glycerol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Got1 glutamic-oxaloacetic transaminase 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3722000|PMID:17545671) MGI
Ensembl
PMID:17545671 GO_REF:0000107 MGI:3722000 NCBI chrNW_004936636:617,376...640,424
Ensembl chrNW_004936636:617,356...640,932
JBrowse link
G Lep leptin ISO RGD PMID:21068181 RGD:5128556 NCBI chrNW_004936479:15,394,966...15,411,334
Ensembl chrNW_004936479:15,394,966...15,411,334
JBrowse link
G Pgp phosphoglycolate phosphatase involved_in ISO (PMID:26755581)
(MGI:5707518|PMID:26755581)
UniProt PMID:26755581 MGI:5707518 RGD:10679995 NCBI chrNW_004936694:1,834,016...1,836,359 JBrowse link
glycerol biosynthetic process from pyruvate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pck1 phosphoenolpyruvate carboxykinase 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2157262|PMID:11792850) MGI
Ensembl
PMID:11792850 GO_REF:0000107 MGI:2157262 NCBI chrNW_004936530:361,872...367,005
Ensembl chrNW_004936530:361,872...367,005
JBrowse link
glycerol catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gk glycerol kinase involved_in IEA UniProt GO_REF:0000041 NCBI chrNW_004936553:6,707,148...6,787,245 JBrowse link
G Gk5 glycerol kinase 5 involved_in IEA UniProt GO_REF:0000041 NCBI chrNW_004936540:3,835,859...3,908,948
Ensembl chrNW_004936540:3,835,635...3,908,954
JBrowse link
glycerol metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Angptl3 angiopoietin like 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936692:286,432...295,021
Ensembl chrNW_004936692:286,717...294,822
JBrowse link
G Coq2 coenzyme Q2, polyprenyltransferase involved_in ISO (PMID:15153069) UniProt PMID:15153069 NCBI chrNW_004936738:1,354,424...1,371,497 JBrowse link
G Coq3 coenzyme Q3, methyltransferase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936651:983,397...1,000,669
Ensembl chrNW_004936651:979,053...1,000,871
JBrowse link
G Dysf dysferlin acts_upstream_of_or_within ISO (MGI:5548046|PMID:24177035) MGI PMID:24177035 MGI:5548046 NCBI chrNW_004936491:15,412,606...15,618,519
Ensembl chrNW_004936491:15,413,206...15,618,519
JBrowse link
G Gk glycerol kinase acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1097749|PMID:9302256), (MGI:3587535|PMID:16105550), (MGI:5051890|PMID:21536471) MGI
UniProt
Ensembl
PMID:9302256 PMID:16105550 PMID:21536471 GO_REF:0000043 GO_REF:0000107 MGI:1097749 MGI:3587535 MGI:5051890 NCBI chrNW_004936553:6,707,148...6,787,245 JBrowse link
G Myof myoferlin acts_upstream_of_or_within ISO (MGI:5548046|PMID:24177035) MGI PMID:24177035 MGI:5548046 NCBI chrNW_004936601:1,489,252...1,640,536
Ensembl chrNW_004936601:1,489,327...1,640,026
JBrowse link
G Tkfc triokinase and FMN cyclase involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936581:1,697,965...1,710,363
Ensembl chrNW_004936581:1,697,947...1,710,738
JBrowse link
inositol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Impa1 inositol monophosphatase 1 involved_in IEA UniProt GO_REF:0000041 NCBI chrNW_004936656:2,598,454...2,616,643
Ensembl chrNW_004936656:2,598,413...2,618,396
JBrowse link
G Impa2 inositol monophosphatase 2 involved_in IEA UniProt GO_REF:0000041 NCBI chrNW_004936626:268,788...310,781
Ensembl chrNW_004936626:268,727...310,787
JBrowse link
G Isyna1 inositol-3-phosphate synthase 1 involved_in IEA UniProt
Ensembl
InterPro
GO_REF:0000002 GO_REF:0000041 GO_REF:0000043 GO_REF:0000107 NCBI chrNW_004936596:2,815,782...2,819,100
Ensembl chrNW_004936596:2,815,821...2,819,020
JBrowse link
inositol catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Miox myo-inositol oxygenase involved_in IEA UniProt
InterPro
Ensembl
GO_REF:0000002 GO_REF:0000104 GO_REF:0000107 NCBI chrNW_004936629:355,517...357,678
Ensembl chrNW_004936629:355,362...357,697
JBrowse link
inositol metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Itpka inositol-trisphosphate 3-kinase A acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1314771|PMID:10454357) MGI
Ensembl
PMID:10454357 GO_REF:0000107 MGI:1314771 NCBI chrNW_004936471:4,840,113...4,848,881
Ensembl chrNW_004936471:4,840,152...4,848,881
JBrowse link
G Mecp2 methyl-CpG binding protein 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3769075|PMID:17237885) MGI
Ensembl
PMID:17237885 GO_REF:0000107 MGI:3769075 NCBI chrNW_004936809:902,938...967,771
Ensembl chrNW_004936809:911,764...966,839
JBrowse link
G Ppip5k1 diphosphoinositol pentakisphosphate kinase 1 involved_in ISO (PMID:17412958) UniProt PMID:17412958 NCBI chrNW_004936471:6,707,865...6,751,064
Ensembl chrNW_004936471:6,707,893...6,751,045
JBrowse link
G Slc5a3 solute carrier family 5 member 3 acts_upstream_of_or_within ISO (MGI:3654617|PMID:16644257), (MGI:3812279|PMID:18675571) MGI PMID:16644257 PMID:18675571 MGI:3654617 MGI:3812279 NCBI chrNW_004936500:8,284,631...8,296,387 JBrowse link
inositol phosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ip6k1 inositol hexakisphosphate kinase 1 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936529:1,338,812...1,396,981
Ensembl chrNW_004936529:1,338,812...1,396,965
JBrowse link
G Ip6k2 inositol hexakisphosphate kinase 2 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936529:487,277...515,614
Ensembl chrNW_004936529:486,879...515,674
JBrowse link
G Ip6k3 inositol hexakisphosphate kinase 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:11502751) MGI
InterPro
Ensembl
PMID:11502751 GO_REF:0000002 GO_REF:0000107 NCBI chrNW_004936476:25,208,332...25,231,236
Ensembl chrNW_004936476:25,208,284...25,231,281
JBrowse link
G Ipmk inositol polyphosphate multikinase acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3583505|PMID:15939867) MGI
InterPro
PMID:15939867 GO_REF:0000002 MGI:3583505 NCBI chrNW_004936614:4,724,935...4,772,373
Ensembl chrNW_004936614:4,725,250...4,772,153
JBrowse link
G Itpka inositol-trisphosphate 3-kinase A involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936471:4,840,113...4,848,881
Ensembl chrNW_004936471:4,840,152...4,848,881
JBrowse link
G Itpkb inositol-trisphosphate 3-kinase B involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936526:3,378,046...3,477,177
Ensembl chrNW_004936526:3,376,786...3,477,554
JBrowse link
G Itpkc inositol-trisphosphate 3-kinase C involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936661:3,006,506...3,023,355
Ensembl chrNW_004936661:3,006,505...3,022,823
JBrowse link
G Spata5 spermatogenesis associated 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936662:1,957,364...2,207,410
Ensembl chrNW_004936662:1,886,176...1,929,097
Ensembl chrNW_004936662:1,886,176...1,929,097
JBrowse link
inositol phosphate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ntsr1 neurotensin receptor 1 ISO RGD PMID:15707678 RGD:9743914 NCBI chrNW_004936514:10,240,990...10,272,859
Ensembl chrNW_004936514:10,241,020...10,272,816
JBrowse link
inositol phosphate dephosphorylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bpnt1 3'(2'), 5'-bisphosphate nucleotidase 1 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936650:2,113,933...2,138,487
Ensembl chrNW_004936650:2,113,649...2,138,934
JBrowse link
G Bpnt2 3'(2'), 5'-bisphosphate nucleotidase 2 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936496:3,498,534...3,521,939
Ensembl chrNW_004936496:3,500,303...3,521,673
JBrowse link
G Impa1 inositol monophosphatase 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:17068342) MGI
Ensembl
InterPro
PMID:17068342 GO_REF:0000002 GO_REF:0000107 NCBI chrNW_004936656:2,598,454...2,616,643
Ensembl chrNW_004936656:2,598,413...2,618,396
JBrowse link
G Impa2 inositol monophosphatase 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:17068342) MGI
InterPro
Ensembl
PMID:17068342 GO_REF:0000002 GO_REF:0000107 NCBI chrNW_004936626:268,788...310,781
Ensembl chrNW_004936626:268,727...310,787
JBrowse link
G Inpp1 inositol polyphosphate-1-phosphatase involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936506:7,767,126...7,793,111
Ensembl chrNW_004936506:7,766,068...7,793,210
JBrowse link
G Inpp4b inositol polyphosphate-4-phosphatase type II B acts_upstream_of_or_within ISO PMID:9295334 MGI PMID:9295334 RGD:633135 NCBI chrNW_004936535:5,427,131...6,168,622
Ensembl chrNW_004936535:5,794,135...6,171,072
JBrowse link
G Inpp5a inositol polyphosphate-5-phosphatase A acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:8006039) MGI
Ensembl
PMID:8006039 GO_REF:0000107 NCBI chrNW_004936486:18,893,958...19,022,450
Ensembl chrNW_004936486:18,893,909...19,022,477
JBrowse link
G Inpp5b inositol polyphosphate-5-phosphatase B involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936474:20,028,575...20,083,931
Ensembl chrNW_004936474:20,028,585...20,083,906
JBrowse link
G Inpp5e inositol polyphosphate-5-phosphatase E acts_upstream_of_or_within ISO (MGI:1861829|PMID:10806194) MGI PMID:10806194 MGI:1861829 NCBI chrNW_004936669:1,377,005...1,385,287 JBrowse link
G Inpp5j inositol polyphosphate-5-phosphatase J involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936755:297,016...307,103
Ensembl chrNW_004936755:297,091...306,809
JBrowse link
G Inpp5k inositol polyphosphate-5-phosphatase K acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:12536145) MGI
InterPro
Ensembl
PMID:12536145 GO_REF:0000002 GO_REF:0000107 NCBI chrNW_004936538:7,641,485...7,662,033
Ensembl chrNW_004936538:7,641,127...7,661,787
JBrowse link
G Mtmr2 myotubularin related protein 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3619505|PMID:16399794) MGI
Ensembl
PMID:16399794 GO_REF:0000107 MGI:3619505 NCBI chrNW_004936700:1,790,592...1,873,019
Ensembl chrNW_004936700:1,790,064...1,873,034
JBrowse link
G Mtmr7 myotubularin related protein 7 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2673068|PMID:12890864) MGI
Ensembl
PMID:12890864 GO_REF:0000107 MGI:2673068 NCBI chrNW_004936573:6,346,106...6,434,697
Ensembl chrNW_004936573:6,346,792...6,434,472
JBrowse link
G Ocrl OCRL inositol polyphosphate-5-phosphatase involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936479:1,955,362...2,011,608
Ensembl chrNW_004936479:1,953,488...2,012,018
JBrowse link
G Pten phosphatase and tensin homolog involved_in ISO
IEA
RGD
Ensembl
InterPro
UniProt
PMID:18056380 GO_REF:0000002 GO_REF:0000104 GO_REF:0000107 RGD:2292524 NCBI chrNW_004936735:1,252,414...1,338,318
Ensembl chrNW_004936735:1,252,414...1,338,323
JBrowse link
G Synj1 synaptojanin 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1346710|PMID:10535736) MGI
InterPro
PMID:10535736 GO_REF:0000002 MGI:1346710 NCBI chrNW_004936500:9,484,571...9,565,980
Ensembl chrNW_004936500:9,484,586...9,566,100
JBrowse link
G Synj2 synaptojanin 2 involved_in ISO
IEA
RGD
InterPro
PMID:9388224 GO_REF:0000002 RGD:69390 NCBI chrNW_004936489:9,848,070...9,911,952
Ensembl chrNW_004936489:9,848,062...9,908,760
JBrowse link
inositol phosphate metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Galr2 galanin receptor 2 ISO RGD PMID:9427506 RGD:69840 NCBI chrNW_004936594:1,236,281...1,239,213
Ensembl chrNW_004936594:1,236,061...1,239,113
JBrowse link
G Grk3 G protein-coupled receptor kinase 3 ISO RGD PMID:17573483 RGD:5685371 NCBI chrNW_004936657:425,902...522,331
Ensembl chrNW_004936657:426,787...521,198
JBrowse link
G Htr2b 5-hydroxytryptamine receptor 2B ISO RGD PMID:1331748 RGD:9727450 NCBI chrNW_004936525:5,711,894...5,729,074
Ensembl chrNW_004936525:5,712,329...5,729,831
JBrowse link
G Ip6k2 inositol hexakisphosphate kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936529:487,277...515,614
Ensembl chrNW_004936529:486,879...515,674
JBrowse link
inositol phosphorylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ippk inositol-pentakisphosphate 2-kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936487:2,200,588...2,254,130
Ensembl chrNW_004936487:2,198,973...2,254,151
JBrowse link
inositol trisphosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Plcg1 phospholipase C gamma 1 ISO RGD PMID:16973916 RGD:2299886 NCBI chrNW_004936561:598,372...631,575
Ensembl chrNW_004936561:598,382...631,581
JBrowse link
G Plcg2 phospholipase C gamma 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:85738|PMID:9013981) MGI
Ensembl
PMID:9013981 GO_REF:0000107 MGI:85738 NCBI chrNW_004936475:29,248,533...29,377,335
Ensembl chrNW_004936475:29,248,516...29,377,206
JBrowse link
G Pou1f1 POU class 1 homeobox 1 acts_upstream_of ISO (MGI:2135699|PMID:11371619) MGI PMID:11371619 MGI:2135699 NCBI chrNW_004936610:2,262,715...2,279,098
Ensembl chrNW_004936610:2,262,715...2,279,098
JBrowse link
G Ptafr platelet activating factor receptor acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:85738|PMID:9013981) MGI
Ensembl
PMID:9013981 GO_REF:0000107 MGI:85738 NCBI chrNW_004936474:12,333,905...12,337,140
Ensembl chrNW_004936474:12,336,071...12,337,099
JBrowse link
G Scp2 sterol carrier protein 2 involved_in ISO (PMID:12641450) UniProt PMID:12641450 NCBI chrNW_004936522:8,004,503...8,110,995
Ensembl chrNW_004936522:8,005,442...8,110,889
JBrowse link
inositol trisphosphate metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Inppl1 inositol polyphosphate phosphatase like 1 ISO RGD PMID:12933696 RGD:1626126 NCBI chrNW_004936498:1,524,128...1,539,680
Ensembl chrNW_004936498:1,524,128...1,540,578
JBrowse link
G Ipmk inositol polyphosphate multikinase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936614:4,724,935...4,772,373
Ensembl chrNW_004936614:4,725,250...4,772,153
JBrowse link
G Itpk1 inositol-tetrakisphosphate 1-kinase involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936733:930,986...1,064,223
Ensembl chrNW_004936733:930,972...1,064,229
JBrowse link
G Itpkb inositol-trisphosphate 3-kinase B involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936526:3,378,046...3,477,177
Ensembl chrNW_004936526:3,376,786...3,477,554
JBrowse link
G Plcb1 phospholipase C beta 1 ISO RGD PMID:8387502 RGD:11535163 NCBI chrNW_004936485:10,548,966...11,254,139
Ensembl chrNW_004936485:10,548,966...11,253,761
JBrowse link
G Plcb3 phospholipase C beta 3 ISO RGD PMID:8387502 RGD:11535163 NCBI chrNW_004936599:4,934,123...4,950,564
Ensembl chrNW_004936599:4,934,060...4,950,570
JBrowse link
G Plcg1 phospholipase C gamma 1 ISO RGD PMID:7812955 RGD:151356942 NCBI chrNW_004936561:598,372...631,575
Ensembl chrNW_004936561:598,382...631,581
JBrowse link
L-xylitol catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sord sorbitol dehydrogenase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:7,760,097...7,805,475
Ensembl chrNW_004936471:7,760,052...7,795,671
JBrowse link
L-xylitol metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sord sorbitol dehydrogenase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:7,760,097...7,805,475
Ensembl chrNW_004936471:7,760,052...7,795,671
JBrowse link
negative regulation of inositol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Isyna1 inositol-3-phosphate synthase 1 involved_in ISO PMID:19188364 UniProt PMID:19188364 RGD:153298950 NCBI chrNW_004936596:2,815,782...2,819,100
Ensembl chrNW_004936596:2,815,821...2,819,020
JBrowse link
negative regulation of inositol phosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Plek pleckstrin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936491:12,762,421...12,818,249
Ensembl chrNW_004936491:12,762,328...12,818,306
JBrowse link
G Prkg1 protein kinase cGMP-dependent 1 ISO RGD PMID:7535379 RGD:7777104 NCBI chrNW_004936787:330,390...1,491,994
Ensembl chrNW_004936787:332,342...1,491,285
JBrowse link
phytosphingosine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acer3 alkaline ceramidase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936498:5,496,991...5,653,206
Ensembl chrNW_004936498:5,496,991...5,653,206
JBrowse link
positive regulation of inositol phosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adcyap1r1 ADCYAP receptor type I ISO RGD PMID:8943280 RGD:2315982 NCBI chrNW_004936478:7,278,081...7,322,970
Ensembl chrNW_004936478:7,278,147...7,318,458
JBrowse link
G Avpr1b arginine vasopressin receptor 1B involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936557:6,415,544...6,423,863
Ensembl chrNW_004936557:6,415,547...6,424,711
JBrowse link
G Cd244 CD244 molecule involved_in ISO (PMID:8376943) UniProt PMID:8376943 NCBI chrNW_004936903:146,108...162,410 JBrowse link
G Ntsr1 neurotensin receptor 1 ISO RGD PMID:11861328 RGD:9743897 NCBI chrNW_004936514:10,240,990...10,272,859
Ensembl chrNW_004936514:10,241,020...10,272,816
JBrowse link
G Ptafr platelet activating factor receptor ISO RGD PMID:8798508 RGD:9999203 NCBI chrNW_004936474:12,333,905...12,337,140
Ensembl chrNW_004936474:12,336,071...12,337,099
JBrowse link
G Pth parathyroid hormone involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936528:5,081,569...5,084,030
Ensembl chrNW_004936528:5,083,596...5,084,030
JBrowse link
G Pth1r parathyroid hormone 1 receptor involved_in ISO PMID:19608645 BHF-UCL PMID:19608645 RGD:8553376 NCBI chrNW_004936596:674,088...693,191
Ensembl chrNW_004936596:674,088...693,213
JBrowse link
G Snca synuclein alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936685:2,077,017...2,175,298
Ensembl chrNW_004936685:2,076,651...2,175,338
JBrowse link
positive regulation of inositol trisphosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gper1 G protein-coupled estrogen receptor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936754:1,288,891...1,293,555
Ensembl chrNW_004936754:1,288,912...1,293,427
JBrowse link
G Lhcgr luteinizing hormone/choriogonadotropin receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936508:3,928,467...3,983,481
Ensembl chrNW_004936508:3,928,466...3,983,890
JBrowse link
G Myh9 myosin heavy chain 9 ISO RGD PMID:20068007 RGD:6902910 NCBI chrNW_004936492:4,384,215...4,466,229
Ensembl chrNW_004936492:4,384,215...4,466,262
JBrowse link
G P2ry1 purinergic receptor P2Y1 involved_in ISO PMID:11390975 BHF-UCL PMID:11390975 RGD:8553380 NCBI chrNW_004936519:865,756...872,466
Ensembl chrNW_004936519:866,208...872,393
JBrowse link
G P2ry6 pyrimidinergic receptor P2Y6 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936498:2,468,020...2,501,344
Ensembl chrNW_004936498:2,500,128...2,501,114
JBrowse link
G Plcd1 phospholipase C delta 1 ISO RGD PMID:16709602 RGD:2300424 NCBI chrNW_004936473:27,364,404...27,387,337
Ensembl chrNW_004936473:27,364,389...27,387,412
JBrowse link
G Pou1f1 POU class 1 homeobox 1 acts_upstream_of_or_within ISO (MGI:2135699|PMID:11371619) MGI PMID:11371619 MGI:2135699 NCBI chrNW_004936610:2,262,715...2,279,098
Ensembl chrNW_004936610:2,262,715...2,279,098
JBrowse link
regulation of inositol trisphosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ptk2b protein tyrosine kinase 2 beta involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936675:216,970...325,670
Ensembl chrNW_004936675:275,288...324,810
JBrowse link
sorbitol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akr1b1 aldo-keto reductase family 1 member B ISO RGD PMID:6690344 PMID:21376710 RGD:1626096 RGD:8548687 NCBI chrNW_004936579:1,312,175...1,328,397 JBrowse link
sorbitol catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sord sorbitol dehydrogenase involved_in IEA Ensembl
UniProt
GO_REF:0000104 GO_REF:0000107 NCBI chrNW_004936471:7,760,097...7,805,475
Ensembl chrNW_004936471:7,760,052...7,795,671
JBrowse link
sorbitol metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sord sorbitol dehydrogenase acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:55679|PMID:6626150), (MGI:60299|PMID:722274) MGI
Ensembl
PMID:722274 PMID:6626150 GO_REF:0000107 MGI:55679 MGI:60299 NCBI chrNW_004936471:7,760,097...7,805,475
Ensembl chrNW_004936471:7,760,052...7,795,671
JBrowse link
sphinganine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC101967158 serine palmitoyltransferase 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1098386|PMID:9363775) MGI
Ensembl
PMID:9363775 GO_REF:0000107 MGI:1098386 NCBI chrNW_004936488:6,313,189...6,404,425
Ensembl chrNW_004936488:6,289,833...6,296,849
Ensembl chrNW_004936488:6,289,833...6,296,849
JBrowse link
G Sptlc1 serine palmitoyltransferase long chain base subunit 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3846467|PMID:19416652) MGI
Ensembl
PMID:19416652 GO_REF:0000107 MGI:3846467 NCBI chrNW_004936796:886,946...948,254
Ensembl chrNW_004936796:886,922...948,254
JBrowse link
sphinganine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Degs2 delta 4-desaturase, sphingolipid 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3505861|PMID:11937514)
(MGI:3694278|PMID:16571104)
MGI
Ensembl
PMID:11937514 PMID:16571104 GO_REF:0000107 MGI:3505861 MGI:3694278 NCBI chrNW_004936604:3,821,672...3,839,975
Ensembl chrNW_004936604:3,817,886...3,839,986
JBrowse link
sphingosine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca2 ATP binding cassette subfamily A member 2 acts_upstream_of_positive_effect
involved_in
ISO
IEA
(PMID:26510981) ARUK-UCL
Ensembl
PMID:26510981 GO_REF:0000107 NCBI chrNW_004936669:922,978...941,996
Ensembl chrNW_004936669:926,622...942,167
JBrowse link
G Acer1 alkaline ceramidase 1 involved_in IEA Ensembl
UniProt
GO_REF:0000107 GO_REF:0000117 NCBI chrNW_004936588:3,688,244...3,705,831
Ensembl chrNW_004936588:3,688,244...3,705,831
JBrowse link
G Acer2 alkaline ceramidase 2 involved_in IEA Ensembl
UniProt
GO_REF:0000107 GO_REF:0000117 NCBI chrNW_004936652:1,289,445...1,329,236
Ensembl chrNW_004936652:1,289,382...1,329,409
JBrowse link
G Acer3 alkaline ceramidase 3 involved_in IEA Ensembl
UniProt
GO_REF:0000107 GO_REF:0000117 NCBI chrNW_004936498:5,496,991...5,653,206
Ensembl chrNW_004936498:5,496,991...5,653,206
JBrowse link
G Asah1 N-acylsphingosine amidohydrolase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936554:104,666...141,761
Ensembl chrNW_004936554:104,229...141,512
JBrowse link
G Asah2 N-acylsphingosine amidohydrolase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936735:2,004,373...2,092,501
Ensembl chrNW_004936735:2,031,844...2,092,347
JBrowse link
G Gba1 glucosylceramidase beta 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936580:4,715,869...4,720,752
Ensembl chrNW_004936580:4,715,408...4,720,798
JBrowse link
G LOC101967158 serine palmitoyltransferase 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3814228|PMID:16216550) MGI
Ensembl
PMID:16216550 GO_REF:0000107 MGI:3814228 NCBI chrNW_004936488:6,313,189...6,404,425
Ensembl chrNW_004936488:6,289,833...6,296,849
Ensembl chrNW_004936488:6,289,833...6,296,849
JBrowse link
G Sphk1 sphingosine kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936594:1,482,830...1,489,337
Ensembl chrNW_004936594:1,486,111...1,489,188
JBrowse link
G Sphk2 sphingosine kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936664:2,668,708...2,676,608
Ensembl chrNW_004936664:2,669,920...2,676,587
JBrowse link
G Sptlc1 serine palmitoyltransferase long chain base subunit 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3814228|PMID:16216550) MGI
Ensembl
PMID:16216550 GO_REF:0000107 MGI:3814228 NCBI chrNW_004936796:886,946...948,254
Ensembl chrNW_004936796:886,922...948,254
JBrowse link
G Sptlc3 serine palmitoyltransferase long chain base subunit 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936485:6,647,930...6,784,792
Ensembl chrNW_004936485:6,644,188...6,784,828
JBrowse link
G Sptssa serine palmitoyltransferase small subunit A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936494:8,717,821...8,738,923
Ensembl chrNW_004936494:8,716,829...8,739,066
JBrowse link
G Sptssb serine palmitoyltransferase small subunit B involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936708:1,270,720...1,301,493
Ensembl chrNW_004936708:1,271,190...1,271,420
JBrowse link
sphingosine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Asah2 N-acylsphingosine amidohydrolase 2 involved_in ISO (PMID:16229686), (PMID:17475390), (PMID:26190575)
(PMID:10781606), (PMID:15946935)
UniProt PMID:10781606 PMID:15946935 PMID:16229686 PMID:17475390 PMID:26190575 NCBI chrNW_004936735:2,004,373...2,092,501
Ensembl chrNW_004936735:2,031,844...2,092,347
JBrowse link
G Naaa N-acylethanolamine acid amidase involved_in ISO (PMID:15655246) UniProt PMID:15655246 NCBI chrNW_004936598:42,751...56,261 JBrowse link
G Plpp1 phospholipid phosphatase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936480:12,265,304...12,357,747
Ensembl chrNW_004936480:12,265,246...12,359,450
JBrowse link
G Plpp2 phospholipid phosphatase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936588:14,422...20,467
Ensembl chrNW_004936588:14,399...20,514
JBrowse link
G Plpp3 phospholipid phosphatase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936522:4,992,333...5,074,295
Ensembl chrNW_004936522:4,992,322...5,074,313
JBrowse link
G Sgpp1 sphingosine-1-phosphate phosphatase 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2176350|PMID:11756451) MGI
Ensembl
PMID:11756451 GO_REF:0000107 MGI:2176350 NCBI chrNW_004936495:7,500,991...7,528,520
Ensembl chrNW_004936495:7,502,859...7,528,515
JBrowse link
G Sgpp2 sphingosine-1-phosphate phosphatase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936569:4,405,804...4,518,637
Ensembl chrNW_004936569:4,406,253...4,518,655
JBrowse link
G Sphk1 sphingosine kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936594:1,482,830...1,489,337
Ensembl chrNW_004936594:1,486,111...1,489,188
JBrowse link
G Sphk2 sphingosine kinase 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3608224|PMID:16093248) MGI
Ensembl
PMID:16093248 GO_REF:0000107 MGI:3608224 NCBI chrNW_004936664:2,668,708...2,676,608
Ensembl chrNW_004936664:2,669,920...2,676,587
JBrowse link
tetrahydrobiopterin biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dhfr dihydrofolate reductase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936469:67,962...83,116 JBrowse link
G Gch1 GTP cyclohydrolase 1 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936697:232,048...275,420 JBrowse link
G LOC101968888 sepiapterin reductase-like involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936491:16,715,851...16,744,284 JBrowse link
G Pcbd1 pterin-4 alpha-carbinolamine dehydratase 1 involved_in IEA UniProt
InterPro
GO_REF:0000002 GO_REF:0000043 NCBI chrNW_004936521:7,843,945...7,847,827
Ensembl chrNW_004936521:7,845,870...7,848,426
JBrowse link
G Pcbd2 pterin-4 alpha-carbinolamine dehydratase 2 involved_in IEA InterPro
UniProt
GO_REF:0000002 GO_REF:0000043 NCBI chrNW_004936597:2,113,428...2,161,329
Ensembl chrNW_004936597:2,119,136...2,161,379
JBrowse link
G Pts 6-pyruvoyltetrahydropterin synthase acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1328867|PMID:9894812) MGI
InterPro
Ensembl
UniProt
PMID:9894812 GO_REF:0000002 GO_REF:0000041 GO_REF:0000043 GO_REF:0000107 MGI:1328867 NCBI chrNW_004936612:2,247,825...2,255,277
Ensembl chrNW_004936612:2,246,878...2,253,675
JBrowse link
G Qdpr quinoid dihydropteridine reductase involved_in ISO PMID:1898002 RGD
UniProt
PMID:660556 PMID:1898002 PMID:9235988 RGD:4139903 RGD:5128582 RGD:8553309 NCBI chrNW_004936477:10,687,328...10,708,015
Ensembl chrNW_004936477:10,687,276...10,708,031
JBrowse link
G Spr sepiapterin reductase involved_in ISO
IEA
RGD
InterPro
PMID:2179471 GO_REF:0000002 RGD:1600056 NCBI chrNW_004936491:16,693,940...16,699,040 JBrowse link
tetrahydrobiopterin metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Spr sepiapterin reductase acts_upstream_of_or_within ISO (MGI:3722569|PMID:16532389) MGI PMID:16532389 MGI:3722569 NCBI chrNW_004936491:16,693,940...16,699,040 JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 15022
    metabolic process 9463
      small molecule metabolic process 1517
        alcohol metabolic process 298
          polyol metabolic process 110
            1,5-anhydro-D-fructose metabolic process + 0
            2-deoxystreptamine metabolic process + 0
            alditol metabolic process + 15
            butirosin metabolic process + 0
            diol metabolic process + 31
            gentamycin metabolic process + 1
            inositol metabolic process + 9
            inositol phosphate metabolic process + 54
            kanamycin metabolic process + 0
            neomycin metabolic process + 0
            paromomycin metabolic process + 0
            phytosphingosine metabolic process + 1
            polyol biosynthetic process + 63
            polyol catabolic process + 23
            streptomycin metabolic process + 0
            tobramycin metabolic process + 0
            triethanolamine metabolic process + 0
Path 2
Term Annotations click to browse term
  biological_process 15022
    metabolic process 9463
      organic substance metabolic process 9105
        organic hydroxy compound metabolic process 470
          alcohol metabolic process 298
            polyol metabolic process 110
              1,5-anhydro-D-fructose metabolic process + 0
              2-deoxystreptamine metabolic process + 0
              alditol metabolic process + 15
              butirosin metabolic process + 0
              diol metabolic process + 31
              gentamycin metabolic process + 1
              inositol metabolic process + 9
              inositol phosphate metabolic process + 54
              kanamycin metabolic process + 0
              neomycin metabolic process + 0
              paromomycin metabolic process + 0
              phytosphingosine metabolic process + 1
              polyol biosynthetic process + 63
              polyol catabolic process + 23
              streptomycin metabolic process + 0
              tobramycin metabolic process + 0
              triethanolamine metabolic process + 0
paths to the root