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ONTOLOGY REPORT - ANNOTATIONS

Term:nitrogen utilization
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Accession:GO:0019740 term browser browse the term
Definition:A series of processes that forms an integrated mechanism by which a cell or an organism detects the depletion of primary nitrogen source, usually ammonia, and then activates genes to scavenge the last traces of the primary nitrogen source and to transport and metabolize alternative nitrogen sources. The utilization process begins when the cell or organism detects nitrogen levels, includes the activation of genes whose products detect, transport or metabolize nitrogen-containing substances, and ends when nitrogen is incorporated into the cell or organism's metabolism.


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nitrogen utilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lgsn lengsin, lens protein with glutamine synthetase domain NOT|involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 9:33,416,362...33,447,919
Ensembl chr 9:33,420,484...33,447,907 		JBrowse link
ammonia assimilation cycle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Asl argininosuccinate lyase involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:3604881 (PMID:12559843)		 Ensembl
RGD		 PMID:12559843 GO_REF:0000107 NCBI chr12:26,659,664...26,677,136
Ensembl chr12:26,659,565...26,679,662 		JBrowse link
G Glul glutamate-ammonia ligase IDA RGD PMID:28323 RGD:2301547 NCBI chr13:65,969,053...66,035,121
Ensembl chr13:66,025,630...66,035,108 		JBrowse link
positive regulation of ammonia assimilation cycle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nr1h4 nuclear receptor subfamily 1, group H, member 4 involved_in IEA
ISO		 GO_REF:0000107
(PMID:21757002)		 Ensembl
RGD		 PMID:21757002 GO_REF:0000107 NCBI chr 7:23,846,122...23,942,085
Ensembl chr 7:23,846,122...23,942,047 		JBrowse link
regulation of nitrogen utilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bax BCL2 associated X, apoptosis regulator acts_upstream_of_or_within ISO MGI:88138 (PMID:9241272) RGD PMID:9241272 NCBI chr 1:95,940,001...95,945,407
Ensembl chr 1:95,938,808...95,945,368 		JBrowse link
G Bcl2 BCL2, apoptosis regulator involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:99702 (PMID:9241272)		 Ensembl
RGD		 PMID:9241272 GO_REF:0000107 NCBI chr13:22,689,783...22,853,920
Ensembl chr13:22,684,989...22,853,743
Ensembl chr13:22,684,989...22,853,743 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20537
    response to stimulus 11005
      response to nutrient levels 852
        nitrogen utilization 6
          ammonia assimilation cycle + 3
          negative regulation of nitrogen utilization + 0
          positive regulation of nitrogen utilization + 1
          regulation of nitrogen utilization + 3
Path 2
Term Annotations click to browse term
  biological_process 20537
    homeostatic process 2014
      cellular homeostasis 985
        intracellular chemical homeostasis 873
          intracellular nitrogen homeostasis 6
            nitrogen utilization 6
              ammonia assimilation cycle + 3
              negative regulation of nitrogen utilization + 0
              positive regulation of nitrogen utilization + 1
              regulation of nitrogen utilization + 3
paths to the root