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ONTOLOGY REPORT - ANNOTATIONS


Term:polyol metabolic process
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Accession:GO:0019751 term browser browse the term
Definition:The chemical reactions and pathways involving a polyol, any alcohol containing three or more hydroxyl groups attached to saturated carbon atoms.
Synonyms:exact_synonym: polyhydric alcohol metabolic process;   polyol metabolism


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calcitriol biosynthetic process from calciol term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC102004889 sterol 26-hydroxylase, mitochondrial involved_in ISO (PMID:15465040) UniProt PMID:15465040 NCBI chrNW_004955453:14,601,495...14,647,383
Ensembl chrNW_004955453:14,601,444...14,647,366
JBrowse link
G LOC102011841 25-hydroxyvitamin D-1 alpha hydroxylase, mitochondrial involved_in ISO (PMID:15795327), (PMID:16549446), (PMID:17023519), (PMID:22862690), (PMID:9415400)
(MGI:3590419|PMID:15972816)
BHF-UCL
UniProt
PMID:9415400 PMID:15795327 PMID:15972816 PMID:16549446 PMID:17023519 More... MGI:3590419 NCBI chrNW_004955458:5,472,404...5,477,001
Ensembl chrNW_004955458:5,472,404...5,477,001
JBrowse link
G LOC102024786 vitamin D 25-hydroxylase involved_in ISO (PMID:15465040), (PMID:18511070) UniProt PMID:15465040 PMID:18511070 NCBI chrNW_004955414:29,929,130...29,948,151
Ensembl chrNW_004955414:29,928,644...29,948,484
JBrowse link
diol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ephx1 epoxide hydrolase 1 ISO RGD PMID:2507189 RGD:11252156 NCBI chrNW_004955520:116,363...142,983
Ensembl chrNW_004955520:116,363...128,665
JBrowse link
diol metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lrp2 LDL receptor related protein 2 acts_upstream_of_or_within ISO (MGI:1331347|PMID:10052453) MGI PMID:10052453 MGI:1331347 NCBI chrNW_004955449:5,155,109...5,314,886
Ensembl chrNW_004955449:5,160,946...5,314,948
JBrowse link
diphosphoinositol polyphosphate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nudt3 nudix hydrolase 3 involved_in ISO (PMID:10585413) UniProt PMID:10585413 NCBI chrNW_004955437:2,497,720...2,584,280
Ensembl chrNW_004955437:2,504,429...2,584,280
JBrowse link
galactitol metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Galk1 galactokinase 1 acts_upstream_of_or_within ISO (MGI:1861531|PMID:10915771) MGI PMID:10915771 MGI:1861531 NCBI chrNW_004955506:6,489,799...6,493,354
Ensembl chrNW_004955506:6,489,800...6,493,354
JBrowse link
gentamycin metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc34a1 solute carrier family 34 member 1 ISO RGD PMID:11231357 RGD:7243145 NCBI chrNW_004955408:29,626,775...29,640,811
Ensembl chrNW_004955408:29,626,775...29,640,875
JBrowse link
glycerol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Got1 glutamic-oxaloacetic transaminase 1 involved_in
acts_upstream_of_or_within
ISO PMID:17545671
(MGI:3722000|PMID:17545671)
UniProt
MGI
PMID:17545671 MGI:3722000 RGD:8553472 NCBI chrNW_004955507:5,346,937...5,370,072
Ensembl chrNW_004955507:5,346,838...5,370,072
JBrowse link
G Lep leptin ISO RGD PMID:21068181 RGD:5128556 NCBI chrNW_004955479:9,266,604...9,276,568
Ensembl chrNW_004955479:9,274,516...9,279,472
JBrowse link
G Pgp phosphoglycolate phosphatase involved_in ISO (PMID:26755581)
(MGI:5707518|PMID:26755581)
UniProt PMID:26755581 MGI:5707518 RGD:10679995 NCBI chrNW_004955442:15,051,149...15,053,123
Ensembl chrNW_004955442:15,051,183...15,052,289
JBrowse link
glycerol biosynthetic process from pyruvate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pck1 phosphoenolpyruvate carboxykinase 1 involved_in
acts_upstream_of_or_within
ISO PMID:4186849
(MGI:2157262|PMID:11792850)
BHF-UCL
MGI
PMID:4186849 PMID:11792850 MGI:2157262 RGD:8553288 NCBI chrNW_004955445:1,909,012...1,914,032
Ensembl chrNW_004955445:1,908,946...1,915,002
JBrowse link
glycerol metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Angptl3 angiopoietin like 3 involved_in ISO (PMID:12565906) BHF-UCL PMID:12565906 NCBI chrNW_004955423:27,113,378...27,121,339
Ensembl chrNW_004955423:27,109,962...27,121,276
JBrowse link
G Coq2 coenzyme Q2, polyprenyltransferase involved_in ISO (PMID:15153069) UniProt PMID:15153069 NCBI chrNW_004955474:6,403,409...6,422,135 JBrowse link
G Coq3 coenzyme Q3, methyltransferase involved_in ISO (PMID:10777520) UniProt PMID:10777520 NCBI chrNW_004955411:25,243,684...25,268,225 JBrowse link
G Dysf dysferlin acts_upstream_of_or_within ISO (MGI:5548046|PMID:24177035) MGI PMID:24177035 MGI:5548046 NCBI chrNW_004955424:13,756,130...13,970,437
Ensembl chrNW_004955424:13,756,130...13,970,436
JBrowse link
G Gk glycerol kinase involved_in
acts_upstream_of_or_within
ISO (PMID:8499898)
(MGI:1097749|PMID:9302256), (MGI:3587535|PMID:16105550), (MGI:5051890|PMID:21536471)
BHF-UCL
MGI
PMID:8499898 PMID:9302256 PMID:16105550 PMID:21536471 MGI:1097749 MGI:3587535 MGI:5051890 NCBI chrNW_004955531:106,761...183,347 JBrowse link
G Myof myoferlin acts_upstream_of_or_within ISO (MGI:5548046|PMID:24177035) MGI PMID:24177035 MGI:5548046 NCBI chrNW_004955425:24,037...175,211
Ensembl chrNW_004955425:24,227...174,680
JBrowse link
inositol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Isyna1 inositol-3-phosphate synthase 1 involved_in ISO (PMID:23902760)
PMID:19188364
PMID:23504145
PMID:885873
PMID:6773943
UniProt PMID:885873 PMID:6773943 PMID:19188364 PMID:23504145 PMID:23902760 RGD:153298936 RGD:153298945 RGD:153298950 RGD:153298956 NCBI chrNW_004955524:3,099,017...3,100,454
Ensembl chrNW_004955524:3,098,995...3,100,454
JBrowse link
inositol catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Miox myo-inositol oxygenase involved_in ISO (PMID:11716759)
(PMID:18364358)
UniProt PMID:11716759 PMID:18364358 NCBI chrNW_004955413:33,476,097...33,478,539
Ensembl chrNW_004955413:33,476,033...33,478,539
JBrowse link
inositol metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Itpka inositol-trisphosphate 3-kinase A acts_upstream_of_or_within ISO (MGI:1314771|PMID:10454357) MGI PMID:10454357 MGI:1314771 NCBI chrNW_004955416:8,300,059...8,310,225
Ensembl chrNW_004955416:8,299,318...8,309,865
JBrowse link
G Mecp2 methyl-CpG binding protein 2 acts_upstream_of_or_within ISO (MGI:3769075|PMID:17237885) MGI PMID:17237885 MGI:3769075 NCBI chrNW_004955580:674,014...737,586
Ensembl chrNW_004955580:679,109...735,288
JBrowse link
G Ppip5k1 diphosphoinositol pentakisphosphate kinase 1 involved_in ISO (PMID:17412958) UniProt PMID:17412958 NCBI chrNW_004955416:10,074,239...10,113,268
Ensembl chrNW_004955416:10,074,239...10,109,523
JBrowse link
G Slc5a3 solute carrier family 5 member 3 acts_upstream_of_or_within ISO (MGI:3654617|PMID:16644257), (MGI:3812279|PMID:18675571) MGI PMID:16644257 PMID:18675571 MGI:3654617 MGI:3812279 NCBI chrNW_004955407:33,460,238...33,511,889
Ensembl chrNW_004955407:33,494,816...33,511,968
JBrowse link
inositol phosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgf2 fibroblast growth factor 2 involved_in ISO (PMID:20011604) DFLAT PMID:20011604 NCBI chrNW_004955428:17,840,554...17,894,779
Ensembl chrNW_004955428:17,840,628...17,894,773
JBrowse link
G Ip6k3 inositol hexakisphosphate kinase 3 acts_upstream_of_or_within ISO (PMID:11502751) MGI PMID:11502751 NCBI chrNW_004955437:2,128,337...2,150,714
Ensembl chrNW_004955437:2,125,222...2,149,242
JBrowse link
G Ipmk inositol polyphosphate multikinase acts_upstream_of_or_within ISO (MGI:3583505|PMID:15939867) MGI PMID:15939867 MGI:3583505 NCBI chrNW_004955425:11,949,849...12,000,610
Ensembl chrNW_004955425:11,945,858...11,985,023
JBrowse link
inositol phosphate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ntsr1 neurotensin receptor 1 ISO RGD PMID:15707678 RGD:9743914 NCBI chrNW_004955528:1,348,616...1,394,798
Ensembl chrNW_004955528:1,348,555...1,394,868
JBrowse link
inositol phosphate dephosphorylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Impa1 inositol monophosphatase 1 involved_in
acts_upstream_of_or_within
ISO PMID:9462881
(PMID:17068342)
(PMID:9462881)
UniProt
MGI
PMID:9462881 PMID:17068342 RGD:2302240 NCBI chrNW_004955417:14,114...40,128
Ensembl chrNW_004955417:12,504...40,902
JBrowse link
G Impa2 inositol monophosphatase 2 acts_upstream_of_or_within ISO (PMID:17068342) MGI PMID:17068342 NCBI chrNW_004955402:1,119,376...1,143,589
Ensembl chrNW_004955402:1,121,838...1,143,507
JBrowse link
G Inpp4b inositol polyphosphate-4-phosphatase type II B acts_upstream_of_or_within ISO PMID:9295334 MGI PMID:9295334 RGD:633135 NCBI chrNW_004955471:938,005...1,291,695
Ensembl chrNW_004955471:938,005...1,291,695
JBrowse link
G Inpp5a inositol polyphosphate-5-phosphatase A acts_upstream_of_or_within ISO (PMID:8006039) MGI PMID:8006039 NCBI chrNW_004955477:10,148,032...10,384,361
Ensembl chrNW_004955477:10,148,032...10,384,355
JBrowse link
G Inpp5e inositol polyphosphate-5-phosphatase E acts_upstream_of_or_within ISO (MGI:1861829|PMID:10806194) MGI PMID:10806194 MGI:1861829 NCBI chrNW_004955513:4,304,483...4,313,087
Ensembl chrNW_004955513:4,304,483...4,313,087
JBrowse link
G Inpp5k inositol polyphosphate-5-phosphatase K acts_upstream_of_or_within ISO (PMID:12536145) MGI PMID:12536145 NCBI chrNW_004955481:1,651,422...1,674,402
Ensembl chrNW_004955481:1,651,902...1,673,893
JBrowse link
G Mtmr2 myotubularin related protein 2 acts_upstream_of_or_within ISO (MGI:3619505|PMID:16399794) MGI PMID:16399794 MGI:3619505 NCBI chrNW_004955412:693,743...764,377
Ensembl chrNW_004955412:693,743...750,154
JBrowse link
G Mtmr7 myotubularin related protein 7 acts_upstream_of_or_within ISO (MGI:2673068|PMID:12890864) MGI PMID:12890864 MGI:2673068 NCBI chrNW_004955552:2,298,597...2,412,579
Ensembl chrNW_004955552:2,298,597...2,411,733
JBrowse link
G Pten phosphatase and tensin homolog involved_in ISO (PMID:9593664) UniProt
RGD
PMID:9593664 PMID:18056380 RGD:2292524 NCBI chrNW_004955425:5,007,811...5,091,829
Ensembl chrNW_004955425:5,014,147...5,091,829
JBrowse link
G Synj1 synaptojanin 1 acts_upstream_of_or_within ISO (MGI:1346710|PMID:10535736) MGI PMID:10535736 MGI:1346710 NCBI chrNW_004955407:32,094,076...32,175,676
Ensembl chrNW_004955407:32,093,479...32,175,795
JBrowse link
G Synj2 synaptojanin 2 ISO RGD PMID:9388224 RGD:69390 NCBI chrNW_004955439:4,305,630...4,400,775
Ensembl chrNW_004955439:4,290,238...4,400,775
JBrowse link
inositol phosphate metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Galr2 galanin receptor 2 ISO RGD PMID:9427506 RGD:69840 NCBI chrNW_004955506:6,172,366...6,178,061
Ensembl chrNW_004955506:6,172,366...6,176,084
JBrowse link
G Grk3 G protein-coupled receptor kinase 3 ISO RGD PMID:17573483 RGD:5685371 NCBI chrNW_004955442:19,640,145...19,785,803
Ensembl chrNW_004955442:19,640,145...19,785,803
JBrowse link
G Htr2b 5-hydroxytryptamine receptor 2B ISO RGD PMID:1331748 RGD:9727450 NCBI chrNW_004955453:4,352,278...4,367,807
Ensembl chrNW_004955453:4,351,668...4,367,807
JBrowse link
G Ip6k2 inositol hexakisphosphate kinase 2 involved_in ISO (PMID:30624931) UniProt PMID:30624931 NCBI chrNW_004955532:766,577...794,461
Ensembl chrNW_004955532:766,577...794,409
JBrowse link
inositol phosphorylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ippk inositol-pentakisphosphate 2-kinase involved_in ISO (PMID:12084730) BHF-UCL PMID:12084730 NCBI chrNW_004955515:5,170,164...5,219,130
Ensembl chrNW_004955515:5,170,164...5,219,130
JBrowse link
inositol trisphosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Plcg1 phospholipase C gamma 1 ISO RGD PMID:16973916 RGD:2299886 NCBI chrNW_004955445:15,787,496...15,823,859
Ensembl chrNW_004955445:15,787,496...15,823,859
JBrowse link
G Plcg2 phospholipase C gamma 2 acts_upstream_of_or_within ISO (MGI:85738|PMID:9013981) MGI PMID:9013981 MGI:85738 NCBI chrNW_004955522:4,352,890...4,480,735
Ensembl chrNW_004955522:4,358,233...4,468,986
JBrowse link
G Pou1f1 POU class 1 homeobox 1 acts_upstream_of ISO (MGI:2135699|PMID:11371619) MGI PMID:11371619 MGI:2135699 NCBI chrNW_004955407:5,996,016...6,011,483
Ensembl chrNW_004955407:5,996,016...6,011,483
JBrowse link
G Ptafr platelet activating factor receptor acts_upstream_of_or_within ISO (MGI:85738|PMID:9013981) MGI PMID:9013981 MGI:85738 NCBI chrNW_004955452:7,309,854...7,345,579
Ensembl chrNW_004955452:7,311,901...7,312,929
JBrowse link
G Scp2 sterol carrier protein 2 involved_in ISO (PMID:12641450) UniProt PMID:12641450 NCBI chrNW_004955464:6,097,241...6,224,287
Ensembl chrNW_004955464:6,094,758...6,224,287
JBrowse link
inositol trisphosphate metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Inppl1 inositol polyphosphate phosphatase like 1 ISO RGD PMID:12933696 RGD:1626126 NCBI chrNW_004955414:19,146,304...19,163,923
Ensembl chrNW_004955414:19,145,432...19,163,923
JBrowse link
G Ipmk inositol polyphosphate multikinase involved_in ISO (PMID:30624931) UniProt PMID:30624931 NCBI chrNW_004955425:11,949,849...12,000,610
Ensembl chrNW_004955425:11,945,858...11,985,023
JBrowse link
G Itpkb inositol-trisphosphate 3-kinase B involved_in ISO (PMID:1654894) UniProt PMID:1654894 NCBI chrNW_004955489:726,641...814,180
Ensembl chrNW_004955489:725,759...814,180
JBrowse link
G Plcb1 phospholipase C beta 1 ISO RGD PMID:8387502 RGD:11535163 NCBI chrNW_004955415:18,210,608...18,915,099
Ensembl chrNW_004955415:18,210,662...18,915,158
JBrowse link
G Plcb3 phospholipase C beta 3 ISO RGD PMID:8387502 RGD:11535163 NCBI chrNW_004955422:20,810,871...20,827,267
Ensembl chrNW_004955422:20,810,544...20,827,267
JBrowse link
G Plcg1 phospholipase C gamma 1 ISO RGD PMID:7812955 RGD:151356942 NCBI chrNW_004955445:15,787,496...15,823,859
Ensembl chrNW_004955445:15,787,496...15,823,859
JBrowse link
L-xylitol catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sord sorbitol dehydrogenase involved_in ISO (PMID:8487505) UniProt PMID:8487505 NCBI chrNW_004955409:8,305,819...8,333,733
Ensembl chrNW_004955409:8,303,602...8,333,869
JBrowse link
L-xylitol metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sord sorbitol dehydrogenase involved_in ISO (PMID:3365415) UniProt PMID:3365415 NCBI chrNW_004955409:8,305,819...8,333,733
Ensembl chrNW_004955409:8,303,602...8,333,869
JBrowse link
negative regulation of inositol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Isyna1 inositol-3-phosphate synthase 1 involved_in ISO PMID:19188364 UniProt PMID:19188364 RGD:153298950 NCBI chrNW_004955524:3,099,017...3,100,454
Ensembl chrNW_004955524:3,098,995...3,100,454
JBrowse link
negative regulation of inositol phosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Plek pleckstrin involved_in ISO (PMID:7559487), (PMID:7782310) BHF-UCL PMID:7559487 PMID:7782310 NCBI chrNW_004955424:16,494,052...16,524,790
Ensembl chrNW_004955424:16,493,960...16,524,998
JBrowse link
G Prkg1 protein kinase cGMP-dependent 1 ISO RGD PMID:7535379 RGD:7777104 NCBI chrNW_004955425:6,176,335...7,335,867
Ensembl chrNW_004955425:6,176,432...7,331,446
JBrowse link
phytosphingosine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acer3 alkaline ceramidase 3 involved_in ISO (PMID:11356846), (PMID:20068046) UniProt PMID:11356846 PMID:20068046 NCBI chrNW_004955414:14,741,027...14,846,931
Ensembl chrNW_004955414:14,746,529...14,848,151
JBrowse link
positive regulation of inositol phosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adcyap1r1 ADCYAP receptor type I ISO RGD PMID:8943280 RGD:2315982 NCBI chrNW_004955410:32,176,683...32,229,187
Ensembl chrNW_004955410:32,176,536...32,229,431
JBrowse link
G Avpr1b arginine vasopressin receptor 1B involved_in ISO (PMID:9322919) ARUK-UCL PMID:9322919 NCBI chrNW_004955406:41,706,088...41,716,173
Ensembl chrNW_004955406:41,705,305...41,716,173
JBrowse link
G Cd244 CD244 molecule involved_in ISO (PMID:8376943) UniProt PMID:8376943 NCBI chrNW_004955468:12,532,937...12,559,859
Ensembl chrNW_004955468:12,534,064...12,559,434
JBrowse link
G Mas1 MAS1 proto-oncogene, G protein-coupled receptor ISO RGD PMID:1332507 RGD:2316794 NCBI chrNW_004955439:20,956,862...20,957,839
Ensembl chrNW_004955439:20,956,862...20,957,839
JBrowse link
G Ntsr1 neurotensin receptor 1 ISO RGD PMID:11861328 RGD:9743897 NCBI chrNW_004955528:1,348,616...1,394,798
Ensembl chrNW_004955528:1,348,555...1,394,868
JBrowse link
G Ptafr platelet activating factor receptor ISO RGD PMID:8798508 RGD:9999203 NCBI chrNW_004955452:7,309,854...7,345,579
Ensembl chrNW_004955452:7,311,901...7,312,929
JBrowse link
G Pth parathyroid hormone involved_in ISO (PMID:11604398) CAFA PMID:11604398 NCBI chrNW_004955414:28,828,389...28,831,417
Ensembl chrNW_004955414:28,825,651...28,831,117
JBrowse link
G Pth1r parathyroid hormone 1 receptor involved_in ISO PMID:19608645 BHF-UCL PMID:19608645 RGD:8553376 NCBI chrNW_004955420:25,274,269...25,291,984
Ensembl chrNW_004955420:25,273,431...25,296,471
JBrowse link
G Snca synuclein alpha involved_in ISO (PMID:15641770) UniProt PMID:15641770 NCBI chrNW_004955405:854,011...962,741
Ensembl chrNW_004955405:853,946...965,403
JBrowse link
positive regulation of inositol trisphosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gper1 G protein-coupled estrogen receptor 1 involved_in ISO (PMID:15705806) UniProt PMID:15705806 NCBI chrNW_004955460:8,790,798...8,794,902
Ensembl chrNW_004955460:8,790,798...8,794,902
JBrowse link
G Lhcgr luteinizing hormone/choriogonadotropin receptor involved_in ISO (MGI:5318037|PMID:10493819) BHF-UCL PMID:10493819 MGI:5318037 NCBI chrNW_004955441:15,205,883...15,263,617
Ensembl chrNW_004955441:15,207,252...15,242,914
JBrowse link
G Myh9 myosin heavy chain 9 ISO RGD PMID:20068007 RGD:6902910 NCBI chrNW_004955413:22,881,759...22,972,182
Ensembl chrNW_004955413:22,881,045...22,972,450
JBrowse link
G P2ry1 purinergic receptor P2Y1 involved_in ISO PMID:11390975 BHF-UCL PMID:11390975 RGD:8553380 NCBI chrNW_004955448:4,366,706...4,372,626
Ensembl chrNW_004955448:4,366,706...4,372,626
JBrowse link
G P2ry6 pyrimidinergic receptor P2Y6 involved_in ISO (PMID:8670200) ARUK-UCL PMID:8670200 NCBI chrNW_004955414:18,177,406...18,215,428
Ensembl chrNW_004955414:18,177,406...18,215,428
JBrowse link
G Plcd1 phospholipase C delta 1 ISO RGD PMID:16709602 RGD:2300424 NCBI chrNW_004955421:4,856,366...4,880,309
Ensembl chrNW_004955421:4,856,366...4,880,309
JBrowse link
G Pou1f1 POU class 1 homeobox 1 acts_upstream_of_or_within ISO (MGI:2135699|PMID:11371619) MGI PMID:11371619 MGI:2135699 NCBI chrNW_004955407:5,996,016...6,011,483
Ensembl chrNW_004955407:5,996,016...6,011,483
JBrowse link
regulation of inositol trisphosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ptk2b protein tyrosine kinase 2 beta involved_in ISO (MGI:3583523|PMID:12960403) UniProt PMID:12960403 MGI:3583523 NCBI chrNW_004955403:49,856,056...49,970,800
Ensembl chrNW_004955403:49,855,541...49,973,225
JBrowse link
sorbitol catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sord sorbitol dehydrogenase involved_in ISO (PMID:32367058)
(PMID:12962626), (PMID:3365415), (PMID:6870831), (PMID:8487505)
FlyBase
UniProt
PMID:3365415 PMID:6870831 PMID:8487505 PMID:12962626 PMID:32367058 NCBI chrNW_004955409:8,305,819...8,333,733
Ensembl chrNW_004955409:8,303,602...8,333,869
JBrowse link
sorbitol metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sord sorbitol dehydrogenase acts_upstream_of_or_within ISO (MGI:55679|PMID:6626150), (MGI:60299|PMID:722274) MGI PMID:722274 PMID:6626150 MGI:55679 MGI:60299 NCBI chrNW_004955409:8,305,819...8,333,733
Ensembl chrNW_004955409:8,303,602...8,333,869
JBrowse link
sphinganine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sptlc1 serine palmitoyltransferase long chain base subunit 1 acts_upstream_of_or_within ISO (MGI:3846467|PMID:19416652) MGI PMID:19416652 MGI:3846467 NCBI chrNW_004955515:57,711...161,012
Ensembl chrNW_004955515:57,711...161,611
JBrowse link
G Sptlc2 serine palmitoyltransferase long chain base subunit 2 acts_upstream_of_or_within ISO (MGI:1098386|PMID:9363775) MGI PMID:9363775 MGI:1098386 NCBI chrNW_004955438:1,385,431...1,491,534
Ensembl chrNW_004955438:1,385,431...1,491,578
JBrowse link
sphinganine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Degs2 delta 4-desaturase, sphingolipid 2 acts_upstream_of_or_within ISO (MGI:3694278|PMID:16571104)
(MGI:3505861|PMID:11937514)
MGI PMID:11937514 PMID:16571104 MGI:3505861 MGI:3694278 NCBI chrNW_004955438:21,300,118...21,313,330
Ensembl chrNW_004955438:21,300,118...21,313,330
JBrowse link
sphingosine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca2 ATP binding cassette subfamily A member 2 acts_upstream_of_positive_effect ISO (PMID:26510981) ARUK-UCL PMID:26510981 NCBI chrNW_004955513:5,035,879...5,051,140
Ensembl chrNW_004955513:5,033,771...5,051,200
JBrowse link
G Acer1 alkaline ceramidase 1 involved_in ISO (PMID:20207939)
(MGI:5800647|PMID:27126290), (MGI:6107252|PMID:29056331)
(PMID:17713573), (PMID:20628055)
UniProt
BHF-UCL
PMID:17713573 PMID:20207939 PMID:20628055 PMID:27126290 PMID:29056331 MGI:5800647 MGI:6107252 NCBI chrNW_004955495:3,247,170...3,271,417
Ensembl chrNW_004955495:3,247,083...3,271,720
JBrowse link
G Acer2 alkaline ceramidase 2 involved_in ISO (PMID:20207939)
(MGI:6116621|PMID:29401619)
(PMID:16940153), (PMID:20089856), (PMID:20628055)
UniProt PMID:16940153 PMID:20089856 PMID:20207939 PMID:20628055 PMID:29401619 MGI:6116621 NCBI chrNW_004955434:21,786,857...21,810,648
Ensembl chrNW_004955434:21,786,856...21,810,648
JBrowse link
G Acer3 alkaline ceramidase 3 involved_in ISO (PMID:20068046)
(MGI:5749603|PMID:26474409)
(PMID:20207939), (PMID:26792856)
UniProt PMID:20068046 PMID:20207939 PMID:26474409 PMID:26792856 MGI:5749603 NCBI chrNW_004955414:14,741,027...14,846,931
Ensembl chrNW_004955414:14,746,529...14,848,151
JBrowse link
G Asah1 N-acylsphingosine amidohydrolase 1 involved_in ISO (PMID:10610716)
(MGI:1267186|PMID:9653654)
(PMID:12815059)
UniProt PMID:9653654 PMID:10610716 PMID:12815059 MGI:1267186 NCBI chrNW_004955552:1,623,263...1,660,285
Ensembl chrNW_004955552:1,623,738...1,659,086
JBrowse link
G Asah2 N-acylsphingosine amidohydrolase 2 involved_in ISO (PMID:30154232)
PMID:15123644
(MGI:6275120|PMID:10652340)
(MGI:3608219|PMID:16126722), (MGI:3640407|PMID:16380386)
PMID:15217782
PMID:10488143
UniProt PMID:10488143 PMID:10652340 PMID:15123644 PMID:15217782 PMID:16126722 More... MGI:3608219 MGI:3640407 MGI:6275120 RGD:13838793 RGD:13838794 RGD:13838800 NCBI chrNW_004955425:5,840,355...5,931,891
Ensembl chrNW_004955425:5,840,355...5,931,891
JBrowse link
G Gba1 glucosylceramidase beta 1 involved_in ISO (PMID:19279011) BHF-UCL PMID:19279011 NCBI chrNW_004955545:1,682,097...1,689,373
Ensembl chrNW_004955545:1,682,097...1,689,376
JBrowse link
G Sphk1 sphingosine kinase 1 involved_in ISO (PMID:23106337) UniProt PMID:23106337 NCBI chrNW_004955506:5,902,079...5,906,639
Ensembl chrNW_004955506:5,902,345...5,904,988
JBrowse link
G Sphk2 sphingosine kinase 2 involved_in ISO (PMID:23106337) UniProt PMID:23106337 NCBI chrNW_004955559:1,921,479...1,929,450
Ensembl chrNW_004955559:1,917,301...1,928,493
JBrowse link
G Sptlc1 serine palmitoyltransferase long chain base subunit 1 acts_upstream_of_or_within
involved_in
ISO (MGI:3814228|PMID:16216550)
(PMID:19416851), (PMID:33558761)
MGI
ComplexPortal
PMID:16216550 PMID:19416851 PMID:33558761 MGI:3814228 NCBI chrNW_004955515:57,711...161,012
Ensembl chrNW_004955515:57,711...161,611
JBrowse link
G Sptlc2 serine palmitoyltransferase long chain base subunit 2 acts_upstream_of_or_within
involved_in
ISO (MGI:3814228|PMID:16216550)
(PMID:19416851), (PMID:33558761)
MGI
ComplexPortal
PMID:16216550 PMID:19416851 PMID:33558761 MGI:3814228 NCBI chrNW_004955438:1,385,431...1,491,534
Ensembl chrNW_004955438:1,385,431...1,491,578
JBrowse link
G Sptlc3 serine palmitoyltransferase long chain base subunit 3 involved_in ISO (PMID:19416851) ComplexPortal PMID:19416851 NCBI chrNW_004955415:22,532,193...22,686,071
Ensembl chrNW_004955415:22,531,626...22,682,564
JBrowse link
G Sptssa serine palmitoyltransferase small subunit A involved_in ISO (PMID:19416851), (PMID:33558761) ComplexPortal PMID:19416851 PMID:33558761 NCBI chrNW_004955409:26,460,208...26,460,854 JBrowse link
G Sptssb serine palmitoyltransferase small subunit B involved_in ISO (PMID:19416851) ComplexPortal PMID:19416851 NCBI chrNW_004955448:11,756,766...11,791,418
Ensembl chrNW_004955448:11,756,766...11,790,368
JBrowse link
sphingosine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Asah2 N-acylsphingosine amidohydrolase 2 involved_in ISO (PMID:10781606), (PMID:15946935)
(PMID:16229686), (PMID:17475390), (PMID:26190575)
UniProt PMID:10781606 PMID:15946935 PMID:16229686 PMID:17475390 PMID:26190575 NCBI chrNW_004955425:5,840,355...5,931,891
Ensembl chrNW_004955425:5,840,355...5,931,891
JBrowse link
G Naaa N-acylethanolamine acid amidase involved_in ISO (PMID:15655246) UniProt PMID:15655246 NCBI chrNW_004955433:630,627...674,675
Ensembl chrNW_004955433:630,483...674,675
JBrowse link
G Plpp1 phospholipid phosphatase 1 involved_in ISO (PMID:9705349)
(MGI:6383560|PMID:10359651)
PMID:8663293
UniProt PMID:8663293 PMID:9705349 PMID:10359651 MGI:6383560 RGD:15090855 RGD:15090857 NCBI chrNW_004955446:12,201,678...12,279,992
Ensembl chrNW_004955446:12,229,395...12,279,737
JBrowse link
G Plpp2 phospholipid phosphatase 2 involved_in ISO (PMID:9705349) UniProt PMID:9705349 NCBI chrNW_004955495:7,307,079...7,310,898
Ensembl chrNW_004955495:7,307,079...7,310,955
JBrowse link
G Plpp3 phospholipid phosphatase 3 involved_in ISO (PMID:9305923), (PMID:9705349) UniProt PMID:9305923 PMID:9705349 NCBI chrNW_004955464:3,122,420...3,197,359
Ensembl chrNW_004955464:3,081,334...3,197,413
JBrowse link
G Sgpp1 sphingosine-1-phosphate phosphatase 1 acts_upstream_of_or_within ISO (MGI:2176350|PMID:11756451) MGI PMID:11756451 MGI:2176350 NCBI chrNW_004955466:6,075,507...6,103,739 JBrowse link
G Sgpp2 sphingosine-1-phosphate phosphatase 2 involved_in ISO (PMID:12411432) UniProt PMID:12411432 NCBI chrNW_004955453:11,244,077...11,361,990
Ensembl chrNW_004955453:11,242,647...11,359,569
JBrowse link
G Sphk1 sphingosine kinase 1 involved_in ISO (PMID:20577214) UniProt PMID:20577214 NCBI chrNW_004955506:5,902,079...5,906,639
Ensembl chrNW_004955506:5,902,345...5,904,988
JBrowse link
G Sphk2 sphingosine kinase 2 acts_upstream_of_or_within
involved_in
ISO (MGI:3608224|PMID:16093248)
(MGI:3703830|PMID:17346996)
MGI
UniProt
PMID:16093248 PMID:17346996 MGI:3608224 MGI:3703830 NCBI chrNW_004955559:1,921,479...1,929,450
Ensembl chrNW_004955559:1,917,301...1,928,493
JBrowse link
tetrahydrobiopterin biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dhfr dihydrofolate reductase involved_in ISO (PMID:23707606)
(MGI:5645206|PMID:19666465)
BHF-UCL PMID:19666465 PMID:23707606 MGI:5645206 NCBI chrNW_004955418:29,274,170...29,283,028 JBrowse link
G Gch1 GTP cyclohydrolase 1 involved_in ISO (PMID:7678411), (PMID:9445252)
(PMID:17101830), (PMID:19666465)
UniProt
BHF-UCL
PMID:7678411 PMID:9445252 PMID:17101830 PMID:19666465 NCBI chrNW_004955409:8,624,225...8,670,436
Ensembl chrNW_004955409:8,624,468...8,668,614
JBrowse link
G Pts 6-pyruvoyltetrahydropterin synthase acts_upstream_of_or_within ISO (MGI:1328867|PMID:9894812) MGI PMID:9894812 MGI:1328867 NCBI chrNW_004955412:13,880,937...13,888,562
Ensembl chrNW_004955412:13,880,937...13,888,562
JBrowse link
G Qdpr quinoid dihydropteridine reductase involved_in ISO PMID:1898002 RGD
UniProt
PMID:660556 PMID:1898002 PMID:9235988 RGD:4139903 RGD:5128582 RGD:8553309 NCBI chrNW_004955480:6,646,088...6,666,866
Ensembl chrNW_004955480:6,646,088...6,669,526
JBrowse link
G Spr sepiapterin reductase ISO RGD PMID:2179471 RGD:1600056 NCBI chrNW_004955424:12,711,064...12,716,000
Ensembl chrNW_004955424:12,711,064...12,716,000
JBrowse link
tetrahydrobiopterin metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Spr sepiapterin reductase acts_upstream_of_or_within ISO (MGI:3722569|PMID:16532389) MGI PMID:16532389 MGI:3722569 NCBI chrNW_004955424:12,711,064...12,716,000
Ensembl chrNW_004955424:12,711,064...12,716,000
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 12275
    metabolic process 7823
      small molecule metabolic process 1286
        alcohol metabolic process 254
          polyol metabolic process 96
            1,5-anhydro-D-fructose metabolic process + 0
            2-deoxystreptamine metabolic process + 0
            alditol metabolic process + 12
            butirosin metabolic process + 0
            diol metabolic process + 28
            gentamycin metabolic process + 1
            inositol metabolic process + 7
            inositol phosphate metabolic process + 45
            kanamycin metabolic process + 0
            neomycin metabolic process + 0
            paromomycin metabolic process + 0
            phytosphingosine metabolic process + 1
            polyol biosynthetic process + 53
            polyol catabolic process + 15
            streptomycin metabolic process + 0
            tobramycin metabolic process + 0
            triethanolamine metabolic process + 0
Path 2
Term Annotations click to browse term
  biological_process 12275
    metabolic process 7823
      organic substance metabolic process 7531
        organic hydroxy compound metabolic process 416
          alcohol metabolic process 254
            polyol metabolic process 96
              1,5-anhydro-D-fructose metabolic process + 0
              2-deoxystreptamine metabolic process + 0
              alditol metabolic process + 12
              butirosin metabolic process + 0
              diol metabolic process + 28
              gentamycin metabolic process + 1
              inositol metabolic process + 7
              inositol phosphate metabolic process + 45
              kanamycin metabolic process + 0
              neomycin metabolic process + 0
              paromomycin metabolic process + 0
              phytosphingosine metabolic process + 1
              polyol biosynthetic process + 53
              polyol catabolic process + 15
              streptomycin metabolic process + 0
              tobramycin metabolic process + 0
              triethanolamine metabolic process + 0
paths to the root