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ONTOLOGY REPORT - ANNOTATIONS


Term:secondary metabolic process
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Accession:GO:0019748 term browser browse the term
Definition:The chemical reactions and pathways resulting in many of the chemical changes of compounds that are not necessarily required for growth and maintenance of cells, and are often unique to a taxon. In multicellular organisms secondary metabolism is generally carried out in specific cell types, and may be useful for the organism as a whole. In unicellular organisms, secondary metabolism is often used for the production of antibiotics or for the utilization and acquisition of unusual nutrients.
Synonyms:exact_synonym: secondary metabolism;   secondary metabolite metabolic process;   secondary metabolite metabolism
 xref: Wikipedia:Secondary_metabolism


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secondary metabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acmsd aminocarboxymuconate semialdehyde decarboxylase IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:44,424,689...44,468,734
Ensembl chr13:44,424,689...44,468,734
JBrowse link
aflatoxin catabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akr7a3 aldo-keto reductase family 7 member A3 IMP RGD PMID:12727802 RGD:1304380 NCBI chr 5:157,801,120...157,813,756
Ensembl chr 5:157,801,163...157,813,756
JBrowse link
G Gsta3 glutathione S-transferase alpha 3 ISO MGI:MGI:4430389 (MGI:MGI:4429761|PMID:19850059) RGD PMID:19850059 MGI:MGI:4429761 NCBI chr 9:27,357,490...27,417,023
Ensembl chr 9:27,402,381...27,417,023
JBrowse link
G Nfe2l2 nuclear factor, erythroid 2-like 2 IMP RGD PMID:27071940 RGD:12910550 NCBI chr 3:62,497,568...62,525,146
Ensembl chr 3:62,497,571...62,524,996
JBrowse link
aflatoxin metabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akr7a3 aldo-keto reductase family 7 member A3 IDA RGD PMID:8234296 RGD:632009 NCBI chr 5:157,801,120...157,813,756
Ensembl chr 5:157,801,163...157,813,756
JBrowse link
G Cyp2w1 cytochrome P450, family 2, subfamily w, polypeptide 1 ISO (PMID:16551781) RGD PMID:16551781 NCBI chr12:17,382,749...17,387,909
Ensembl chr12:17,383,159...17,387,879
JBrowse link
benzylpenicillin metabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcc2 ATP binding cassette subfamily C member 2 IMP RGD PMID:19255943 RGD:11081014 NCBI chr 1:263,554,426...263,612,556
Ensembl chr 1:263,554,453...263,613,252
JBrowse link
coumarin catabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pon3 paraoxonase 3 IDA RGD PMID:12946270 RGD:1303961 NCBI chr 4:30,311,981...30,338,679
Ensembl chr 4:30,311,982...30,338,679
JBrowse link
G Ugt1a7c UDP glucuronosyltransferase 1 family, polypeptide A7C IDA RGD PMID:15502008 RGD:2317077 NCBI chr 9:95,233,957...95,302,822
Ensembl chr 9:95,161,157...95,302,822
JBrowse link
G Ugt1a8 UDP glucuronosyltransferase family 1 member A8 IDA RGD PMID:15502008 RGD:2317077 NCBI chr 9:95,221,474...95,302,822
Ensembl chr 9:95,161,157...95,302,822
JBrowse link
coumarin metabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cyp1a1 cytochrome P450, family 1, subfamily a, polypeptide 1 IDA Coumarin derivative metabolism RGD PMID:11780761 RGD:2306676 NCBI chr 8:62,472,087...62,478,122
Ensembl chr 8:62,472,095...62,478,147
JBrowse link
G Cyp2a1 cytochrome P450, family 2, subfamily a, polypeptide 1 IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:12162851, PMID:21873635 RGD:727640, RGD:13792537 NCBI chr 1:83,711,223...83,725,222
Ensembl chr 1:83,653,234...83,766,484
JBrowse link
G Cyp2a2 cytochrome P450, family 2, subfamily a, polypeptide 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:83,744,229...83,766,490
Ensembl chr 1:83,653,234...83,766,484
JBrowse link
G Cyp2a3 cytochrome P450, family 2, subfamily a, polypeptide 3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:83,653,248...83,662,118
Ensembl chr 1:83,653,234...83,766,484
JBrowse link
G Cyp2d4 cytochrome P450, family 2, subfamily d, polypeptide 4 ISO (PMID:19438707) RGD PMID:19438707 NCBI chr 7:123,599,264...123,608,436
Ensembl chr 7:123,599,266...123,608,436
JBrowse link
daunorubicin metabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akr1a1 aldo-keto reductase family 1 member A1 ISO (PMID:18276838) RGD PMID:18276838 NCBI chr 5:135,482,068...135,498,693
Ensembl chr 5:135,482,068...135,498,822
JBrowse link
G Akr1b1 aldo-keto reductase family 1 member B ISO (PMID:20837989) RGD PMID:20837989 NCBI chr 4:61,706,866...61,720,959
Ensembl chr 4:61,706,864...61,720,956
JBrowse link
G Akr1b10 aldo-keto reductase family 1 member B10 ISO (PMID:20837989) RGD PMID:20837989 NCBI chr 4:61,813,265...61,830,371
Ensembl chr 4:61,771,970...61,828,657
JBrowse link
G Akr1c1 aldo-keto reductase family 1, member C1 ISO
IBA
(PMID:20837989)
PMID:21873635
RGD PMID:20837989, PMID:21873635 RGD:13792537 NCBI chr17:69,441,253...69,460,334
Ensembl chr17:69,441,223...69,460,321
JBrowse link
G Akr1c14 aldo-keto reductase family 1, member C14 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:69,806,095...69,827,125
Ensembl chr17:69,806,065...69,827,112
JBrowse link
G Akr1c2 aldo-keto reductase family 1, member C2 ISO
IBA
(PMID:20837989)
PMID:21873635
RGD PMID:20837989, PMID:21873635 RGD:13792537 NCBI chr17:69,388,337...69,435,160
Ensembl chr17:69,388,335...69,404,341
JBrowse link
G Akr1c3 aldo-keto reductase family 1, member C3 ISO
IBA
(PMID:20837989)
PMID:21873635
RGD PMID:20837989, PMID:21873635 RGD:13792537 NCBI chr17:69,761,126...69,778,021
Ensembl chr17:69,761,118...69,778,021
JBrowse link
G Akr7a2 aldo-keto reductase family 7, member A2 ISO (PMID:20837989) RGD PMID:20837989 NCBI chr 5:157,759,448...157,768,473
Ensembl chr 5:157,759,416...157,768,471
JBrowse link
G Cbr4 carbonyl reductase 4 ISO (PMID:20837989) RGD PMID:20837989 NCBI chr16:31,944,328...31,972,553
Ensembl chr16:31,956,753...31,972,507
JBrowse link
G RGD1564865 similar to 20-alpha-hydroxysteroid dehydrogenase IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:69,468,427...69,497,132
Ensembl chr17:69,468,427...69,497,132
JBrowse link
doxorubicin metabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akr1a1 aldo-keto reductase family 1 member A1 ISO (PMID:18276838) RGD PMID:18276838 NCBI chr 5:135,482,068...135,498,693
Ensembl chr 5:135,482,068...135,498,822
JBrowse link
G Akr1b1 aldo-keto reductase family 1 member B ISO (PMID:20837989) RGD PMID:20837989 NCBI chr 4:61,706,866...61,720,959
Ensembl chr 4:61,706,864...61,720,956
JBrowse link
G Akr1b10 aldo-keto reductase family 1 member B10 ISO (PMID:20837989) RGD PMID:20837989 NCBI chr 4:61,813,265...61,830,371
Ensembl chr 4:61,771,970...61,828,657
JBrowse link
G Akr1c1 aldo-keto reductase family 1, member C1 ISO
IBA
(PMID:20837989)
PMID:21873635
RGD PMID:20837989, PMID:21873635 RGD:13792537 NCBI chr17:69,441,253...69,460,334
Ensembl chr17:69,441,223...69,460,321
JBrowse link
G Akr1c14 aldo-keto reductase family 1, member C14 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:69,806,095...69,827,125
Ensembl chr17:69,806,065...69,827,112
JBrowse link
G Akr1c2 aldo-keto reductase family 1, member C2 ISO
IBA
(PMID:20837989)
PMID:21873635
RGD PMID:20837989, PMID:21873635 RGD:13792537 NCBI chr17:69,388,337...69,435,160
Ensembl chr17:69,388,335...69,404,341
JBrowse link
G Akr1c3 aldo-keto reductase family 1, member C3 ISO
IBA
(PMID:20837989)
PMID:21873635
RGD PMID:20837989, PMID:21873635 RGD:13792537 NCBI chr17:69,761,126...69,778,021
Ensembl chr17:69,761,118...69,778,021
JBrowse link
G Akr7a2 aldo-keto reductase family 7, member A2 ISO (PMID:20837989) RGD PMID:20837989 NCBI chr 5:157,759,448...157,768,473
Ensembl chr 5:157,759,416...157,768,471
JBrowse link
G Cbr4 carbonyl reductase 4 ISO (PMID:20837989) RGD PMID:20837989 NCBI chr16:31,944,328...31,972,553
Ensembl chr16:31,956,753...31,972,507
JBrowse link
G RGD1564865 similar to 20-alpha-hydroxysteroid dehydrogenase IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:69,468,427...69,497,132
Ensembl chr17:69,468,427...69,497,132
JBrowse link
insecticide metabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cyp1a1 cytochrome P450, family 1, subfamily a, polypeptide 1 IDA Deltamethrin (pyrethroid) RGD PMID:16169030 RGD:2306660 NCBI chr 8:62,472,087...62,478,122
Ensembl chr 8:62,472,095...62,478,147
JBrowse link
G Hsd17b3 hydroxysteroid (17-beta) dehydrogenase 3 IEP methoxychlor RGD PMID:18401575 RGD:4890969 NCBI chr17:1,579,319...1,610,745
Ensembl chr17:1,579,319...1,610,745
JBrowse link
G Hsd3b1 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1 IEP methoxychlor RGD PMID:18401575 RGD:4890969
G Star steroidogenic acute regulatory protein IEP methoxychlor RGD PMID:18401575 RGD:4890969 NCBI chr16:71,036,204...71,040,847
Ensembl chr16:71,036,204...71,040,847
JBrowse link
melanin biosynthetic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Asip agouti signaling protein ISO MGI:MGI:1855937 (MGI:MGI:76308|PMID:7665913) RGD PMID:7665913 MGI:MGI:76308 NCBI chr 3:150,492,010...150,579,870
Ensembl chr 3:150,574,473...150,579,870
JBrowse link
G Cited1 Cbp/p300-interacting transactivator with Glu/Asp-rich carboxy-terminal domain 1 ISO
ISS
(MGI:MGI:4412464|PMID:11434569)
GO_REF:0000024
RGD
UniProt
PMID:11434569 GO_REF:0000024, MGI:MGI:4412464 NCBI chr  X:72,128,996...72,133,692
Ensembl chr  X:72,128,994...72,133,692
JBrowse link
G Dct dopachrome tautomerase ISO MGI:MGI:1856379 (MGI:MGI:76308|PMID:7665913) RGD PMID:7665913 MGI:MGI:76308 NCBI chr15:103,208,174...103,245,033
Ensembl chr15:103,208,258...103,244,494
JBrowse link
G Ddt D-dopachrome tautomerase IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr20:13,827,153...13,829,624
Ensembl chr20:13,827,132...13,831,588
JBrowse link
G Mc1r melanocortin 1 receptor ISO MGI:MGI:1856028 (MGI:MGI:76308|PMID:7665913) RGD PMID:7665913 MGI:MGI:76308 NCBI chr19:56,215,420...56,219,987 JBrowse link
G Myo5a myosin VA ISO
IEA
MGI:MGI:1856004 (MGI:MGI:76308|PMID:7665913)
GO_REF:0000107
RGD
Ensembl
PMID:7665913 GO_REF:0000107, MGI:MGI:76308 NCBI chr 8:82,038,966...82,156,507
Ensembl chr 8:82,037,977...82,156,617
JBrowse link
G Oca2 OCA2 melanosomal transmembrane protein ISO MGI:MGI:1856114 (MGI:MGI:1202196|PMID:9548375), (MGI:MGI:76308|PMID:7665913) RGD PMID:7665913, PMID:9548375 MGI:MGI:1202196, MGI:MGI:76308 NCBI chr 1:114,661,970...114,987,433
Ensembl chr 1:114,679,537...114,987,433
JBrowse link
G Pmel premelanosome protein ISO MGI:MGI:1857040 (MGI:MGI:76308|PMID:7665913) RGD PMID:7665913 MGI:MGI:76308 NCBI chr 7:3,133,347...3,143,827
Ensembl chr 7:3,133,506...3,143,911
JBrowse link
G Trpc1 transient receptor potential cation channel, subfamily C, member 1 ISO
IEA
(PMID:8126111)
GO_REF:0000107
RGD
Ensembl
PMID:8126111 GO_REF:0000107 NCBI chr 8:103,503,982...103,554,905
Ensembl chr 8:103,503,985...103,554,468
JBrowse link
G Tyr tyrosinase ISO
IBA
(PMID:8126111)
PMID:21873635
MGI:MGI:1855976|MGI:MGI:1855978 (MGI:MGI:1202196|PMID:9548375), (MGI:MGI:76308|PMID:7665913)
RGD PMID:7665913, PMID:8126111, PMID:9548375, PMID:21873635 MGI:MGI:1202196, MGI:MGI:76308, RGD:13792537 NCBI chr 1:151,012,598...151,106,802
Ensembl chr 1:151,012,598...151,106,802
JBrowse link
G Tyrp1 tyrosinase-related protein 1 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 5:98,387,291...98,406,083
Ensembl chr 5:98,387,291...98,406,083
JBrowse link
melanin biosynthetic process from tyrosine term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dct dopachrome tautomerase ISO (MGI:MGI:3690794|PMID:2169885) RGD PMID:2169885 MGI:MGI:3690794 NCBI chr15:103,208,174...103,245,033
Ensembl chr15:103,208,258...103,244,494
JBrowse link
melanin metabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl2 BCL2, apoptosis regulator ISO
IEA
MGI:MGI:2156165 (MGI:MGI:2154874|PMID:11709185)
GO_REF:0000107
RGD
Ensembl
PMID:11709185 GO_REF:0000107, MGI:MGI:2154874 NCBI chr13:26,605,426...26,769,374
Ensembl chr13:26,605,426...26,769,374
JBrowse link
G Myo5a myosin VA ISO MGI:MGI:1856004 (MGI:MGI:1202196|PMID:9548375) RGD PMID:9548375 MGI:MGI:1202196 NCBI chr 8:82,038,966...82,156,507
Ensembl chr 8:82,037,977...82,156,617
JBrowse link
G Tyrp1 tyrosinase-related protein 1 ISO MGI:MGI:1855960 (MGI:MGI:1202196|PMID:9548375) RGD PMID:9548375 MGI:MGI:1202196 NCBI chr 5:98,387,291...98,406,083
Ensembl chr 5:98,387,291...98,406,083
JBrowse link
G Vhl von Hippel-Lindau tumor suppressor ISO MGI:MGI:2136645 (MGI:MGI:5429122|PMID:22627278) RGD PMID:22627278 MGI:MGI:5429122 NCBI chr 4:145,580,869...145,587,835
Ensembl chr 4:145,580,799...145,587,845
JBrowse link
negative regulation of melanin biosynthetic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mfsd12 major facilitator superfamily domain containing 12 ISO (MGI:MGI:5912387|PMID:29025994) RGD PMID:29025994 MGI:MGI:5912387 NCBI chr 7:11,214,832...11,223,713
Ensembl chr 7:11,216,975...11,223,649
JBrowse link
G Opn3 opsin 3 ISO
IEA
(PMID:31097585)
GO_REF:0000107
RGD
Ensembl
PMID:31097585 GO_REF:0000107 NCBI chr13:93,716,481...93,746,994
Ensembl chr13:93,716,481...93,746,994
JBrowse link
G Rapgef2 Rap guanine nucleotide exchange factor 2 ISO
ISS
(MGI:MGI:5499726|PMID:16272156)
GO_REF:0000024
RGD
UniProt
PMID:16272156 GO_REF:0000024, MGI:MGI:5499726 NCBI chr 2:177,836,191...178,057,378
Ensembl chr 2:177,836,202...178,057,157
JBrowse link
G Slc24a5 solute carrier family 24 member 5 ISO (MGI:MGI:3775882|PMID:18166528) RGD PMID:18166528 MGI:MGI:3775882 NCBI chr 3:117,335,212...117,354,480
Ensembl chr 3:117,335,212...117,354,480
JBrowse link
G Wnt5a Wnt family member 5A ISO
IEA
(MGI:MGI:5619434|PMID:23569434)
GO_REF:0000107
RGD
Ensembl
PMID:23569434 GO_REF:0000107, MGI:MGI:5619434 NCBI chr16:4,469,451...4,490,271
Ensembl chr16:4,469,468...4,489,860
JBrowse link
phytoalexin metabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ddc dopa decarboxylase IEP scoparone RGD PMID:19185027 RGD:5128879 NCBI chr14:91,905,919...91,996,816
Ensembl chr14:91,905,919...91,996,774
JBrowse link
G Th tyrosine hydroxylase IEP scoparone RGD PMID:19185027 RGD:5128879 NCBI chr 1:216,073,034...216,080,287
Ensembl chr 1:216,073,031...216,080,287
JBrowse link
positive regulation of melanin biosynthetic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Appl1 adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1 ISO (PMID:21291857) RGD PMID:21291857 NCBI chr16:2,560,103...2,602,035
Ensembl chr16:2,563,520...2,602,103
JBrowse link
G Asip agouti signaling protein ISO
IBA
UniProtKB:P07147|UniProtKB:Q60696 (MGI:MGI:5294257|PMID:21949658)
PMID:21873635
RGD PMID:21949658, PMID:21873635 MGI:MGI:5294257, RGD:13792537 NCBI chr 3:150,492,010...150,579,870
Ensembl chr 3:150,574,473...150,579,870
JBrowse link
G Cdh3 cadherin 3 ISO (PMID:23334344) RGD PMID:23334344 NCBI chr19:38,668,957...38,719,801
Ensembl chr19:38,669,230...38,719,677
JBrowse link
G Gipc1 GIPC PDZ domain containing family, member 1 ISS
ISO
GO_REF:0000024
(PMID:21291857)
UniProt
RGD
PMID:21291857 GO_REF:0000024 NCBI chr19:24,786,604...24,798,231
Ensembl chr19:24,786,628...24,798,233
JBrowse link
G Opn3 opsin 3 ISO
IEA
(PMID:28842328)
GO_REF:0000107
RGD
Ensembl
PMID:28842328 GO_REF:0000107 NCBI chr13:93,716,481...93,746,994
Ensembl chr13:93,716,481...93,746,994
JBrowse link
G Pmel premelanosome protein ISO (MGI:MGI:5294257|PMID:21949658) RGD PMID:21949658 MGI:MGI:5294257 NCBI chr 7:3,133,347...3,143,827
Ensembl chr 7:3,133,506...3,143,911
JBrowse link
G Tyrp1 tyrosinase-related protein 1 ISO (PMID:21996312)
UniProtKB:Q03288|UniProtKB:Q60696 (MGI:MGI:5294257|PMID:21949658)
RGD PMID:21949658, PMID:21996312 MGI:MGI:5294257 NCBI chr 5:98,387,291...98,406,083
Ensembl chr 5:98,387,291...98,406,083
JBrowse link
regulation of melanin biosynthetic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc7a11 solute carrier family 7 member 11 ISO MGI:MGI:1857061 (MGI:MGI:3588610|PMID:16037214) RGD PMID:16037214 MGI:MGI:3588610 NCBI chr 2:139,453,774...139,528,479
Ensembl chr 2:139,453,774...139,528,162
JBrowse link
siderophore biosynthetic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bdh2 3-hydroxybutyrate dehydrogenase 2 ISO
IBA
ISS
(MGI:MGI:4820913|PMID:20550936)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:20550936, PMID:21873635 GO_REF:0000024, MGI:MGI:4820913, RGD:13792537 NCBI chr 2:240,461,505...240,482,149
Ensembl chr 2:240,461,505...240,482,145
JBrowse link
toxin biosynthetic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cyp1a2 cytochrome P450, family 1, subfamily a, polypeptide 2 ISO (PMID:11511187) RGD PMID:11511187 NCBI chr 8:62,451,360...62,458,244
Ensembl chr 8:62,451,329...62,458,301
JBrowse link
toxin metabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arl1 ADP-ribosylation factor like GTPase 1 ISO
ISS
(PMID:9624189)
GO_REF:0000024
RGD
UniProt
PMID:9624189 GO_REF:0000024 NCBI chr 7:29,282,411...29,293,455
Ensembl chr 7:29,282,305...29,293,399
JBrowse link
G As3mt arsenite methyltransferase IDA
IBA
ISO
IEA
PMID:11790780
PMID:21873635
(PMID:25997655)
GO_REF:0000107
RGD
Ensembl
PMID:25997655, PMID:11790780, PMID:21873635 GO_REF:0000107, RGD:625365, RGD:13792537 NCBI chr 1:266,482,787...266,514,570
Ensembl chr 1:266,482,858...266,514,569
JBrowse link
G Atn1 atrophin 1 ISO (MGI:MGI:2656131|PMID:12464607) RGD PMID:12464607 MGI:MGI:2656131 NCBI chr 4:157,267,394...157,281,199
Ensembl chr 4:157,267,901...157,274,755
Ensembl chr 9:157,267,901...157,274,755
JBrowse link
G Cyp1a1 cytochrome P450, family 1, subfamily a, polypeptide 1 ISO MGI:MGI:2182307 (MGI:MGI:3713192|PMID:17166882) RGD PMID:17166882 MGI:MGI:3713192 NCBI chr 8:62,472,087...62,478,122
Ensembl chr 8:62,472,095...62,478,147
JBrowse link
G Cyp1a2 cytochrome P450, family 1, subfamily a, polypeptide 2 ISO MGI:MGI:2182351 (MGI:MGI:3713192|PMID:17166882) RGD PMID:17166882 MGI:MGI:3713192 NCBI chr 8:62,451,360...62,458,244
Ensembl chr 8:62,451,329...62,458,301
JBrowse link
G Cyp1b1 cytochrome P450, family 1, subfamily b, polypeptide 1 IEA
ISO
GO_REF:0000107
MGI:MGI:2154690 (MGI:MGI:1333452|PMID:10051580), (MGI:MGI:3713192|PMID:17166882)
Ensembl
RGD
PMID:10051580, PMID:17166882 GO_REF:0000107, MGI:MGI:1333452, MGI:MGI:3713192 NCBI chr 6:2,308,179...2,316,739
Ensembl chr 6:2,307,808...2,316,722
JBrowse link
G Fmo1 flavin containing dimethylaniline monoxygenase 1 ISO (PMID:15144220) RGD PMID:15144220 NCBI chr13:80,712,885...80,745,095
Ensembl chr13:80,712,882...80,745,347
JBrowse link
G Fmo2 flavin containing dimethylaniline monoxygenase 2 ISO
IEA
(PMID:11744609)
GO_REF:0000107
RGD
Ensembl
PMID:11744609 GO_REF:0000107 NCBI chr13:80,752,526...80,775,264
Ensembl chr13:80,755,058...80,775,264
JBrowse link
G N6amt1 N-6 adenine-specific DNA methyltransferase 1 ISO (PMID:25997655) RGD PMID:25997655 NCBI chr11:27,004,335...27,016,690
Ensembl chr11:27,004,320...27,016,941
JBrowse link
G Pam peptidylglycine alpha-amidating monooxygenase IDA enhances lethality of scorpion neurotoxin BmK ITa1 RGD PMID:12721493 RGD:6483565 NCBI chr 9:111,028,543...111,177,588
Ensembl chr 9:111,028,575...111,177,602
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20028
    metabolic process 12271
      secondary metabolic process 61
        (+)-kotanin metabolic process + 0
        (17Z)-protosta-17(20),24-dien-3beta-ol metabolic process + 0
        N',N'',N'''-triacetylfusarinine C metabolic process + 0
        arugosin metabolic process + 0
        asperthecin metabolic process + 0
        brevianamide F metabolic process + 0
        cordyol C metabolic process + 0
        cspyrone B1 metabolic process + 0
        cyanogenic glycoside metabolic process + 0
        dehydroaustinol metabolic process + 0
        demethylkotanin metabolic process + 0
        diorcinol metabolic process + 0
        emericellamide metabolic process + 0
        emericellin metabolic process + 0
        emodin metabolic process + 0
        endocrocin metabolic process + 0
        ergot alkaloid metabolic process + 0
        fumagillin biosynthetic process + 0
        fumitremorgin B metabolic process + 0
        fumonisin metabolic process + 0
        gerfelin metabolic process + 0
        glycosinolate metabolic process + 0
        helvolic acid metabolic process + 0
        melanin metabolic process + 22
        monodictyphenone metabolic process + 0
        o-orsellinic acid metabolic process + 0
        ocellus pigment metabolic process + 0
        ochratoxin A metabolic process + 0
        orcinol metabolic process + 0
        orlandin metabolic process + 0
        penicillin metabolic process + 1
        phenylpropanoid metabolic process + 8
        pheromone metabolic process + 0
        phytochelatin metabolic process + 0
        polyketide metabolic process + 10
        regulation of secondary metabolic process + 12
        secondary metabolite biosynthetic process + 22
        secondary metabolite catabolic process + 0
        shamixanthone metabolic process + 0
        siderophore metabolic process + 1
        tensidol A metabolic process + 0
        tensidol B metabolic process + 0
        terrequinone A metabolic process + 0
        toxin metabolic process + 19
        verruculogen biosynthetic process 0
        violaceol I metabolic process + 0
        violaceol II metabolic process + 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.