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ONTOLOGY REPORT - ANNOTATIONS


Term:polyol metabolic process
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Accession:GO:0019751 term browser browse the term
Definition:The chemical reactions and pathways involving a polyol, any alcohol containing three or more hydroxyl groups attached to saturated carbon atoms.
Synonyms:exact_synonym: polyhydric alcohol metabolic process;   polyol metabolism



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polyol metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AKR1B10 aldo-keto reductase family 1 member B10 ISO RGD PMID:20709016 RGD:6903952 NCBI chr 7:134,527,567...134,541,412
Ensembl chr 7:134,527,567...134,541,412
JBrowse link
calcitriol biosynthetic process from calciol term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CYP27A1 cytochrome P450 family 27 subfamily A member 1 involved_in IDA
IBA
(PMID:15465040)
(PMID:21873635)
UniProt
GO_Central
UniProt
GO_Central
PMID:15465040 PMID:21873635 NCBI chr 2:218,782,147...218,815,293
Ensembl chr 2:218,781,749...218,815,293
JBrowse link
G CYP27B1 cytochrome P450 family 27 subfamily B member 1 involved_in IBA
IDA
IEA
(PMID:21873635)
(PMID:15795327), (PMID:16549446), (PMID:17023519), (PMID:22862690), (PMID:9415400)
GO_Central
BHF-UCL
Ensembl
GO_Central
BHF-UCL
PMID:9415400 PMID:15795327 PMID:16549446 PMID:17023519 PMID:21873635 More... GO_REF:0000107 NCBI chr12:57,762,334...57,767,078
Ensembl chr12:57,762,334...57,768,986
JBrowse link
G CYP2R1 cytochrome P450 family 2 subfamily R member 1 involved_in IDA (PMID:15465040), (PMID:18511070) UniProt
UniProt
PMID:15465040 PMID:18511070 NCBI chr11:14,877,440...14,892,443
Ensembl chr11:14,877,440...14,892,231
JBrowse link
G CYP3A4 cytochrome P450 family 3 subfamily A member 4 involved_in IEA GOC
GOC
GO_REF:0000108 NCBI chr 7:99,756,967...99,784,184
Ensembl chr 7:99,756,960...99,784,248
JBrowse link
diol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EPHX1 epoxide hydrolase 1 ISO RGD PMID:2507189 RGD:11252156 NCBI chr 1:225,810,124...225,845,563
Ensembl chr 1:225,810,124...225,845,563
JBrowse link
diol metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LRP2 LDL receptor related protein 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1331347|PMID:10052453) MGI
Ensembl
PMID:10052453 GO_REF:0000107 MGI:1331347 NCBI chr 2:169,127,109...169,362,534
Ensembl chr 2:169,127,109...169,362,534
JBrowse link
diphosphoinositol polyphosphate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NUDT3 nudix hydrolase 3 involved_in IDA (PMID:10585413) UniProt
UniProt
PMID:10585413 NCBI chr 6:34,279,679...34,392,669
Ensembl chr 6:34,279,679...34,392,669
JBrowse link
diphosphoinositol polyphosphate metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NUDT10 nudix hydrolase 10 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr  X:51,332,231...51,337,525
Ensembl chr  X:51,332,231...51,337,525
JBrowse link
G NUDT11 nudix hydrolase 11 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr  X:51,490,011...51,496,592
Ensembl chr  X:51,490,011...51,496,592
JBrowse link
G NUDT3 nudix hydrolase 3 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr 6:34,279,679...34,392,669
Ensembl chr 6:34,279,679...34,392,669
JBrowse link
G NUDT4 nudix hydrolase 4 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr12:93,377,925...93,408,146
Ensembl chr12:93,377,883...93,408,146
JBrowse link
G NUDT4B nudix hydrolase 4B involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr 1:148,748,774...148,752,415
Ensembl chr 1:148,748,774...148,752,415
JBrowse link
galactitol metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GALK1 galactokinase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:1861531|PMID:10915771) Ensembl
Ensembl
MGI
PMID:10915771 GO_REF:0000107 MGI:1861531 NCBI chr17:75,751,469...75,765,192
Ensembl chr17:75,751,594...75,765,236
JBrowse link
gentamycin metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SLC34A1 solute carrier family 34 member 1 involved_in IEA
ISO
Ensembl
RGD
Ensembl
PMID:11231357 GO_REF:0000107 RGD:7243145 NCBI chr 5:177,384,434...177,412,021
Ensembl chr 5:177,379,235...177,398,848
JBrowse link
glycerol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GOT1 glutamic-oxaloacetic transaminase 1 involved_in
acts_upstream_of_or_within
ISS
IEA
ISO
(MGI:3722000|PMID:17545671) UniProt
UniProt
Ensembl
MGI
PMID:17545671 GO_REF:0000024 GO_REF:0000107 MGI:3722000 NCBI chr10:99,396,870...99,430,624
Ensembl chr10:99,396,870...99,430,624
JBrowse link
G LEP leptin involved_in IEA
ISO
Ensembl
Ensembl
RGD
PMID:21068181 GO_REF:0000107 RGD:5128556 NCBI chr 7:128,241,278...128,257,629
Ensembl chr 7:128,241,278...128,257,629
JBrowse link
G PGP phosphoglycolate phosphatase involved_in IDA
IEA
(PMID:26755581) UniProt
Ensembl
UniProt
PMID:26755581 GO_REF:0000107 NCBI chr16:2,211,593...2,214,840
Ensembl chr16:2,211,593...2,214,840
JBrowse link
glycerol biosynthetic process from pyruvate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PCK1 phosphoenolpyruvate carboxykinase 1 involved_in
acts_upstream_of_or_within
IBA
IEA
ISS
ISO
(PMID:21873635)
(MGI:2157262|PMID:11792850)
GO_Central
Ensembl
BHF-UCL
GO_Central
MGI
BHF-UCL
PMID:11792850 PMID:21873635 GO_REF:0000024 GO_REF:0000107 MGI:2157262 NCBI chr20:57,561,110...57,568,121
Ensembl chr20:57,561,080...57,568,121
JBrowse link
G PCK2 phosphoenolpyruvate carboxykinase 2, mitochondrial involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr14:24,094,171...24,104,125
Ensembl chr14:24,094,053...24,110,598
JBrowse link
glycerol catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GK glycerol kinase involved_in IEA UniProt
UniProt
GO_REF:0000041 NCBI chr  X:30,653,423...30,731,462
Ensembl chr  X:30,653,359...30,731,462
JBrowse link
G GK2 glycerol kinase 2 involved_in IEA UniProt
UniProt
GO_REF:0000041 NCBI chr 4:79,406,361...79,408,228
Ensembl chr 4:79,406,361...79,408,228
JBrowse link
G GK3 glycerol kinase 3 involved_in IEA UniProt
UniProt
GO_REF:0000041 NCBI chr 4:165,277,807...165,279,704
Ensembl chr 4:165,277,807...165,279,704
JBrowse link
G GK5 glycerol kinase 5 involved_in IEA UniProt
UniProt
GO_REF:0000041 NCBI chr 3:142,157,527...142,225,585
Ensembl chr 3:142,157,527...142,225,592
JBrowse link
G GPD2 glycerol-3-phosphate dehydrogenase 2 involved_in IEA UniProt
UniProt
GO_REF:0000041 NCBI chr 2:156,400,281...156,586,403
Ensembl chr 2:156,435,290...156,613,735
JBrowse link
G TKFC triokinase and FMN cyclase involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr11:61,333,228...61,353,426
Ensembl chr11:61,333,220...61,353,295
JBrowse link
G TPI1 triosephosphate isomerase 1 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr12:6,867,420...6,870,948
Ensembl chr12:6,867,119...6,870,948
JBrowse link
glycerol metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANGPTL3 angiopoietin like 3 involved_in IDA (PMID:12565906) BHF-UCL
BHF-UCL
PMID:12565906 NCBI chr 1:62,597,520...62,606,313
Ensembl chr 1:62,597,520...62,606,313
JBrowse link
G COQ2 coenzyme Q2, polyprenyltransferase involved_in IGI (PMID:15153069) UniProt
UniProt
PMID:15153069 NCBI chr 4:83,263,824...83,285,134
Ensembl chr 4:83,261,536...83,284,914
JBrowse link
G COQ3 coenzyme Q3, methyltransferase involved_in IGI (PMID:10777520) UniProt
UniProt
PMID:10777520 NCBI chr 6:99,369,401...99,394,195
Ensembl chr 6:99,369,401...99,394,195
JBrowse link
G DGAT2 diacylglycerol O-acyltransferase 2 involved_in IEA UniProt
UniProt
GO_REF:0000043 NCBI chr11:75,768,778...75,801,534
Ensembl chr11:75,759,512...75,801,535
JBrowse link
G DYSF dysferlin acts_upstream_of_or_within ISO (MGI:5548046|PMID:24177035) MGI PMID:24177035 MGI:5548046 NCBI chr 2:71,453,561...71,686,763
Ensembl chr 2:71,453,561...71,686,763
JBrowse link
G GK glycerol kinase involved_in
acts_upstream_of_or_within
IBA
IEA
IMP
ISO
(PMID:21873635)
(PMID:8499898)
(MGI:1097749|PMID:9302256), (MGI:3587535|PMID:16105550), (MGI:5051890|PMID:21536471)
GO_Central
GO_Central
UniProt
BHF-UCL
MGI
BHF-UCL
PMID:8499898 PMID:9302256 PMID:16105550 PMID:21536471 PMID:21873635 GO_REF:0000043 MGI:1097749 MGI:3587535 MGI:5051890 NCBI chr  X:30,653,423...30,731,462
Ensembl chr  X:30,653,359...30,731,462
JBrowse link
G GK2 glycerol kinase 2 involved_in IBA
IEA
(PMID:21873635) GO_Central
GO_Central
UniProt
PMID:21873635 GO_REF:0000043 NCBI chr 4:79,406,361...79,408,228
Ensembl chr 4:79,406,361...79,408,228
JBrowse link
G GK3 glycerol kinase 3 involved_in IBA
IEA
(PMID:21873635) GO_Central
GO_Central
UniProt
PMID:21873635 GO_REF:0000043 NCBI chr 4:165,277,807...165,279,704
Ensembl chr 4:165,277,807...165,279,704
JBrowse link
G GK5 glycerol kinase 5 involved_in IBA
IEA
(PMID:21873635) GO_Central
GO_Central
UniProt
PMID:21873635 GO_REF:0000043 NCBI chr 3:142,157,527...142,225,585
Ensembl chr 3:142,157,527...142,225,592
JBrowse link
G MOGAT1 monoacylglycerol O-acyltransferase 1 involved_in IEA UniProt
UniProt
GO_REF:0000043 NCBI chr 2:222,671,658...222,709,930
Ensembl chr 2:222,671,658...222,709,930
JBrowse link
G MOGAT2 monoacylglycerol O-acyltransferase 2 involved_in IEA UniProt
UniProt
GO_REF:0000043 NCBI chr11:75,717,838...75,732,953
Ensembl chr11:75,717,838...75,732,958
JBrowse link
G MOGAT3 monoacylglycerol O-acyltransferase 3 involved_in IEA UniProt
UniProt
GO_REF:0000043 NCBI chr 7:101,192,886...101,201,036
Ensembl chr 7:101,195,007...101,201,038
JBrowse link
G MYOF myoferlin acts_upstream_of_or_within ISO (MGI:5548046|PMID:24177035) MGI PMID:24177035 MGI:5548046 NCBI chr10:93,306,429...93,482,334
Ensembl chr10:93,306,429...93,482,334
JBrowse link
G PLA2G4A phospholipase A2 group IVA involved_in IEA UniProt
UniProt
GO_REF:0000043 NCBI chr 1:186,828,949...186,988,981
Ensembl chr 1:186,828,949...186,988,981
JBrowse link
G SHPK sedoheptulokinase involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr17:3,608,240...3,636,250
Ensembl chr17:3,608,240...3,636,250
JBrowse link
G TKFC triokinase and FMN cyclase involved_in IEA InterPro
InterPro
GO_REF:0000002 NCBI chr11:61,333,228...61,353,426
Ensembl chr11:61,333,220...61,353,295
JBrowse link
inositol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G IMPA1 inositol monophosphatase 1 involved_in IEA UniProt
UniProt
GO_REF:0000041 NCBI chr 8:81,656,914...81,686,325
Ensembl chr 8:81,656,914...81,686,331
JBrowse link
G IMPA2 inositol monophosphatase 2 involved_in IEA UniProt
UniProt
GO_REF:0000041 NCBI chr18:11,981,507...12,030,877
Ensembl chr18:11,981,025...12,030,877
JBrowse link
G ISYNA1 inositol-3-phosphate synthase 1 involved_in IBA
IEA
IGI
(PMID:21873635)
(PMID:23902760)
GO_Central
Ensembl
UniProt
GO_Central
InterPro
InterPro
UniProt
PMID:21873635 PMID:23902760 GO_REF:0000002 GO_REF:0000041 GO_REF:0000043 GO_REF:0000107 NCBI chr19:18,434,388...18,438,133
Ensembl chr19:18,434,388...18,438,167
JBrowse link
inositol catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MIOX myo-inositol oxygenase involved_in IEA
IDA
IBA
ISS
(PMID:18364358)
(PMID:21873635)
UniProt
UniProt
GO_Central
InterPro
GO_Central
PMID:18364358 PMID:21873635 GO_REF:0000002 GO_REF:0000024 GO_REF:0000104 NCBI chr22:50,486,859...50,490,648
Ensembl chr22:50,486,784...50,490,648
JBrowse link
inositol metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G IMPA1 inositol monophosphatase 1 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr 8:81,656,914...81,686,325
Ensembl chr 8:81,656,914...81,686,331
JBrowse link
G IMPA2 inositol monophosphatase 2 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr18:11,981,507...12,030,877
Ensembl chr18:11,981,025...12,030,877
JBrowse link
G ITPKA inositol-trisphosphate 3-kinase A involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:1314771|PMID:10454357) Ensembl
Ensembl
MGI
PMID:10454357 GO_REF:0000107 MGI:1314771 NCBI chr15:41,493,874...41,503,551
Ensembl chr15:41,493,393...41,503,551
JBrowse link
G MECP2 methyl-CpG binding protein 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3769075|PMID:17237885) Ensembl
Ensembl
MGI
PMID:17237885 GO_REF:0000107 MGI:3769075 NCBI chr  X:154,021,573...154,097,717
Ensembl chr  X:154,021,573...154,137,103
JBrowse link
G PPIP5K1 diphosphoinositol pentakisphosphate kinase 1 involved_in IBA
IDA
(PMID:21873635)
(PMID:17412958)
GO_Central
GO_Central
UniProt
UniProt
PMID:17412958 PMID:21873635 NCBI chr15:43,533,475...43,590,253
Ensembl chr15:43,533,462...43,590,208
JBrowse link
G PPIP5K2 diphosphoinositol pentakisphosphate kinase 2 involved_in IBA
ISS
(PMID:21873635) GO_Central
GO_Central
UniProt
UniProt
PMID:21873635 GO_REF:0000024 NCBI chr 5:103,120,301...103,212,799
Ensembl chr 5:103,120,149...103,212,799
JBrowse link
G SLC5A3 solute carrier family 5 member 3 involved_in
acts_upstream_of_or_within
IBA
IEA
ISO
(PMID:21873635)
(MGI:3654617|PMID:16644257), (MGI:3812279|PMID:18675571)
GO_Central
Ensembl
GO_Central
MGI
PMID:16644257 PMID:18675571 PMID:21873635 GO_REF:0000107 MGI:3654617 MGI:3812279 NCBI chr21:34,073,578...34,106,260
Ensembl chr21:34,073,578...34,106,260
JBrowse link
inositol phosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FGF2 fibroblast growth factor 2 involved_in IDA (PMID:20011604) DFLAT
DFLAT
PMID:20011604 NCBI chr 4:122,826,682...122,898,236
Ensembl chr 4:122,826,708...122,898,236
JBrowse link
G IP6K1 inositol hexakisphosphate kinase 1 involved_in IBA
IEA
(PMID:21873635) GO_Central
GO_Central
InterPro
InterPro
PMID:21873635 GO_REF:0000002 NCBI chr 3:49,724,294...49,786,542
Ensembl chr 3:49,724,294...49,786,542
JBrowse link
G IP6K2 inositol hexakisphosphate kinase 2 involved_in IEA
IBA
(PMID:21873635) InterPro
GO_Central
InterPro
GO_Central
PMID:21873635 GO_REF:0000002 NCBI chr 3:48,688,003...48,717,221
Ensembl chr 3:48,688,003...48,740,353
JBrowse link
G IP6K3 inositol hexakisphosphate kinase 3 involved_in
acts_upstream_of_or_within
IBA
IDA
IEA
(PMID:21873635)
(PMID:11502751)
GO_Central
MGI
GO_Central
InterPro
MGI
InterPro
PMID:11502751 PMID:21873635 GO_REF:0000002 NCBI chr 6:33,721,662...33,762,145
Ensembl chr 6:33,721,662...33,746,905
JBrowse link
G IPMK inositol polyphosphate multikinase involved_in
acts_upstream_of_or_within
IBA
IEA
ISO
(PMID:21873635)
(MGI:3583505|PMID:15939867)
GO_Central
InterPro
GO_Central
MGI
PMID:15939867 PMID:21873635 GO_REF:0000002 MGI:3583505 NCBI chr10:58,191,517...58,267,894
Ensembl chr10:58,191,517...58,267,894
JBrowse link
G IPPK inositol-pentakisphosphate 2-kinase involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr 9:92,613,183...92,670,131
Ensembl chr 9:92,613,183...92,670,131
JBrowse link
G ITPKA inositol-trisphosphate 3-kinase A involved_in IEA
IBA
(PMID:21873635) InterPro
InterPro
GO_Central
GO_Central
PMID:21873635 GO_REF:0000002 NCBI chr15:41,493,874...41,503,551
Ensembl chr15:41,493,393...41,503,551
JBrowse link
G ITPKB inositol-trisphosphate 3-kinase B involved_in IBA
IEA
(PMID:21873635) GO_Central
InterPro
GO_Central
PMID:21873635 GO_REF:0000002 NCBI chr 1:226,631,690...226,739,282
Ensembl chr 1:226,631,690...226,739,323
JBrowse link
G ITPKC inositol-trisphosphate 3-kinase C involved_in IBA
IEA
(PMID:21873635) GO_Central
GO_Central
InterPro
InterPro
PMID:21873635 GO_REF:0000002 NCBI chr19:40,717,112...40,740,860
Ensembl chr19:40,717,112...40,740,860
JBrowse link
G PPIP5K1 diphosphoinositol pentakisphosphate kinase 1 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr15:43,533,475...43,590,253
Ensembl chr15:43,533,462...43,590,208
JBrowse link
G PPIP5K2 diphosphoinositol pentakisphosphate kinase 2 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr 5:103,120,301...103,212,799
Ensembl chr 5:103,120,149...103,212,799
JBrowse link
inositol phosphate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NTSR1 neurotensin receptor 1 involved_in IEA
ISO
Ensembl
Ensembl
RGD
PMID:15707678 GO_REF:0000107 RGD:9743914 NCBI chr20:62,708,836...62,762,771
Ensembl chr20:62,708,836...62,762,771
JBrowse link
inositol phosphate dephosphorylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BPNT1 3'(2'), 5'-bisphosphate nucleotidase 1 involved_in IEA InterPro
InterPro
GO_REF:0000002 NCBI chr 1:220,057,482...220,089,788
Ensembl chr 1:220,057,482...220,090,462
JBrowse link
G BPNT2 3'(2'), 5'-bisphosphate nucleotidase 2 involved_in IEA InterPro
InterPro
GO_REF:0000002 NCBI chr 8:56,957,931...56,993,867
Ensembl chr 8:56,957,931...56,993,867
JBrowse link
G IMPA1 inositol monophosphatase 1 involved_in
acts_upstream_of_or_within
IEA
IBA
IDA
(PMID:21873635)
(PMID:17068342)
(PMID:9462881)
InterPro
GO_Central
InterPro
MGI
UniProt
MGI
UniProt
GO_Central
PMID:9462881 PMID:17068342 PMID:21873635 GO_REF:0000002 NCBI chr 8:81,656,914...81,686,325
Ensembl chr 8:81,656,914...81,686,331
JBrowse link
G IMPA2 inositol monophosphatase 2 involved_in
acts_upstream_of_or_within
IBA
IDA
IEA
(PMID:21873635)
(PMID:17068342)
GO_Central
MGI
InterPro
GO_Central
MGI
InterPro
PMID:17068342 PMID:21873635 GO_REF:0000002 NCBI chr18:11,981,507...12,030,877
Ensembl chr18:11,981,025...12,030,877
JBrowse link
G INPP1 inositol polyphosphate-1-phosphatase involved_in IBA
IEA
(PMID:21873635) GO_Central
InterPro
GO_Central
InterPro
PMID:21873635 GO_REF:0000002 NCBI chr 2:190,343,589...190,371,665
Ensembl chr 2:190,343,570...190,371,665
JBrowse link
G INPP4B inositol polyphosphate-4-phosphatase type II B involved_in
acts_upstream_of_or_within
IEA
ISO
PMID:9295334 Ensembl
Ensembl
MGI
PMID:9295334 GO_REF:0000107 RGD:633135 NCBI chr 4:142,023,160...142,846,535
Ensembl chr 4:142,023,160...142,847,432
JBrowse link
G INPP5A inositol polyphosphate-5-phosphatase A acts_upstream_of_or_within
involved_in
IDA
IBA
(PMID:8006039)
(PMID:21873635)
MGI
GO_Central
MGI
GO_Central
PMID:8006039 PMID:21873635 NCBI chr10:132,537,787...132,783,480
Ensembl chr10:132,537,787...132,783,480
JBrowse link
G INPP5B inositol polyphosphate-5-phosphatase B involved_in IBA
IEA
(PMID:21873635) GO_Central
InterPro
PMID:21873635 GO_REF:0000002 NCBI chr 1:37,860,697...37,947,057
Ensembl chr 1:37,860,697...37,947,057
JBrowse link
G INPP5E inositol polyphosphate-5-phosphatase E involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:1861829|PMID:10806194) Ensembl
Ensembl
MGI
PMID:10806194 GO_REF:0000107 MGI:1861829 NCBI chr 9:136,428,619...136,439,845
Ensembl chr 9:136,428,619...136,439,845
JBrowse link
G INPP5J inositol polyphosphate-5-phosphatase J involved_in IBA
IEA
(PMID:21873635) GO_Central
InterPro
PMID:21873635 GO_REF:0000002 NCBI chr22:31,122,923...31,134,697
Ensembl chr22:31,122,731...31,134,697
JBrowse link
G INPP5K inositol polyphosphate-5-phosphatase K involved_in
acts_upstream_of_or_within
IBA
IEA
IDA
(PMID:21873635)
(PMID:12536145)
GO_Central
InterPro
MGI
MGI
PMID:12536145 PMID:21873635 GO_REF:0000002 NCBI chr17:1,494,577...1,516,612
Ensembl chr17:1,494,577...1,516,742
JBrowse link
G MTMR2 myotubularin related protein 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3619505|PMID:16399794) Ensembl
Ensembl
MGI
PMID:16399794 GO_REF:0000107 MGI:3619505 NCBI chr11:95,832,880...95,924,107
Ensembl chr11:95,821,766...95,925,315
JBrowse link
G MTMR7 myotubularin related protein 7 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2673068|PMID:12890864) Ensembl
Ensembl
MGI
PMID:12890864 GO_REF:0000107 MGI:2673068 NCBI chr 8:17,296,794...17,413,351
Ensembl chr 8:17,296,794...17,413,528
JBrowse link
G OCRL OCRL inositol polyphosphate-5-phosphatase involved_in IBA
IEA
(PMID:21873635) GO_Central
InterPro
PMID:21873635 GO_REF:0000002 NCBI chr  X:129,540,259...129,592,556
Ensembl chr  X:129,539,849...129,592,561
JBrowse link
G PTEN phosphatase and tensin homolog involved_in IDA
IEA
ISO
(PMID:9593664) UniProt
UniProt
InterPro
RGD
PMID:9593664 PMID:18056380 GO_REF:0000002 GO_REF:0000104 RGD:2292524 NCBI chr10:87,863,625...87,971,930
Ensembl chr10:87,862,638...87,971,930
JBrowse link
G PTH2 parathyroid hormone 2 involved_in IEA InterPro GO_REF:0000002 NCBI chr19:49,422,419...49,423,441
Ensembl chr19:49,422,419...49,423,441
JBrowse link
G SYNJ1 synaptojanin 1 involved_in
acts_upstream_of_or_within
ISS
IEA
ISO
IBA
(MGI:1346710|PMID:10535736)
(PMID:21873635)
ParkinsonsUK-UCL
InterPro
ParkinsonsUK-UCL
MGI
GO_Central
PMID:10535736 PMID:21873635 GO_REF:0000002 GO_REF:0000024 MGI:1346710 NCBI chr21:32,628,759...32,728,040
Ensembl chr21:32,628,759...32,728,040
JBrowse link
G SYNJ2 synaptojanin 2 involved_in IBA
IEA
ISO
(PMID:21873635) GO_Central
InterPro
RGD
PMID:9388224 PMID:21873635 GO_REF:0000002 RGD:69390 NCBI chr 6:157,981,296...158,099,176
Ensembl chr 6:157,981,863...158,099,176
JBrowse link
inositol phosphate metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GALR2 galanin receptor 2 involved_in IEA
ISO
Ensembl
Ensembl
RGD
PMID:9427506 GO_REF:0000107 RGD:69840 NCBI chr17:76,071,962...76,077,537
Ensembl chr17:76,074,781...76,077,537
JBrowse link
G GRK3 G protein-coupled receptor kinase 3 ISO RGD PMID:17573483 RGD:5685371 NCBI chr22:25,564,675...25,729,294
Ensembl chr22:25,564,675...25,729,294
JBrowse link
G HTR2B 5-hydroxytryptamine receptor 2B ISO RGD PMID:1331748 RGD:9727450 NCBI chr 2:231,108,230...231,125,042
Ensembl chr 2:231,108,230...231,125,042
JBrowse link
G INPP4A inositol polyphosphate-4-phosphatase type I A involved_in TAS Reactome
Reactome
Reactome:R-HSA-1855183 NCBI chr 2:98,444,587...98,594,392
Ensembl chr 2:98,444,854...98,594,392
JBrowse link
G INPP4B inositol polyphosphate-4-phosphatase type II B involved_in TAS Reactome
Reactome
Reactome:R-HSA-1855183 NCBI chr 4:142,023,160...142,846,535
Ensembl chr 4:142,023,160...142,847,432
JBrowse link
G INPP5A inositol polyphosphate-5-phosphatase A involved_in TAS Reactome
Reactome
Reactome:R-HSA-1855183 NCBI chr10:132,537,787...132,783,480
Ensembl chr10:132,537,787...132,783,480
JBrowse link
G INPP5B inositol polyphosphate-5-phosphatase B involved_in TAS Reactome
Reactome
Reactome:R-HSA-1855183 Reactome:R-HSA-1855204 NCBI chr 1:37,860,697...37,947,057
Ensembl chr 1:37,860,697...37,947,057
JBrowse link
G INPP5J inositol polyphosphate-5-phosphatase J involved_in TAS Reactome
Reactome
Reactome:R-HSA-1855183 NCBI chr22:31,122,923...31,134,697
Ensembl chr22:31,122,731...31,134,697
JBrowse link
G IP6K1 inositol hexakisphosphate kinase 1 involved_in TAS Reactome
Reactome
Reactome:R-HSA-1855167 Reactome:R-HSA-1855191 NCBI chr 3:49,724,294...49,786,542
Ensembl chr 3:49,724,294...49,786,542
JBrowse link
G IP6K2 inositol hexakisphosphate kinase 2 involved_in TAS
IDA
(PMID:30624931) Reactome
Reactome
UniProt
UniProt
PMID:30624931 Reactome:R-HSA-1855191 NCBI chr 3:48,688,003...48,717,221
Ensembl chr 3:48,688,003...48,740,353
JBrowse link
G IP6K3 inositol hexakisphosphate kinase 3 involved_in TAS Reactome
Reactome
Reactome:R-HSA-1855167 NCBI chr 6:33,721,662...33,762,145
Ensembl chr 6:33,721,662...33,746,905
JBrowse link
G IPMK inositol polyphosphate multikinase involved_in TAS Reactome
Reactome
Reactome:R-HSA-1855191 NCBI chr10:58,191,517...58,267,894
Ensembl chr10:58,191,517...58,267,894
JBrowse link
G IPPK inositol-pentakisphosphate 2-kinase involved_in TAS Reactome
Reactome
Reactome:R-HSA-1855167 Reactome:R-HSA-1855191 NCBI chr 9:92,613,183...92,670,131
Ensembl chr 9:92,613,183...92,670,131
JBrowse link
G MINPP1 multiple inositol-polyphosphate phosphatase 1 involved_in TAS Reactome
Reactome
Reactome:R-HSA-1855231 NCBI chr10:87,504,893...87,553,461
Ensembl chr10:87,504,875...87,553,461
JBrowse link
G OCRL OCRL inositol polyphosphate-5-phosphatase involved_in TAS Reactome
Reactome
Reactome:R-HSA-1855183 NCBI chr  X:129,540,259...129,592,556
Ensembl chr  X:129,539,849...129,592,561
JBrowse link
G PLCD4 phospholipase C delta 4 involved_in IEA UniProt GO_REF:0000117 NCBI chr 2:218,607,899...218,637,175
Ensembl chr 2:218,607,855...218,637,184
JBrowse link
G PLCH1 phospholipase C eta 1 involved_in IEA UniProt GO_REF:0000117 NCBI chr 3:155,450,934...155,745,071
Ensembl chr 3:155,375,580...155,745,071
JBrowse link
G PLCH2 phospholipase C eta 2 involved_in IEA UniProt GO_REF:0000117 NCBI chr 1:2,415,943...2,505,532
Ensembl chr 1:2,425,980...2,505,532
JBrowse link
G PLCZ1 phospholipase C zeta 1 involved_in IEA UniProt GO_REF:0000117 NCBI chr12:18,645,609...18,738,012
Ensembl chr12:18,683,169...18,738,100
JBrowse link
G PPIP5K1 diphosphoinositol pentakisphosphate kinase 1 involved_in TAS Reactome
Reactome
Reactome:R-HSA-1855167 NCBI chr15:43,533,475...43,590,253
Ensembl chr15:43,533,462...43,590,208
JBrowse link
G PPIP5K2 diphosphoinositol pentakisphosphate kinase 2 involved_in TAS Reactome
Reactome
Reactome:R-HSA-1855167 NCBI chr 5:103,120,301...103,212,799
Ensembl chr 5:103,120,149...103,212,799
JBrowse link
G SYNJ1 synaptojanin 1 involved_in TAS Reactome
Reactome
Reactome:R-HSA-1855183 NCBI chr21:32,628,759...32,728,040
Ensembl chr21:32,628,759...32,728,040
JBrowse link
inositol phosphorylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G IPPK inositol-pentakisphosphate 2-kinase involved_in IBA
IDA
(PMID:21873635)
(PMID:12084730)
GO_Central
GO_Central
BHF-UCL
BHF-UCL
PMID:12084730 PMID:21873635 NCBI chr 9:92,613,183...92,670,131
Ensembl chr 9:92,613,183...92,670,131
JBrowse link
G ITPK1 inositol-tetrakisphosphate 1-kinase involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr14:92,936,914...93,115,925
Ensembl chr14:92,936,914...93,116,320
JBrowse link
inositol trisphosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PLCG1 phospholipase C gamma 1 ISO RGD PMID:16973916 RGD:2299886 NCBI chr20:41,137,543...41,177,626
Ensembl chr20:41,136,960...41,196,801
JBrowse link
G PLCG2 phospholipase C gamma 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:85738|PMID:9013981) Ensembl
Ensembl
MGI
PMID:9013981 GO_REF:0000107 MGI:85738 NCBI chr16:81,779,291...81,962,685
Ensembl chr16:81,779,279...81,962,685
JBrowse link
G POU1F1 POU class 1 homeobox 1 acts_upstream_of ISO (MGI:2135699|PMID:11371619) MGI PMID:11371619 MGI:2135699 NCBI chr 3:87,259,404...87,276,584
Ensembl chr 3:87,259,404...87,276,584
JBrowse link
G PTAFR platelet activating factor receptor involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:85738|PMID:9013981) Ensembl
Ensembl
MGI
PMID:9013981 GO_REF:0000107 MGI:85738 NCBI chr 1:28,147,166...28,193,856
Ensembl chr 1:28,147,166...28,193,936
JBrowse link
G SCP2 sterol carrier protein 2 involved_in IDA (PMID:12641450) UniProt
UniProt
PMID:12641450 NCBI chr 1:52,927,276...53,051,698
Ensembl chr 1:52,927,276...53,051,698
JBrowse link
inositol trisphosphate metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G INPPL1 inositol polyphosphate phosphatase like 1 ISO RGD PMID:12933696 RGD:1626126 NCBI chr11:72,223,563...72,239,147
Ensembl chr11:72,223,701...72,239,147
JBrowse link
G IPMK inositol polyphosphate multikinase involved_in IDA (PMID:30624931) UniProt
UniProt
PMID:30624931 NCBI chr10:58,191,517...58,267,894
Ensembl chr10:58,191,517...58,267,894
JBrowse link
G ITPK1 inositol-tetrakisphosphate 1-kinase involved_in IEA InterPro
InterPro
GO_REF:0000002 NCBI chr14:92,936,914...93,115,925
Ensembl chr14:92,936,914...93,116,320
JBrowse link
G ITPKB inositol-trisphosphate 3-kinase B involved_in IDA (PMID:1654894) UniProt
UniProt
PMID:1654894 NCBI chr 1:226,631,690...226,739,282
Ensembl chr 1:226,631,690...226,739,323
JBrowse link
G PLCB1 phospholipase C beta 1 involved_in ISO
IEA
RGD
Ensembl
Ensembl
PMID:8387502 GO_REF:0000107 RGD:11535163 NCBI chr20:8,132,266...8,884,900
Ensembl chr20:8,077,251...8,968,360
JBrowse link
G PLCB3 phospholipase C beta 3 ISO RGD PMID:8387502 RGD:11535163 NCBI chr11:64,251,530...64,269,452
Ensembl chr11:64,251,530...64,269,150
JBrowse link
G PLCG1 phospholipase C gamma 1 ISO RGD PMID:7812955 RGD:151356942 NCBI chr20:41,137,543...41,177,626
Ensembl chr20:41,136,960...41,196,801
JBrowse link
L-xylitol catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SORD sorbitol dehydrogenase involved_in IDA (PMID:8487505) UniProt
UniProt
PMID:8487505 NCBI chr15:45,023,195...45,077,185
Ensembl chr15:45,023,147...45,077,185
JBrowse link
L-xylitol metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SORD sorbitol dehydrogenase involved_in IDA (PMID:3365415) UniProt
UniProt
PMID:3365415 NCBI chr15:45,023,195...45,077,185
Ensembl chr15:45,023,147...45,077,185
JBrowse link
negative regulation of inositol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ISYNA1 inositol-3-phosphate synthase 1 involved_in ISO PMID:19188364 UniProt PMID:19188364 RGD:153298950 NCBI chr19:18,434,388...18,438,133
Ensembl chr19:18,434,388...18,438,167
JBrowse link
negative regulation of inositol phosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PLEK pleckstrin involved_in IDA (PMID:7559487), (PMID:7782310) BHF-UCL
BHF-UCL
PMID:7559487 PMID:7782310 NCBI chr 2:68,365,282...68,397,453
Ensembl chr 2:68,365,282...68,397,453
JBrowse link
G PRKG1 protein kinase cGMP-dependent 1 ISO RGD PMID:7535379 RGD:7777104 NCBI chr10:50,990,888...52,298,350
Ensembl chr10:50,990,888...52,298,423
JBrowse link
phytosphingosine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACER3 alkaline ceramidase 3 involved_in IDA
IBA
(PMID:11356846), (PMID:20068046)
(PMID:21873635)
UniProt
UniProt
GO_Central
GO_Central
PMID:11356846 PMID:20068046 PMID:21873635 NCBI chr11:76,860,918...77,026,797
Ensembl chr11:76,860,859...77,026,797
JBrowse link
positive regulation of inositol phosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADCYAP1R1 ADCYAP receptor type I involved_in IEA
ISO
Ensembl
Ensembl
RGD
PMID:8943280 GO_REF:0000107 RGD:2315982 NCBI chr 7:31,052,308...31,111,474
Ensembl chr 7:31,052,308...31,111,474
JBrowse link
G AVPR1B arginine vasopressin receptor 1B involved_in IDA (PMID:9322919) ARUK-UCL
ARUK-UCL
PMID:9322919 NCBI chr 1:206,106,936...206,117,388
Ensembl chr 1:206,106,936...206,117,699
JBrowse link
G CD244 CD244 molecule involved_in IDA (PMID:8376943) UniProt
UniProt
PMID:8376943 NCBI chr 1:160,830,160...160,862,887
Ensembl chr 1:160,830,160...160,862,887
JBrowse link
G MAS1 MAS1 proto-oncogene, G protein-coupled receptor involved_in ISO
IEA
RGD
Ensembl
Ensembl
PMID:1332507 GO_REF:0000107 RGD:2316794 NCBI chr 6:159,888,787...159,917,447
Ensembl chr 6:159,890,988...159,917,447
JBrowse link
G NTSR1 neurotensin receptor 1 involved_in IEA
ISO
Ensembl
Ensembl
RGD
PMID:11861328 GO_REF:0000107 RGD:9743897 NCBI chr20:62,708,836...62,762,771
Ensembl chr20:62,708,836...62,762,771
JBrowse link
G PTAFR platelet activating factor receptor involved_in ISO
IEA
RGD
Ensembl
Ensembl
PMID:8798508 GO_REF:0000107 RGD:9999203 NCBI chr 1:28,147,166...28,193,856
Ensembl chr 1:28,147,166...28,193,936
JBrowse link
G PTH parathyroid hormone involved_in IMP (PMID:11604398) CAFA
CAFA
PMID:11604398 NCBI chr11:13,492,054...13,496,181
Ensembl chr11:13,492,054...13,496,181
JBrowse link
G PTH1R parathyroid hormone 1 receptor involved_in ISS BHF-UCL
BHF-UCL
GO_REF:0000024 NCBI chr 3:46,877,721...46,903,799
Ensembl chr 3:46,877,721...46,903,799
JBrowse link
G SNCA synuclein alpha involved_in IDA (PMID:15641770) UniProt
UniProt
PMID:15641770 NCBI chr 4:89,724,099...89,838,304
Ensembl chr 4:89,700,345...89,838,315
JBrowse link
positive regulation of inositol trisphosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GPER1 G protein-coupled estrogen receptor 1 involved_in IDA (PMID:15705806) UniProt
UniProt
PMID:15705806 NCBI chr 7:1,087,118...1,093,810
Ensembl chr 7:1,082,208...1,093,815
JBrowse link
G HRH1 histamine receptor H1 involved_in ISS BHF-UCL
BHF-UCL
GO_REF:0000024 NCBI chr 3:11,137,238...11,263,557
Ensembl chr 3:11,137,093...11,263,557
JBrowse link
G LHCGR luteinizing hormone/choriogonadotropin receptor involved_in ISS
IEA
BHF-UCL
Ensembl
BHF-UCL
GO_REF:0000024 GO_REF:0000107 NCBI chr 2:48,686,774...48,755,724
Ensembl chr 2:48,686,774...48,755,730
JBrowse link
G MYH9 myosin heavy chain 9 ISO RGD PMID:20068007 RGD:6902910 NCBI chr22:36,281,280...36,387,967
Ensembl chr22:36,281,280...36,388,010
JBrowse link
G P2RY1 purinergic receptor P2Y1 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 3:152,835,131...152,841,439
Ensembl chr 3:152,835,131...152,841,439
JBrowse link
G P2RY6 pyrimidinergic receptor P2Y6 involved_in IDA
TAS
(PMID:8670200)
(PMID:17410128)
ARUK-UCL
ARUK-UCL
PMID:8670200 PMID:17410128 NCBI chr11:73,264,506...73,298,625
Ensembl chr11:73,264,498...73,305,103
JBrowse link
G PLCD1 phospholipase C delta 1 ISO RGD PMID:16709602 RGD:2300424 NCBI chr 3:38,007,496...38,029,642
Ensembl chr 3:38,007,496...38,029,642
JBrowse link
G POU1F1 POU class 1 homeobox 1 acts_upstream_of_or_within ISO (MGI:2135699|PMID:11371619) MGI PMID:11371619 MGI:2135699 NCBI chr 3:87,259,404...87,276,584
Ensembl chr 3:87,259,404...87,276,584
JBrowse link
regulation of inositol trisphosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PTK2B protein tyrosine kinase 2 beta involved_in ISS
IEA
UniProt
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr 8:27,310,506...27,459,391
Ensembl chr 8:27,311,482...27,459,391
JBrowse link
sorbitol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AKR1B1 aldo-keto reductase family 1 member B ISO RGD PMID:6690344 PMID:21376710 RGD:1626096 RGD:8548687 NCBI chr 7:134,442,350...134,459,239
Ensembl chr 7:134,442,356...134,459,284
JBrowse link
sorbitol catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SORD sorbitol dehydrogenase involved_in IMP
IEA
IBA
IDA
(PMID:32367058)
(PMID:21873635)
(PMID:12962626), (PMID:3365415), (PMID:6870831), (PMID:8487505)
FlyBase
UniProt
GO_Central
FlyBase
GO_Central
UniProt
PMID:3365415 PMID:6870831 PMID:8487505 PMID:12962626 PMID:21873635 More... GO_REF:0000104 NCBI chr15:45,023,195...45,077,185
Ensembl chr15:45,023,147...45,077,185
JBrowse link
sorbitol metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SORD sorbitol dehydrogenase acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:55679|PMID:6626150), (MGI:60299|PMID:722274) MGI
Ensembl
PMID:722274 PMID:6626150 GO_REF:0000107 MGI:55679 MGI:60299 NCBI chr15:45,023,195...45,077,185
Ensembl chr15:45,023,147...45,077,185
JBrowse link
sphinganine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SPTLC1 serine palmitoyltransferase long chain base subunit 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3846467|PMID:19416652) MGI
Ensembl
Ensembl
PMID:19416652 GO_REF:0000107 MGI:3846467 NCBI chr 9:92,031,147...92,115,413
Ensembl chr 9:92,000,087...92,115,413
JBrowse link
G SPTLC2 serine palmitoyltransferase long chain base subunit 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:1098386|PMID:9363775) Ensembl
Ensembl
MGI
PMID:9363775 GO_REF:0000107 MGI:1098386 NCBI chr14:77,505,997...77,616,637
Ensembl chr14:77,505,997...77,616,637
JBrowse link
sphinganine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DEGS2 delta 4-desaturase, sphingolipid 2 involved_in
acts_upstream_of_or_within
IBA
IEA
ISO
(PMID:21873635)
(MGI:3505861|PMID:11937514)
(MGI:3694278|PMID:16571104)
GO_Central
Ensembl
GO_Central
MGI
PMID:11937514 PMID:16571104 PMID:21873635 GO_REF:0000107 MGI:3505861 MGI:3694278 NCBI chr14:100,143,957...100,166,886
Ensembl chr14:100,143,957...100,159,645
JBrowse link
sphingosine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCA2 ATP binding cassette subfamily A member 2 acts_upstream_of_positive_effect IDA (PMID:26510981) ARUK-UCL
ARUK-UCL
PMID:26510981 NCBI chr 9:137,007,234...137,028,922
Ensembl chr 9:137,007,234...137,028,915
JBrowse link
G ACER1 alkaline ceramidase 1 involved_in IDA
IBA
IEA
IMP
(PMID:17713573), (PMID:20628055)
(PMID:21873635)
(PMID:20207939)
BHF-UCL
GO_Central
UniProt
BHF-UCL
Ensembl
UniProt
PMID:17713573 PMID:20207939 PMID:20628055 PMID:21873635 GO_REF:0000107 GO_REF:0000117 NCBI chr19:6,306,142...6,360,368
Ensembl chr19:6,306,142...6,333,612
JBrowse link
G ACER2 alkaline ceramidase 2 involved_in IDA
IBA
IEA
IMP
(PMID:16940153), (PMID:20089856), (PMID:20628055)
(PMID:21873635)
(PMID:20207939)
UniProt
GO_Central
UniProt
BHF-UCL
Ensembl
PMID:16940153 PMID:20089856 PMID:20207939 PMID:20628055 PMID:21873635 GO_REF:0000107 GO_REF:0000117 NCBI chr 9:19,409,009...19,452,505
Ensembl chr 9:19,409,009...19,452,505
JBrowse link
G ACER3 alkaline ceramidase 3 involved_in IDA
IEA
IMP
(PMID:20068046)
(PMID:20207939), (PMID:26792856)
UniProt
UniProt
Ensembl
PMID:20068046 PMID:20207939 PMID:26792856 GO_REF:0000107 GO_REF:0000117 NCBI chr11:76,860,918...77,026,797
Ensembl chr11:76,860,859...77,026,797
JBrowse link
G ASAH1 N-acylsphingosine amidohydrolase 1 involved_in IMP
IEA
IDA
(PMID:10610716)
(PMID:12815059)
UniProt
Ensembl
UniProt
PMID:10610716 PMID:12815059 GO_REF:0000107 NCBI chr 8:18,055,992...18,084,961
Ensembl chr 8:18,055,992...18,084,998
JBrowse link
G ASAH2 N-acylsphingosine amidohydrolase 2 involved_in IMP
IBA
(PMID:30154232)
(PMID:21873635)
UniProt
UniProt
GO_Central
GO_Central
PMID:21873635 PMID:30154232 NCBI chr10:50,184,861...50,251,516
Ensembl chr10:50,182,778...50,279,720
JBrowse link
G ASAH2B N-acylsphingosine amidohydrolase 2B involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr10:50,739,936...50,759,255
Ensembl chr10:50,739,318...50,816,495
JBrowse link
G GBA1 glucosylceramidase beta 1 involved_in IMP (PMID:19279011) BHF-UCL
BHF-UCL
PMID:19279011 NCBI chr 1:155,234,452...155,244,627
Ensembl chr 1:155,234,452...155,244,699
JBrowse link
G SPHK1 sphingosine kinase 1 involved_in IMP
IGI
IBA
(PMID:23106337)
(PMID:21873635)
UniProt
UniProt
GO_Central
GO_Central
PMID:21873635 PMID:23106337 NCBI chr17:76,383,204...76,387,855
Ensembl chr17:76,376,584...76,387,860
JBrowse link
G SPHK2 sphingosine kinase 2 involved_in IMP
IGI
IBA
(PMID:23106337)
(PMID:21873635)
UniProt
UniProt
GO_Central
GO_Central
PMID:21873635 PMID:23106337 NCBI chr19:48,619,506...48,630,405
Ensembl chr19:48,619,291...48,630,717
JBrowse link
G SPTLC1 serine palmitoyltransferase long chain base subunit 1 involved_in
acts_upstream_of_or_within
IBA
IDA
IEA
ISO
(PMID:21873635)
(PMID:19416851), (PMID:33558761)
(MGI:3814228|PMID:16216550)
GO_Central
GO_Central
ComplexPortal
Ensembl
ComplexPortal
MGI
PMID:16216550 PMID:19416851 PMID:21873635 PMID:33558761 GO_REF:0000107 MGI:3814228 NCBI chr 9:92,031,147...92,115,413
Ensembl chr 9:92,000,087...92,115,413
JBrowse link
G SPTLC2 serine palmitoyltransferase long chain base subunit 2 involved_in
acts_upstream_of_or_within
IBA
IDA
IEA
ISO
(PMID:21873635)
(PMID:19416851), (PMID:33558761)
(MGI:3814228|PMID:16216550)
GO_Central
GO_Central
ComplexPortal
Ensembl
ComplexPortal
MGI
PMID:16216550 PMID:19416851 PMID:21873635 PMID:33558761 GO_REF:0000107 MGI:3814228 NCBI chr14:77,505,997...77,616,637
Ensembl chr14:77,505,997...77,616,637
JBrowse link
G SPTLC3 serine palmitoyltransferase long chain base subunit 3 involved_in IBA
IDA
(PMID:21873635)
(PMID:19416851)
GO_Central
GO_Central
ComplexPortal
ComplexPortal
PMID:19416851 PMID:21873635 NCBI chr20:13,008,972...13,169,103
Ensembl chr20:13,008,972...13,169,103
JBrowse link
G SPTSSA serine palmitoyltransferase small subunit A involved_in IDA (PMID:19416851), (PMID:33558761) ComplexPortal
ComplexPortal
PMID:19416851 PMID:33558761 NCBI chr14:34,432,788...34,462,240
Ensembl chr14:34,432,788...34,462,240
JBrowse link
G SPTSSB serine palmitoyltransferase small subunit B involved_in IDA (PMID:19416851) ComplexPortal
ComplexPortal
PMID:19416851 NCBI chr 3:161,344,798...161,371,517
Ensembl chr 3:161,344,798...161,372,880
JBrowse link
sphingosine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASAH2 N-acylsphingosine amidohydrolase 2 involved_in IDA
IMP
(PMID:16229686), (PMID:17475390), (PMID:26190575)
(PMID:10781606), (PMID:15946935)
UniProt
UniProt
PMID:10781606 PMID:15946935 PMID:16229686 PMID:17475390 PMID:26190575 NCBI chr10:50,184,861...50,251,516
Ensembl chr10:50,182,778...50,279,720
JBrowse link
G NAAA N-acylethanolamine acid amidase involved_in IDA (PMID:15655246) UniProt
UniProt
PMID:15655246 NCBI chr 4:75,910,655...75,941,013
Ensembl chr 4:75,913,660...75,941,013
JBrowse link
G PLPP1 phospholipid phosphatase 1 involved_in IDA
IEA
(PMID:9705349) UniProt
UniProt
Ensembl
PMID:9705349 GO_REF:0000107 NCBI chr 5:55,424,854...55,534,964
Ensembl chr 5:55,424,854...55,534,969
JBrowse link
G PLPP2 phospholipid phosphatase 2 involved_in IDA (PMID:9705349) UniProt
UniProt
PMID:9705349 NCBI chr19:281,043...291,403
Ensembl chr19:281,040...291,403
JBrowse link
G PLPP3 phospholipid phosphatase 3 involved_in IDA (PMID:9305923), (PMID:9705349) UniProt
UniProt
PMID:9305923 PMID:9705349 NCBI chr 1:56,494,761...56,579,563
Ensembl chr 1:56,494,761...56,645,301
JBrowse link
G SGPP1 sphingosine-1-phosphate phosphatase 1 involved_in
acts_upstream_of_or_within
IBA
IEA
ISO
(PMID:21873635)
(MGI:2176350|PMID:11756451)
GO_Central
Ensembl
GO_Central
MGI
PMID:11756451 PMID:21873635 GO_REF:0000107 MGI:2176350 NCBI chr14:63,684,216...63,728,065
Ensembl chr14:63,684,216...63,728,065
JBrowse link
G SGPP2 sphingosine-1-phosphate phosphatase 2 involved_in IBA
IDA
(PMID:21873635)
(PMID:12411432)
GO_Central
UniProt
GO_Central
UniProt
PMID:12411432 PMID:21873635 NCBI chr 2:222,423,988...222,562,621
Ensembl chr 2:222,424,543...222,562,621
JBrowse link
G SPHK1 sphingosine kinase 1 involved_in IDA (PMID:20577214) UniProt
UniProt
PMID:20577214 NCBI chr17:76,383,204...76,387,855
Ensembl chr17:76,376,584...76,387,860
JBrowse link
G SPHK2 sphingosine kinase 2 involved_in
acts_upstream_of_or_within
ISS
IEA
ISO
(MGI:3608224|PMID:16093248) UniProt
UniProt
Ensembl
MGI
PMID:16093248 GO_REF:0000024 GO_REF:0000107 MGI:3608224 NCBI chr19:48,619,506...48,630,405
Ensembl chr19:48,619,291...48,630,717
JBrowse link
tetrahydrobiopterin biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DHFR dihydrofolate reductase involved_in IMP
ISS
(PMID:23707606) BHF-UCL
BHF-UCL
PMID:23707606 GO_REF:0000024 NCBI chr 5:80,626,226...80,654,983
Ensembl chr 5:80,626,226...80,654,983
JBrowse link
G DHFRP1 dihydrofolate reductase pseudogene 1 involved_in IMP
ISS
(PMID:23707606) BHF-UCL
BHF-UCL
PMID:23707606 GO_REF:0000024 NCBI chr18:26,167,862...26,171,357
Ensembl chr18:26,170,726...26,171,284
JBrowse link
G GCH1 GTP cyclohydrolase 1 involved_in IBA
IEA
IMP
IDA
(PMID:21873635)
(PMID:17101830), (PMID:19666465)
(PMID:7678411), (PMID:9445252)
GO_Central
GO_Central
UniProt
BHF-UCL
BHF-UCL
UniProt
PMID:7678411 PMID:9445252 PMID:17101830 PMID:19666465 PMID:21873635 GO_REF:0000043 NCBI chr14:54,842,017...54,902,826
Ensembl chr14:54,842,008...54,902,826
JBrowse link
G PCBD1 pterin-4 alpha-carbinolamine dehydratase 1 involved_in IEA UniProt
UniProt
InterPro
GO_REF:0000002 GO_REF:0000043 NCBI chr10:70,882,280...70,888,565
Ensembl chr10:70,882,280...70,888,565
JBrowse link
G PCBD2 pterin-4 alpha-carbinolamine dehydratase 2 involved_in IEA UniProt
InterPro
UniProt
GO_REF:0000002 GO_REF:0000043 NCBI chr 5:134,905,131...134,962,644
Ensembl chr 5:134,905,120...135,007,959
JBrowse link
G PTS 6-pyruvoyltetrahydropterin synthase involved_in
acts_upstream_of_or_within
IEA
TAS
ISO
(PMID:3308682)
(MGI:1328867|PMID:9894812)
UniProt
Ensembl
UniProt
PINC
InterPro
MGI
PMID:3308682 PMID:9894812 GO_REF:0000002 GO_REF:0000041 GO_REF:0000043 GO_REF:0000107 MGI:1328867 NCBI chr11:112,226,428...112,233,973
Ensembl chr11:112,226,367...112,269,955
JBrowse link
G QDPR quinoid dihydropteridine reductase involved_in IBA
IEA
ISO
(PMID:21873635) GO_Central
Ensembl
GO_Central
UniProt
RGD
PMID:660556 PMID:9235988 PMID:21873635 GO_REF:0000043 GO_REF:0000107 RGD:4139903 RGD:5128582 NCBI chr 4:17,486,395...17,512,090
Ensembl chr 4:17,460,261...17,512,206
JBrowse link
G SPR sepiapterin reductase involved_in IBA
TAS
IEA
ISO
(PMID:21873635)
(PMID:1883349)
GO_Central
GO_Central
UniProt
InterPro
RGD
UniProt
PMID:1883349 PMID:2179471 PMID:21873635 GO_REF:0000002 RGD:1600056 NCBI chr 2:72,887,408...72,892,158
Ensembl chr 2:72,887,382...72,892,158
JBrowse link
tetrahydrobiopterin metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PRKG2 protein kinase cGMP-dependent 2 involved_in TAS Reactome
Reactome
Reactome:R-HSA-1474151 NCBI chr 4:81,087,370...81,217,836
Ensembl chr 4:81,087,370...81,215,222
JBrowse link
G SPR sepiapterin reductase acts_upstream_of_or_within ISO (MGI:3722569|PMID:16532389) MGI PMID:16532389 MGI:3722569 NCBI chr 2:72,887,408...72,892,158
Ensembl chr 2:72,887,382...72,892,158
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19770
    metabolic process 13198
      small molecule metabolic process 2055
        alcohol metabolic process 413
          polyol metabolic process 139
            1,5-anhydro-D-fructose metabolic process + 0
            2-deoxystreptamine metabolic process + 0
            alditol metabolic process + 26
            butirosin metabolic process + 0
            diol metabolic process + 33
            gentamycin metabolic process + 1
            inositol metabolic process + 11
            inositol phosphate metabolic process + 70
            kanamycin metabolic process + 0
            neomycin metabolic process + 0
            paromomycin metabolic process + 0
            phytosphingosine metabolic process + 1
            polyol biosynthetic process + 71
            polyol catabolic process + 29
            streptomycin metabolic process + 0
            tobramycin metabolic process + 0
            triethanolamine metabolic process + 0
Path 2
Term Annotations click to browse term
  biological_process 19770
    metabolic process 13198
      organic substance metabolic process 12723
        organic hydroxy compound metabolic process 627
          alcohol metabolic process 413
            polyol metabolic process 139
              1,5-anhydro-D-fructose metabolic process + 0
              2-deoxystreptamine metabolic process + 0
              alditol metabolic process + 26
              butirosin metabolic process + 0
              diol metabolic process + 33
              gentamycin metabolic process + 1
              inositol metabolic process + 11
              inositol phosphate metabolic process + 70
              kanamycin metabolic process + 0
              neomycin metabolic process + 0
              paromomycin metabolic process + 0
              phytosphingosine metabolic process + 1
              polyol biosynthetic process + 71
              polyol catabolic process + 29
              streptomycin metabolic process + 0
              tobramycin metabolic process + 0
              triethanolamine metabolic process + 0
paths to the root