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ONTOLOGY REPORT - ANNOTATIONS


Term:nitrogen utilization
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Accession:GO:0019740 term browser browse the term
Definition:A series of processes that forms an integrated mechanism by which a cell or an organism detects the depletion of primary nitrogen source, usually ammonia, and then activates genes to scavenge the last traces of the primary nitrogen source and to transport and metabolize alternative nitrogen sources. The utilization process begins when the cell or organism detects nitrogen levels, includes the activation of genes whose products detect, transport or metabolize nitrogen-containing substances, and ends when nitrogen is incorporated into the cell or organism's metabolism.


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nitrogen utilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lgsn lengsin, lens protein with glutamine synthetase domain NOT IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:37,458,603...37,490,117
Ensembl chr 9:37,462,693...37,490,108
JBrowse link
ammonia assimilation cycle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Asl argininosuccinate lyase IEA
ISO
GO_REF:0000107
MGI:3604881 (MGI:3604426|PMID:12559843)
Ensembl
RGD
PMID:12559843 GO_REF:0000107, MGI:3604426 NCBI chr12:30,160,922...30,178,348
Ensembl chr12:30,165,694...30,178,341
JBrowse link
G Glul glutamate-ammonia ligase TAS
IDA
RGD PMID:1674354, PMID:28323 RGD:632694, RGD:2301547 NCBI chr13:71,331,052...71,340,207
Ensembl chr13:71,331,052...71,340,229
JBrowse link
positive regulation of ammonia assimilation cycle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nr1h4 nuclear receptor subfamily 1, group H, member 4 IEA
ISO
GO_REF:0000107
(MGI:5306122|PMID:21757002)
Ensembl
RGD
PMID:21757002 GO_REF:0000107, MGI:5306122 NCBI chr 7:30,003,429...30,162,095
Ensembl chr 7:30,003,429...30,162,056
JBrowse link
regulation of nitrogen utilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bax BCL2 associated X, apoptosis regulator IEA
ISO
GO_REF:0000107
MGI:88138 (MGI:894988|PMID:9241272)
Ensembl
RGD
PMID:9241272 GO_REF:0000107, MGI:894988 NCBI chr 1:101,451,801...101,457,207
Ensembl chr 1:101,451,802...101,457,207
JBrowse link
G Bcl2 BCL2, apoptosis regulator IEA
ISO
GO_REF:0000107
MGI:99702 (MGI:894988|PMID:9241272)
Ensembl
RGD
PMID:9241272 GO_REF:0000107, MGI:894988 NCBI chr13:26,605,426...26,769,374
Ensembl chr13:26,605,426...26,769,374
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20030
    nitrogen utilization 6
      ammonia assimilation cycle + 3
      negative regulation of nitrogen utilization + 0
      positive regulation of nitrogen utilization + 1
      regulation of nitrogen utilization + 3
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.