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ONTOLOGY REPORT - ANNOTATIONS


Term:nitrogen utilization
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Accession:GO:0019740 term browser browse the term
Definition:A series of processes that forms an integrated mechanism by which a cell or an organism detects the depletion of primary nitrogen source, usually ammonia, and then activates genes to scavenge the last traces of the primary nitrogen source and to transport and metabolize alternative nitrogen sources. The utilization process begins when the cell or organism detects nitrogen levels, includes the activation of genes whose products detect, transport or metabolize nitrogen-containing substances, and ends when nitrogen is incorporated into the cell or organism's metabolism.



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nitrogen utilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lgsn lengsin, lens protein with glutamine synthetase domain NOT|involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:33,416,362...33,447,919
Ensembl chr 9:33,420,484...33,447,907
JBrowse link
ammonia assimilation cycle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Asl argininosuccinate lyase acts_upstream_of_or_within ISO MGI:3604881 (MGI:3604426|PMID:12559843) RGD PMID:12559843 MGI:3604426 NCBI chr12:26,659,664...26,677,136
Ensembl chr12:26,659,565...26,679,662
JBrowse link
G Glul glutamate-ammonia ligase TAS
IDA
RGD PMID:1674354 PMID:28323 RGD:632694, RGD:2301547 NCBI chr13:65,969,064...66,035,121
Ensembl chr13:66,025,630...66,035,108
JBrowse link
positive regulation of ammonia assimilation cycle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nr1h4 nuclear receptor subfamily 1, group H, member 4 involved_in ISO
IEA
(MGI:5306122|PMID:21757002)
GO_REF:0000107
RGD
Ensembl
PMID:21757002 GO_REF:0000107 MGI:5306122 NCBI chr 7:23,846,122...23,942,085
Ensembl chr 7:23,846,122...23,942,047
JBrowse link
regulation of nitrogen utilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bax BCL2 associated X, apoptosis regulator acts_upstream_of_or_within ISO MGI:88138 (MGI:894988|PMID:9241272) RGD PMID:9241272 MGI:894988 NCBI chr 1:95,940,001...95,945,407
Ensembl chr 1:95,938,808...95,945,368
JBrowse link
G Bcl2 BCL2, apoptosis regulator acts_upstream_of_or_within ISO MGI:99702 (MGI:894988|PMID:9241272) RGD PMID:9241272 MGI:894988 NCBI chr13:22,689,783...22,853,920
Ensembl chr13:22,684,989...22,853,743
Ensembl chr13:22,684,989...22,853,743
JBrowse link

Term paths to the root
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Term Annotations click to browse term
  biological_process 19874
    response to stimulus 10557
      response to external stimulus 3293
        response to extracellular stimulus 819
          response to nutrient levels 788
            nitrogen utilization 6
              ammonia assimilation cycle + 3
              negative regulation of nitrogen utilization + 0
              positive regulation of nitrogen utilization + 1
              regulation of nitrogen utilization + 3
paths to the root